Sed0000989 (gene) Chayote v1

Overview
NameSed0000989
Typegene
OrganismSechium edule (Chayote v1)
Descriptionapoptotic chromatin condensation inducer in the nucleus-like
LocationLG13: 7408229 .. 7409608 (-)
RNA-Seq ExpressionSed0000989
SyntenySed0000989
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGATGAAGGGTGTATTTGGGGACATTTGAGACAAAACTTGAGGGGGAAGAAACGAAAATCGAAAAAACGAAAAACCGTTTGGGGTCTGCTCCAATCCTCCCTCCCTCCGATAGGGTTTGACGTCGAAGAAACGAAGAACCCTAAGAAGTCTGGTCTCATTTCTTCATCAAGATTCCACTGCTAAATTTGTGAGAAACGCAACACATTGCCTTGTAATCCTTTTCAATTCTCTGTTTCTGCTATCATCTTCTTTTGATTTCAGGTTACTCTGTGTTTTGCTGTTGTTTCTGGTTTTTTCTTCAATGCTTACTCTGCATTTCCCTTTTAATCTTGTAATTAGGCTCACAATTTCCCTCCTGAAGCTATTACACTTCCCTCAGTCATTTTCAGTATCGTTTCTCTGATTTTCAGTATTGTATCTTCAATCGTTGTAACTGATGTTTGGTTTCTTAAATCTAGAAATTGCGTTTCAGTCGTTTTCAGTAGTTGATCTTCGATCGTTGGATAGTTCTCCCCGATTCTTACGACTCAGGATAAACTCTCTCTTTCTCCCTCTGCTGACCTTGCTTCTTGTTCTTTTCTTTTTTCCTTTTGCCATTGTTTCAGGTTTGAATTGTGTTCACATGTCTTCCCATTCAAAATATCCGATGCTTGATAAGCGGCGGATTGATCAGTGGAAGGCTGCTGAGTTGAAAGCGGAGCTTAAGAGGCGCAAATTGTCCTCCAGGGGCCTGAAGGAAGATTTGATTCGACGTCTCGATGAAGCCCTTCGAAATGAAAGGGAGAATGCCCACGACCAAACCAATGGCCTTGATCTTGATGGCGACCCTCCAGTTTCAGAGGGTGGTGATAATAACCAAGAACATGCATCTATTGGTTCTGAGCCAACAAAAGAAACAAATATTGCTGCTGTGGACGAAGGGATACTTCAAGATGGGGTTCGTGTCAAAGAGTCTCCTAAGGTGGAAGAGGTCATCAATGTCACTACTCTGGAAACTATAATTACTGTGACCGAAACTGTGGTATCTGAAGCTGCTTTAACTGTGGAAGATTTGCATAACATAGAAAACAAGGATAATGAGGATTCAAAGATCAATTCGGAGGCTTTGGAATCGAAGCCCCAGCTGGATAGTGAAGATATAAAGGCTCAGCTAGAAAGTGAGGATACAAAGCCCCAGCTGGATGGTGTGAATATGGAGGCCTTTGTGAAAGTAGATGTTGAGGAGAAACATGATGTCAAGGAGATGATTGTTGGTCTTCATAAAAAACATGATGGTGCAGATGTGGGCTTATCTGAAAAGCTCACTTTAGATAGAAGCTCTGGGGATGATTCAATAGAAGATGATATGGAGAAGGAGAACAAGGCTGATTGA

mRNA sequence

ATGGAAATGATGAAGGGTGTTACTCTGTGTTTTGCTGTTGTTTCTGGTTTGAATTGTGTTCACATGTCTTCCCATTCAAAATATCCGATGCTTGATAAGCGGCGGATTGATCAGTGGAAGGCTGCTGAGTTGAAAGCGGAGCTTAAGAGGCGCAAATTGTCCTCCAGGGGCCTGAAGGAAGATTTGATTCGACGTCTCGATGAAGCCCTTCGAAATGAAAGGGAGAATGCCCACGACCAAACCAATGGCCTTGATCTTGATGGCGACCCTCCAGTTTCAGAGGGTGGTGATAATAACCAAGAACATGCATCTATTGGTTCTGAGCCAACAAAAGAAACAAATATTGCTGCTGTGGACGAAGGGATACTTCAAGATGGGGTTCGTGTCAAAGAGTCTCCTAAGGTGGAAGAGGTCATCAATGTCACTACTCTGGAAACTATAATTACTGTGACCGAAACTGTGGTATCTGAAGCTGCTTTAACTGTGGAAGATTTGCATAACATAGAAAACAAGGATAATGAGGATTCAAAGATCAATTCGGAGGCTTTGGAATCGAAGCCCCAGCTGGATAGTGAAGATATAAAGGCTCAGCTAGAAAGTGAGGATACAAAGCCCCAGCTGGATGGTGTGAATATGGAGGCCTTTGTGAAAGTAGATGTTGAGGAGAAACATGATGTCAAGGAGATGATTGTTGGTCTTCATAAAAAACATGATGGTGCAGATGTGGGCTTATCTGAAAAGCTCACTTTAGATAGAAGCTCTGGGGATGATTCAATAGAAGATGATATGGAGAAGGAGAACAAGGCTGATTGA

Coding sequence (CDS)

ATGGAAATGATGAAGGGTGTTACTCTGTGTTTTGCTGTTGTTTCTGGTTTGAATTGTGTTCACATGTCTTCCCATTCAAAATATCCGATGCTTGATAAGCGGCGGATTGATCAGTGGAAGGCTGCTGAGTTGAAAGCGGAGCTTAAGAGGCGCAAATTGTCCTCCAGGGGCCTGAAGGAAGATTTGATTCGACGTCTCGATGAAGCCCTTCGAAATGAAAGGGAGAATGCCCACGACCAAACCAATGGCCTTGATCTTGATGGCGACCCTCCAGTTTCAGAGGGTGGTGATAATAACCAAGAACATGCATCTATTGGTTCTGAGCCAACAAAAGAAACAAATATTGCTGCTGTGGACGAAGGGATACTTCAAGATGGGGTTCGTGTCAAAGAGTCTCCTAAGGTGGAAGAGGTCATCAATGTCACTACTCTGGAAACTATAATTACTGTGACCGAAACTGTGGTATCTGAAGCTGCTTTAACTGTGGAAGATTTGCATAACATAGAAAACAAGGATAATGAGGATTCAAAGATCAATTCGGAGGCTTTGGAATCGAAGCCCCAGCTGGATAGTGAAGATATAAAGGCTCAGCTAGAAAGTGAGGATACAAAGCCCCAGCTGGATGGTGTGAATATGGAGGCCTTTGTGAAAGTAGATGTTGAGGAGAAACATGATGTCAAGGAGATGATTGTTGGTCTTCATAAAAAACATGATGGTGCAGATGTGGGCTTATCTGAAAAGCTCACTTTAGATAGAAGCTCTGGGGATGATTCAATAGAAGATGATATGGAGAAGGAGAACAAGGCTGATTGA

Protein sequence

MEMMKGVTLCFAVVSGLNCVHMSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQTNGLDLDGDPPVSEGGDNNQEHASIGSEPTKETNIAAVDEGILQDGVRVKESPKVEEVINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSKINSEALESKPQLDSEDIKAQLESEDTKPQLDGVNMEAFVKVDVEEKHDVKEMIVGLHKKHDGADVGLSEKLTLDRSSGDDSIEDDMEKENKAD
Homology
BLAST of Sed0000989 vs. NCBI nr
Match: XP_023532042.1 (histone acetyltransferase KAT6A-like [Cucurbita pepo subsp. pepo] >XP_023532043.1 histone acetyltransferase KAT6A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 6.9e-54
Identity = 172/397 (43.32%), Postives = 196/397 (49.37%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+L+ R IDQW+  ELK ELKRRKL  RGLKEDLI+RLDE+LR ERENA ++T
Sbjct: 1   MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKETN---------------------IAAVDE 141
           NG  +D  PPV++  DNNQEHASI SE TKETN                      AAVDE
Sbjct: 61  NG--VDDAPPVTD-TDNNQEHASIVSETTKETNEDATVIEKVDGDEVQVGKNGSTAAVDE 120

Query: 142 GILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSKI 201
           GILQDGV +  SP+VEE   ++VTTLET +TV ETV +E AL+VE L N+E KDNEDSK 
Sbjct: 121 GILQDGVSLNGSPRVEEGSAVHVTTLETNVTVAETVATEGALSVEGLQNMETKDNEDSKP 180

Query: 202 NSEALESKPQLDSEDIKAQLESEDTKPQLDGVNMEA------------------------ 261
            SE  ESK QLDS+D K Q+E EDT+PQL  VNMEA                        
Sbjct: 181 QSEVEESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNENLKSQHANLGHDSSDPDNQ 240

Query: 262 ------------------------------------------------------------ 265
                                                                       
Sbjct: 241 VSEVSPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPD 300

BLAST of Sed0000989 vs. NCBI nr
Match: XP_022979241.1 (apoptotic chromatin condensation inducer in the nucleus-like [Cucurbita maxima] >XP_022979250.1 apoptotic chromatin condensation inducer in the nucleus-like [Cucurbita maxima])

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-53
Identity = 171/397 (43.07%), Postives = 196/397 (49.37%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+L+ R IDQW+  ELK ELKRRKL  RGLKEDLI+RLDE+LR ERENA ++T
Sbjct: 1   MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKET---------------------NIAAVDE 141
           NG  +D  PPV++  DNNQEHASI SE TKET                     + AAVDE
Sbjct: 61  NG--VDDAPPVTD-SDNNQEHASIVSETTKETSEDATMIEKVDGDEVQVEKNGSTAAVDE 120

Query: 142 GILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSKI 201
           GILQDGV +  SP+VEE   ++VTTLET +TV ETV +E AL+VE L N+E KDNEDSK 
Sbjct: 121 GILQDGVSLNGSPRVEEGSAVHVTTLETNVTVAETVATEGALSVEGLQNMETKDNEDSKP 180

Query: 202 NSEALESKPQLDSEDIKAQLESEDTKPQLDGVNMEA------------------------ 261
            SE  ESK QLDS+D K Q+E EDT+PQL  VNMEA                        
Sbjct: 181 QSEVEESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNKNLKSQDANLGHDSSDPDNQ 240

Query: 262 ------------------------------------------------------------ 265
                                                                       
Sbjct: 241 VSEVSPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPD 300

BLAST of Sed0000989 vs. NCBI nr
Match: KAG7031260.1 (Apoptotic chromatin condensation inducer in the nucleus, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.5 bits (550), Expect = 2.9e-52
Identity = 170/397 (42.82%), Postives = 194/397 (48.87%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+L+ R IDQW+  ELK ELKRRKL  RGLKEDLI+RLDE+LR ERENA ++T
Sbjct: 1   MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKETN---------------------IAAVDE 141
           NG  +D  PPV++  DNNQEHAS  SE TKETN                      AAVDE
Sbjct: 61  NG--VDDAPPVTD-TDNNQEHASTVSETTKETNEDATVIEKVDGDEVQVEKNGSTAAVDE 120

Query: 142 GILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSKI 201
            IL+DGV +  SP+VEE   ++VTTLET ITV ETV +E AL+VE L N+E KDNEDSK 
Sbjct: 121 AILRDGVSLNGSPRVEEGSAVHVTTLETNITVAETVATEGALSVEGLQNMETKDNEDSKP 180

Query: 202 NSEALESKPQLDSEDIKAQLESEDTKPQLDGVNMEA------------------------ 261
            SE  ESK QLDS+D K Q+E EDT+PQL  VNMEA                        
Sbjct: 181 QSEVEESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNENLKSQHANLGHDSSDPDNQ 240

Query: 262 ------------------------------------------------------------ 265
                                                                       
Sbjct: 241 VSEVSPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPD 300

BLAST of Sed0000989 vs. NCBI nr
Match: KAG6600625.1 (Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216.1 bits (549), Expect = 3.8e-52
Identity = 170/397 (42.82%), Postives = 194/397 (48.87%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+L+ R IDQW+  ELK ELKRRKL  RGLKEDLI+RLDE+LR ERENA ++T
Sbjct: 1   MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKETN---------------------IAAVDE 141
           NG  +D  PPV++  DNNQEHAS  SE TKETN                      AAVDE
Sbjct: 61  NG--VDDAPPVTD-TDNNQEHASTVSETTKETNEDATVIEKVDGDEVQVEKNGSTAAVDE 120

Query: 142 GILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSKI 201
            IL+DGV +  SP+VEE   ++VTTLET ITV ETV +E AL+VE L N+E KDNEDSK 
Sbjct: 121 AILRDGVSLNGSPRVEEGSAVHVTTLETNITVAETVATEGALSVEGLQNMETKDNEDSKP 180

Query: 202 NSEALESKPQLDSEDIKAQLESEDTKPQLDGVNMEA------------------------ 261
            SE  ESK QLDS+D K Q+E EDT+PQL  VNMEA                        
Sbjct: 181 QSEVEESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNENLKSQHANLGHDSSDPDNQ 240

Query: 262 ------------------------------------------------------------ 265
                                                                       
Sbjct: 241 VSEVSPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPD 300

BLAST of Sed0000989 vs. NCBI nr
Match: XP_022942162.1 (apoptotic chromatin condensation inducer in the nucleus-like [Cucurbita moschata] >XP_022942163.1 apoptotic chromatin condensation inducer in the nucleus-like [Cucurbita moschata])

HSP 1 Score: 215.3 bits (547), Expect = 6.4e-52
Identity = 169/397 (42.57%), Postives = 194/397 (48.87%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+L+ R IDQW+  ELK ELKRRKL  RGLKEDLI+RLDE+LR ERENA ++T
Sbjct: 1   MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKETN---------------------IAAVDE 141
           NG  +D  PPV++  DNNQEHASI SE TKETN                      AAVDE
Sbjct: 61  NG--VDDAPPVTD-TDNNQEHASIVSETTKETNEDATVIEKVDGDEVQVEKNDSTAAVDE 120

Query: 142 GILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSKI 201
            IL+DGV +  SP+VEE   ++VTTLET +TV ETV +E AL+VE L N+E KDNEDSK 
Sbjct: 121 AILRDGVSLNGSPRVEEGSAVHVTTLETNVTVAETVATEGALSVEGLQNMETKDNEDSKP 180

Query: 202 NSEALESKPQLDSEDIKAQLESEDTKPQLDGVNMEA------------------------ 261
            SE  ESK QLDS+D K Q+E EDT+PQL  VNMEA                        
Sbjct: 181 QSEVEESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNENLKSQHANLGHDSSDPDNQ 240

Query: 262 ------------------------------------------------------------ 265
                                                                       
Sbjct: 241 VSEVSPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPD 300

BLAST of Sed0000989 vs. ExPASy Swiss-Prot
Match: Q8VEK3 (Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-05
Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 0

Query: 36  IDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNER--ENAHDQTNG-LDLDGDPPV 95
           + + K +ELK ELK+R+LS +GLK DL+ RL  AL NE     A +  NG LDL GD   
Sbjct: 8   VKKLKVSELKEELKKRRLSDKGLKADLMDRLQAALDNEAGGRPAMEPGNGSLDLGGDAAG 67

Query: 96  SEGGDNNQEHASIGSEPTKETNIAAVD 120
             G    QE A+   +  +E  IAA+D
Sbjct: 68  RSGAGLEQEAAAGAEDDEEEEGIAALD 94

BLAST of Sed0000989 vs. ExPASy Swiss-Prot
Match: Q6IMY8 (Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-05
Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 0

Query: 36  IDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNER--ENAHDQTNG-LDLDGDPPV 95
           + + K +ELK ELK+R+LS +GLK DL+ RL  AL NE     A +  NG LDL GD   
Sbjct: 8   VKKLKVSELKEELKKRRLSDKGLKADLMDRLQAALDNEAGGRPAMEPGNGSLDLGGDAAG 67

Query: 96  SEGGDNNQEHASIGSEPTKETNIAAVD 120
             G    QE A+   +  +E  IAA+D
Sbjct: 68  RSGAGLEQEAAAGAEDDEEEEGIAALD 94

BLAST of Sed0000989 vs. ExPASy TrEMBL
Match: A0A6J1ISQ5 (apoptotic chromatin condensation inducer in the nucleus-like OS=Cucurbita maxima OX=3661 GN=LOC111479026 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 7.4e-54
Identity = 171/397 (43.07%), Postives = 196/397 (49.37%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+L+ R IDQW+  ELK ELKRRKL  RGLKEDLI+RLDE+LR ERENA ++T
Sbjct: 1   MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKET---------------------NIAAVDE 141
           NG  +D  PPV++  DNNQEHASI SE TKET                     + AAVDE
Sbjct: 61  NG--VDDAPPVTD-SDNNQEHASIVSETTKETSEDATMIEKVDGDEVQVEKNGSTAAVDE 120

Query: 142 GILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSKI 201
           GILQDGV +  SP+VEE   ++VTTLET +TV ETV +E AL+VE L N+E KDNEDSK 
Sbjct: 121 GILQDGVSLNGSPRVEEGSAVHVTTLETNVTVAETVATEGALSVEGLQNMETKDNEDSKP 180

Query: 202 NSEALESKPQLDSEDIKAQLESEDTKPQLDGVNMEA------------------------ 261
            SE  ESK QLDS+D K Q+E EDT+PQL  VNMEA                        
Sbjct: 181 QSEVEESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNKNLKSQDANLGHDSSDPDNQ 240

Query: 262 ------------------------------------------------------------ 265
                                                                       
Sbjct: 241 VSEVSPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPD 300

BLAST of Sed0000989 vs. ExPASy TrEMBL
Match: A0A6J1FU38 (apoptotic chromatin condensation inducer in the nucleus-like OS=Cucurbita moschata OX=3662 GN=LOC111447305 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.1e-52
Identity = 169/397 (42.57%), Postives = 194/397 (48.87%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+L+ R IDQW+  ELK ELKRRKL  RGLKEDLI+RLDE+LR ERENA ++T
Sbjct: 1   MSSKSKYPILENRPIDQWRVTELKDELKRRKLPIRGLKEDLIKRLDESLRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKETN---------------------IAAVDE 141
           NG  +D  PPV++  DNNQEHASI SE TKETN                      AAVDE
Sbjct: 61  NG--VDDAPPVTD-TDNNQEHASIVSETTKETNEDATVIEKVDGDEVQVEKNDSTAAVDE 120

Query: 142 GILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSKI 201
            IL+DGV +  SP+VEE   ++VTTLET +TV ETV +E AL+VE L N+E KDNEDSK 
Sbjct: 121 AILRDGVSLNGSPRVEEGSAVHVTTLETNVTVAETVATEGALSVEGLQNMETKDNEDSKP 180

Query: 202 NSEALESKPQLDSEDIKAQLESEDTKPQLDGVNMEA------------------------ 261
            SE  ESK QLDS+D K Q+E EDT+PQL  VNMEA                        
Sbjct: 181 QSEVEESKSQLDSKDSKLQMEIEDTQPQLVDVNMEAQVKNENLKSQHANLGHDSSDPDNQ 240

Query: 262 ------------------------------------------------------------ 265
                                                                       
Sbjct: 241 VSEVSPVIGSQVRTDSISTDSVTINEMIELKENISADHVKLELDVKQEMVEPSSSIVVPD 300

BLAST of Sed0000989 vs. ExPASy TrEMBL
Match: A0A6J1C3S7 (apoptotic chromatin condensation inducer in the nucleus isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008217 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47
Identity = 172/431 (39.91%), Postives = 199/431 (46.17%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+LD R IDQWK  ELK ELKRRKL+ +GLKEDLI+RLDEALR ERENA ++T
Sbjct: 1   MSSKSKYPILDNRPIDQWKVTELKEELKRRKLTIKGLKEDLIKRLDEALRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKETN----------------------IAAVD 141
           NG++  GDPP+++   N+QEH SI S+ T+ETN                       AAV 
Sbjct: 61  NGVE-GGDPPLTDTA-NDQEHVSIVSQTTQETNEDANKVEKKVDDVEVQVDKNDGTAAVG 120

Query: 142 EGILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSK 201
           +G LQDGV +  SP+VEE   I+VTTLET +TVTETVVSE AL+ E L NIE+KDNEDSK
Sbjct: 121 KGKLQDGVSLNGSPRVEEGSAIHVTTLETKVTVTETVVSEVALSEEALPNIESKDNEDSK 180

Query: 202 INSEALESK---------------------------PQLDSEDIKAQLESEDTKPQLDGV 261
           + SE  +SK                           PQL+SED K QLESEDTKPQLD V
Sbjct: 181 LQSEIGDSKFQLEIEDSKPQLETEDTKPQLETEDTRPQLESEDSKPQLESEDTKPQLDDV 240

Query: 262 NME--------------------------------------------------------- 271
           N E                                                         
Sbjct: 241 NCEPQVENENLKSQHADPMHYSSAPDDQVSEVSPVLGSQVRTDSISTDSVTINEMIELKE 300

BLAST of Sed0000989 vs. ExPASy TrEMBL
Match: A0A6J1C5S6 (apoptotic chromatin condensation inducer in the nucleus isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008217 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47
Identity = 172/431 (39.91%), Postives = 199/431 (46.17%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKYP+LD R IDQWK  ELK ELKRRKL+ +GLKEDLI+RLDEALR ERENA ++T
Sbjct: 1   MSSKSKYPILDNRPIDQWKVTELKEELKRRKLTIKGLKEDLIKRLDEALRIERENA-EET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKETN----------------------IAAVD 141
           NG++  GDPP+++   N+QEH SI S+ T+ETN                       AAV 
Sbjct: 61  NGVE-GGDPPLTDTA-NDQEHVSIVSQTTQETNEDANKVEKKVDDVEVQVDKNDGTAAVG 120

Query: 142 EGILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAALTVEDLHNIENKDNEDSK 201
           +G LQDGV +  SP+VEE   I+VTTLET +TVTETVVSE AL+ E L NIE+KDNEDSK
Sbjct: 121 KGKLQDGVSLNGSPRVEEGSAIHVTTLETKVTVTETVVSEVALSEEALPNIESKDNEDSK 180

Query: 202 INSEALESK---------------------------PQLDSEDIKAQLESEDTKPQLDGV 261
           + SE  +SK                           PQL+SED K QLESEDTKPQLD V
Sbjct: 181 LQSEIGDSKFQLEIEDSKPQLETEDTKPQLETEDTRPQLESEDSKPQLESEDTKPQLDDV 240

Query: 262 NME--------------------------------------------------------- 271
           N E                                                         
Sbjct: 241 NCEPQVENENLKSQHADPMHYSSAPDDQVSEVSPVLGSQVRTDSISTDSVTINEMIELKE 300

BLAST of Sed0000989 vs. ExPASy TrEMBL
Match: A0A5A7TN36 (Apoptotic chromatin condensation inducer in the nucleus OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00160 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-44
Identity = 162/415 (39.04%), Postives = 194/415 (46.75%), Query Frame = 0

Query: 22  MSSHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQT 81
           MSS SKY +LD R IDQWK  ELK ELKRRKL+ +GLKEDL++RLDEALR ERE   ++T
Sbjct: 1   MSSKSKYSILDNRPIDQWKVTELKEELKRRKLTIKGLKEDLVKRLDEALRMEREENAEET 60

Query: 82  NGLDLDGDPPVSEGGDNNQEHASIGSEPTKETN---------------------IAAVDE 141
           NG  +DGDPPV+   DNNQEHAS+ S   KETN                      AAV E
Sbjct: 61  NG--VDGDPPVT-NSDNNQEHASVVSGTAKETNEDANITEHVDDVGVQVEKDDSNAAVRE 120

Query: 142 GILQDGVRVKESPKVEE--VINVTTLETIITVTETVVSEAAL--TVEDLHNIENKDNEDS 201
           G +QDG  +  SP+VEE   I+V+T+ET ITVTETVVSE A+   VE L N E+KDNED 
Sbjct: 121 GEIQDGAGLNGSPRVEEGSPIHVSTVETKITVTETVVSEVAIGVGVEGLKNTESKDNED- 180

Query: 202 KINSEALESKPQLDSEDIKAQL------------------ESEDTKPQLDGVNM------ 261
           ++  ++ +SKPQLDSE+ K Q+                  +SED+KPQLD VNM      
Sbjct: 181 RLELDSEDSKPQLDSEESKPQMVSEESKPQLVSEGSKPQRDSEDSKPQLDDVNMELQVEN 240

Query: 262 ------------------------------------------------------------ 271
                                                                       
Sbjct: 241 ENLKSQQADLVHDSSAPDDQVSEVSPVLGSQVRTDSISTDSVTINEMIELKENISADHVK 300

BLAST of Sed0000989 vs. TAIR 10
Match: AT4G39680.1 (SAP domain-containing protein )

HSP 1 Score: 68.6 bits (166), Expect = 9.0e-12
Identity = 95/330 (28.79%), Postives = 136/330 (41.21%), Query Frame = 0

Query: 24  SHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQTNG 83
           S S +P+LD R ID+WK  ELK ELKRR+L++RGLKE+L+RRLDEALR E+E +    + 
Sbjct: 2   SSSPFPVLDNRPIDKWKVTELKEELKRRRLTTRGLKEELVRRLDEALRAEQEESERINSA 61

Query: 84  LDLDGDPPVSEG-------GDNNQ--------------------------------EHAS 143
                +    E        GD NQ                                  AS
Sbjct: 62  TVAAAEKANQEPQMFPVTVGDRNQTTPVTPVEAAFSTETTPVTAEKTPEPTQTKITTEAS 121

Query: 144 IGSEPTKETNIAAVDEGILQDGVRVKESPKVEEVINVTTLETIITVTETVVSEAALTVED 203
            G E T     +  +   +       E  KV++V ++  L++ +   +  V + A +   
Sbjct: 122 AGVETTPAPVFSEPEVNAVPFASDEDEKEKVDDVRDIAGLDSSVVARDAAVVQVASSEHK 181

Query: 204 LHNIE---NKDNEDSKIN-SEALESKPQL----------------------DSEDIKAQL 263
             N E     D  DSK   SEA+  K  +                      DS     ++
Sbjct: 182 SENNEPFSGLDGGDSKAQPSEAVLEKSAMYNQVSEVIPVTGFEVKSDCISTDSVSNNEKI 241

Query: 264 ESEDTKPQLDGVNMEAFVK--------------VDVEEKHDVKEMIVG----------LH 265
           E +D K   D V +E  V               +DVEE  + K  + G          + 
Sbjct: 242 ELKDNK-IADNVKLEQNVNKFQEPSTVVGESHPMDVEEPLEQKTSVGGGDDSNAANADMI 301

BLAST of Sed0000989 vs. TAIR 10
Match: AT4G39680.2 (SAP domain-containing protein )

HSP 1 Score: 68.6 bits (166), Expect = 9.0e-12
Identity = 95/330 (28.79%), Postives = 136/330 (41.21%), Query Frame = 0

Query: 24  SHSKYPMLDKRRIDQWKAAELKAELKRRKLSSRGLKEDLIRRLDEALRNERENAHDQTNG 83
           S S +P+LD R ID+WK  ELK ELKRR+L++RGLKE+L+RRLDEALR E+E +    + 
Sbjct: 2   SSSPFPVLDNRPIDKWKVTELKEELKRRRLTTRGLKEELVRRLDEALRAEQEESERINSA 61

Query: 84  LDLDGDPPVSEG-------GDNNQ--------------------------------EHAS 143
                +    E        GD NQ                                  AS
Sbjct: 62  TVAAAEKANQEPQMFPVTVGDRNQTTPVTPVEAAFSTETTPVTAEKTPEPTQTKITTEAS 121

Query: 144 IGSEPTKETNIAAVDEGILQDGVRVKESPKVEEVINVTTLETIITVTETVVSEAALTVED 203
            G E T     +  +   +       E  KV++V ++  L++ +   +  V + A +   
Sbjct: 122 AGVETTPAPVFSEPEVNAVPFASDEDEKEKVDDVRDIAGLDSSVVARDAAVVQVASSEHK 181

Query: 204 LHNIE---NKDNEDSKIN-SEALESKPQL----------------------DSEDIKAQL 263
             N E     D  DSK   SEA+  K  +                      DS     ++
Sbjct: 182 SENNEPFSGLDGGDSKAQPSEAVLEKSAMYNQVSEVIPVTGFEVKSDCISTDSVSNNEKI 241

Query: 264 ESEDTKPQLDGVNMEAFVK--------------VDVEEKHDVKEMIVG----------LH 265
           E +D K   D V +E  V               +DVEE  + K  + G          + 
Sbjct: 242 ELKDNK-IADNVKLEQNVNKFQEPSTVVGESHPMDVEEPLEQKTSVGGGDDSNAANADMI 301

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023532042.16.9e-5443.32histone acetyltransferase KAT6A-like [Cucurbita pepo subsp. pepo] >XP_023532043.... [more]
XP_022979241.11.5e-5343.07apoptotic chromatin condensation inducer in the nucleus-like [Cucurbita maxima] ... [more]
KAG7031260.12.9e-5242.82Apoptotic chromatin condensation inducer in the nucleus, partial [Cucurbita argy... [more]
KAG6600625.13.8e-5242.82Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita ... [more]
XP_022942162.16.4e-5242.57apoptotic chromatin condensation inducer in the nucleus-like [Cucurbita moschata... [more]
Match NameE-valueIdentityDescription
Q8VEK34.7e-0543.68Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=... [more]
Q6IMY84.7e-0543.68Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnp... [more]
Match NameE-valueIdentityDescription
A0A6J1ISQ57.4e-5443.07apoptotic chromatin condensation inducer in the nucleus-like OS=Cucurbita maxima... [more]
A0A6J1FU383.1e-5242.57apoptotic chromatin condensation inducer in the nucleus-like OS=Cucurbita moscha... [more]
A0A6J1C3S71.4e-4739.91apoptotic chromatin condensation inducer in the nucleus isoform X1 OS=Momordica ... [more]
A0A6J1C5S61.4e-4739.91apoptotic chromatin condensation inducer in the nucleus isoform X2 OS=Momordica ... [more]
A0A5A7TN361.4e-4439.04Apoptotic chromatin condensation inducer in the nucleus OS=Cucumis melo var. mak... [more]
Match NameE-valueIdentityDescription
AT4G39680.19.0e-1228.79SAP domain-containing protein [more]
AT4G39680.29.0e-1228.79SAP domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 36..70
e-value: 4.8E-8
score: 42.7
IPR003034SAP domainPFAMPF02037SAPcoord: 38..70
e-value: 5.2E-10
score: 38.9
IPR003034SAP domainPROSITEPS50800SAPcoord: 36..70
score: 9.00729
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 18..82
e-value: 2.7E-11
score: 44.9
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 35..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..114
NoneNo IPR availablePANTHERPTHR47031SAP DNA-BINDING DOMAIN-CONTAINING PROTEINcoord: 217..269
coord: 25..209
NoneNo IPR availablePANTHERPTHR47031:SF3SAP DNA-BINDING DOMAIN-CONTAINING PROTEINcoord: 25..209
NoneNo IPR availablePANTHERPTHR47031:SF3SAP DNA-BINDING DOMAIN-CONTAINING PROTEINcoord: 217..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0000989.1Sed0000989.1mRNA