Sed0000992 (gene) Chayote v1

Overview


Name	Sed0000992
Type	gene
Organism	Sechium edule (Chayote v1)
Description	dof zinc finger protein DOF1.7-like
Location	LG06: 601174 .. 602761 (+)
RNA-Seq Expression	Sed0000992
Synteny	Sed0000992

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACAAGCTTAGAGAGAGAGAGAAAAAAAAACAAAAAAGAAAAACAAATTCTCAATTGTAATTGAGAGAGAGAAAAAATTATTAAAAAAAATTCTTCAATCTTCATCTCTTTATATGTGTCGACTGCTCGCTCTTTCACACGCTAATATCTCAACAAATTTCCCCTATCAAAAAAAGTTCCCGTCGCCGTCGCCGTCGCCGGCGATTCTCCCTTTTTCCGACATCCCTAAATCACACAGAAACCAAAACACAAAAACAGCTGAGCTTTTTGTGTTTTTCTTTTGTAAAAAAGTTGCACGTTTTTCCATTGATTTCCTTTTTGGAAGCCATGAAAAGTTGAAAACTACGCCTTCAATCTTCTCTTTACACTTTTTTCCCTTTTTGCTCTGTTTTTTTTTCTTCACCAAAATCTCCAAAAACCCAATTTTTTTTTTCGATTTTCGTGCTCTGTTTTGATTTTGATTTTCTGGGTAACCAAACAATGCAAGACCCATCAAATTTTCCGGCGATTAAACCCCAATTTCCCGAACAAGAACAGCTGAAATGCCCTCGTTGTGATTCTACAAACACCAAATTCTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGCCGTTACTGGACCAAAGGCGGCGCTCTCAGAAACATCCCCGTCGGCGGCGGCACCCGGAAAAACTCCAAGCGGTCGTCGCCGGCGACGGCGGCGGCTATCGTGAAAACCCCGCCGTCCTCCTCCTCCGCTTCTTTTACCCCGATTCCGATCACGGGCCCCGGTTCGGGTCATGATCCGACCCGGATCTACGGCGGTGGCGGGCTGAATATTCCGGGGAGTTTCAGCTCGTTGCTGAATGGGAAATTTGGGAATTTCATGGAGGGTGTGGATCCGAATCAACCGGAGATGAAAATGGTGGAACTGGGTGGATTTTCAGGGGATTTGAATTCTGGGTCTGGCCGGAGAACTGCGGCGGAGGAACAGAGCGCCGCCGTGCCGGGGAATTATTTGGGCGATTCTAGTTGCTGGACCGGCGGCGGGAGTAATGGGTGGCCGGATCTTGCTATTTTCACACCCGGTTCGAGCTATCAGTAAACAGAGATGAAAAACAGAGGAAAAATCAGCCATTGTTGATGTTATTGAAGCTTCTGTTAGAAGAAGGTGGAACAGACACATTACAAGACCACAGAATTCATATGACCAAAAAAAAATTATTGAAAATCCTTTGTTCTTGTGTGTTCTTGTCTTTTTTGTTTTTTTTTCAATTTTAGTTTGATGTGTTGTGAAGTTTTATGAAGGAATGGATTGGGATGAAAAGAATCACAAACTGAAATAGATCTGAATTTTTGTTGCATTTTACATTTTTTTTTTCCAGTTAGTGGAGGTTGGGATTTTGCAATTAGTTTATTTTTGTGATTTATTTTTATTTTATTTAAATCATTAACATTTATAATAGGAGGATATGAATAGTATTTTGATTTATACATTGTATGGTTATGGTTGAGGTTATGTTCTTGTTAATTTTGATTTTTCAACTTTTTTTTTTGGGAAAGATGCACTCGAGAAGGAAGAAT

mRNA sequence

GAAACAAGCTTAGAGAGAGAGAGAAAAAAAAACAAAAAAGAAAAACAAATTCTCAATTGTAATTGAGAGAGAGAAAAAATTATTAAAAAAAATTCTTCAATCTTCATCTCTTTATATGTGTCGACTGCTCGCTCTTTCACACGCTAATATCTCAACAAATTTCCCCTATCAAAAAAAGTTCCCGTCGCCGTCGCCGTCGCCGGCGATTCTCCCTTTTTCCGACATCCCTAAATCACACAGAAACCAAAACACAAAAACAGCTGAGCTTTTTGTGTTTTTCTTTTGTAAAAAAGTTGCACGTTTTTCCATTGATTTCCTTTTTGGAAGCCATGAAAAGTTGAAAACTACGCCTTCAATCTTCTCTTTACACTTTTTTCCCTTTTTGCTCTGTTTTTTTTTCTTCACCAAAATCTCCAAAAACCCAATTTTTTTTTTCGATTTTCGTGCTCTGTTTTGATTTTGATTTTCTGGGTAACCAAACAATGCAAGACCCATCAAATTTTCCGGCGATTAAACCCCAATTTCCCGAACAAGAACAGCTGAAATGCCCTCGTTGTGATTCTACAAACACCAAATTCTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGCCGTTACTGGACCAAAGGCGGCGCTCTCAGAAACATCCCCGTCGGCGGCGGCACCCGGAAAAACTCCAAGCGGTCGTCGCCGGCGACGGCGGCGGCTATCGTGAAAACCCCGCCGTCCTCCTCCTCCGCTTCTTTTACCCCGATTCCGATCACGGGCCCCGGTTCGGGTCATGATCCGACCCGGATCTACGGCGGTGGCGGGCTGAATATTCCGGGGAGTTTCAGCTCGTTGCTGAATGGGAAATTTGGGAATTTCATGGAGGGTGTGGATCCGAATCAACCGGAGATGAAAATGGTGGAACTGGGTGGATTTTCAGGGGATTTGAATTCTGGGTCTGGCCGGAGAACTGCGGCGGAGGAACAGAGCGCCGCCGTGCCGGGGAATTATTTGGGCGATTCTAGTTGCTGGACCGGCGGCGGGAGTAATGGGTGGCCGGATCTTGCTATTTTCACACCCGGTTCGAGCTATCAGTAAACAGAGATGAAAAACAGAGGAAAAATCAGCCATTGTTGATGTTATTGAAGCTTCTGTTAGAAGAAGGTGGAACAGACACATTACAAGACCACAGAATTCATATGACCAAAAAAAAATTATTGAAAATCCTTTGTTCTTGTGTGTTCTTGTCTTTTTTGTTTTTTTTTCAATTTTAGTTTGATGTGTTGTGAAGTTTTATGAAGGAATGGATTGGGATGAAAAGAATCACAAACTGAAATAGATCTGAATTTTTGTTGCATTTTACATTTTTTTTTTCCAGTTAGTGGAGGTTGGGATTTTGCAATTAGTTTATTTTTGTGATTTATTTTTATTTTATTTAAATCATTAACATTTATAATAGGAGGATATGAATAGTATTTTGATTTATACATTGTATGGTTATGGTTGAGGTTATGTTCTTGTTAATTTTGATTTTTCAACTTTTTTTTTTGGGAAAGATGCACTCGAGAAGGAAGAAT

Coding sequence (CDS)

ATGCAAGACCCATCAAATTTTCCGGCGATTAAACCCCAATTTCCCGAACAAGAACAGCTGAAATGCCCTCGTTGTGATTCTACAAACACCAAATTCTGCTATTACAATAACTATAATCTTTCTCAGCCTCGTCACTTTTGTAAGAATTGCCGCCGTTACTGGACCAAAGGCGGCGCTCTCAGAAACATCCCCGTCGGCGGCGGCACCCGGAAAAACTCCAAGCGGTCGTCGCCGGCGACGGCGGCGGCTATCGTGAAAACCCCGCCGTCCTCCTCCTCCGCTTCTTTTACCCCGATTCCGATCACGGGCCCCGGTTCGGGTCATGATCCGACCCGGATCTACGGCGGTGGCGGGCTGAATATTCCGGGGAGTTTCAGCTCGTTGCTGAATGGGAAATTTGGGAATTTCATGGAGGGTGTGGATCCGAATCAACCGGAGATGAAAATGGTGGAACTGGGTGGATTTTCAGGGGATTTGAATTCTGGGTCTGGCCGGAGAACTGCGGCGGAGGAACAGAGCGCCGCCGTGCCGGGGAATTATTTGGGCGATTCTAGTTGCTGGACCGGCGGCGGGAGTAATGGGTGGCCGGATCTTGCTATTTTCACACCCGGTTCGAGCTATCAGTAA

Protein sequence

MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPIPITGPGSGHDPTRIYGGGGLNIPGSFSSLLNGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAAVPGNYLGDSSCWTGGGSNGWPDLAIFTPGSSYQ

Homology

[Close]

BLAST of Sed0000992 vs. NCBI nr
Match: XP_023523362.1 (dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.9 bits (834), Expect = 2.6e-85
Identity = 167/217 (76.96%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPI--PITGPGSGHDPTRIYGGGG 120
           RNIPVGGG+RKN+KR  PA +A + + P SSSS+S   +  PI GP   H+P R Y GGG
Sbjct: 61  RNIPVGGGSRKNAKR--PAVSATVKRPPSSSSSSSSGSMLNPIAGP--DHNPIRGY-GGG 120

Query: 121 LNIPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAAV 180
           L IPGSFSSLL  NG++GN +E +DPNQPEMKM+ELGGFSG+LNSGSGR++AAEEQS  V
Sbjct: 121 LEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSGNLNSGSGRKSAAEEQSGCV 180

Query: 181 PGNYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           P NYL     GDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 PENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0000992 vs. NCBI nr
Match: KAG6606726.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.5 bits (833), Expect = 3.4e-85
Identity = 171/218 (78.44%), Postives = 184/218 (84.40%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSAS---FTPIPITGPGSGHDPTRIYGGG 120
           RNIPVGGG+RKN+KR  PA +A  VK PPSSSS+S    T  PITGP   H+P R Y GG
Sbjct: 61  RNIPVGGGSRKNAKR--PAVSAT-VKRPPSSSSSSSSGSTLNPITGP--DHNPIRGY-GG 120

Query: 121 GLNIPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAA 180
           GL IPGSFSSLL  NG++GN +E +DPNQPEMKM+ELGGFS +LNSGSGR++AAEEQS  
Sbjct: 121 GLEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGC 180

Query: 181 VPGNYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           VP NYL     GDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 VPENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0000992 vs. NCBI nr
Match: KAG7036441.1 (Dof zinc finger protein DOF1.7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 5.8e-85
Identity = 167/217 (76.96%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPI--PITGPGSGHDPTRIYGGGG 120
           RNIPVGGG+RKN+KR  PA +A + + P SSSS+S   +  PITGP   H+P R Y GGG
Sbjct: 61  RNIPVGGGSRKNAKR--PAVSATVKRPPSSSSSSSSGSMLNPITGP--DHNPIRGY-GGG 120

Query: 121 LNIPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAAV 180
           L IPGSFSSLL  NG++GN +E +DPNQPEMKM+ELGGFS +LNSGSGR++AAEEQS  V
Sbjct: 121 LEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCV 180

Query: 181 PGNYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           P NYL     GDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 PENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0000992 vs. NCBI nr
Match: XP_022948818.1 (dof zinc finger protein DOF1.7-like [Cucurbita moschata])

HSP 1 Score: 323.6 bits (828), Expect = 1.3e-84
Identity = 166/217 (76.50%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP IKPQ+PEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQYPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPI--PITGPGSGHDPTRIYGGGG 120
           RNIPVGGG+RKN+KR  PA +A + + P SSSS+S   +  PITGP   H+P R Y GGG
Sbjct: 61  RNIPVGGGSRKNAKR--PAVSATVKRPPSSSSSSSSGSMLNPITGP--DHNPIRGY-GGG 120

Query: 121 LNIPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAAV 180
           L IPGSFSSLL  NG++GN +E +DPNQPEMKM+ELGGFS +LNSGSGR++AAEEQS  V
Sbjct: 121 LEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCV 180

Query: 181 PGNYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           P NYL     GDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 PENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0000992 vs. NCBI nr
Match: XP_022997902.1 (dof zinc finger protein DOF1.7-like [Cucurbita maxima])

HSP 1 Score: 322.8 bits (826), Expect = 2.2e-84
Identity = 168/218 (77.06%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPI---PITGPGSGHDPTRIYGGG 120
           RNIPVGGG+RKN+KR + +T    VK PPSSSS+S +     PITGP   H+P R Y GG
Sbjct: 61  RNIPVGGGSRKNAKRPAVSTT---VKRPPSSSSSSSSGSMRNPITGP--DHNPIRGY-GG 120

Query: 121 GLNIPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAA 180
           GL IPGSFSSLL  NG++GN +EG+DPNQPEMKM+ELGGFS +L SGSGR++AAEEQS  
Sbjct: 121 GLEIPGSFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGSGRKSAAEEQSGC 180

Query: 181 VPGNYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           VP NYL     GDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 VPENYLGMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0000992 vs. ExPASy Swiss-Prot
Match: Q94AR6 (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-33
Identity = 78/132 (59.09%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +PQF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CRRYWTKGGALRN+PVGGG+R
Sbjct: 20  QPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSR 79

Query: 71  KN-SKRSSPATAAAIVKTPPSSSSASFTPIPITGPGSGH----DPTRIYGG--------G 130
           KN +KRS+ ++++A   +  S +  +  P P   P +      DPTR+  G         
Sbjct: 80  KNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKPDLDPTRMLYGFPIGDQDVK 139

[Close]

BLAST of Sed0000992 vs. ExPASy Swiss-Prot
Match: O82155 (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-31
Identity = 74/125 (59.20%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR
Sbjct: 24  QPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83

Query: 71  KNSKRSSPATAAAI----VKTPPSSSSASFTPIPITGPGSGHDPTRIYGGGGLNIP--GS 130
           K++KRS  + ++ +    V   P    +          G   +PTR+  G  +  P   S
Sbjct: 84  KSNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGAS 143

[Close]

BLAST of Sed0000992 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 5.2e-28
Identity = 91/234 (38.89%), Postives = 119/234 (50.85%), Query Frame = 0


Query: 12  PQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 71
           P   +QEQL CPRCDS+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTRK
Sbjct: 22  PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query: 72  NSKRS---SPATAAAIVKTPPSSSSASFTPIPITGP------GSGHDPTRIYG-GGGLNI 131
           ++KRS   S ++++++     +S+       P+  P      G  H  T   G G  L++
Sbjct: 82  SAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESDGKGSALSL 141

Query: 132 PGSFSSLLNGKFGNFMEGVDPNQPEMKMVELGGFS-------GDLNSGSGR-----RTAA 191
            GSF+S L     N             ++ +GGF         D++ G GR      T  
Sbjct: 142 CGSFTSTLL----NHNAAATATHGSGSVIGIGGFGIGLGSGFDDVSFGLGRAMWPFSTVG 201

Query: 192 EEQSAAVPGN-------------YLGDSSCWTGGGSNG----WPDLAIFTPGSS 207
              +  V  N             + G  S   GG  +G    WPDL+I TPG+S
Sbjct: 202 TATTTNVGSNGGHHAVPMPATWQFEGLESNAGGGFVSGEYFAWPDLSITTPGNS 251

[Close]

BLAST of Sed0000992 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.3e-26
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 4   PSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNI 63
           PS   A+    P +  L+CPRCDSTNTKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRNI
Sbjct: 39  PSPATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNI 98

Query: 64  PVGGGTRKNSKRSSPATAAAIVKTPPSSS 93
           PVGGG RKN KRS+ + A ++  TP  +S
Sbjct: 99  PVGGGCRKN-KRSTSSAARSLRTTPEPAS 126

[Close]

BLAST of Sed0000992 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +PQ  +++ L CPRC+STNTKFCYYNNY+L QPR+FCK CRRYWT+GG+LRN+PVGGG+R
Sbjct: 71  RPQ--KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSR 130

Query: 71  KNSKRSSPATAAAIVKTPPSSS---SASFT-PIPITGPGSGHDPTRIYGG---------- 130
           KN + SS A +A+      ++S   SAS +  +  TG G+  +P  ++ G          
Sbjct: 131 KNKRSSSSAASASPASASTANSVVTSASMSMSMASTGGGASKNPKLVHEGAQDLNLAFPH 190

Query: 131 -GGLNIPGSFSSLLNGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAE 171
            GGL  PG F +              P+     +   GG  G    G G  +A E
Sbjct: 191 HGGLQAPGEFPAF-------------PSLESSSVCNPGGPMGTNGRGGGALSAME 230

[Close]

BLAST of Sed0000992 vs. ExPASy TrEMBL
Match: A0A6J1GAD4 (dof zinc finger protein DOF1.7-like OS=Cucurbita moschata OX=3662 GN=LOC111452370 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.2e-85
Identity = 166/217 (76.50%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP IKPQ+PEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQYPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPI--PITGPGSGHDPTRIYGGGG 120
           RNIPVGGG+RKN+KR  PA +A + + P SSSS+S   +  PITGP   H+P R Y GGG
Sbjct: 61  RNIPVGGGSRKNAKR--PAVSATVKRPPSSSSSSSSGSMLNPITGP--DHNPIRGY-GGG 120

Query: 121 LNIPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAAV 180
           L IPGSFSSLL  NG++GN +E +DPNQPEMKM+ELGGFS +LNSGSGR++AAEEQS  V
Sbjct: 121 LEIPGSFSSLLASNGQYGNLLESMDPNQPEMKMMELGGFSENLNSGSGRKSAAEEQSGCV 180

Query: 181 PGNYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           P NYL     GDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 PENYLGVLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0000992 vs. ExPASy TrEMBL
Match: A0A6J1K6C2 (dof zinc finger protein DOF1.7-like OS=Cucurbita maxima OX=3661 GN=LOC111492715 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 168/218 (77.06%), Postives = 183/218 (83.94%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS FP IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFPMIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPI---PITGPGSGHDPTRIYGGG 120
           RNIPVGGG+RKN+KR + +T    VK PPSSSS+S +     PITGP   H+P R Y GG
Sbjct: 61  RNIPVGGGSRKNAKRPAVSTT---VKRPPSSSSSSSSGSMRNPITGP--DHNPIRGY-GG 120

Query: 121 GLNIPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAA 180
           GL IPGSFSSLL  NG++GN +EG+DPNQPEMKM+ELGGFS +L SGSGR++AAEEQS  
Sbjct: 121 GLEIPGSFSSLLASNGQYGNLLEGMDPNQPEMKMMELGGFSENLISGSGRKSAAEEQSGC 180

Query: 181 VPGNYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           VP NYL     GDSSCWTGGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 VPENYLGMLQNGDSSCWTGGGSNGWPDLAIFTPGSSYQ 212

[Close]

BLAST of Sed0000992 vs. ExPASy TrEMBL
Match: A0A5A7UYP4 (Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold348G00020 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 165/215 (76.74%), Postives = 177/215 (82.33%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS F  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPIPITGPGSGHDPTRIYGGGGLN 120
           RNIPVGGGTRKNSKR+     AA VK PPSSSS++  P PI  P   H+P R Y GGGL+
Sbjct: 61  RNIPVGGGTRKNSKRA----VAATVKRPPSSSSSTH-PNPIAVP--DHNPIRGY-GGGLD 120

Query: 121 IPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAAVPG 180
           IPGSFSSLL  NG+FGN +EGVDPNQ E+KMVELG F     SGSGR++AAEEQSA VP 
Sbjct: 121 IPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSATVPE 180

Query: 181 NYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           NYL     GDS+CW+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 NYLGVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Sed0000992 vs. ExPASy TrEMBL
Match: A0A1S3BHT0 (dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 165/215 (76.74%), Postives = 177/215 (82.33%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS F  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPIPITGPGSGHDPTRIYGGGGLN 120
           RNIPVGGGTRKNSKR+     AA VK PPSSSS++  P PI  P   H+P R Y GGGL+
Sbjct: 61  RNIPVGGGTRKNSKRA----VAATVKRPPSSSSSTH-PNPIAVP--DHNPIRGY-GGGLD 120

Query: 121 IPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAAVPG 180
           IPGSFSSLL  NG+FGN +EGVDPNQ E+KMVELG F     SGSGR++AAEEQSA VP 
Sbjct: 121 IPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSATVPE 180

Query: 181 NYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           NYL     GDS+CW+GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 NYLGVLQNGDSNCWSGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Sed0000992 vs. ExPASy TrEMBL
Match: A0A0A0LDG2 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80
Identity = 164/215 (76.28%), Postives = 176/215 (81.86%), Query Frame = 0


Query: 1   MQDPSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60
           MQDPS F  IKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL
Sbjct: 1   MQDPSTFQPIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGAL 60

Query: 61  RNIPVGGGTRKNSKRSSPATAAAIVKTPPSSSSASFTPIPITGPGSGHDPTRIYGGGGLN 120
           RNIPVGGGTRKNSKR+     AA VK PPSS+S++  P  IT P   H+P R Y GGGL+
Sbjct: 61  RNIPVGGGTRKNSKRA----VAATVKRPPSSTSSTH-PNTITVP--DHNPIRGY-GGGLD 120

Query: 121 IPGSFSSLL--NGKFGNFMEGVDPNQPEMKMVELGGFSGDLNSGSGRRTAAEEQSAAVPG 180
           IPGSFSSLL  NG+FGN +EGVDPNQ E+KMVELG F     SGSGR++AAEEQSA VP 
Sbjct: 121 IPGSFSSLLASNGQFGNLLEGVDPNQSEVKMVELGEF-----SGSGRKSAAEEQSAGVPE 180

Query: 181 NYL-----GDSSCWTGGGSNGWPDLAIFTPGSSYQ 209
           NYL     GDS+CW GGGSNGWPDLAIFTPGSSYQ
Sbjct: 181 NYLGVLQNGDSNCWNGGGSNGWPDLAIFTPGSSYQ 202

[Close]

BLAST of Sed0000992 vs. TAIR 10
Match: AT3G21270.1 (DOF zinc finger protein 2 )

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34
Identity = 78/132 (59.09%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +PQF EQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCK+CRRYWTKGGALRN+PVGGG+R
Sbjct: 20  QPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSR 79

Query: 71  KN-SKRSSPATAAAIVKTPPSSSSASFTPIPITGPGSGH----DPTRIYGG--------G 130
           KN +KRS+ ++++A   +  S +  +  P P   P +      DPTR+  G         
Sbjct: 80  KNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKPDLDPTRMLYGFPIGDQDVK 139

[Close]

BLAST of Sed0000992 vs. TAIR 10
Match: AT1G51700.1 (DOF zinc finger protein 1 )

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-32
Identity = 74/125 (59.20%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 11  KPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 70
           +P+ PEQEQLKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR
Sbjct: 24  QPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83

Query: 71  KNSKRSSPATAAAI----VKTPPSSSSASFTPIPITGPGSGHDPTRIYGGGGLNIP--GS 130
           K++KRS  + ++ +    V   P    +          G   +PTR+  G  +  P   S
Sbjct: 84  KSNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGAS 143

[Close]

BLAST of Sed0000992 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-29
Identity = 91/234 (38.89%), Postives = 119/234 (50.85%), Query Frame = 0


Query: 12  PQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRK 71
           P   +QEQL CPRCDS+NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTRK
Sbjct: 22  PISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRK 81

Query: 72  NSKRS---SPATAAAIVKTPPSSSSASFTPIPITGP------GSGHDPTRIYG-GGGLNI 131
           ++KRS   S ++++++     +S+       P+  P      G  H  T   G G  L++
Sbjct: 82  SAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISNGVTHTVTESDGKGSALSL 141

Query: 132 PGSFSSLLNGKFGNFMEGVDPNQPEMKMVELGGFS-------GDLNSGSGR-----RTAA 191
            GSF+S L     N             ++ +GGF         D++ G GR      T  
Sbjct: 142 CGSFTSTLL----NHNAAATATHGSGSVIGIGGFGIGLGSGFDDVSFGLGRAMWPFSTVG 201

Query: 192 EEQSAAVPGN-------------YLGDSSCWTGGGSNG----WPDLAIFTPGSS 207
              +  V  N             + G  S   GG  +G    WPDL+I TPG+S
Sbjct: 202 TATTTNVGSNGGHHAVPMPATWQFEGLESNAGGGFVSGEYFAWPDLSITTPGNS 251

[Close]

BLAST of Sed0000992 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-27
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 4   PSNFPAIKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNI 63
           PS   A+    P +  L+CPRCDSTNTKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRNI
Sbjct: 39  PSPATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNI 98

Query: 64  PVGGGTRKNSKRSSPATAAAIVKTPPSSS 93
           PVGGG RKN KRS+ + A ++  TP  +S
Sbjct: 99  PVGGGCRKN-KRSTSSAARSLRTTPEPAS 126

[Close]

BLAST of Sed0000992 vs. TAIR 10
Match: AT2G46590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-26
Identity = 53/75 (70.67%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 17  QEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNSKRS 76
           QE+L CPRC+STNTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG +RKN KRS
Sbjct: 65  QEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN-KRS 124

Query: 77  SPATAAAIVKTPPSS 92
           S ++++ I++T PSS
Sbjct: 125 SSSSSSNILQTIPSS 138

The following BLAST results are available for this feature:

BLAST of Sed0000992 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523362.1	2.6e-85	76.96	dof zinc finger protein DOF1.7-like [Cucurbita pepo subsp. pepo]	[more]
KAG6606726.1	3.4e-85	78.44	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7036441.1	5.8e-85	76.96	Dof zinc finger protein DOF1.7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022948818.1	1.3e-84	76.50	dof zinc finger protein DOF1.7-like [Cucurbita moschata]	[more]
XP_022997902.1	2.2e-84	77.06	dof zinc finger protein DOF1.7-like [Cucurbita maxima]	[more]

BLAST of Sed0000992 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AR6	2.4e-33	59.09	Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana OX=3702 GN=DOF3.1 PE=2 SV...	[more]
O82155	3.8e-31	59.20	Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana OX=3702 GN=DOF1.7 PE=2 SV...	[more]
Q39088	5.2e-28	38.89	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q84TE9	6.3e-26	64.04	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]
Q9SXG8	1.1e-25	41.14	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]

BLAST of Sed0000992 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAD4	6.2e-85	76.50	dof zinc finger protein DOF1.7-like OS=Cucurbita moschata OX=3662 GN=LOC11145237...	[more]
A0A6J1K6C2	1.1e-84	77.06	dof zinc finger protein DOF1.7-like OS=Cucurbita maxima OX=3661 GN=LOC111492715 ...	[more]
A0A5A7UYP4	1.2e-80	76.74	Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BHT0	1.2e-80	76.74	dof zinc finger protein DOF1.7-like OS=Cucumis melo OX=3656 GN=LOC103490008 PE=4...	[more]
A0A0A0LDG2	7.9e-80	76.28	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G849890 PE...	[more]

BLAST of Sed0000992 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21270.1	1.7e-34	59.09	DOF zinc finger protein 2	[more]
AT1G51700.1	2.7e-32	59.20	DOF zinc finger protein 1	[more]
AT3G50410.1	3.7e-29	38.89	OBF binding protein 1	[more]
AT5G60200.1	4.5e-27	64.04	TARGET OF MONOPTEROS 6	[more]
AT2G46590.1	1.0e-26	70.67	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 18..74 e-value: 2.2E-33 score: 114.2
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 22..58
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 20..74 score: 29.571478
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..100
None	No IPR available	PANTHER	PTHR31992:SF153	DOF ZINC FINGER PROTEIN DOF3.1-LIKE	coord: 2..208
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 2..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000992.1	Sed0000992.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding