Sed0001001 (gene) Chayote v1

Overview
NameSed0001001
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG09: 37619422 .. 37625460 (+)
RNA-Seq ExpressionSed0001001
SyntenySed0001001
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATCCTTCCATCGTCTTCACCTTCATCTTGCCCCTAATCTTCCCCTGTTCGTCAATTTCCCCAACCTCCACAGTCGCTTCAATGGCGTCTATAACCCTAACTCCTTCCTTCATCTCTTCTTCCCATCCACGGCCTCTCAGCCGGAGTTCCACCGCCCAATCTTCCAACGGTCTACAGAGAGATTCCAACAAGGGCTTGTCTCGGATTCTGAGGAAAGACGCTGCGATTCGAGCTATCGAGCGGAAAGCAAACTCCAAAAAGTACAATAATCTCTGGCCTAAAGCTGTTTTGGAGGCTCTTGATGAGGCTGTTATGGAGAATCTCTGGGAAACTGCCCTTAAGGTTCGTTGTTCTTATTCAATCTTTTGCTTTTTTATTTCGTTTTAATGTTTTTCCCACAATAGTCGAGAAGATTGGAACATTAATTGGTTATGAAATGTTTGGGACTGATAGGTTTTTTGGTTAATTTTTTTATATTCGTGACTATCCAGGCCAGCTTGCGCGCATCTCGACTAATGTCACGGGGCATATCGCCTGACCCTACAATATTTAGATGTCAAGTTTTGTGGTTAAGAATAGTATTCCTATCTTTGTTCGATATATGAGCGAAGAATGTTAAATTTAAATGCTGAATTTTTTTTGAAACAAGGGTCCATCCCTAGGCCAAGCACCAGAGACATCAAGTGAGTCTTGAACCCAAGACCTTGAGGGGAGCATACCCTCGAATCCTAAGTCTTCGACCATTGTTCCACCCTTGGGGACGTTAAAATGCTGAATTCAAAAGCCCCAAGTGGATGAGCTACACCAACTTAAATTTTCTATCAATGTTTTTTACACTCTTACCTACCTTTACCTTTCACTTGTAAGCTTAAGGGTTTGCACAAAGATATTAATTGGAAGAGGAAATAAAACTAAAAGGTCGGACTTCCATGTAACCATCTTGGATGACCTTGTGGTCAAAAGAGTTTTAAGAAATCAAAAGGTTATATGTTCTATACATGGCGATCACCTATCTAAGAATTTATTTTTTATGTTTTTCTTAATATCTGTAGGTCAAGTGGTATGTTAAGTGAGCATAGTTGAGTGTGCGTAAACTCGCTCGAACCCTCACGAATATAAAAAAAACTTAGAACCTCCATATCTTGCTCTGATATCATTTAAATCACTAATCAAACTAACACCTGGAGGTCTACTCAATGTGGGATACTCAACATGCTTCAACACACTTACCTACCTTTTACTTGTAAGCTTAAGAATTTGCACAAAGTTCAATTAGTGGTTGTAGATGGAAGAGGAAATAAAACTACAACGTTGGAACATAGGACCTCTGGGCTATAGAAACCAAAAGGTTATGGATTCAATCTATGACGACCAATTATTTAAGAATTAATTTCATACAGATTTTCTTGGCTTCCAATTGTTGTAGAGTCAATCATTATGTCCCGTGAGAATAGCAGAGTGCGTGTAAGCTAACCCAAAAACTCACGATATAAAAAAATAATAATAATAATAAATAGGACGTCCATATCGTGCTCTGATACCATTTAAATTACTAATCAAAGTAAAAGTTTAAGTTTAATTTTTTCTAAGAAACAATTTGATGCATGCATATATAATAGAATATTAAGTTAATGGTGATTAAATTACAAAAGTTGAAAATTTAATGGCTTACGGTAAATTTAATCTTTTATCTATACTTTGATTATAGCTTGAACTTGAATTTCATATAATTTCTAATTGCGTCTAAAGTGAGCAATTTCCAGACTGCCTTGTTTGGTGAATTTCTAAGCGTGCTCAAATTCCTTCTAGAAGCCCTTTAGCACTTGAATATTAGGAAATGAAAGACTAAAGGGAGAAAAGGTTCAATTTAAAAATCCTCCAAAATTGTAAAAATTTTCCCATTTTTCAGCTTTGGAGGCATCATCTTTCTCCAGAAAAGCTCTAGGTTTAGCAATCTCAAGCCAATGGCCAAATGCCAAAGCTTCTTTATCTGAAATTTCTTTCATGAAGGAATCAAGGCTGTCACCATGGAGTGTTCCCCTCGAGAAAGAGCCTTTGCACAGTTCTGATATAAGAGGGTATTTCTGTTTCTGTTTTTTTTTTTTTGAGATCTCTGATATTTCCCACTCCCAGCCGGCCGTAAGATTGATTTTTGCTTTATTTCTGTTGTTCAGAACCGTTGCATCATGTCTTGTTAGTGATCTCTTAAACCCATCGAAGATCTTCTTATTTAAGAGGATTATCACAAGATCTTTCAAGGTATCAGCTAACCAAACAACCGAGAATAATCCATCCGTAGGTTCGAAAAGTTCCTTTCCTTCATTTTTGAAGTACATTGAGCAAAAAAATATTGATACAGCATTTCCATACTGAAAATAAAGAACCTTATAACTAATGAACTGGTTTTAAGTTCACCCTTGTATTTGACAATAAGTGTTATGACCATATAATTTGGTACATCTCTTCAGATTTTCGGCTTACTTCGCCAGCAACATTGGTATGAACCTAGATGCCAAACATACACTAAATTGTTGATGATGCTGGGTAAGTGCAGGCAACCTGAGCAAGCCAGCTTGGTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCTTCCATTGATGTTTACACTGCTCTTGTTAGTGCTTATGGTCGAAGTGGCCTCCTTCACAAGGCCATTTCAACAGTAGATGAAATGAAATCTGTTTCCGACTGCAAACCAGATGTACATACATACTCAATTCTCATTGATTGCTGCACAAGACTTCGCCGTCTCGATCTTCTAAAGGACATTTTTGCTGATATGTCATATCTGGGGATTACATGTAATACAGTTACTTACAACACCATTATTAATGGATTTGGAAAGGCTAAAATGTTTGAGCAGATGGAAAGCTTGTTACTGGAAATGATTGAAAGTGCTACCTGTCTTCCAGATTTGATTACATTTAATTCTTTTATCAGAGCTTATGGCAATAGCGAGCAGATTGAGAAGATGGAGAAGTGGTATAATGAATTTCAGCTGATGGGAATTGAGCCCGATGTCTGGACGTACAATACAATGATCAGCGCATATGGGAAAGCTAGAATGTACGACAAGATGGTCTCTGTTTTGAATTTTATGGAAAAACGTTTTTTCTCTCCAACAATTGTTACCATGAATACAATCATTGATGTGTTTGGACGAGCTGGAAATATTGTGAAGATGGAAGAGTACTTCAAAAAAATGAAATATCAGGGAATGAAGCCCAACTCCGTGACGTACTGTTCCCTTGTTAATGCTTATGGTAAATCTGGCAATATTGAAAAAGTTGATTCAATTTTGAGGCAAATTGAAAATTCTGATGTGGTACTAGATACCTCTCTTTTTAACTGCCTTATCAACGTGTATGGCCGGGCCGGTGATGTGAGAAAGATGGGAGAGTTGTTCTTGGAAATGAAAGAGAATAAATGTGTTCCCGATAGCATTACATTTGCTACAATGATACGTGCTTTAAATGCTCAAGGCATGACAGAGGATGCTCAAAGATTGGAGAATAAGTTGATTGCCAGCAGACATGACAAGGTGAATTGGTGCTTTGATTTTGTTTTGCATAATAGTTGATTACAATAATTGTGATGTTGCCAAAATGACATATCTTAGCAGTTAGAGCATTACTACTTCTTGCAGGAGGTCGAATGTTCGAATTCCCATCCTACATGTGATATAATATTAAAAAAAACAGTGTTGTCATGTTGCTCATTTTCCAGTCCTATATATTCTTTTGTGGAAACGACATAATTCCGGACATAAGAAGATATCTTGCTTTCTTGTGCCTTTTCTTTCCAGCTGATTTTATGTTGTTTTCATGTACTAAAACTGATAGGATCCTTTTATCAGGCCCCTTATTAGATAGTTAGGAAGTTACATTCGGTTAGTCAGTTAGTTAGTTAGTCCATTATGGGCAGTATAAGTGCTCTCTTTTTCCTAAATCAATACAGCTTGAATATTCATTTGAAGTCTATCGAGGGAGAGACCTTTTGATAGAGTAAGACTATCAGAAACTTTATGACCCTCTCTTACATCCTTTTTTTATATTCTATTGGTTTGATGCAGTGTGGTGCGCTATAAGAAAAACCTGGCTGGACTAAACAGTGCCCAACACTTCACTAGTTACACACACTGCTGCAACAGAGGGCATGGTTACATTTTTTAACGGATCTTCGTCTTCGTTAGAGCAGGCCAATCTTCTCAATTCTTCAGGTAGACTTCATTAATTTGTCACATTGCGAATCAACTGAAGATTTCCATTCTTTCTTTAGTTATTGCTGGCTTCTTTTTTGAAAAATAATTTTTCTGTTGGATAACACTTAATATAAATAACTGCAAAGTTTTGTGCTTATTCAGGTTCAGTTTATATCGTATATCATTCGAAAGTTGGTCTCATGTTGGGGCAATGAATATCTTTCACGACAAGGAAAGTTTCTTGATGGTCTTGTGTCTAAATGATCATATTTTAACAAGTAAGCACACCTTTTTTCGTTTCTTTTCTAATCATGTTTTTTTATATCCTCGAGTGTCTGGGCCACAGCTTACGCACATCTCAACTATTTATCATGGAACATATCGCGTGACCTCTATAACATCTGAAATGTTAGGAAAACTTATAATAAATTAATTCGTAGGTAGTTAGCCACCATGGATCGAATTCATAACCTTTTGGTTTCTTAAGACCCTCATTCACTAGTAAGATGATTTCTTTTTTTAATTGATTGCAAATAATTTCTCAAAATGTAGTGTAATTAACACAATTCCAGGATTCGCCACTCACTTAAATTGCTTACGTGAAAATGTGGACTGCTATTGGTTTAAGATAGGCTTAGTATAACAAAGTTTTAGACTAGTACGGTCGATTCAAACCTAGCTTAGTATATTAGACGTCTAGCGCTGTAGGTAGGCGCCTTACTATCCCAAAAGTCGATGGTTCAAATCTTCACCTCTACAATTATTGAACCTAAAAAAGTCATCAACTCTGTGAGACCAACTCTACTAATAACAAAATCTAAATTCAACAAACTTTCAGTTCAATTTCCATTCCCGACACGGTATATATCTACTTTTTCGCTTACCCTCACGACGTTACATTGCTAATTCATGTATAATATTATTGTATTTGACAGAAAAACTATGTTCTTGACCAGTGACCCCACCCCCCACAAGCTTAATGGGACTACTATTCCATTCCTTTAAATGCAATCAACCATCAGCAACAAAACATTCCTCTCTGGTCTTTTCAGACCTATCTGAATCACATCACAAATGATTTGGTGCTAGGGAAGCTCTAGCTTATGTGGCTTGCAATGGCTAGAATTGGACTACAGGTTGACGCAAGATGCTCGTCGTACTATTACACTGTGGCTCAACGCCCGATGCACAATCTTCTGGTATCTTTTAACTGTGACTGTTACTATTATACCGTGGCCCATTGCCTTTTTGCATAATATTCTTGCATCTTTTATTGTGATCCAAGCTGTGCTCATCTAAAACTTGTCTATAGACATCCTTGTAATTGCATTCCTACTTGGAGAGGTCTAGGTTCTGAGGAAAGTCTAGCATTTATTAGTCTTCCCTCCTTAATGAGAGAATCTATTGTGCTTTAGGCAGCAGCTTTCAAAGAATATACTAATGGTTCTTTACCATGTTGGCATATTTTTATTATATAAGTTGTTTGATGACCACCTACCTACGAATTATGAATTAATTTCTTTCAAATTTTCTTGATAGTCAAATTACTGTTATTGTTATATGAGAATAGTTGAGGTCGCAGACACTGACCTAAACGGTCAGGATATTAAGAAAAAAAAAAAACATATCTGGATGTTAGGGACTCGATTTGAATAGGGTATGGAAAGACCTCTTTTTATTTATTTTTGTATTCTCTTCTAACCCCAATATTGCAGTTCCTCTTTCAAAGATGAGTCAAGAATTTACCATCCTAAAGATTGATCCTTAATTGAGAAATTTCTGAACTTGTCTCAATTTCTTTACATTGAAGAACG

mRNA sequence

CTAATCCTTCCATCGTCTTCACCTTCATCTTGCCCCTAATCTTCCCCTGTTCGTCAATTTCCCCAACCTCCACAGTCGCTTCAATGGCGTCTATAACCCTAACTCCTTCCTTCATCTCTTCTTCCCATCCACGGCCTCTCAGCCGGAGTTCCACCGCCCAATCTTCCAACGGTCTACAGAGAGATTCCAACAAGGGCTTGTCTCGGATTCTGAGGAAAGACGCTGCGATTCGAGCTATCGAGCGGAAAGCAAACTCCAAAAAGTACAATAATCTCTGGCCTAAAGCTGTTTTGGAGGCTCTTGATGAGGCTGTTATGGAGAATCTCTGGGAAACTGCCCTTAAGATTTTCGGCTTACTTCGCCAGCAACATTGGTATGAACCTAGATGCCAAACATACACTAAATTGTTGATGATGCTGGGTAAGTGCAGGCAACCTGAGCAAGCCAGCTTGGTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCTTCCATTGATGTTTACACTGCTCTTGTTAGTGCTTATGGTCGAAGTGGCCTCCTTCACAAGGCCATTTCAACAGTAGATGAAATGAAATCTGTTTCCGACTGCAAACCAGATGTACATACATACTCAATTCTCATTGATTGCTGCACAAGACTTCGCCGTCTCGATCTTCTAAAGGACATTTTTGCTGATATGTCATATCTGGGGATTACATGTAATACAGTTACTTACAACACCATTATTAATGGATTTGGAAAGGCTAAAATGTTTGAGCAGATGGAAAGCTTGTTACTGGAAATGATTGAAAGTGCTACCTGTCTTCCAGATTTGATTACATTTAATTCTTTTATCAGAGCTTATGGCAATAGCGAGCAGATTGAGAAGATGGAGAAGTGGTATAATGAATTTCAGCTGATGGGAATTGAGCCCGATGTCTGGACGTACAATACAATGATCAGCGCATATGGGAAAGCTAGAATGTACGACAAGATGGTCTCTGTTTTGAATTTTATGGAAAAACGTTTTTTCTCTCCAACAATTGTTACCATGAATACAATCATTGATGTGTTTGGACGAGCTGGAAATATTGTGAAGATGGAAGAGTACTTCAAAAAAATGAAATATCAGGGAATGAAGCCCAACTCCGTGACGTACTGTTCCCTTGTTAATGCTTATGGTAAATCTGGCAATATTGAAAAAGTTGATTCAATTTTGAGGCAAATTGAAAATTCTGATGTGGTACTAGATACCTCTCTTTTTAACTGCCTTATCAACGTGTATGGCCGGGCCGGTGATGTGAGAAAGATGGGAGAGTTGTTCTTGGAAATGAAAGAGAATAAATGTGTTCCCGATAGCATTACATTTGCTACAATGATACGTGCTTTAAATGCTCAAGGCATGACAGAGGATGCTCAAAGATTGGAGAATAAGTTGATTGCCAGCAGACATGACAAGTGTGGTGCGCTATAAGAAAAACCTGGCTGGACTAAACAGTGCCCAACACTTCACTAGTTACACACACTGCTGCAACAGAGGGCATGGTTACATTTTTTAACGGATCTTCGTCTTCGTTAGAGCAGGCCAATCTTCTCAATTCTTCAGGTTCAGTTTATATCGTATATCATTCGAAAGTTGGTCTCATGTTGGGGCAATGAATATCTTTCACGACAAGGAAAGTTTCTTGATGGTCTTGTGTCTAAATGATCATATTTTAACAAAAAAACTATGTTCTTGACCAGTGACCCCACCCCCCACAAGCTTAATGGGACTACTATTCCATTCCTTTAAATGCAATCAACCATCAGCAACAAAACATTCCTCTCTGGTCTTTTCAGACCTATCTGAATCACATCACAAATGATTTGGTGCTAGGGAAGCTCTAGCTTATGTGGCTTGCAATGGCTAGAATTGGACTACAGGTTGACGCAAGATGCTCGTCGTACTATTACACTGTGGCTCAACGCCCGATGCACAATCTTCTGGTATCTTTTAACTGTGACTGTTACTATTATACCGTGGCCCATTGCCTTTTTGCATAATATTCTTGCATCTTTTATTGTGATCCAAGCTGTGCTCATCTAAAACTTGTCTATAGACATCCTTGTAATTGCATTCCTACTTGGAGAGGTCTAGGTTCTGAGGAAAGTCTAGCATTTATTAGTCTTCCCTCCTTAATGAGAGAATCTATTGTGCTTTAGGCAGCAGCTTTCAAAGAATATACTAATGGTTCTTTACCATGTTGGCATATTTTTATTATATAAGTTGTTTGATGACCACCTACCTACGAATTATGAATTAATTTCTTTCAAATTTTCTTGATAGTCAAATTACTGTTATTGTTATATGAGAATAGTTGAGGTCGCAGACACTGACCTAAACGGTCAGGATATTAAGAAAAAAAAAAAACATATCTGGATGTTAGGGACTCGATTTGAATAGGGTATGGAAAGACCTCTTTTTATTTATTTTTGTATTCTCTTCTAACCCCAATATTGCAGTTCCTCTTTCAAAGATGAGTCAAGAATTTACCATCCTAAAGATTGATCCTTAATTGAGAAATTTCTGAACTTGTCTCAATTTCTTTACATTGAAGAACG

Coding sequence (CDS)

ATGGCGTCTATAACCCTAACTCCTTCCTTCATCTCTTCTTCCCATCCACGGCCTCTCAGCCGGAGTTCCACCGCCCAATCTTCCAACGGTCTACAGAGAGATTCCAACAAGGGCTTGTCTCGGATTCTGAGGAAAGACGCTGCGATTCGAGCTATCGAGCGGAAAGCAAACTCCAAAAAGTACAATAATCTCTGGCCTAAAGCTGTTTTGGAGGCTCTTGATGAGGCTGTTATGGAGAATCTCTGGGAAACTGCCCTTAAGATTTTCGGCTTACTTCGCCAGCAACATTGGTATGAACCTAGATGCCAAACATACACTAAATTGTTGATGATGCTGGGTAAGTGCAGGCAACCTGAGCAAGCCAGCTTGGTGTTTCAGATTATGTTGTCTGAGGGGTTGAAACCTTCCATTGATGTTTACACTGCTCTTGTTAGTGCTTATGGTCGAAGTGGCCTCCTTCACAAGGCCATTTCAACAGTAGATGAAATGAAATCTGTTTCCGACTGCAAACCAGATGTACATACATACTCAATTCTCATTGATTGCTGCACAAGACTTCGCCGTCTCGATCTTCTAAAGGACATTTTTGCTGATATGTCATATCTGGGGATTACATGTAATACAGTTACTTACAACACCATTATTAATGGATTTGGAAAGGCTAAAATGTTTGAGCAGATGGAAAGCTTGTTACTGGAAATGATTGAAAGTGCTACCTGTCTTCCAGATTTGATTACATTTAATTCTTTTATCAGAGCTTATGGCAATAGCGAGCAGATTGAGAAGATGGAGAAGTGGTATAATGAATTTCAGCTGATGGGAATTGAGCCCGATGTCTGGACGTACAATACAATGATCAGCGCATATGGGAAAGCTAGAATGTACGACAAGATGGTCTCTGTTTTGAATTTTATGGAAAAACGTTTTTTCTCTCCAACAATTGTTACCATGAATACAATCATTGATGTGTTTGGACGAGCTGGAAATATTGTGAAGATGGAAGAGTACTTCAAAAAAATGAAATATCAGGGAATGAAGCCCAACTCCGTGACGTACTGTTCCCTTGTTAATGCTTATGGTAAATCTGGCAATATTGAAAAAGTTGATTCAATTTTGAGGCAAATTGAAAATTCTGATGTGGTACTAGATACCTCTCTTTTTAACTGCCTTATCAACGTGTATGGCCGGGCCGGTGATGTGAGAAAGATGGGAGAGTTGTTCTTGGAAATGAAAGAGAATAAATGTGTTCCCGATAGCATTACATTTGCTACAATGATACGTGCTTTAAATGCTCAAGGCATGACAGAGGATGCTCAAAGATTGGAGAATAAGTTGATTGCCAGCAGACATGACAAGTGTGGTGCGCTATAA

Protein sequence

MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSITFATMIRALNAQGMTEDAQRLENKLIASRHDKCGAL
Homology
BLAST of Sed0001001 vs. NCBI nr
Match: KAG6593286.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 811.2 bits (2094), Expect = 4.5e-231
Identity = 407/452 (90.04%), Postives = 425/452 (94.03%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           MASI  TP FISSS  R L+R+S  QSS+GLQRD  KGLSRILRKDAAIRAIERKANSKK
Sbjct: 27  MASINPTPFFISSSRSRKLNRTSD-QSSDGLQRDPKKGLSRILRKDAAIRAIERKANSKK 86

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWP+AVLEALDEA+ ENLWET LKIFGLLRQQHWYEPRC+TYTKLLMMLGKCRQPEQ
Sbjct: 87  YNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPEQ 146

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+FQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAI TVDEMKS+SDCKPDVHTYSILI
Sbjct: 147 ASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAIETVDEMKSISDCKPDVHTYSILI 206

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTR RRLDLLKDI ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 207 DCCTRFRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSC 266

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
           LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPD WTYNTMIS+YGKARMYDKMVS
Sbjct: 267 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVS 326

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIIDVFGRAGN+ +MEEYF+KMK+QGMKPNSVTYCSLVNAYG
Sbjct: 327 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEEYFRKMKHQGMKPNSVTYCSLVNAYG 386

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           K+GNIEKVDSILRQIENSDVVLDT LFNCLINVYG+AGDVRKMGELFLEMKENKC+PDSI
Sbjct: 387 KAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMKENKCLPDSI 446

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIASRHDK 453
           TFATM+ AL   GMTE AQRLENKLI  R DK
Sbjct: 447 TFATMVHALKTHGMTEAAQRLENKLIVGRDDK 477

BLAST of Sed0001001 vs. NCBI nr
Match: KAG7025638.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 810.8 bits (2093), Expect = 5.8e-231
Identity = 407/452 (90.04%), Postives = 425/452 (94.03%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           MASI  TP FISSS  R L+R+S  QSS+GLQRD  KGLSRILRKDAAIRAIERKANSKK
Sbjct: 27  MASINPTPFFISSSRSRKLNRTSD-QSSDGLQRDPKKGLSRILRKDAAIRAIERKANSKK 86

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWP+AVLEALDEA+ ENLWET LKIFGLLRQQHWYEPRC+TYTKLLMMLGKCRQPEQ
Sbjct: 87  YNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPEQ 146

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+FQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAI TVDEMKS+SDCKPDVHTYSILI
Sbjct: 147 ASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAIETVDEMKSISDCKPDVHTYSILI 206

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTR RRLDLLKDI ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 207 DCCTRYRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSC 266

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
           LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPD WTYNTMIS+YGKARMYDKMVS
Sbjct: 267 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVS 326

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIIDVFGRAGN+ +MEEYF+KMK+QGMKPNSVTYCSLVNAYG
Sbjct: 327 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEEYFRKMKHQGMKPNSVTYCSLVNAYG 386

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           K+GNIEKVDSILRQIENSDVVLDT LFNCLINVYG+AGDVRKMGELFLEMKENKC+PDSI
Sbjct: 387 KAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMKENKCLPDSI 446

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIASRHDK 453
           TFATM+ AL   GMTE AQRLENKLI  R DK
Sbjct: 447 TFATMVHALKTHGMTEAAQRLENKLIVGRDDK 477

BLAST of Sed0001001 vs. NCBI nr
Match: XP_023004532.1 (pentatricopeptide repeat-containing protein At3g53170 [Cucurbita maxima])

HSP 1 Score: 810.8 bits (2093), Expect = 5.8e-231
Identity = 408/452 (90.27%), Postives = 425/452 (94.03%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           MASI  TP FISSS  R L+R+S  QSS+GLQRD  KGLSRILRKDAAIRAIERKANSKK
Sbjct: 1   MASINPTPLFISSSRSRKLNRTSD-QSSDGLQRDLKKGLSRILRKDAAIRAIERKANSKK 60

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWP AVLEALDEA+ ENLWET LKIFGLLRQQHWYEPRC+TYTKLLMMLGKCRQP+Q
Sbjct: 61  YNNLWPSAVLEALDEAIQENLWETTLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPKQ 120

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+FQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAI TVDEMKS+SDCKPDVHTYSILI
Sbjct: 121 ASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAIETVDEMKSISDCKPDVHTYSILI 180

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTR RRLDLLKDI ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 181 DCCTRFRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSC 240

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
           LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPD WTYNTMIS+YGKARMYDKMVS
Sbjct: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVS 300

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIIDVFGRAGNI +MEEYF+KMKYQGMKPNSVTYCSLVNAYG
Sbjct: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIKRMEEYFRKMKYQGMKPNSVTYCSLVNAYG 360

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           K+GNIEKVDSILRQIENSDVVLDT LFNCLINVYG+AGDVRKMGELFLEM+ENKCVPDSI
Sbjct: 361 KAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMEENKCVPDSI 420

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIASRHDK 453
           TFATM+ AL   GMTE AQRLENKLI +R DK
Sbjct: 421 TFATMVHALKTHGMTEAAQRLENKLIVTRDDK 451

BLAST of Sed0001001 vs. NCBI nr
Match: XP_023515060.1 (pentatricopeptide repeat-containing protein At3g53170 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 810.8 bits (2093), Expect = 5.8e-231
Identity = 407/452 (90.04%), Postives = 425/452 (94.03%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           MASI  TP FISSS  R L+R+S  QSS+GLQRD  KGLSRILRKDAAIRAIERKANSKK
Sbjct: 27  MASINPTPFFISSSRSRKLNRTSD-QSSDGLQRDPKKGLSRILRKDAAIRAIERKANSKK 86

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWP+AVLEALDEA+ ENLWET LKIFGLLRQQHWYEPRC+TYTKLLMMLGKCRQPEQ
Sbjct: 87  YNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPEQ 146

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+FQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAI TVDEMKS+SDCKPDVHTYSILI
Sbjct: 147 ASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAIETVDEMKSISDCKPDVHTYSILI 206

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTR RRLDLLKDI ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIE+ +C
Sbjct: 207 DCCTRYRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIETGSC 266

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
           LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPD WTYNTMIS+YGKARMYDKMVS
Sbjct: 267 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVS 326

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIIDVFGRAGN+ +MEEYF+KMK+QGMKPNSVTYCSLVNAYG
Sbjct: 327 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEEYFRKMKHQGMKPNSVTYCSLVNAYG 386

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           K+GNIEKVDSILRQIENSDVVLDT LFNCLINVYG+AGDVRKMGELFLEMKENKCVPDSI
Sbjct: 387 KAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMKENKCVPDSI 446

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIASRHDK 453
           TFATM+ AL   GMTE AQRLENKLI  R DK
Sbjct: 447 TFATMVHALKTHGMTEAAQRLENKLIVGRDDK 477

BLAST of Sed0001001 vs. NCBI nr
Match: XP_022960242.1 (pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_022960243.1 pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_022960244.1 pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata])

HSP 1 Score: 807.7 bits (2085), Expect = 4.9e-230
Identity = 405/452 (89.60%), Postives = 425/452 (94.03%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           MASI  TP FISSS  R L+R+S  QSS+GLQRD  KGLSRILRKDAAIRAIERKANSKK
Sbjct: 27  MASINPTPFFISSSRSRKLNRTSD-QSSDGLQRDPKKGLSRILRKDAAIRAIERKANSKK 86

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWP+AVLEALDEA+ ENLWET LKIFGLLRQQHWYEPRC+TYTKLLMMLGKCRQPEQ
Sbjct: 87  YNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPEQ 146

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+FQIMLSEGLKPSIDVYTALVSAYGRSGLLH+AI TVDEMKS+SDCKPDVHTYSILI
Sbjct: 147 ASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHEAIETVDEMKSISDCKPDVHTYSILI 206

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTR RRLDLLKDI ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 207 DCCTRFRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSC 266

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
           LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPD WTYNTMIS+YGKARMYDKMVS
Sbjct: 267 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVS 326

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIIDVFGRAGN+ +MEEYF+KMK+QGMKPNSVTYCSLVNAYG
Sbjct: 327 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEEYFRKMKHQGMKPNSVTYCSLVNAYG 386

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           K+GNIEKVDSILRQIENSDVVLDT LFNCLINVYG+AGDVRKMGELFLEMKEN+CVPDSI
Sbjct: 387 KAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMKENRCVPDSI 446

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIASRHDK 453
           TFATM+ AL   GMTE AQRLENKLI  R +K
Sbjct: 447 TFATMVHALKTHGMTEAAQRLENKLIVGRDNK 477

BLAST of Sed0001001 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 3.3e-160
Identity = 266/417 (63.79%), Postives = 337/417 (80.82%), Query Frame = 0

Query: 32  QRDSNKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAVMENLWETALKIFGL 91
           Q D  K LSRILR DAA++ IERKANS+KY  LWPKAVLEALDEA+ EN W++ALKIF L
Sbjct: 24  QVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNL 83

Query: 92  LRQQHWYEPRCQTYTKLLMMLGKCRQPEQASLVFQIMLSEGLKPSIDVYTALVSAYGRSG 151
           LR+QHWYEPRC+TYTKL  +LG C+QP+QASL+F++MLSEGLKP+IDVYT+L+S YG+S 
Sbjct: 84  LRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSE 143

Query: 152 LLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDIFADMSYLGITCNTVTY 211
           LL KA ST++ MKSVSDCKPDV T+++LI CC +L R DL+K I  +MSYLG+ C+TVTY
Sbjct: 144 LLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTY 203

Query: 212 NTIINGFGKAKMFEQMESLLLEMIESATCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQ 271
           NTII+G+GKA MFE+MES+L +MIE    LPD+ T NS I +YGN   + KME WY+ FQ
Sbjct: 204 NTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ 263

Query: 272 LMGIEPDVWTYNTMISAYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIV 331
           LMG++PD+ T+N +I ++GKA MY KM SV++FMEKRFFS T VT N +I+ FG+AG I 
Sbjct: 264 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 323

Query: 332 KMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVLDTSLFNCLI 391
           KM++ F+KMKYQG+KPNS+TYCSLVNAY K+G + K+DS+LRQI NSDVVLDT  FNC+I
Sbjct: 324 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 383

Query: 392 NVYGRAGDVRKMGELFLEMKENKCVPDSITFATMIRALNAQGMTEDAQRLENKLIAS 449
           N YG+AGD+  M EL+++M+E KC PD ITFATMI+   A G+ +  Q LE ++I+S
Sbjct: 384 NAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISS 440

BLAST of Sed0001001 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 369.0 bits (946), Expect = 7.7e-101
Identity = 188/407 (46.19%), Postives = 270/407 (66.34%), Query Frame = 0

Query: 35  SNKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAVMENLWETALKIFGLLRQ 94
           S K +S ILR++A    IE+K  SKK   L P+ VLE+L E +    WE+A+++F LLR+
Sbjct: 86  SRKAISIILRREATKSIIEKKKGSKK---LLPRTVLESLHERITALRWESAIQVFELLRE 145

Query: 95  QHWYEPRCQTYTKLLMMLGKCRQPEQASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLH 154
           Q WY+P    Y KL++MLGKC+QPE+A  +FQ M++EG   + +VYTALVSAY RSG   
Sbjct: 146 QLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFD 205

Query: 155 KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTI 214
            A + ++ MKS  +C+PDVHTYSILI    ++   D ++D+ +DM   GI  NT+TYNT+
Sbjct: 206 AAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTL 265

Query: 215 INGFGKAKMFEQMESLLLEMIESATCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMG 274
           I+ +GKAKMF +MES L++M+    C PD  T NS +RA+G + QIE ME  Y +FQ  G
Sbjct: 266 IDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSG 325

Query: 275 IEPDVWTYNTMISAYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKME 334
           IEP++ T+N ++ +YGK+  Y KM +V+ +M+K  +S TIVT N +ID FGRAG++ +ME
Sbjct: 326 IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 385

Query: 335 EYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVLDTSLFNCLINVY 394
             F+ M+ + + P+ VT CSLV AYG++   +K+  +LR IENSD+ LD   FNCL++ Y
Sbjct: 386 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 445

Query: 395 GRAGDVRKMGELFLEMKENKCVPDSITFATMIRALNAQGMTEDAQRL 442
           GR     +M  +   M++    PD IT+ TM++A    GMT   + L
Sbjct: 446 GRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

BLAST of Sed0001001 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.2e-85
Identity = 155/396 (39.14%), Postives = 244/396 (61.62%), Query Frame = 0

Query: 49  IRAIERKANSKKYNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKL 108
           I+ +++K + +   N W   V E L + + +  W  AL++F +LR+Q +Y+P+  TY KL
Sbjct: 71  IKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKL 130

Query: 109 LMMLGKCRQPEQASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSD 168
           L++LGK  QP +A  +F  ML EGL+P++++YTAL++AY RS L+  A S +D+MKS   
Sbjct: 131 LVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQ 190

Query: 169 CKPDVHTYSILIDCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQME 228
           C+PDV TYS L+  C    + DL+  ++ +M    IT NTVT N +++G+G+   F+QME
Sbjct: 191 CQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250

Query: 229 SLLLEMIESATCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISA 288
            +L +M+ S  C PD+ T N  +  +GN  +I+ ME WY +F+  GIEP+  T+N +I +
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310

Query: 289 YGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPN 348
           YGK RMYDKM SV+ +M K  F  T  T N II+ F   G+   ME  F +M+ +GMK +
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD 370

Query: 349 SVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFL 408
           + T+C L+N Y  +G   KV S ++     ++  +T+ +N +I+   +A D+ +M  +++
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYI 430

Query: 409 EMKENKCVPDSITFATMIRALNAQGMTEDAQRLENK 445
            MKE +CV DS TF  M+ A   +GM +    LE +
Sbjct: 431 RMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQE 466

BLAST of Sed0001001 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.6e-44
Identity = 109/407 (26.78%), Postives = 205/407 (50.37%), Query Frame = 0

Query: 37  KGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAV-MENLWETALKIFGLLRQQ 96
           KGL    + D A+RA +     K Y ++   +V+  +   +  E    +A  +F  L Q+
Sbjct: 143 KGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL-QE 202

Query: 97  HWYEPRCQTYTKLLMMLGKCRQPEQASLVFQIMLSEGLKPSIDVYTALVSAYGRSGL-LH 156
             +     +YT L+       +  +A  VF+ M  +G KP++  Y  +++ +G+ G   +
Sbjct: 203 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 262

Query: 157 KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTI 216
           K  S V++MKS     PD +TY+ LI CC R         +F +M   G + + VTYN +
Sbjct: 263 KITSLVEKMKS-DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 322

Query: 217 INGFGKAKMFEQMESLLLEMIESATCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMG 276
           ++ +GK+   ++   +L EM+ +    P ++T+NS I AY     +++  +  N+    G
Sbjct: 323 LDVYGKSHRPKEAMKVLNEMVLNGFS-PSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 382

Query: 277 IEPDVWTYNTMISAYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKME 336
            +PDV+TY T++S + +A   +  +S+   M      P I T N  I ++G  G   +M 
Sbjct: 383 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 442

Query: 337 EYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVLDTSLFNCLINVY 396
           + F ++   G+ P+ VT+ +L+  +G++G   +V  + ++++ +  V +   FN LI+ Y
Sbjct: 443 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 502

Query: 397 GRAGDVRKMGELFLEMKENKCVPDSITFATMIRALNAQGMTEDAQRL 442
            R G   +   ++  M +    PD  T+ T++ AL   GM E ++++
Sbjct: 503 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546

BLAST of Sed0001001 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-43
Identity = 118/437 (27.00%), Postives = 206/437 (47.14%), Query Frame = 0

Query: 13  SSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEA 72
           SS  +   R S  + +  L R     +SRI  ++  ++ +++     + ++ +       
Sbjct: 52  SSRRKLAERESAERENRVLVRSL---MSRISDREPLVKTLDKYVKVVRCDHCF-----LL 111

Query: 73  LDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQASLVFQIMLSEG 132
            +E    + W   L++F  +++Q WY P    Y+KL+ ++GK  Q   A  +F  M + G
Sbjct: 112 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSG 171

Query: 133 LKPSIDVYTALVSAY----GRSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRR 192
            +P   VY AL++A+     ++  L K    +D+MK +  C+P+V TY+IL+    +  +
Sbjct: 172 CRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGK 231

Query: 193 LDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATCLPDLITFN 252
           +D +  +F D+    ++ +  T+N +++ +GK  M ++ME++L  M  S  C PD+ITFN
Sbjct: 232 VDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFN 291

Query: 253 SFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVSVLNFMEKR 312
             I +YG  ++ EKME+ +        +P + T+N+MI  YGKARM D            
Sbjct: 292 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID------------ 351

Query: 313 FFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKV 372
                                  K E  FKKM      P+ +TY  ++  YG  G++ + 
Sbjct: 352 -----------------------KAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRA 411

Query: 373 DSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSITFATMIRA 432
             I  ++  SD VL  S  N ++ VY R G   +  +LF      +  PD+ T+  + +A
Sbjct: 412 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 444

Query: 433 LNAQGMTEDAQRLENKL 446
                M E  Q L  K+
Sbjct: 472 YTKADMKEQVQILMKKM 444

BLAST of Sed0001001 vs. ExPASy TrEMBL
Match: A0A6J1KQP7 (pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita maxima OX=3661 GN=LOC111497808 PE=4 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 2.8e-231
Identity = 408/452 (90.27%), Postives = 425/452 (94.03%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           MASI  TP FISSS  R L+R+S  QSS+GLQRD  KGLSRILRKDAAIRAIERKANSKK
Sbjct: 1   MASINPTPLFISSSRSRKLNRTSD-QSSDGLQRDLKKGLSRILRKDAAIRAIERKANSKK 60

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWP AVLEALDEA+ ENLWET LKIFGLLRQQHWYEPRC+TYTKLLMMLGKCRQP+Q
Sbjct: 61  YNNLWPSAVLEALDEAIQENLWETTLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPKQ 120

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+FQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAI TVDEMKS+SDCKPDVHTYSILI
Sbjct: 121 ASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAIETVDEMKSISDCKPDVHTYSILI 180

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTR RRLDLLKDI ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 181 DCCTRFRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSC 240

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
           LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPD WTYNTMIS+YGKARMYDKMVS
Sbjct: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVS 300

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIIDVFGRAGNI +MEEYF+KMKYQGMKPNSVTYCSLVNAYG
Sbjct: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIKRMEEYFRKMKYQGMKPNSVTYCSLVNAYG 360

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           K+GNIEKVDSILRQIENSDVVLDT LFNCLINVYG+AGDVRKMGELFLEM+ENKCVPDSI
Sbjct: 361 KAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMEENKCVPDSI 420

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIASRHDK 453
           TFATM+ AL   GMTE AQRLENKLI +R DK
Sbjct: 421 TFATMVHALKTHGMTEAAQRLENKLIVTRDDK 451

BLAST of Sed0001001 vs. ExPASy TrEMBL
Match: A0A6J1HAD9 (pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita moschata OX=3662 GN=LOC111461045 PE=4 SV=1)

HSP 1 Score: 807.7 bits (2085), Expect = 2.4e-230
Identity = 405/452 (89.60%), Postives = 425/452 (94.03%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           MASI  TP FISSS  R L+R+S  QSS+GLQRD  KGLSRILRKDAAIRAIERKANSKK
Sbjct: 27  MASINPTPFFISSSRSRKLNRTSD-QSSDGLQRDPKKGLSRILRKDAAIRAIERKANSKK 86

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWP+AVLEALDEA+ ENLWET LKIFGLLRQQHWYEPRC+TYTKLLMMLGKCRQPEQ
Sbjct: 87  YNNLWPRAVLEALDEAIQENLWETTLKIFGLLRQQHWYEPRCKTYTKLLMMLGKCRQPEQ 146

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+FQIMLSEGLKPSIDVYTALVSAYGRSGLLH+AI TVDEMKS+SDCKPDVHTYSILI
Sbjct: 147 ASLLFQIMLSEGLKPSIDVYTALVSAYGRSGLLHEAIETVDEMKSISDCKPDVHTYSILI 206

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTR RRLDLLKDI ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 207 DCCTRFRRLDLLKDILADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESGSC 266

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
           LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPD WTYNTMIS+YGKARMYDKMVS
Sbjct: 267 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDDWTYNTMISSYGKARMYDKMVS 326

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIIDVFGRAGN+ +MEEYF+KMK+QGMKPNSVTYCSLVNAYG
Sbjct: 327 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNVKRMEEYFRKMKHQGMKPNSVTYCSLVNAYG 386

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           K+GNIEKVDSILRQIENSDVVLDT LFNCLINVYG+AGDVRKMGELFLEMKEN+CVPDSI
Sbjct: 387 KAGNIEKVDSILRQIENSDVVLDTPLFNCLINVYGQAGDVRKMGELFLEMKENRCVPDSI 446

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIASRHDK 453
           TFATM+ AL   GMTE AQRLENKLI  R +K
Sbjct: 447 TFATMVHALKTHGMTEAAQRLENKLIVGRDNK 477

BLAST of Sed0001001 vs. ExPASy TrEMBL
Match: A0A1S3CEG4 (pentatricopeptide repeat-containing protein At3g53170 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499948 PE=4 SV=1)

HSP 1 Score: 793.1 bits (2047), Expect = 6.1e-226
Identity = 399/454 (87.89%), Postives = 422/454 (92.95%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           M S++ TP FISSSH R L RSST QSS+ LQRD  KGLSRILRKDAAI+AIE+KANSKK
Sbjct: 27  MTSMSSTPYFISSSHSRSLKRSST-QSSDALQRDPKKGLSRILRKDAAIKAIEKKANSKK 86

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWPKAVLEALDEA+ ENLWETALKIFGLLRQQ WYEPRCQTYTKLLM+LGKCRQPEQ
Sbjct: 87  YNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQ 146

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+F+IM SEGLKPSIDVYTALVSAYG+SGLLHKAISTVDEMKSVSDCKPDVHTYSILI
Sbjct: 147 ASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 206

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTRLRR DLLK++ ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 207 DCCTRLRRFDLLKELLADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSC 266

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
            PDLITFN+FIRAYGNSEQIEKMEKWY+EFQLMGIEPDVWTYNTMIS+YGKA MYDKM S
Sbjct: 267 PPDLITFNTFIRAYGNSEQIEKMEKWYDEFQLMGIEPDVWTYNTMISSYGKAGMYDKMKS 326

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIID FGR GNI +MEEYFKKMK+QGMKPNSVTYCSLVNAYG
Sbjct: 327 VLNFMEKRFFSPTIVTMNTIIDTFGRTGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYG 386

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           KSG++EK+DSILRQIENSDVV DT LFNCLIN YG+AGDVRKMGELFLEMKENKCVPD I
Sbjct: 387 KSGDLEKIDSILRQIENSDVVPDTPLFNCLINAYGQAGDVRKMGELFLEMKENKCVPDGI 446

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIASRHDKCG 455
           TFATMIRAL AQGMTE AQRLENKLIA+   K G
Sbjct: 447 TFATMIRALKAQGMTEAAQRLENKLIATNDVKPG 479

BLAST of Sed0001001 vs. ExPASy TrEMBL
Match: A0A1S3CFP9 (pentatricopeptide repeat-containing protein At3g53170 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499948 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.8e-225
Identity = 397/448 (88.62%), Postives = 420/448 (93.75%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           M S++ TP FISSSH R L RSST QSS+ LQRD  KGLSRILRKDAAI+AIE+KANSKK
Sbjct: 27  MTSMSSTPYFISSSHSRSLKRSST-QSSDALQRDPKKGLSRILRKDAAIKAIEKKANSKK 86

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWPKAVLEALDEA+ ENLWETALKIFGLLRQQ WYEPRCQTYTKLLM+LGKCRQPEQ
Sbjct: 87  YNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCRQPEQ 146

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+F+IM SEGLKPSIDVYTALVSAYG+SGLLHKAISTVDEMKSVSDCKPDVHTYSILI
Sbjct: 147 ASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 206

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTRLRR DLLK++ ADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 207 DCCTRLRRFDLLKELLADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSC 266

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
            PDLITFN+FIRAYGNSEQIEKMEKWY+EFQLMGIEPDVWTYNTMIS+YGKA MYDKM S
Sbjct: 267 PPDLITFNTFIRAYGNSEQIEKMEKWYDEFQLMGIEPDVWTYNTMISSYGKAGMYDKMKS 326

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIID FGR GNI +MEEYFKKMK+QGMKPNSVTYCSLVNAYG
Sbjct: 327 VLNFMEKRFFSPTIVTMNTIIDTFGRTGNIEEMEEYFKKMKFQGMKPNSVTYCSLVNAYG 386

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           KSG++EK+DSILRQIENSDVV DT LFNCLIN YG+AGDVRKMGELFLEMKENKCVPD I
Sbjct: 387 KSGDLEKIDSILRQIENSDVVPDTPLFNCLINAYGQAGDVRKMGELFLEMKENKCVPDGI 446

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIAS 449
           TFATMIRAL AQGMTE AQRLENKLIA+
Sbjct: 447 TFATMIRALKAQGMTEAAQRLENKLIAT 473

BLAST of Sed0001001 vs. ExPASy TrEMBL
Match: A0A0A0K9Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426480 PE=4 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 4.4e-224
Identity = 395/448 (88.17%), Postives = 420/448 (93.75%), Query Frame = 0

Query: 1   MASITLTPSFISSSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKK 60
           MAS++ TP FISSSH R L R+ST QSS+ LQRD  KGLSRILR+DAAI+AIERKANSKK
Sbjct: 27  MASVSSTPYFISSSHSRSLKRTST-QSSDALQRDPKKGLSRILRRDAAIKAIERKANSKK 86

Query: 61  YNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQ 120
           YNNLWPKAVLEALDEA+ ENLWETALKIFGLLRQQ WYEPRCQTYTKLLM+LGKC+QPEQ
Sbjct: 87  YNNLWPKAVLEALDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQ 146

Query: 121 ASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILI 180
           ASL+F+IM SEGLKPSIDVYTALVSAYG+SGLLHKAISTVDEMKS+SDCKPDVHTYSILI
Sbjct: 147 ASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILI 206

Query: 181 DCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATC 240
           DCCTRLRR DLLK I ADMS LGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES +C
Sbjct: 207 DCCTRLRRFDLLKKILADMSCLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSC 266

Query: 241 LPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVS 300
            PDLITFN+FIRAYGNSEQIEKMEKWY EFQLMGIEPD+WTYN+MIS+YGKA MYDKM S
Sbjct: 267 PPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKS 326

Query: 301 VLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYG 360
           VLNFMEKRFFSPTIVTMNTIID FGRAGNI +MEEYFK MK+QGMKPNSVTYCSLVNAYG
Sbjct: 327 VLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYG 386

Query: 361 KSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSI 420
           KSG++EKVDSILRQIENSDVV DT LFNCLINVYG+AG+VRKMGELFLEMKENKCVPD I
Sbjct: 387 KSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGI 446

Query: 421 TFATMIRALNAQGMTEDAQRLENKLIAS 449
           TFATMIRAL AQGMTEDAQRLENKLIA+
Sbjct: 447 TFATMIRALKAQGMTEDAQRLENKLIAT 473

BLAST of Sed0001001 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 566.6 bits (1459), Expect = 1.8e-161
Identity = 272/447 (60.85%), Postives = 351/447 (78.52%), Query Frame = 0

Query: 3   SITLTPSFISSSHPRP-LSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKKY 62
           +I++TP+  S+  P     + ++   S   Q D  K LSRILR DAA++ IERKANS+KY
Sbjct: 44  TISITPTMCSTKVPNERTEKMNSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKY 103

Query: 63  NNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQA 122
             LWPKAVLEALDEA+ EN W++ALKIF LLR+QHWYEPRC+TYTKL  +LG C+QP+QA
Sbjct: 104 LTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQA 163

Query: 123 SLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSDCKPDVHTYSILID 182
           SL+F++MLSEGLKP+IDVYT+L+S YG+S LL KA ST++ MKSVSDCKPDV T+++LI 
Sbjct: 164 SLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLIS 223

Query: 183 CCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATCL 242
           CC +L R DL+K I  +MSYLG+ C+TVTYNTII+G+GKA MFE+MES+L +MIE    L
Sbjct: 224 CCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSL 283

Query: 243 PDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVSV 302
           PD+ T NS I +YGN   + KME WY+ FQLMG++PD+ T+N +I ++GKA MY KM SV
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343

Query: 303 LNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYGK 362
           ++FMEKRFFS T VT N +I+ FG+AG I KM++ F+KMKYQG+KPNS+TYCSLVNAY K
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403

Query: 363 SGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSIT 422
           +G + K+DS+LRQI NSDVVLDT  FNC+IN YG+AGD+  M EL+++M+E KC PD IT
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463

Query: 423 FATMIRALNAQGMTEDAQRLENKLIAS 449
           FATMI+   A G+ +  Q LE ++I+S
Sbjct: 464 FATMIKTYTAHGIFDAVQELEKQMISS 490

BLAST of Sed0001001 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 369.0 bits (946), Expect = 5.5e-102
Identity = 188/407 (46.19%), Postives = 270/407 (66.34%), Query Frame = 0

Query: 35  SNKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAVMENLWETALKIFGLLRQ 94
           S K +S ILR++A    IE+K  SKK   L P+ VLE+L E +    WE+A+++F LLR+
Sbjct: 86  SRKAISIILRREATKSIIEKKKGSKK---LLPRTVLESLHERITALRWESAIQVFELLRE 145

Query: 95  QHWYEPRCQTYTKLLMMLGKCRQPEQASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLH 154
           Q WY+P    Y KL++MLGKC+QPE+A  +FQ M++EG   + +VYTALVSAY RSG   
Sbjct: 146 QLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFD 205

Query: 155 KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTI 214
            A + ++ MKS  +C+PDVHTYSILI    ++   D ++D+ +DM   GI  NT+TYNT+
Sbjct: 206 AAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTL 265

Query: 215 INGFGKAKMFEQMESLLLEMIESATCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMG 274
           I+ +GKAKMF +MES L++M+    C PD  T NS +RA+G + QIE ME  Y +FQ  G
Sbjct: 266 IDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSG 325

Query: 275 IEPDVWTYNTMISAYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKME 334
           IEP++ T+N ++ +YGK+  Y KM +V+ +M+K  +S TIVT N +ID FGRAG++ +ME
Sbjct: 326 IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 385

Query: 335 EYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVLDTSLFNCLINVY 394
             F+ M+ + + P+ VT CSLV AYG++   +K+  +LR IENSD+ LD   FNCL++ Y
Sbjct: 386 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 445

Query: 395 GRAGDVRKMGELFLEMKENKCVPDSITFATMIRALNAQGMTEDAQRL 442
           GR     +M  +   M++    PD IT+ TM++A    GMT   + L
Sbjct: 446 GRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489

BLAST of Sed0001001 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 318.5 bits (815), Expect = 8.5e-87
Identity = 155/396 (39.14%), Postives = 244/396 (61.62%), Query Frame = 0

Query: 49  IRAIERKANSKKYNNLWPKAVLEALDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKL 108
           I+ +++K + +   N W   V E L + + +  W  AL++F +LR+Q +Y+P+  TY KL
Sbjct: 71  IKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKL 130

Query: 109 LMMLGKCRQPEQASLVFQIMLSEGLKPSIDVYTALVSAYGRSGLLHKAISTVDEMKSVSD 168
           L++LGK  QP +A  +F  ML EGL+P++++YTAL++AY RS L+  A S +D+MKS   
Sbjct: 131 LVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQ 190

Query: 169 CKPDVHTYSILIDCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQME 228
           C+PDV TYS L+  C    + DL+  ++ +M    IT NTVT N +++G+G+   F+QME
Sbjct: 191 CQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250

Query: 229 SLLLEMIESATCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISA 288
            +L +M+ S  C PD+ T N  +  +GN  +I+ ME WY +F+  GIEP+  T+N +I +
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310

Query: 289 YGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPN 348
           YGK RMYDKM SV+ +M K  F  T  T N II+ F   G+   ME  F +M+ +GMK +
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD 370

Query: 349 SVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFL 408
           + T+C L+N Y  +G   KV S ++     ++  +T+ +N +I+   +A D+ +M  +++
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYI 430

Query: 409 EMKENKCVPDSITFATMIRALNAQGMTEDAQRLENK 445
            MKE +CV DS TF  M+ A   +GM +    LE +
Sbjct: 431 RMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQE 466

BLAST of Sed0001001 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 6.1e-45
Identity = 109/407 (26.78%), Postives = 205/407 (50.37%), Query Frame = 0

Query: 37  KGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEALDEAV-MENLWETALKIFGLLRQQ 96
           KGL    + D A+RA +     K Y ++   +V+  +   +  E    +A  +F  L Q+
Sbjct: 143 KGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL-QE 202

Query: 97  HWYEPRCQTYTKLLMMLGKCRQPEQASLVFQIMLSEGLKPSIDVYTALVSAYGRSGL-LH 156
             +     +YT L+       +  +A  VF+ M  +G KP++  Y  +++ +G+ G   +
Sbjct: 203 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 262

Query: 157 KAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRRLDLLKDIFADMSYLGITCNTVTYNTI 216
           K  S V++MKS     PD +TY+ LI CC R         +F +M   G + + VTYN +
Sbjct: 263 KITSLVEKMKS-DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 322

Query: 217 INGFGKAKMFEQMESLLLEMIESATCLPDLITFNSFIRAYGNSEQIEKMEKWYNEFQLMG 276
           ++ +GK+   ++   +L EM+ +    P ++T+NS I AY     +++  +  N+    G
Sbjct: 323 LDVYGKSHRPKEAMKVLNEMVLNGFS-PSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 382

Query: 277 IEPDVWTYNTMISAYGKARMYDKMVSVLNFMEKRFFSPTIVTMNTIIDVFGRAGNIVKME 336
            +PDV+TY T++S + +A   +  +S+   M      P I T N  I ++G  G   +M 
Sbjct: 383 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 442

Query: 337 EYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKVDSILRQIENSDVVLDTSLFNCLINVY 396
           + F ++   G+ P+ VT+ +L+  +G++G   +V  + ++++ +  V +   FN LI+ Y
Sbjct: 443 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 502

Query: 397 GRAGDVRKMGELFLEMKENKCVPDSITFATMIRALNAQGMTEDAQRL 442
            R G   +   ++  M +    PD  T+ T++ AL   GM E ++++
Sbjct: 503 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546

BLAST of Sed0001001 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-44
Identity = 118/437 (27.00%), Postives = 206/437 (47.14%), Query Frame = 0

Query: 13  SSHPRPLSRSSTAQSSNGLQRDSNKGLSRILRKDAAIRAIERKANSKKYNNLWPKAVLEA 72
           SS  +   R S  + +  L R     +SRI  ++  ++ +++     + ++ +       
Sbjct: 52  SSRRKLAERESAERENRVLVRSL---MSRISDREPLVKTLDKYVKVVRCDHCF-----LL 111

Query: 73  LDEAVMENLWETALKIFGLLRQQHWYEPRCQTYTKLLMMLGKCRQPEQASLVFQIMLSEG 132
            +E    + W   L++F  +++Q WY P    Y+KL+ ++GK  Q   A  +F  M + G
Sbjct: 112 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSG 171

Query: 133 LKPSIDVYTALVSAY----GRSGLLHKAISTVDEMKSVSDCKPDVHTYSILIDCCTRLRR 192
            +P   VY AL++A+     ++  L K    +D+MK +  C+P+V TY+IL+    +  +
Sbjct: 172 CRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGK 231

Query: 193 LDLLKDIFADMSYLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESATCLPDLITFN 252
           +D +  +F D+    ++ +  T+N +++ +GK  M ++ME++L  M  S  C PD+ITFN
Sbjct: 232 VDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFN 291

Query: 253 SFIRAYGNSEQIEKMEKWYNEFQLMGIEPDVWTYNTMISAYGKARMYDKMVSVLNFMEKR 312
             I +YG  ++ EKME+ +        +P + T+N+MI  YGKARM D            
Sbjct: 292 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID------------ 351

Query: 313 FFSPTIVTMNTIIDVFGRAGNIVKMEEYFKKMKYQGMKPNSVTYCSLVNAYGKSGNIEKV 372
                                  K E  FKKM      P+ +TY  ++  YG  G++ + 
Sbjct: 352 -----------------------KAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRA 411

Query: 373 DSILRQIENSDVVLDTSLFNCLINVYGRAGDVRKMGELFLEMKENKCVPDSITFATMIRA 432
             I  ++  SD VL  S  N ++ VY R G   +  +LF      +  PD+ T+  + +A
Sbjct: 412 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 444

Query: 433 LNAQGMTEDAQRLENKL 446
                M E  Q L  K+
Sbjct: 472 YTKADMKEQVQILMKKM 444

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6593286.14.5e-23190.04Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG7025638.15.8e-23190.04Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023004532.15.8e-23190.27pentatricopeptide repeat-containing protein At3g53170 [Cucurbita maxima][more]
XP_023515060.15.8e-23190.04pentatricopeptide repeat-containing protein At3g53170 [Cucurbita pepo subsp. pep... [more]
XP_022960242.14.9e-23089.60pentatricopeptide repeat-containing protein At3g53170 [Cucurbita moschata] >XP_0... [more]
Match NameE-valueIdentityDescription
Q9SCP43.3e-16063.79Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... [more]
Q9FKC37.7e-10146.19Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
Q9SQU61.2e-8539.14Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
Q9LYZ98.6e-4426.78Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q9SV961.5e-4327.00Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1KQP72.8e-23190.27pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita maxima OX=366... [more]
A0A6J1HAD92.4e-23089.60pentatricopeptide repeat-containing protein At3g53170 OS=Cucurbita moschata OX=3... [more]
A0A1S3CEG46.1e-22687.89pentatricopeptide repeat-containing protein At3g53170 isoform X1 OS=Cucumis melo... [more]
A0A1S3CFP91.8e-22588.62pentatricopeptide repeat-containing protein At3g53170 isoform X2 OS=Cucumis melo... [more]
A0A0A0K9Q14.4e-22488.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426480 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G53170.11.8e-16160.85Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48730.15.5e-10246.19Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G06430.18.5e-8739.14Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.16.1e-4526.78Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G39620.11.0e-4427.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 104..133
e-value: 0.068
score: 13.5
coord: 209..236
e-value: 1.9E-6
score: 27.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 312..360
e-value: 4.8E-11
score: 42.7
coord: 383..429
e-value: 2.2E-11
score: 43.8
coord: 242..288
e-value: 7.1E-11
score: 42.1
coord: 135..183
e-value: 2.7E-11
score: 43.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 139..173
e-value: 1.3E-6
score: 26.2
coord: 209..243
e-value: 4.3E-8
score: 30.9
coord: 281..313
e-value: 5.9E-9
score: 33.6
coord: 350..384
e-value: 1.8E-6
score: 25.8
coord: 315..348
e-value: 5.4E-7
score: 27.4
coord: 104..136
e-value: 6.9E-4
score: 17.6
coord: 174..203
e-value: 2.8E-4
score: 18.9
coord: 386..419
e-value: 1.2E-9
score: 35.7
coord: 245..279
e-value: 7.3E-7
score: 27.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 136..166
score: 8.53891
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..347
score: 10.676364
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 278..312
score: 11.355965
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..206
score: 9.306201
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 348..382
score: 10.106377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..417
score: 11.498462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 101..135
score: 9.328124
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 207..241
score: 10.194067
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 243..277
score: 10.314641
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 31..197
e-value: 2.9E-35
score: 123.5
coord: 378..448
e-value: 4.7E-15
score: 57.6
coord: 307..377
e-value: 4.4E-18
score: 67.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 198..306
e-value: 8.9E-30
score: 106.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 20..450
NoneNo IPR availablePANTHERPTHR47933:SF35OS03G0115300 PROTEINcoord: 20..450

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0001001.1Sed0001001.1mRNA
Sed0001001.2Sed0001001.2mRNA
Sed0001001.3Sed0001001.3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding