Sed0001006 (gene) Chayote v1

Overview


Name	Sed0001006
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DNA polymerase
Location	LG04: 5166429 .. 5170964 (-)
RNA-Seq Expression	Sed0001006
Synteny	Sed0001006

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCAAAGCGAAGCAAGAGCCAAAATGTTCCTCAGGATCCACATGGAATGTTTGCAGGAATGGTTGTGTTCTTAATCGAAAAGGGGGTCCAGGCCCGCCGATTGCAGGTTAGGGTTTTCAATATTATTGTTATCTTTCTCTGCAACTTTTTGTGTTTCAATGAATTTATTAAGAGTATTGGTTTTTTGTGGTTGAAGATTTGGAAACAGAAGTTGCTCCAAATGGGTGCCATCGTTGAAGAACGTTTGTCCAAAAGGGTCAGCCATATCTTTGCTGCAAGCTCGGAAGCTCTTCTGCAAAAAGTGAAAGGTGAGCGTTTGGCTCGCTTTGAAGGGGTAAGTTTGAGAATGGTTACTGGTATTTAATTCTGTTGTCTTGAAGGGCATATAAGAAAAACTTTGTTTTCTTCTCTTGGGTATTTGAAGTTTATGAATGTCGAGATATGCCTTACGATTACTTAGTTGGGGTCTCGCTGCCTGGTAATCGAGCGAGGCTTTGAGGATTTTATGAGAATCCACCGTATAAACACTCTTAAAATCCTAGCCCCATCTACATATTCTGTTTATACTCGTGGATGTAGCTAACACCATTAGTGAACTCCGTAAATTCTTAGTATTTTCTCTCCCATTCTTTTACCGTTTTCTCTTTGATTGTTGTTGCCGTTTTTGTAACAATGAACTAGGCTAATTGGTCCGTATTTTCAGAAAGTTCTCTCATTCCAGTGGCTAGAAGACAGCTTAAGTTCAGGGGAGAAGGCATCAGAGGATTTATACATTGTGGAAGCGGGTTTAGGTGAGGAAAGTGGAAAAGATGAGCCGCAACCGTCTGTTTCCAAAAAACTAAAATTGTCTCCCAACAATTTGGAAGCAGTAAGTGTTGAAAGTGAAGGGGAGTCAAATGCTTCAAGCTTGGTAACTAAGACTGCTACGGGTCTTGACAACTCTAAATTGAAGATGGATCAAACAGTGACTAGTCCAAGGACTTCTGAATATATTATTAGCAATGTAAGTTTCTTTGAATGTGTTCGACGTTTGATGTTGAAATGTGTTTGATCCTGTTTTAGTTGCCAATATGTTCTTCCTTCACTAGATGTATTGTGTTAGGAATTTGCTCGCTAGTTCATAAATTAGGAAAGTTTCTTTGTAGATATGTGGCTTGACCATGGAAGTCTTAAAAATAATTTCCGGTTTTCTGTAGATCGCTAACCACCATGGGTAGCCTAGTGGTCAAAACGATATTAAAAAAATAAATATGTTGTGGGTTTAATCTATGGTGGCCACCTATTTAGGAATTAATTTCCTACGGGTTTCCTTGACATCCAAATGCTGGTCAAGCAGTATGTCTCATGACAATAGTCGTGTCCTGCAAGCTTGTCCGGACACTCGTGGATATTAAAAAAACAAAAAAGTTTTTTGTAGACTGCTCTCATCTAAATTAATCATTTTGGTCTAATTAGATGAAAATTTTGCAGACATCTATGTCATACAGTCCACCCGATATGAATCGGAACATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGGTGAGAAGAACATCCTTTACACTACTTGGCTGTTCCTGTTTCCACACTTTAGTTTCTGATGGATTGTCTTATATTTCAAGCATTGGGTGATGATCGAAGGTCGTTTAGCTATTTCAAGGCCATTCCAGTAATTGAGAAGCTGCCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCAGCAATAGGAAAGTCATTGCAGGATCATGTCAGTGAAACAACCGTAGTTCCAAATTTCTAACTTTCATCTATCATCTTTATCTATTGACGCATTGCATTATGTTGTATTTTTCTTTTCTTCACTCCATTGGCCTCCTTTATTTTGGGTGGAACTCAGTAATCATTGTACTTATATGGTACACTGCCTTATAAGTTACCCATCAATCTGCTTGTTCATAGTGTGGCTAGGTTATTTTTGGAACTGAGATCTCGACTTGAAATCGCTTCAACCTCTGCAGGAGTTCATAGGAAATCCATCTTGACGTGGGAGGATGGGGACATGACCTTGTGTGAATAATATGGTCCAAAATGCTTTGCAATTTGTATATGAATAGTAACATTTCTAAAAACTAAATACTTTGCATCTGACCTGCCAAAGTAGTTTTGACAAGTATGTGGATTGATTACAGAAGATTGTCTGTCGTCTTGCAGATTCAAGAGATAGTGACTAGTGGGAAATTATCAAAGTTGGAGCACTTTGAAACAGATGAAAAGGTGTTTTCAGGTTTTGAAGAAAACCTCAGACCTTCCCTCTGATGAATATCACCAATTTGCATCTACACGTTTATCTTTCTAAGCAGTGATGATCAATGCGTCATTATTTTTCTCCTTATTTACATTTTATAGCTTGTACTGTATTTTTATCCATTGTAGGTCCGGACAATCTCACTTTTTGGGGAAGTATGGGGTATTGGTCCAGCCACGGCTTTGCGATTGTATGACAAAGGATATAGGACTCTTGATGACTTGCAGAACGAGGAGTCATTAACCCATGCACAGAAAATAGGGTTGAAATATTTTGATGATATTAAGCAGAGAATTCCTTGCAATGAGGTCAGCTGCTTTACTCTTGTTGATTTTTCAACCGCAGCTGATCTTTTGGGTAAAAATGTGTTCTCATATTTCTAAAATCCATCTGATTTGATAGGTTCAGGACATGGAAAGCCTTCTAAAGAAGGCTGGGGAAGATGTTTTGCCAGGGGTGAGAATGAAGCACTTCCTTAAAATCTGAATCTGAAAATATTGTGATTAGCTGATGTCGTGTACTTTCGCGTAAATTCTATGAATAATCCATAACTCAGATGGTTTATGATTTATTTCTTTCAGTTGCATTACTTTGAAGTGCTTATATTGACATTTTTTTGCTTCAGGTTCTTATTCTGTGTGGAGGGTCATTTCGAAGAGGGAAGTCTTCCTGTGGAGATATGGACATTGTAATCACACATCCTGATGGGAAAAGGTTTCAAACATTGCCCCCCTGTCTTATATTTCTTTCTGTATTAGTACTCCTAAATCATGTTTTAGTTGAATGTCTTGATTATGAAATGTGAAGATAAAGCAGGTCAAATGATTACATATCATCTAATTTTGGATTAAAAATTAATCAATGGTTTAACTATATAAGATGGTTTAAGGAGTTTGCTTTCATCATTCTGAAGTTTTCCATTGCATTTTATCTTGTGTTTCATGAACATGATCATGATGATGTCCATTCCAGTTCAATGCATCTATAGTATTCTTTGCTCTGGCATCCCAATGTACATTTCGGATTCGGTCCATTTGATTTATAGTTACTTGAAAATTATTTTCTATGTATTTCCAGCCATAGAGGTTTTCTACCAAGATTTGTCAAGCATTTGAAGGATATGAAGTTTTTAAGGGAGGATCTTGTATTCAGCACCCACAGTGAGGAGGTCAAATTGCACATTCCCCTATGTTTAAACAGCTTATGGTTACTAGATGCCATTTCATGCTTTTCTCATCCCTTTTGTTTGTTTCAATTGTGAAACCATGAACAGGGAACTGATTCTGGTGTTGACACGTATTTTGGCCTCTGCACGTATCCCGGAAGAGAATTACGACGCAGAATAGATCTCAAGGCATAAGTTCTCTTTTTCTTTAGACATTACTTATTTAGAATAGAATGATAACTTTGAGATAGGTTGTTGGAAAAGTAGTGGTAGAACAGAACCAAATCCATGTTCAGTAAACAACTGCTATTTGCTGTCTAGCGTTGCGCCCTCCTCCAAAGGGTACCGAACCATCGATGACTTGGGTGTTTCGTGATATCGACATTAATCTCTTATTGTTCAAATTCGAAAGAAATATCTTAATTTCTTTTCTCACTTCTCAACAGAAAAGTTTTAGAAATTATGTCCATAATTCTTTTAAACCTATGTTTTTTACTCTTCTAGGTGTATCCAAGAGACATATATGCATTCGGTTTGATAGCGTGGACGGGAAACGATGTACTAAACAGGAGGTATGAGCTTCTGTAGCTAATCTATCTGACATTTCAAATAGTTTTCGTTAATGATGTTGCTTACAAATCAAATATATGACGCTGAGACTTCAATTGTGATAAGTAACGACAGCGTGCATTTCGACGTTAGAGAACATCGCTTAACCGTCTCCCCAGCTTCTGTTTTCAAATGTATGTTCGTTTGACAGTATAAAATGCAATGTTGTTCAAGGATTTTGTTTTGTGTTTGCAGGCTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCCGGTGGTAAAAGGGTAATTTTCTATGGCTTAGAGGGAATATGGCCTTAAAATATAGGACTACCCCTAACTCCTTTGTTGATGATTATGCTTCAGGGTGCAAAAGGAAGTGCAACTTTGAAGATTGATACTGAAAAAGAAGTTTTTGAGTTCCTTGGGTTCCCATGGCTGGAACCCCATGAAAGAAATCTGTGA

mRNA sequence

ATGGCGCCAAAGCGAAGCAAGAGCCAAAATGTTCCTCAGGATCCACATGGAATGTTTGCAGGAATGGTTGTGTTCTTAATCGAAAAGGGGGTCCAGGCCCGCCGATTGCAGATTTGGAAACAGAAGTTGCTCCAAATGGGTGCCATCGTTGAAGAACGTTTGTCCAAAAGGGTCAGCCATATCTTTGCTGCAAGCTCGGAAGCTCTTCTGCAAAAAGTGAAAGGTGAGCGTTTGGCTCGCTTTGAAGGGAAAGTTCTCTCATTCCAGTGGCTAGAAGACAGCTTAAGTTCAGGGGAGAAGGCATCAGAGGATTTATACATTGTGGAAGCGGGTTTAGGTGAGGAAAGTGGAAAAGATGAGCCGCAACCGTCTGTTTCCAAAAAACTAAAATTGTCTCCCAACAATTTGGAAGCAGTAAGTGTTGAAAGTGAAGGGGAGTCAAATGCTTCAAGCTTGGTAACTAAGACTGCTACGGGTCTTGACAACTCTAAATTGAAGATGGATCAAACAGTGACTAGTCCAAGGACTTCTGAATATATTATTAGCAATACATCTATGTCATACAGTCCACCCGATATGAATCGGAACATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGCATTGGGTGATGATCGAAGGTCGTTTAGCTATTTCAAGGCCATTCCAGTAATTGAGAAGCTGCCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCAGCAATAGGAAAGTCATTGCAGGATCATATTCAAGAGATAGTGACTAGTGGGAAATTATCAAAGTTGGAGCACTTTGAAACAGATGAAAAGGTCCGGACAATCTCACTTTTTGGGGAAGTATGGGGTATTGGTCCAGCCACGGCTTTGCGATTGTATGACAAAGGATATAGGACTCTTGATGACTTGCAGAACGAGGAGTCATTAACCCATGCACAGAAAATAGGGTTGAAATATTTTGATGATATTAAGCAGAGAATTCCTTGCAATGAGGTTCAGGACATGGAAAGCCTTCTAAAGAAGGCTGGGGAAGATGTTTTGCCAGGGGTTCTTATTCTGTGTGGAGGGTCATTTCGAAGAGGGAAGTCTTCCTGTGGAGATATGGACATTGTAATCACACATCCTGATGGGAAAAGCCATAGAGGTTTTCTACCAAGATTTGTCAAGCATTTGAAGGATATGAAGTTTTTAAGGGAGGATCTTGTATTCAGCACCCACAGTGAGGAGGGAACTGATTCTGGTGTTGACACGTATTTTGGCCTCTGCACGTATCCCGGAAGAGAATTACGACGCAGAATAGATCTCAAGGTGTATCCAAGAGACATATATGCATTCGGTTTGATAGCGTGGACGGGAAACGATGTACTAAACAGGAGGCTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCCGGTGGTAAAAGGGGTGCAAAAGGAAGTGCAACTTTGAAGATTGATACTGAAAAAGAAGTTTTTGAGTTCCTTGGGTTCCCATGGCTGGAACCCCATGAAAGAAATCTGTGA

Coding sequence (CDS)

ATGGCGCCAAAGCGAAGCAAGAGCCAAAATGTTCCTCAGGATCCACATGGAATGTTTGCAGGAATGGTTGTGTTCTTAATCGAAAAGGGGGTCCAGGCCCGCCGATTGCAGATTTGGAAACAGAAGTTGCTCCAAATGGGTGCCATCGTTGAAGAACGTTTGTCCAAAAGGGTCAGCCATATCTTTGCTGCAAGCTCGGAAGCTCTTCTGCAAAAAGTGAAAGGTGAGCGTTTGGCTCGCTTTGAAGGGAAAGTTCTCTCATTCCAGTGGCTAGAAGACAGCTTAAGTTCAGGGGAGAAGGCATCAGAGGATTTATACATTGTGGAAGCGGGTTTAGGTGAGGAAAGTGGAAAAGATGAGCCGCAACCGTCTGTTTCCAAAAAACTAAAATTGTCTCCCAACAATTTGGAAGCAGTAAGTGTTGAAAGTGAAGGGGAGTCAAATGCTTCAAGCTTGGTAACTAAGACTGCTACGGGTCTTGACAACTCTAAATTGAAGATGGATCAAACAGTGACTAGTCCAAGGACTTCTGAATATATTATTAGCAATACATCTATGTCATACAGTCCACCCGATATGAATCGGAACATAACTGAGATTTTTGGAAAACTTATCAACATATACAGAGCATTGGGTGATGATCGAAGGTCGTTTAGCTATTTCAAGGCCATTCCAGTAATTGAGAAGCTGCCTTTTAAAATTGAGAGCATTGATCAGGTCAAACACCTGCCAGCAATAGGAAAGTCATTGCAGGATCATATTCAAGAGATAGTGACTAGTGGGAAATTATCAAAGTTGGAGCACTTTGAAACAGATGAAAAGGTCCGGACAATCTCACTTTTTGGGGAAGTATGGGGTATTGGTCCAGCCACGGCTTTGCGATTGTATGACAAAGGATATAGGACTCTTGATGACTTGCAGAACGAGGAGTCATTAACCCATGCACAGAAAATAGGGTTGAAATATTTTGATGATATTAAGCAGAGAATTCCTTGCAATGAGGTTCAGGACATGGAAAGCCTTCTAAAGAAGGCTGGGGAAGATGTTTTGCCAGGGGTTCTTATTCTGTGTGGAGGGTCATTTCGAAGAGGGAAGTCTTCCTGTGGAGATATGGACATTGTAATCACACATCCTGATGGGAAAAGCCATAGAGGTTTTCTACCAAGATTTGTCAAGCATTTGAAGGATATGAAGTTTTTAAGGGAGGATCTTGTATTCAGCACCCACAGTGAGGAGGGAACTGATTCTGGTGTTGACACGTATTTTGGCCTCTGCACGTATCCCGGAAGAGAATTACGACGCAGAATAGATCTCAAGGTGTATCCAAGAGACATATATGCATTCGGTTTGATAGCGTGGACGGGAAACGATGTACTAAACAGGAGGCTGAGATTACTAGCAGAATCAAAAGGATTTAGGCTGGATGATACTGGACTTTATCCATCTACTCAGGGATCCGGTGGTAAAAGGGGTGCAAAAGGAAGTGCAACTTTGAAGATTGATACTGAAAAAGAAGTTTTTGAGTTCCTTGGGTTCCCATGGCTGGAACCCCATGAAAGAAATCTGTGA

Protein sequence

MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSHIFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDEPQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYIISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGYRTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGSFRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDTYFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL

Homology

[Close]

BLAST of Sed0001006 vs. NCBI nr
Match: XP_008446253.1 (PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446254.1 PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446255.1 PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo])

HSP 1 Score: 924.5 bits (2388), Expect = 4.1e-265
Identity = 458/522 (87.74%), Postives = 493/522 (94.44%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKR KSQ++ +DPHGMFAGMVVFL+EKGVQ RRLQIWKQKL+QMGA +EERLSK VSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFA+SS+ALL+KV   RLARF+GKVLS+QWLEDSLSSGEKASEDLY V+ GL +E G+D 
Sbjct: 61  IFASSSDALLEKVDSARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGL-DEDGRDN 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQ S  KKLKLSPNN EAVS ES G+S+AS+LVTKTATGL++SKL + QTVTSPRTS  +
Sbjct: 121 PQQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASV 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            +NTS+SYSPPDMN+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPFKIESIDQV
Sbjct: 181 GNNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKSLQDHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLY+KGY
Sbjct: 241 KHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGY 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDLQ EESLTHAQK+GLKYFDDIKQRIP NEVQDME+LLKKAGEDVLPGV ILCGGS
Sbjct: 301 RTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFLP++VKHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           PSTQGSGGKRGA+G+ATLK DTEKEVFEFLGFPWLEPHERNL
Sbjct: 481 PSTQGSGGKRGARGTATLKFDTEKEVFEFLGFPWLEPHERNL 521

[Close]

BLAST of Sed0001006 vs. NCBI nr
Match: XP_004135473.1 (DNA polymerase lambda isoform X1 [Cucumis sativus] >KGN51838.1 hypothetical protein Csa_008261 [Cucumis sativus])

HSP 1 Score: 921.4 bits (2380), Expect = 3.5e-264
Identity = 454/522 (86.97%), Postives = 494/522 (94.64%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKR KSQ++ +DPHGMFAGMVVFL+EKGVQ RRLQIWKQKL+QMGA +EERLSK VSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFA+S +ALL+KV G RLARF+GKVLS+QWLEDSLSSGEKASEDLY V+ GL +E G+D+
Sbjct: 61  IFASSLDALLEKVDGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGL-DEDGRDK 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQ S  KKL LSPNN EAVS ES G+S+AS+LVTKTATGL++SKL + QTVTSPRTS+++
Sbjct: 121 PQQSTPKKLNLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFV 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            +N ++SYSPPDMN+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPF+IESIDQV
Sbjct: 181 GNNIALSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKSLQDHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLY+KGY
Sbjct: 241 KHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGY 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDLQ EESLTHAQK+GLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGV ILCGGS
Sbjct: 301 RTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFLP++VKHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           PSTQGSGGKRGA+G+ATLK DTEK+VFEFLGFPWLEPHERNL
Sbjct: 481 PSTQGSGGKRGARGTATLKFDTEKDVFEFLGFPWLEPHERNL 521

[Close]

BLAST of Sed0001006 vs. NCBI nr
Match: XP_008446256.1 (PREDICTED: DNA polymerase beta isoform X2 [Cucumis melo])

HSP 1 Score: 918.3 bits (2372), Expect = 3.0e-263
Identity = 457/522 (87.55%), Postives = 492/522 (94.25%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKR KSQ++ +DPHGMFAGMVVFL+EKGVQ RRLQIWKQKL+QMGA +EERLSK VSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFA+SS+ALL+KV   RLARF+G VLS+QWLEDSLSSGEKASEDLY V+ GL +E G+D 
Sbjct: 61  IFASSSDALLEKVDSARLARFKG-VLSYQWLEDSLSSGEKASEDLYTVKVGL-DEDGRDN 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQ S  KKLKLSPNN EAVS ES G+S+AS+LVTKTATGL++SKL + QTVTSPRTS  +
Sbjct: 121 PQQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASV 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            +NTS+SYSPPDMN+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPFKIESIDQV
Sbjct: 181 GNNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKSLQDHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLY+KGY
Sbjct: 241 KHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGY 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDLQ EESLTHAQK+GLKYFDDIKQRIP NEVQDME+LLKKAGEDVLPGV ILCGGS
Sbjct: 301 RTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFLP++VKHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           PSTQGSGGKRGA+G+ATLK DTEKEVFEFLGFPWLEPHERNL
Sbjct: 481 PSTQGSGGKRGARGTATLKFDTEKEVFEFLGFPWLEPHERNL 520

[Close]

BLAST of Sed0001006 vs. NCBI nr
Match: XP_011655646.1 (DNA polymerase lambda isoform X2 [Cucumis sativus])

HSP 1 Score: 915.2 bits (2364), Expect = 2.5e-262
Identity = 453/522 (86.78%), Postives = 493/522 (94.44%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKR KSQ++ +DPHGMFAGMVVFL+EKGVQ RRLQIWKQKL+QMGA +EERLSK VSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFA+S +ALL+KV G RLARF+G VLS+QWLEDSLSSGEKASEDLY V+ GL +E G+D+
Sbjct: 61  IFASSLDALLEKVDGARLARFKG-VLSYQWLEDSLSSGEKASEDLYTVKVGL-DEDGRDK 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQ S  KKL LSPNN EAVS ES G+S+AS+LVTKTATGL++SKL + QTVTSPRTS+++
Sbjct: 121 PQQSTPKKLNLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFV 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            +N ++SYSPPDMN+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPF+IESIDQV
Sbjct: 181 GNNIALSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKSLQDHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLY+KGY
Sbjct: 241 KHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGY 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDLQ EESLTHAQK+GLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGV ILCGGS
Sbjct: 301 RTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFLP++VKHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           PSTQGSGGKRGA+G+ATLK DTEK+VFEFLGFPWLEPHERNL
Sbjct: 481 PSTQGSGGKRGARGTATLKFDTEKDVFEFLGFPWLEPHERNL 520

[Close]

BLAST of Sed0001006 vs. NCBI nr
Match: XP_038892425.1 (DNA polymerase lambda isoform X1 [Benincasa hispida])

HSP 1 Score: 913.3 bits (2359), Expect = 9.6e-262
Identity = 452/522 (86.59%), Postives = 491/522 (94.06%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKR KS+N+  DPHGMF GM+VFL+EKGVQARRLQIWKQKL+QMGA +EERLSK VSH
Sbjct: 1   MAPKRRKSENLSGDPHGMFEGMIVFLVEKGVQARRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFAASS+ALLQKV G RLARF+GKVLS+QWLEDSLSSGEKASEDLY V+  L +E  +D+
Sbjct: 61  IFAASSDALLQKVNGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVRL-DEDVRDK 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQ  +SKKLKLSPNN EAVS E+ G+S+AS+LVTKTATGL++SKL +DQTVTSPRTS+  
Sbjct: 121 PQLFISKKLKLSPNNSEAVSSENGGDSDASTLVTKTATGLEDSKLSIDQTVTSPRTSDSK 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            SNTS+SYSPPDMN+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPFKIES D+V
Sbjct: 181 NSNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESSDRV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKS QDHIQEIV++GKLSKLEHFE DEKVRTISLFGEVWGIGPATALRLY+KGY
Sbjct: 241 KHLPAIGKSFQDHIQEIVSTGKLSKLEHFEADEKVRTISLFGEVWGIGPATALRLYEKGY 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDL+ EESLTHAQK+GLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGV ILCGGS
Sbjct: 301 RTLDDLKKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFLP+++KHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPKYIKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           PSTQGSGGKRGA+G+ATLK DTEKE+FEFLGFPWLEPHERNL
Sbjct: 481 PSTQGSGGKRGARGTATLKFDTEKEIFEFLGFPWLEPHERNL 521

[Close]

BLAST of Sed0001006 vs. ExPASy Swiss-Prot
Match: Q9FNY4 (DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 3.5e-206
Identity = 353/533 (66.23%), Postives = 436/533 (81.80%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEE-RLSKRVS 60
           MA KR ++++   DP GMFAGMVVF++E GVQ RRLQIWKQKL+QMGA++EE R++K+V+
Sbjct: 1   MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT 60

Query: 61  HIFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGK- 120
           H+ A + EALL K   ERL+ F  +++ +QWLEDSL+SGEKA+EDLY+++    EE  K 
Sbjct: 61  HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKID-SEEVDKP 120

Query: 121 ---------DEPQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQ 180
                     E Q S  K+ + SP+  +   VES   +  S   + T+  + ++     +
Sbjct: 121 KKSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSP-DSPTSCSVPSTSASPGE 180

Query: 181 TVTSPRTSEYIISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEK 240
            +    TS    S ++  Y PPD+NRNITEIFGKLINIYRALG+DRRSFSY+KAIPVIEK
Sbjct: 181 GIAETPTSPQ--SESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEK 240

Query: 241 LPFKIESIDQVKHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGP 300
            P +IES+DQ+KHLP IGK+++DHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWG+GP
Sbjct: 241 FPTRIESVDQLKHLPGIGKAMRDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGP 300

Query: 301 ATALRLYDKGYRTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDV 360
           ATAL+LY+KG+RTL+DL+NE+SLTHAQK+GLKYFDDIK RIP  EVQ+ME LL++ GE+ 
Sbjct: 301 ATALKLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEET 360

Query: 361 LPGVLILCGGSFRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTH 420
           LPGV I+CGGS+RRGK++CGD+DIV+THPDG+SH+GFL +FVK LK+M FLREDL+FSTH
Sbjct: 361 LPGVNIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFSTH 420

Query: 421 SEEGTDSGVDTYFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAES 480
           SEEGTDSGVDTYFGLCTYPG+ELRRRID KVYPRDIY+FGLIAWTGNDVLNRRLRLLAES
Sbjct: 421 SEEGTDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAES 480

Query: 481 KGFRLDDTGLYPSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           KG+RLDDTGL+P+T  S G RGA+G+A+LK+ TEK+VF+FLGFPWLEPHERNL
Sbjct: 481 KGYRLDDTGLFPATHSSSGNRGARGTASLKLSTEKQVFDFLGFPWLEPHERNL 529

[Close]

BLAST of Sed0001006 vs. ExPASy Swiss-Prot
Match: Q67VC8 (DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 2.0e-185
Identity = 335/552 (60.69%), Postives = 414/552 (75.00%), Query Frame = 0


Query: 1   MAPKR---SKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKR 60
           MAPKR   +++     DP GMF G+  F++   VQ+RRL++WKQ+L QMG  V+E+L+ +
Sbjct: 1   MAPKRKPPARAAAAKLDPDGMFRGVSAFVVPHAVQSRRLEVWKQRLAQMGGRVQEKLAAK 60

Query: 61  -----VSHIFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGL 120
                V+H+ AA ++ALL+++    L RF G V+SF+WLE+ L SGE+  E  + +    
Sbjct: 61  GGGGAVTHVLAADAKALLRELDAAWLHRFRGSVVSFEWLEECLKSGERLPEHKFAINY-- 120

Query: 121 GEESGKDEPQPSV--------SKKLKLS---PNNLEAV------SVESEGESNASSLVTK 180
            EE  K + +           +K+ K+S   P N +        S ++    N  S V K
Sbjct: 121 -EEEFKPKKEGGAAGSGVLQSAKRSKISSDGPENRKETAGGNRESRDAIAHPNEDSDVVK 180

Query: 181 ---TATGLDNSKLKMDQTVTSPRT--SEYIISNTSMSYSPPDMNRNITEIFGKLINIYRA 240
              T T   ++     +T+ S     +E   S  S +Y+PPD+NRNITEIFGKLINIYRA
Sbjct: 181 GPSTCTSSQSASGDSKETIASQNAFKAEEASSGESSTYAPPDLNRNITEIFGKLINIYRA 240

Query: 241 LGDDRRSFSYFKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDHIQEIVTSGKLSKLEHFE 300
           LGDDRRSFSY+KAIPVIEKLPFKIES DQVK LPAIGKSL+DHI EIV +GKLSKLEHFE
Sbjct: 241 LGDDRRSFSYYKAIPVIEKLPFKIESADQVKDLPAIGKSLKDHINEIVNTGKLSKLEHFE 300

Query: 301 TDEKVRTISLFGEVWGIGPATALRLYDKGYRTLDDLQNEESLTHAQKIGLKYFDDIKQRI 360
            DEKVRT+SLFGEVWG+GPATAL+LYDKG+RTLDDLQ ++SLT AQ+IGLK+FDDIKQRI
Sbjct: 301 NDEKVRTVSLFGEVWGVGPATALKLYDKGHRTLDDLQKDDSLTSAQRIGLKFFDDIKQRI 360

Query: 361 PCNEVQDMESLLKKAGEDVLPGVLILCGGSFRRGKSSCGDMDIVITHPDGKSHRGFLPRF 420
           P +EV +ME LL++ G D+LPGV+I+CGGS+RRGKSSCGDMDI+ITHPDG+SH GFLP+F
Sbjct: 361 PRHEVSEMEKLLQEVGTDILPGVIIVCGGSYRRGKSSCGDMDIIITHPDGESHVGFLPKF 420

Query: 421 VKHLKDMKFLREDLVFSTHSEEGTDSGVDTYFGLCTYPGRELRRRIDLKVYPRDIYAFGL 480
           V+ LK + FLREDL+FS HS EGTD GVDTYFGLCTYPGRELR RIDLKVYPR+ +AFGL
Sbjct: 421 VQRLKGINFLREDLIFSIHSIEGTDCGVDTYFGLCTYPGRELRHRIDLKVYPRNRHAFGL 480

Query: 481 IAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKRGAKGSATLKIDTEKEVFEFL 523
           +AWTGNDVLNRRLR+LA+SKG+ LDDTGLY +T GSGGKRG +  A +  DTEK+VF+ L
Sbjct: 481 LAWTGNDVLNRRLRILADSKGYILDDTGLYLATPGSGGKRGGRSDAIINCDTEKDVFDTL 540

[Close]

BLAST of Sed0001006 vs. ExPASy Swiss-Prot
Match: Q4R380 (DNA polymerase lambda OS=Macaca fascicularis OX=9541 GN=POLL PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.9e-59
Identity = 128/331 (38.67%), Postives = 186/331 (56.19%), Query Frame = 0


Query: 194 NRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDH 253
           N +ITE    L   Y   GD  R+  Y KAI  ++     + S  +   +P IGK + + 
Sbjct: 253 NLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEK 312

Query: 254 IQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGYRTLDDLQNEESLT 313
           I EI+ SG L KL+H    E V  + LF  +WG G  TA   Y +G+R+L+D++++ SLT
Sbjct: 313 IIEILESGHLRKLDHI--SESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLT 372

Query: 314 HAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGSFRRGKSSCGDMDI 373
             Q IGLK+++D  +R+P  E  ++E  ++KA +    G+L +  GS+RRGK++CGD+D+
Sbjct: 373 TQQAIGLKHYNDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDV 432

Query: 374 VITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDTYFGLCTYPGRELR 433
           +ITHPDG+SHRG   R +  L+   FL +DLV  +  E G       Y G+C  PG   R
Sbjct: 433 LITHPDGRSHRGIFSRLLDSLRQQGFLTDDLV--SQEENGQQ---QKYLGVCRLPGPGWR 492

Query: 434 -RRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKRGA 493
            RR+D+ V P   +A  L+ +TG+   NR +R LA++KG  L +  L  ST       G 
Sbjct: 493 HRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL--STAVVRNTHGC 552

Query: 494 K--GSATLKIDTEKEVFEFLGFPWLEPHERN 522
           K      L   TEK+VF  LG P+ EP ER+
Sbjct: 553 KMGPGRVLPTPTEKDVFRLLGLPYREPAERD 574

[Close]

BLAST of Sed0001006 vs. ExPASy Swiss-Prot
Match: Q9UGP5 (DNA polymerase lambda OS=Homo sapiens OX=9606 GN=POLL PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-58
Identity = 128/331 (38.67%), Postives = 185/331 (55.89%), Query Frame = 0


Query: 194 NRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQVKHLPAIGKSLQDH 253
           N +ITE    L   Y   GD  R+  Y KAI  ++     + S  +   +P IGK + + 
Sbjct: 253 NLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEK 312

Query: 254 IQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGYRTLDDLQNEESLT 313
           I EI+ SG L KL+H    E V  + LF  +WG G  TA   Y +G+R+L+D++++ SLT
Sbjct: 313 IIEILESGHLRKLDHI--SESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLT 372

Query: 314 HAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGSFRRGKSSCGDMDI 373
             Q IGLK++ D  +R+P  E  ++E  ++KA +    G+L +  GS+RRGK++CGD+D+
Sbjct: 373 TQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRRGKATCGDVDV 432

Query: 374 VITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDTYFGLCTYPGRELR 433
           +ITHPDG+SHRG   R +  L+   FL +DLV  +  E G       Y G+C  PG   R
Sbjct: 433 LITHPDGRSHRGIFSRLLDSLRQEGFLTDDLV--SQEENGQQ---QKYLGVCRLPGPGRR 492

Query: 434 -RRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPSTQGSGGKRGA 493
            RR+D+ V P   +A  L+ +TG+   NR +R LA++KG  L +  L  ST       G 
Sbjct: 493 HRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHAL--STAVVRNTHGC 552

Query: 494 K--GSATLKIDTEKEVFEFLGFPWLEPHERN 522
           K      L   TEK+VF  LG P+ EP ER+
Sbjct: 553 KVGPGRVLPTPTEKDVFRLLGLPYREPAERD 574

[Close]

BLAST of Sed0001006 vs. ExPASy Swiss-Prot
Match: Q5RKI3 (DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.2e-58
Identity = 124/338 (36.69%), Postives = 186/338 (55.03%), Query Frame = 0


Query: 187 SYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQVKHLPAI 246
           S    + N +ITE    L   Y   GD  R+  Y KAI  ++     + S  +   +P +
Sbjct: 244 SQKATNYNLHITEKLEVLAKAYNVQGDKWRALGYAKAINALKSFHKPVSSYQEACSIPGV 303

Query: 247 GKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGYRTLDDL 306
           G+ + + + EI+ SG L KL+H    + V  + LF  +WG G  TA   Y +G+R+L+D+
Sbjct: 304 GRRMAEKVMEILESGHLRKLDHI--SDSVPVLELFSNIWGAGTKTAQMWYHQGFRSLEDI 363

Query: 307 QNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGSFRRGKS 366
           +   SLT  Q IGLK++DD   R+P  E  ++E +++ + +   PG+L +  GSFRRGK 
Sbjct: 364 RGLASLTAQQAIGLKHYDDFLDRMPREEAAEIEQMVRVSAQAFNPGLLCVACGSFRRGKV 423

Query: 367 SCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDTYFGLCT 426
           +CGD+D++ITHPDG+SH+G     +  L+   FL +DLV  +  E G       Y G+C 
Sbjct: 424 TCGDVDVLITHPDGRSHQGIFSPLLDSLRQQGFLTDDLV--SQEENGQQ---QKYLGVCR 483

Query: 427 YPGRELR-RRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLYPST-- 486
            PG   R RR+D+ V P   +A  L+ +TG+   NR +R LA++KG  L +  L  +   
Sbjct: 484 LPGAGQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVR 543

Query: 487 QGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERN 522
              G K GA     L   TEK+VF+ LG P+ EP ER+
Sbjct: 544 NSQGVKVGA--GQVLPTPTEKDVFKLLGLPYREPAERD 572

[Close]

BLAST of Sed0001006 vs. ExPASy TrEMBL
Match: A0A1S3BE44 (DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1)

HSP 1 Score: 924.5 bits (2388), Expect = 2.0e-265
Identity = 458/522 (87.74%), Postives = 493/522 (94.44%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKR KSQ++ +DPHGMFAGMVVFL+EKGVQ RRLQIWKQKL+QMGA +EERLSK VSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFA+SS+ALL+KV   RLARF+GKVLS+QWLEDSLSSGEKASEDLY V+ GL +E G+D 
Sbjct: 61  IFASSSDALLEKVDSARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGL-DEDGRDN 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQ S  KKLKLSPNN EAVS ES G+S+AS+LVTKTATGL++SKL + QTVTSPRTS  +
Sbjct: 121 PQQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASV 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            +NTS+SYSPPDMN+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPFKIESIDQV
Sbjct: 181 GNNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKSLQDHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLY+KGY
Sbjct: 241 KHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGY 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDLQ EESLTHAQK+GLKYFDDIKQRIP NEVQDME+LLKKAGEDVLPGV ILCGGS
Sbjct: 301 RTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFLP++VKHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           PSTQGSGGKRGA+G+ATLK DTEKEVFEFLGFPWLEPHERNL
Sbjct: 481 PSTQGSGGKRGARGTATLKFDTEKEVFEFLGFPWLEPHERNL 521

[Close]

BLAST of Sed0001006 vs. ExPASy TrEMBL
Match: A0A0A0KQD3 (DNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G603350 PE=3 SV=1)

HSP 1 Score: 921.4 bits (2380), Expect = 1.7e-264
Identity = 454/522 (86.97%), Postives = 494/522 (94.64%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKR KSQ++ +DPHGMFAGMVVFL+EKGVQ RRLQIWKQKL+QMGA +EERLSK VSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFA+S +ALL+KV G RLARF+GKVLS+QWLEDSLSSGEKASEDLY V+ GL +E G+D+
Sbjct: 61  IFASSLDALLEKVDGARLARFKGKVLSYQWLEDSLSSGEKASEDLYTVKVGL-DEDGRDK 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQ S  KKL LSPNN EAVS ES G+S+AS+LVTKTATGL++SKL + QTVTSPRTS+++
Sbjct: 121 PQQSTPKKLNLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFV 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            +N ++SYSPPDMN+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPF+IESIDQV
Sbjct: 181 GNNIALSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKSLQDHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLY+KGY
Sbjct: 241 KHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGY 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDLQ EESLTHAQK+GLKYFDDIKQRIP NEVQDMESLLKKAGEDVLPGV ILCGGS
Sbjct: 301 RTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFLP++VKHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           PSTQGSGGKRGA+G+ATLK DTEK+VFEFLGFPWLEPHERNL
Sbjct: 481 PSTQGSGGKRGARGTATLKFDTEKDVFEFLGFPWLEPHERNL 521

[Close]

BLAST of Sed0001006 vs. ExPASy TrEMBL
Match: A0A1S3BFA5 (DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 1.4e-263
Identity = 457/522 (87.55%), Postives = 492/522 (94.25%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKR KSQ++ +DPHGMFAGMVVFL+EKGVQ RRLQIWKQKL+QMGA +EERLSK VSH
Sbjct: 1   MAPKRRKSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEERLSKMVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFA+SS+ALL+KV   RLARF+G VLS+QWLEDSLSSGEKASEDLY V+ GL +E G+D 
Sbjct: 61  IFASSSDALLEKVDSARLARFKG-VLSYQWLEDSLSSGEKASEDLYTVKVGL-DEDGRDN 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQ S  KKLKLSPNN EAVS ES G+S+AS+LVTKTATGL++SKL + QTVTSPRTS  +
Sbjct: 121 PQQSTPKKLKLSPNNSEAVSFESGGDSDASTLVTKTATGLEDSKLSIGQTVTSPRTSASV 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            +NTS+SYSPPDMN+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPFKIESIDQV
Sbjct: 181 GNNTSLSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKSLQDHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLY+KGY
Sbjct: 241 KHLPAIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGY 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDLQ EESLTHAQK+GLKYFDDIKQRIP NEVQDME+LLKKAGEDVLPGV ILCGGS
Sbjct: 301 RTLDDLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMENLLKKAGEDVLPGVDILCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFLP++VKHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           PSTQGSGGKRGA+G+ATLK DTEKEVFEFLGFPWLEPHERNL
Sbjct: 481 PSTQGSGGKRGARGTATLKFDTEKEVFEFLGFPWLEPHERNL 520

[Close]

BLAST of Sed0001006 vs. ExPASy TrEMBL
Match: A0A6J1FRT1 (DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1)

HSP 1 Score: 910.2 bits (2351), Expect = 3.9e-261
Identity = 451/522 (86.40%), Postives = 490/522 (93.87%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKRSKSQ++ QDPHGMFAGMVV LIEKGVQARRLQIWKQKLLQMGA +E+RLSKRVSH
Sbjct: 1   MAPKRSKSQSLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLLQMGARIEDRLSKRVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFAASS+ALLQK+ GERLARFEGKVLS++WLEDSL SGE+ASEDLY V+ GL  E+G+DE
Sbjct: 61  IFAASSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQPS+SKKLKLSPNN E  S+ES G+SNA +LVTKTAT         DQTVT+PRTS+ +
Sbjct: 121 PQPSISKKLKLSPNNSEEGSIESGGDSNAPTLVTKTAT---------DQTVTNPRTSDSL 180

Query: 181 ISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIESIDQV 240
            SNTSMSYSPPD+N+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPFKIESIDQV
Sbjct: 181 NSNTSMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIESIDQV 240

Query: 241 KHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYDKGY 300
           KHLPAIGKSLQDHIQEI+T+GKL KLEHFETDEKV+TISLFGEVWGIGPATALRLYDKG 
Sbjct: 241 KHLPAIGKSLQDHIQEILTTGKLLKLEHFETDEKVQTISLFGEVWGIGPATALRLYDKGC 300

Query: 301 RTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLILCGGS 360
           RTLDDLQ +ESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLI+CGGS
Sbjct: 301 RTLDDLQ-KESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLIVCGGS 360

Query: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTDSGVDT 420
           FRRGKSSCGDMDIVITHPDGKSHRGFL R+VKHLKDMKFLREDL+FSTHSEEGTDSGVDT
Sbjct: 361 FRRGKSSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTDSGVDT 420

Query: 421 YFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLDDTGLY 480
           YFGLCTYPGRELR RIDLKVYPRDIYAFGL+AWTGNDVLNRRLRL+AE+KGFR+DDTGLY
Sbjct: 421 YFGLCTYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAETKGFRMDDTGLY 480

Query: 481 PSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           P+ QGSGGKRGAKGSA+LK DTEK++FEFLGFPWLEPH+RNL
Sbjct: 481 PAAQGSGGKRGAKGSASLKFDTEKDIFEFLGFPWLEPHQRNL 512

[Close]

BLAST of Sed0001006 vs. ExPASy TrEMBL
Match: A0A6J1FV83 (DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1)

HSP 1 Score: 904.0 bits (2335), Expect = 2.8e-259
Identity = 451/527 (85.58%), Postives = 490/527 (92.98%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEERLSKRVSH 60
           MAPKRSKSQ++ QDPHGMFAGMVV LIEKGVQARRLQIWKQKLLQMGA +E+RLSKRVSH
Sbjct: 1   MAPKRSKSQSLLQDPHGMFAGMVVLLIEKGVQARRLQIWKQKLLQMGARIEDRLSKRVSH 60

Query: 61  IFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGKDE 120
           IFAASS+ALLQK+ GERLARFEGKVLS++WLEDSL SGE+ASEDLY V+ GL  E+G+DE
Sbjct: 61  IFAASSDALLQKLDGERLARFEGKVLSYEWLEDSLRSGERASEDLYTVKVGLDGENGRDE 120

Query: 121 PQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQTVTSPRTSEYI 180
           PQPS+SKKLKLSPNN E  S+ES G+SNA +LVTKTAT         DQTVT+PRTS+ +
Sbjct: 121 PQPSISKKLKLSPNNSEEGSIESGGDSNAPTLVTKTAT---------DQTVTNPRTSDSL 180

Query: 181 ISN-----TSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEKLPFKIE 240
            SN     TSMSYSPPD+N+NITEIFGKLINIYRALGD+RRSFSY+KAIPVIEKLPFKIE
Sbjct: 181 NSNMKLVQTSMSYSPPDLNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFKIE 240

Query: 241 SIDQVKHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRL 300
           SIDQVKHLPAIGKSLQDHIQEI+T+GKL KLEHFETDEKV+TISLFGEVWGIGPATALRL
Sbjct: 241 SIDQVKHLPAIGKSLQDHIQEILTTGKLLKLEHFETDEKVQTISLFGEVWGIGPATALRL 300

Query: 301 YDKGYRTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLI 360
           YDKG RTLDDLQ +ESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLI
Sbjct: 301 YDKGCRTLDDLQ-KESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDVLPGVLI 360

Query: 361 LCGGSFRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTHSEEGTD 420
           +CGGSFRRGKSSCGDMDIVITHPDGKSHRGFL R+VKHLKDMKFLREDL+FSTHSEEGTD
Sbjct: 361 VCGGSFRRGKSSCGDMDIVITHPDGKSHRGFLQRYVKHLKDMKFLREDLIFSTHSEEGTD 420

Query: 421 SGVDTYFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGFRLD 480
           SGVDTYFGLCTYPGRELR RIDLKVYPRDIYAFGL+AWTGNDVLNRRLRL+AE+KGFR+D
Sbjct: 421 SGVDTYFGLCTYPGRELRHRIDLKVYPRDIYAFGLLAWTGNDVLNRRLRLVAETKGFRMD 480

Query: 481 DTGLYPSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           DTGLYP+ QGSGGKRGAKGSA+LK DTEK++FEFLGFPWLEPH+RNL
Sbjct: 481 DTGLYPAAQGSGGKRGAKGSASLKFDTEKDIFEFLGFPWLEPHQRNL 517

[Close]

BLAST of Sed0001006 vs. TAIR 10
Match: AT1G10520.1 (DNA polymerase lambda (POLL) )

HSP 1 Score: 719.2 bits (1855), Expect = 2.5e-207
Identity = 353/533 (66.23%), Postives = 436/533 (81.80%), Query Frame = 0


Query: 1   MAPKRSKSQNVPQDPHGMFAGMVVFLIEKGVQARRLQIWKQKLLQMGAIVEE-RLSKRVS 60
           MA KR ++++   DP GMFAGMVVF++E GVQ RRLQIWKQKL+QMGA++EE R++K+V+
Sbjct: 1   MAAKRGRNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVT 60

Query: 61  HIFAASSEALLQKVKGERLARFEGKVLSFQWLEDSLSSGEKASEDLYIVEAGLGEESGK- 120
           H+ A + EALL K   ERL+ F  +++ +QWLEDSL+SGEKA+EDLY+++    EE  K 
Sbjct: 61  HVLAMNLEALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKID-SEEVDKP 120

Query: 121 ---------DEPQPSVSKKLKLSPNNLEAVSVESEGESNASSLVTKTATGLDNSKLKMDQ 180
                     E Q S  K+ + SP+  +   VES   +  S   + T+  + ++     +
Sbjct: 121 KKSLPAISGSEDQSSPQKRTRYSPDAGDFKGVESHSNTQGSP-DSPTSCSVPSTSASPGE 180

Query: 181 TVTSPRTSEYIISNTSMSYSPPDMNRNITEIFGKLINIYRALGDDRRSFSYFKAIPVIEK 240
            +    TS    S ++  Y PPD+NRNITEIFGKLINIYRALG+DRRSFSY+KAIPVIEK
Sbjct: 181 GIAETPTSPQ--SESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEK 240

Query: 241 LPFKIESIDQVKHLPAIGKSLQDHIQEIVTSGKLSKLEHFETDEKVRTISLFGEVWGIGP 300
            P +IES+DQ+KHLP IGK+++DHIQEIVT+GKLSKLEHFETDEKVRTISLFGEVWG+GP
Sbjct: 241 FPTRIESVDQLKHLPGIGKAMRDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGP 300

Query: 301 ATALRLYDKGYRTLDDLQNEESLTHAQKIGLKYFDDIKQRIPCNEVQDMESLLKKAGEDV 360
           ATAL+LY+KG+RTL+DL+NE+SLTHAQK+GLKYFDDIK RIP  EVQ+ME LL++ GE+ 
Sbjct: 301 ATALKLYEKGHRTLEDLKNEDSLTHAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEET 360

Query: 361 LPGVLILCGGSFRRGKSSCGDMDIVITHPDGKSHRGFLPRFVKHLKDMKFLREDLVFSTH 420
           LPGV I+CGGS+RRGK++CGD+DIV+THPDG+SH+GFL +FVK LK+M FLREDL+FSTH
Sbjct: 361 LPGVNIVCGGSYRRGKATCGDLDIVVTHPDGQSHKGFLTKFVKRLKEMNFLREDLIFSTH 420

Query: 421 SEEGTDSGVDTYFGLCTYPGRELRRRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAES 480
           SEEGTDSGVDTYFGLCTYPG+ELRRRID KVYPRDIY+FGLIAWTGNDVLNRRLRLLAES
Sbjct: 421 SEEGTDSGVDTYFGLCTYPGQELRRRIDFKVYPRDIYSFGLIAWTGNDVLNRRLRLLAES 480

Query: 481 KGFRLDDTGLYPSTQGSGGKRGAKGSATLKIDTEKEVFEFLGFPWLEPHERNL 523
           KG+RLDDTGL+P+T  S G RGA+G+A+LK+ TEK+VF+FLGFPWLEPHERNL
Sbjct: 481 KGYRLDDTGLFPATHSSSGNRGARGTASLKLSTEKQVFDFLGFPWLEPHERNL 529

The following BLAST results are available for this feature:

BLAST of Sed0001006 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446253.1	4.1e-265	87.74	PREDICTED: DNA polymerase beta isoform X1 [Cucumis melo] >XP_008446254.1 PREDICT...	[more]
XP_004135473.1	3.5e-264	86.97	DNA polymerase lambda isoform X1 [Cucumis sativus] >KGN51838.1 hypothetical prot...	[more]
XP_008446256.1	3.0e-263	87.55	PREDICTED: DNA polymerase beta isoform X2 [Cucumis melo]	[more]
XP_011655646.1	2.5e-262	86.78	DNA polymerase lambda isoform X2 [Cucumis sativus]	[more]
XP_038892425.1	9.6e-262	86.59	DNA polymerase lambda isoform X1 [Benincasa hispida]	[more]

BLAST of Sed0001006 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNY4	3.5e-206	66.23	DNA polymerase lambda OS=Arabidopsis thaliana OX=3702 GN=POLL PE=1 SV=1	[more]
Q67VC8	2.0e-185	60.69	DNA polymerase lambda OS=Oryza sativa subsp. japonica OX=39947 GN=POLL PE=1 SV=1	[more]
Q4R380	4.9e-59	38.67	DNA polymerase lambda OS=Macaca fascicularis OX=9541 GN=POLL PE=2 SV=1	[more]
Q9UGP5	1.1e-58	38.67	DNA polymerase lambda OS=Homo sapiens OX=9606 GN=POLL PE=1 SV=1	[more]
Q5RKI3	3.2e-58	36.69	DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1	[more]

BLAST of Sed0001006 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BE44	2.0e-265	87.74	DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1	[more]
A0A0A0KQD3	1.7e-264	86.97	DNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G603350 PE=3 SV=1	[more]
A0A1S3BFA5	1.4e-263	87.55	DNA polymerase OS=Cucumis melo OX=3656 GN=LOC103489040 PE=3 SV=1	[more]
A0A6J1FRT1	3.9e-261	86.40	DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1	[more]
A0A6J1FV83	2.8e-259	85.58	DNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447588 PE=3 SV=1	[more]

BLAST of Sed0001006 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10520.1	2.5e-207	66.23	DNA polymerase lambda (POLL)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002008	DNA polymerase family X, beta-like	PRINTS	PR00870	DNAPOLXBETA	coord: 503..520 score: 35.56 coord: 434..442 score: 46.67 coord: 357..376 score: 52.0 coord: 449..456 score: 37.5 coord: 245..262 score: 31.11 coord: 317..331 score: 57.33
IPR022312	DNA polymerase family X	PRINTS	PR00869	DNAPOLX	coord: 286..303 score: 43.59 coord: 451..464 score: 36.26 coord: 356..370 score: 49.74 coord: 502..520 score: 39.68 coord: 370..378 score: 54.7 coord: 435..444 score: 44.62
IPR022312	DNA polymerase family X	PANTHER	PTHR11276	DNA POLYMERASE TYPE-X FAMILY MEMBER	coord: 18..521
IPR002054	DNA-directed DNA polymerase X	SMART	SM00483	polxneu3	coord: 192..521 e-value: 9.9E-112 score: 387.2
IPR002054	DNA-directed DNA polymerase X	CDD	cd00141	NT_POLXc	coord: 195..520 e-value: 1.77305E-112 score: 334.163
IPR010996	DNA polymerase beta-like, N-terminal domain	PFAM	PF14716	HHH_8	coord: 194..259 e-value: 1.5E-13 score: 50.9
IPR028207	DNA polymerase beta, palm domain	PFAM	PF14792	DNA_pol_B_palm	coord: 329..442 e-value: 7.8E-28 score: 97.0
IPR027421	DNA polymerase lambda lyase domain superfamily	GENE3D	1.10.150.110		coord: 170..267 e-value: 3.0E-23 score: 83.9
IPR027421	DNA polymerase lambda lyase domain superfamily	SUPERFAMILY	47802	DNA polymerase beta, N-terminal domain-like	coord: 188..269
None	No IPR available	GENE3D	1.10.150.20		coord: 268..327 e-value: 7.8E-23 score: 82.0
None	No IPR available	PANTHER	PTHR11276:SF1	DNA POLYMERASE IV	coord: 18..521
None	No IPR available	SUPERFAMILY	81585	PsbU/PolX domain-like	coord: 272..327
IPR029398	DNA polymerase beta, thumb domain	PFAM	PF14791	DNA_pol_B_thumb	coord: 450..521 e-value: 3.0E-19 score: 68.9
IPR043519	Nucleotidyltransferase superfamily	GENE3D	3.30.460.10	Beta Polymerase, domain 2	coord: 329..454 e-value: 3.5E-32 score: 113.1
IPR043519	Nucleotidyltransferase superfamily	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 329..521
IPR037160	DNA polymerase, thumb domain superfamily	GENE3D	3.30.210.10	DNA polymerase, thumb domain	coord: 455..522 e-value: 7.3E-19 score: 69.4
IPR018944	DNA polymerase lambda, fingers domain	PFAM	PF10391	DNA_pol_lambd_f	coord: 280..326 e-value: 3.5E-19 score: 68.4
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 9..109 e-value: 2.7E-16 score: 61.3
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 8..108
IPR019843	DNA polymerase family X, binding site	PROSITE	PS00522	DNA_POLYMERASE_X	coord: 359..378
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 14..108 score: 14.11856

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0001006.1	Sed0001006.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0034061	DNA polymerase activity
molecular_function	GO:0016779	nucleotidyltransferase activity