Sed0000977 (gene) Chayote v1

Overview


Name	Sed0000977
Type	gene
Organism	Sechium edule (Chayote v1)
Description	MuDRA-like transposase
Location	LG11: 9616806 .. 9617750 (-)
RNA-Seq Expression	Sed0000977
Synteny	Sed0000977

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTATGACAAACAACTCATGTGAGAGTTATAATAATGTCATGCTTAAAGCGCGTGAGCTACCGGTGCATGCCATGTTCGAGGCAGTTAGGATGTCCATGCAATCTTGGTTTAGTGCTAGAAGGTTGGAAGCTTCTTATCAGAAAACAAATTTCTCAAAACAATGTGAATTTCAATTAAGAGGGCAGGTTGAAACTGGTCATTTCATGCAGGTATTTCGATTCTTTTCTGTTTAGGTTATATTAAGTAGTATTACTACTGTATTTATTATTACTTACTCTATTAATGTATATATTAATACTGTCTTCAAACAGGTGTTATCCATTGATACTGATCAATTTCAAGTTGTTTATGGAACTCAGCAAAATATAGTCAATATGAGAGAAAAGAAGTGCACATGCCAGCAATATGATCAACTAGGCATACCATGTCCACATGCCTCTGCTGTTATACTCCATAAAGACCTTCGAGCCAAAGATTATGTCTCTGATTATTATTCAAATGATAAAATACGAAAGACTTATGCTGGCCTAATATTCCCTGTTGGTTTTTCTGGCTATTGGGATGTACCTCAAGACATCAAAGATATCAAACTTTTGCCCCCTTCAACAAGACGCCCAATTGGTAGACCGAAGATGCAACGCATGAAAACAAATGTTGAAATGAAGCTAAAAGTTAAATGTGGACGGTGCAAAAAGCTTGGTCACAATAGAAAGACGTGCAGAAACCCTTTTTCTGAGTAGCATTTTTTTTTTCTTACTATATCTCATATTTTTAGGTGTGTATTGCATTTGTTTACATTCTTTTCAAACATGGTATGAATAGGTAATACCGTGTTTAGTATTGTTCTCTACTATATTTTTCCAAAAAATAATGATACTGTGTGCAAGTATTACATTTGGTACTTGTTTGTATTTTTTCATTTGAGAACATGAAGAAATCTCA

mRNA sequence

ATTCTATGACAAACAACTCATGTGAGAGTTATAATAATGTCATGCTTAAAGCGCGTGAGCTACCGGTGCATGCCATGTTCGAGGCAGTTAGGATGTCCATGCAATCTTGGTTTAGTGCTAGAAGGTTGGAAGCTTCTTATCAGAAAACAAATTTCTCAAAACAATGTGAATTTCAATTAAGAGGGCAGGTTGAAACTGGTCATTTCATGCAGCAAAATATAGTCAATATGAGAGAAAAGAAGTGCACATGCCAGCAATATGATCAACTAGGCATACCATGTCCACATGCCTCTGCTGTTATACTCCATAAAGACCTTCGAGCCAAAGATTATGTCTCTGATTATTATTCAAATGATAAAATACGAAAGACTTATGCTGGCCTAATATTCCCTGTTGGTTTTTCTGGCTATTGGGATGTACCTCAAGACATCAAAGATATCAAACTTTTGCCCCCTTCAACAAGACGCCCAATTGGTAGACCGAAGATGCAACGCATGAAAACAAATGTTGAAATGAAGCTAAAAGTTAAATGTGGACGGTGCAAAAAGCTTGGTCACAATAGAAAGACGTGCAGAAACCCTTTTTCTGAGTAGCATTTTTTTTTTCTTACTATATCTCATATTTTTAGGTGTGTATTGCATTTGTTTACATTCTTTTCAAACATGGTATGAATAGGTAATACCGTGTTTAGTATTGTTCTCTACTATATTTTTCCAAAAAATAATGATACTGTGTGCAAGTATTACATTTGGTACTTGTTTGTATTTTTTCATTTGAGAACATGAAGAAATCTCA

Coding sequence (CDS)

ATGACAAACAACTCATGTGAGAGTTATAATAATGTCATGCTTAAAGCGCGTGAGCTACCGGTGCATGCCATGTTCGAGGCAGTTAGGATGTCCATGCAATCTTGGTTTAGTGCTAGAAGGTTGGAAGCTTCTTATCAGAAAACAAATTTCTCAAAACAATGTGAATTTCAATTAAGAGGGCAGGTTGAAACTGGTCATTTCATGCAGCAAAATATAGTCAATATGAGAGAAAAGAAGTGCACATGCCAGCAATATGATCAACTAGGCATACCATGTCCACATGCCTCTGCTGTTATACTCCATAAAGACCTTCGAGCCAAAGATTATGTCTCTGATTATTATTCAAATGATAAAATACGAAAGACTTATGCTGGCCTAATATTCCCTGTTGGTTTTTCTGGCTATTGGGATGTACCTCAAGACATCAAAGATATCAAACTTTTGCCCCCTTCAACAAGACGCCCAATTGGTAGACCGAAGATGCAACGCATGAAAACAAATGTTGAAATGAAGCTAAAAGTTAAATGTGGACGGTGCAAAAAGCTTGGTCACAATAGAAAGACGTGCAGAAACCCTTTTTCTGAGTAG

Protein sequence

MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRGQVETGHFMQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDLRAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRMKTNVEMKLKVKCGRCKKLGHNRKTCRNPFSE

Homology

[Close]

BLAST of Sed0000977 vs. NCBI nr
Match: XP_030505053.1 (uncharacterized protein LOC115720027 [Cannabis sativa])

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-34
Identity = 79/208 (37.98%), Postives = 119/208 (57.21%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT+N  ES N   L ARELP+  + EA+R  +Q W    R  A    T  +   E +++G
Sbjct: 519 MTSNVAESLNAANLAARELPITTLMEALRTLIQEWTCKNRKMAQGTFTKLTPVAEMKMKG 578

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
             +T   ++V + +   F+V    +  +VN+ +K CTC ++    +PC HA AV+    L
Sbjct: 579 NYKTALKLKVRASNEHIFEVYKVKRSWVVNLEQKTCTCNRFQIDEMPCAHALAVMKEMYL 638

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
             ++Y SDYYS     +TY   ++PVG    WD+PQ+IKDI++LPP  R   GRPK +R 
Sbjct: 639 DPQNYCSDYYSTKNWLETYEATVYPVGNQSSWDIPQEIKDIEILPPLERVKAGRPKKKRT 698

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRNP 209
           + + E K ++KC +C +  HNR+TC NP
Sbjct: 699 RPSWETKTQIKCTKCGRKEHNRRTCNNP 726

[Close]

BLAST of Sed0000977 vs. NCBI nr
Match: XP_030483642.1 (uncharacterized protein LOC115700217 [Cannabis sativa])

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-32
Identity = 76/207 (36.71%), Postives = 115/207 (55.56%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT+N  ES N  +   RELPV  + E +   +Q W+   +  A    T  +   E  L+ 
Sbjct: 80  MTSNIAESVNAALKSVRELPVATLLECLHSLVQRWYWENKNRALKTDTTLANIPEKALKK 139

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
           Q E G   +V + +   ++V   T   IVN+  K CTCQ++D   +PC HA AV+  ++ 
Sbjct: 140 QREMGLKYKVETANLLVYKVHDYTSSYIVNLENKTCTCQKFDYDEMPCSHAMAVLAKRNF 199

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
               Y S YY+ +    TY   I P+G +  W++P+D+K+I + PP  +RP GRPK  R 
Sbjct: 200 SCYKYCSYYYTKEAFMSTYEDSILPLGEATSWNIPEDVKNITVHPPKYKRPAGRPKKDRY 259

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRN 208
           K  ++ K KVKCG+C + GHNR++C+N
Sbjct: 260 KGAMDTKTKVKCGKCNQKGHNRRSCKN 286

[Close]

BLAST of Sed0000977 vs. NCBI nr
Match: XP_030497480.1 (uncharacterized protein LOC115713133 [Cannabis sativa])

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-32
Identity = 76/207 (36.71%), Postives = 115/207 (55.56%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT+N  ES N  +   RELPV  + E +   +Q W+   +  A    T  +   E  L+ 
Sbjct: 297 MTSNIAESVNAALKSVRELPVATLLECLHSLVQRWYWENKNRALKTDTTLANIPEKALKK 356

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
           Q E G   +V + +   ++V   T   IVN+  K CTCQ++D   +PC HA AV+  ++ 
Sbjct: 357 QREMGLKYKVETANLLVYKVHDYTSSYIVNLENKTCTCQKFDYDEMPCSHAMAVLAKRNF 416

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
               Y S YY+ +    TY   I P+G +  W++P+D+K+I + PP  +RP GRPK  R 
Sbjct: 417 SCYKYCSYYYTKEAFMSTYEDSILPLGEATSWNIPEDVKNITVHPPKYKRPAGRPKKDRY 476

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRN 208
           K  ++ K KVKCG+C + GHNR++C+N
Sbjct: 477 KGAMDTKTKVKCGKCNQKGHNRRSCKN 503

[Close]

BLAST of Sed0000977 vs. NCBI nr
Match: XP_017250997.1 (PREDICTED: uncharacterized protein LOC108221644 [Daucus carota subsp. sativus])

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-31
Identity = 77/211 (36.49%), Postives = 114/211 (54.03%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT+N  E  N+V++  RELP+  M E++R  +Q W    R EA+   T  + + E  L+ 
Sbjct: 560 MTSNIAECLNSVIISIRELPICTMIESLRALIQKWSWKNRNEANATSTKLTAKYEDLLKT 619

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
                  + V   +   F+V    ++ IV++  K C C ++    IPC HA A +    L
Sbjct: 620 NYHYSIDLTVHPTNEIFFEVHNKEKKYIVDLSTKTCNCNRFQMDHIPCSHAIAALQKSSL 679

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
              DY S YY  + +  TY  +++PVG    W VP+DIK + + PP  R  +GRPK +R 
Sbjct: 680 DPYDYCSPYYKKETMVATYKEIVYPVGHQDAWQVPEDIKSVVVYPPQGRIRVGRPKKRRC 739

Query: 181 KTNVEMKLK---VKCGRCKKLGHNRKTCRNP 209
           K   E   K   V+CG+CK++GHNR+TCRNP
Sbjct: 740 KATWERSAKTTQVQCGKCKQIGHNRRTCRNP 770

[Close]

BLAST of Sed0000977 vs. NCBI nr
Match: KAA0040900.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-31
Identity = 73/210 (34.76%), Postives = 117/210 (55.71%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT N  ES N+++ + R+LP+ +  E VR  +Q WF  RR E     +  +K  E  ++ 
Sbjct: 589 MTTNIAESMNSILKEPRDLPIASFLENVRALLQRWFWERREEGIKVTSTLTKWAELVIQK 648

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
           + E    M+V  ID  QF V    ++ +VN++ K+CTC+++    +PC HA A    +++
Sbjct: 649 KQEGALTMKVNPIDCYQFHVKDLDKEEVVNLQTKECTCKEFQAEQLPCSHAIAAARDRNI 708

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
                 ++YY+N+ +   YA  ++PVG    W   +D   + +LPP   + +GRPK +R+
Sbjct: 709 NVYSLCANYYTNECLLAAYAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRI 768

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRNPFS 211
            +  E     KCGRCK++GHNR TC NP S
Sbjct: 769 PSVGEAPKLHKCGRCKQIGHNRLTCTNPIS 798

[Close]

BLAST of Sed0000977 vs. ExPASy TrEMBL
Match: A0A803PZT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.0e-34
Identity = 79/208 (37.98%), Postives = 119/208 (57.21%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT+N  ES N   L ARELP+  + EA+R  +Q W    R  A    T  +   E +++G
Sbjct: 487 MTSNVAESLNAANLAARELPITTLMEALRTLIQEWTCKNRKMAQGTFTKLTPVAEMKMKG 546

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
             +T   ++V + +   F+V    +  +VN+ +K CTC ++    +PC HA AV+    L
Sbjct: 547 NYKTALKLKVRASNEHIFEVYKVKRSWVVNLEQKTCTCNRFQIDEMPCAHALAVMKEMYL 606

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
             ++Y SDYYS     +TY   ++PVG    WD+PQ+IKDI++LPP  R   GRPK +R 
Sbjct: 607 DPQNYCSDYYSTKNWLETYEATVYPVGNQSSWDIPQEIKDIEILPPLERVKAGRPKKKRT 666

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRNP 209
           + + E K ++KC +C +  HNR+TC NP
Sbjct: 667 RPSWETKTQIKCTKCGRKEHNRRTCNNP 694

[Close]

BLAST of Sed0000977 vs. ExPASy TrEMBL
Match: A0A5A7TC30 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00100 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31
Identity = 73/210 (34.76%), Postives = 117/210 (55.71%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT N  ES N+++ + R+LP+ +  E VR  +Q WF  RR E     +  +K  E  ++ 
Sbjct: 589 MTTNIAESMNSILKEPRDLPIASFLENVRALLQRWFWERREEGIKVTSTLTKWAELVIQK 648

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
           + E    M+V  ID  QF V    ++ +VN++ K+CTC+++    +PC HA A    +++
Sbjct: 649 KQEGALTMKVNPIDCYQFHVKDLDKEEVVNLQTKECTCKEFQAEQLPCSHAIAAARDRNI 708

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
                 ++YY+N+ +   YA  ++PVG    W   +D   + +LPP   + +GRPK +R+
Sbjct: 709 NVYSLCANYYTNECLLAAYAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRI 768

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRNPFS 211
            +  E     KCGRCK++GHNR TC NP S
Sbjct: 769 PSVGEAPKLHKCGRCKQIGHNRLTCTNPIS 798

[Close]

BLAST of Sed0000977 vs. ExPASy TrEMBL
Match: A0A5A7UML9 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00820 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.8e-31
Identity = 74/210 (35.24%), Postives = 117/210 (55.71%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT N  ES N+++ + R+LP+ +  E VR  +Q WF  RR E     +  +K  E  ++ 
Sbjct: 589 MTTNIAESMNSILKEPRDLPIASFLENVRALLQRWFWERREEGIKVTSTLTKWAELVIQK 648

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
           + E    M+V  ID  QF V    ++ +VN++ K+CTC+++    +PC HA A    +++
Sbjct: 649 KQEGPLTMKVNPIDCYQFHVKDLNKEEVVNLQTKECTCKEFQAEQLPCSHAIAAARDRNI 708

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
                 ++YY+N+ +   YA  I+PVG    W   +D   + +LPP   + +GRPK +R+
Sbjct: 709 NVYSLCANYYTNECLLAAYAEAIYPVGNQSDWKTSKDYVHMTVLPPKVVKRVGRPKKKRI 768

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRNPFS 211
            +  E     KCGRCK++GHNR TC NP S
Sbjct: 769 PSVGEAPKLHKCGRCKQIGHNRLTCTNPIS 798

[Close]

BLAST of Sed0000977 vs. ExPASy TrEMBL
Match: A0A5D3BSX9 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00750 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.4e-31
Identity = 73/210 (34.76%), Postives = 117/210 (55.71%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT N  ES N+++ + R+LP+ +  E VR  +Q WF  RR E     +  +K  E  ++ 
Sbjct: 589 MTTNIAESMNSILKEPRDLPIASFLENVRALLQRWFWERREEGIKVTSTLTKWAELVIQK 648

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
           + E    M+V  ID  QF V    ++ +VN++ K+CTC+++    +PC HA A    +++
Sbjct: 649 KQEGALTMKVNPIDCYQFHVKDLDKEEVVNLQTKECTCKEFQAEQLPCSHAIAAARVRNI 708

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
                 ++YY+N+ +   YA  ++PVG    W   +D   + +LPP   + +GRPK +R+
Sbjct: 709 NVYSLCANYYTNECLLAAYAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRI 768

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRNPFS 211
            +  E     KCGRCK++GHNR TC NP S
Sbjct: 769 PSVGEAPKLHKCGRCKQIGHNRLTCTNPIS 798

[Close]

BLAST of Sed0000977 vs. ExPASy TrEMBL
Match: A0A5D3DKA1 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001270 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.4e-31
Identity = 73/210 (34.76%), Postives = 117/210 (55.71%), Query Frame = 0


Query: 1   MTNNSCESYNNVMLKARELPVHAMFEAVRMSMQSWFSARRLEASYQKTNFSKQCEFQLRG 60
           MT N  ES N+++ + R+LP+ +  E VR  +Q WF  RR E     +  +K  E  ++ 
Sbjct: 589 MTTNIAESMNSILKEPRDLPIASFLENVRALLQRWFWERREEGIKVTSTLTKWAELVIQK 648

Query: 61  QVETGHFMQVLSIDTDQFQVVYGTQQNIVNMREKKCTCQQYDQLGIPCPHASAVILHKDL 120
           + E    M+V  ID  QF V    ++ +VN++ K+CTC+++    +PC HA A    +++
Sbjct: 649 KQEGALTMKVNPIDCYQFHVKDLDKEEVVNLQTKECTCKEFQAEQLPCSHAIAAARVRNI 708

Query: 121 RAKDYVSDYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPPSTRRPIGRPKMQRM 180
                 ++YY+N+ +   YA  ++PVG    W   +D   + +LPP   + +GRPK +R+
Sbjct: 709 NVYSLCANYYTNECLLAAYAEAVYPVGNQSDWKTSEDYVHMTVLPPKVVKRVGRPKKKRI 768

Query: 181 KTNVEMKLKVKCGRCKKLGHNRKTCRNPFS 211
            +  E     KCGRCK++GHNR TC NP S
Sbjct: 769 PSVGEAPKLHKCGRCKQIGHNRLTCTNPIS 798

[Close]

BLAST of Sed0000977 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 52.4 bits (124), Expect = 5.2e-07
Identity = 30/99 (30.30%), Postives = 46/99 (46.46%), Query Frame = 0


Query: 70  VLSIDTDQFQVVYGTQQN--IVNMREKKCTCQQYDQLGIPCPHASAVILHKDLRAKDYVS 129
           V  +D + FQV     +   IV + +  CTC  + +   PC HA AV          YV 
Sbjct: 624 VTPLDNNAFQVATALDKGECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVD 683

Query: 130 DYYSNDKIRKTYAGLIFPVGFSGYWDVPQDIKDIKLLPP 167
           D Y+ +++++TYA +   V     W  P+     +LLPP
Sbjct: 684 DCYTLERLKRTYATIFSHVPEMSAW--PEASGVPRLLPP 720

[Close]

BLAST of Sed0000977 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 49.3 bits (116), Expect = 4.4e-06
Identity = 26/84 (30.95%), Postives = 38/84 (45.24%), Query Frame = 0


Query: 88  IVNMREKKCTCQQYDQLGIPCPHASAVILHKDLRAKDYVSDYYSNDKIRKTYAGLIFPVG 147
           IV + +  CTC ++ +   PC HA AV     +    YV D Y+ ++  KTY+    PV 
Sbjct: 651 IVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKFSPVP 710

Query: 148 FSGYWDVPQDIKDIKLLPPSTRRP 172
               W  P+      L+PP    P
Sbjct: 711 ELSAW--PEAYGVPTLIPPVIEPP 732

The following BLAST results are available for this feature:

BLAST of Sed0000977 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030505053.1	2.1e-34	37.98	uncharacterized protein LOC115720027 [Cannabis sativa]	[more]
XP_030483642.1	4.4e-32	36.71	uncharacterized protein LOC115700217 [Cannabis sativa]	[more]
XP_030497480.1	4.4e-32	36.71	uncharacterized protein LOC115713133 [Cannabis sativa]	[more]
XP_017250997.1	2.9e-31	36.49	PREDICTED: uncharacterized protein LOC108221644 [Daucus carota subsp. sativus]	[more]
KAA0040900.1	2.9e-31	34.76	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]

BLAST of Sed0000977 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0000977 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803PZT2	1.0e-34	37.98	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A5A7TC30	1.4e-31	34.76	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A5A7UML9	1.8e-31	35.24	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4...	[more]
A0A5D3BSX9	2.4e-31	34.76	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A5D3DKA1	2.4e-31	34.76	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]

BLAST of Sed0000977 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64255.1	5.2e-07	30.30	MuDR family transposase	[more]
AT1G49920.1	4.4e-06	30.95	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 78..105 e-value: 1.6E-7 score: 41.0
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 75..102 e-value: 4.6E-6 score: 26.2
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 71..103 score: 9.779547
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 31..189
None	No IPR available	PANTHER	PTHR31973:SF153	FAMILY TRANSPOSASE, PUTATIVE ISOFORM 1-RELATED	coord: 31..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000977.2	Sed0000977.2	mRNA
Sed0000977.1	Sed0000977.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding