Sed0000909 (gene) Chayote v1

Overview


Name	Sed0000909
Type	gene
Organism	Sechium edule (Chayote v1)
Description	recA DNA recombination family protein
Location	LG11: 94689 .. 97990 (+)
RNA-Seq Expression	Sed0000909
Synteny	Sed0000909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAACTCAAAACCCTAAAAATGGCAGAGCTCACCAAATAATTGACACTTCGTCTTCTTCATCGTCCTCCATTAGTTGTTCTTCCGTTTCAGTTCGTTATTTGCTTAATTTTGTTGCGGAGTTGATCTCTCTGTTCTTCAGCCGAGATTTTGAAGGGGGGTTTAATGGCGAGGCTCATTCGAAATGCGTCTTTGTTCGGGCGCTCTTTTTTGCAGCACCAGGTTTCATTCATTCTCACTGCTTAAACCTTCGTTTTCATTGTACAACTCTCTCGCTGTATTTTTGCTTTTTTTGTGGCGTTTGATTACTTTACATTCATAATCTTTGTCCCATTGTCTATTTTATGTCGTTTGGCATTGCTATTTGGCGATTCAGTTTCTGTTTGCCTTCTTTTTTCAGGGCTTCAGAAGAGGCATATTGGGAACGTCTACTCAAATTTGTAATTTGTCTTCCAAAGGTGCCCAATATAAGCTCTTATTACATTATTTGTCTATAGTTTAGTAGTTTTGATTGATGAGCTTGTGGTGTTACAAATTGTTGAAATTTTATTTGCAAATTTAGTACGATCTTTATTTATTTACTTTGAGTAATGATTTCACATGGGGTCAGGATTCTCTGACATTAGACTTCTTAGAGGAAGTAAGATATATTAACACTTGTATATGCTCATGCTGACACCAAAACAAATTGTATTCACTTTTTTTTTTTCTCTCTTTATTTTTTAATAACAACAATTGAGGTTCGAGGATTCGACCCAAGACCTCTTGGTTATTGAGTTTAGGCTGAGCTGACCTACTACTCTTGTGGCAGTTTTTATATAATTGCAATTTCAAATTATATCCAACAATTGATGTATCTCAATATCAATATCGTGTCAATCTGAAGGTAAAAAAAAGAGCAAGTCACCCGATGCGAGTGATTCGGGTGAAGAAAATATATCCAAGAAAGAGTTGGCCTTGCAACAAGCCTTGGATCAGATAAATACCACATTTGGAAAGGGGTCTATCATGTGGCTTGGCCGTACTGAATCATTTAGGCATGTCCCTGTGGTTTCCACGGGTTCATTTGCTTTGGACATAGCTCTAGGAGTTGGAGGCTTTCCTAAGGTATATTGTACTTCTTTTGGATGACTTTCTCAATCACATGGCTTTGTTTTAGAAGTCTCTATGAAGCTCCTTTATTCAAAACTTCTGTTTTTTTTTTTAAATCTTCATTCAATCTTTGTAGGGTCGTGTAATCGAGATTTATGGTCCGGAGGCATCTGGAAAGACAACTCTGGCTCTGCATGTTATTGCCGAATCCCAGAAGCAAGGAGGTATTGCTTACATGAACAATGCATGCGCTCGTTTATTTTCATTATTTATATTTCTGTATGTGTATGTTATTTTGTTACTACTCGTTTAAGCTTGTATTTATTTTTTTATTACTAGTTTCTTATCCAAAATTGCTACTCAAGCCAAATGTACCACAAAATTGCTGGAAAGTCTGTGTCTTGTATAATTATATCATCCTATGGGGAAGAGGGGATGGAATGGAACTTCATTTAGTCTTAATTTTGAGTCAACAGTATACTATACGTTGCGGGGGATTTCCAAGTCAAAGTTTTCTCTTATCACACACAATCATACTTCCGAGTAATTTGTTTTGGTCTTTCTGATGCAGGTTGCTGTGTTTTTGTTGATGCGGAGCATGCTCTTGATGCAGCTCTCGCACAAGCTATTGGAGTGAACACTGAGAATCTGCTCCTATCTCAACCTGATTGTGGTGAGCAAGCTCTTAGTCTAGTGGATACTCTAATCCGAAGTGGATCAGTTGATGTTGTTGTTGTTGACAGTGTGAGTATGATGCTAACTCGTTTAAAGAAAACTGTTGGAACGTTATTGTTTGATATGTTTTATGTTTTTTTCAGTGCATGATAAAATTGTGATTGCGTCTAATGACAGGTAGCTGCGCTTGTGCCCAAAGGTGAACTCGATGGTGAGATGGGTGATGCCCACATGGCAATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCTTTGTCGCTCTCACAGACTGTATTGATTTTTATCAATCAGGTATAATATCATAATTTCAATTGTCTCAGTAATATGCTGCAATTTCTCACCTTGTAATGGTATCAGTGATTATTTTTTCATTTTTTCATATGCGTCTCGTCTTCAGGTAAGGTCAAAGCTGACTACTTTTGGAGGATTTGGTGGTCCAACCGAAGTTACCTGTGGTGGCAATGCCCTAAAGTTTTACGCTTCAATGCGACTTAATATTAAAAGGATAGGTCTTGTCAAGAAGGGGGAAGAGGTATAAACATTCATGTGCTAATTTGGATACTGACAGTGTAAAGGCATTGTTTTTCATGTATGATATAAATGTAACTCGTGATTGAGACATTTGCTTCCTATGCGTATATTAATGTATATATTGTTGTTTGTTCAATTGCAGACGGTTGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTTGCTCCTCCATTTCGAATTGCCCAATTTGAGCTCGAGTTTGGGAAAGGTGTATGTAAGGAGTCAGAGTTAATAAATCTGGGGTTGAAATACAAGTACATATCCAAGGCAGCTTCATTCTATAGCTTTAATGGTCGAAGTTTTCATGGCAAAGATCCCCTGAAAACTTTTCTATCCGAGAATGAAGAGGCTAGGGAAGGACTACTTACAGAACTTCGGAATAAACTCCTCGATGTCGAAATGGACAAGTCCCAGAAGGGAGACCAAACAGAAGGAAGTGTCCAAGCTGATGTTATCACTTCACCCGATTCTACAGACGAAGATGCGGTTACTGCTGTAGCAGTATAAATGTGTGAATGCCTTCTAATTGGCACTTCAAGCTTCACCCTATTATCTTGGATGGAGACTCTCCTTGCCAATGATAGTAGGGTTTCACCTGGCACTAATTTTTGGGTCTCCCACACATTTTAACATCCTTTTGTTTTGTGCCTTTATGGTTGTACTGATGGAAGATGACGTGCTTGTAAATATCAGCCATTTTCATGAAGGGTTCAATGCAGAAAAATGTAGATGTCATCGATGCCTCTCGGGTTGCCAATTATGCGAGTACCGTCCATGTTTTGTATTGCAACATGACTATTTGCAAATCTTAAGTAGCTGTAGAACTAATCGACTTACGTTATTTACCATCTCCCTAATCACATCTTGTTTTATTGTTGGGTATTTTTACAAGATTTACACATTAAATTTGAAGAAATTCTGGGAGTTAGATGTGCTTTTTTG

mRNA sequence

AAAAAAAAAACTCAAAACCCTAAAAATGGCAGAGCTCACCAAATAATTGACACTTCGTCTTCTTCATCGTCCTCCATTAGTTGTTCTTCCGTTTCAGTTCGTTATTTGCTTAATTTTGTTGCGGAGTTGATCTCTCTGTTCTTCAGCCGAGATTTTGAAGGGGGGTTTAATGGCGAGGCTCATTCGAAATGCGTCTTTGTTCGGGCGCTCTTTTTTGCAGCACCAGGGCTTCAGAAGAGGCATATTGGGAACGTCTACTCAAATTTGTAATTTGTCTTCCAAAGGTAAAAAAAAGAGCAAGTCACCCGATGCGAGTGATTCGGGTGAAGAAAATATATCCAAGAAAGAGTTGGCCTTGCAACAAGCCTTGGATCAGATAAATACCACATTTGGAAAGGGGTCTATCATGTGGCTTGGCCGTACTGAATCATTTAGGCATGTCCCTGTGGTTTCCACGGGTTCATTTGCTTTGGACATAGCTCTAGGAGTTGGAGGCTTTCCTAAGGGTCGTGTAATCGAGATTTATGGTCCGGAGGCATCTGGAAAGACAACTCTGGCTCTGCATGTTATTGCCGAATCCCAGAAGCAAGGAGGTTGCTGTGTTTTTGTTGATGCGGAGCATGCTCTTGATGCAGCTCTCGCACAAGCTATTGGAGTGAACACTGAGAATCTGCTCCTATCTCAACCTGATTGTGGTGAGCAAGCTCTTAGTCTAGTGGATACTCTAATCCGAAGTGGATCAGTTGATGTTGTTGTTGTTGACAGTGTAGCTGCGCTTGTGCCCAAAGGTGAACTCGATGGTGAGATGGGTGATGCCCACATGGCAATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCTTTGTCGCTCTCACAGACTGTATTGATTTTTATCAATCAGGTAAGGTCAAAGCTGACTACTTTTGGAGGATTTGGTGGTCCAACCGAAGTTACCTGTGGTGGCAATGCCCTAAAGTTTTACGCTTCAATGCGACTTAATATTAAAAGGATAGGTCTTGTCAAGAAGGGGGAAGAGACGGTTGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTTGCTCCTCCATTTCGAATTGCCCAATTTGAGCTCGAGTTTGGGAAAGGTGTATGTAAGGAGTCAGAGTTAATAAATCTGGGGTTGAAATACAAGTACATATCCAAGGCAGCTTCATTCTATAGCTTTAATGGTCGAAGTTTTCATGGCAAAGATCCCCTGAAAACTTTTCTATCCGAGAATGAAGAGGCTAGGGAAGGACTACTTACAGAACTTCGGAATAAACTCCTCGATGTCGAAATGGACAAGTCCCAGAAGGGAGACCAAACAGAAGGAAGTGTCCAAGCTGATGTTATCACTTCACCCGATTCTACAGACGAAGATGCGGTTACTGCTGTAGCAGTATAAATGTGTGAATGCCTTCTAATTGGCACTTCAAGCTTCACCCTATTATCTTGGATGGAGACTCTCCTTGCCAATGATAGTAGGGTTTCACCTGGCACTAATTTTTGGGTCTCCCACACATTTTAACATCCTTTTGTTTTGTGCCTTTATGGTTGTACTGATGGAAGATGACGTGCTTGTAAATATCAGCCATTTTCATGAAGGGTTCAATGCAGAAAAATGTAGATGTCATCGATGCCTCTCGGGTTGCCAATTATGCGAGTACCGTCCATGTTTTGTATTGCAACATGACTATTTGCAAATCTTAAGTAGCTGTAGAACTAATCGACTTACGTTATTTACCATCTCCCTAATCACATCTTGTTTTATTGTTGGGTATTTTTACAAGATTTACACATTAAATTTGAAGAAATTCTGGGAGTTAGATGTGCTTTTTTG

Coding sequence (CDS)

ATGGCGAGGCTCATTCGAAATGCGTCTTTGTTCGGGCGCTCTTTTTTGCAGCACCAGGGCTTCAGAAGAGGCATATTGGGAACGTCTACTCAAATTTGTAATTTGTCTTCCAAAGGTAAAAAAAAGAGCAAGTCACCCGATGCGAGTGATTCGGGTGAAGAAAATATATCCAAGAAAGAGTTGGCCTTGCAACAAGCCTTGGATCAGATAAATACCACATTTGGAAAGGGGTCTATCATGTGGCTTGGCCGTACTGAATCATTTAGGCATGTCCCTGTGGTTTCCACGGGTTCATTTGCTTTGGACATAGCTCTAGGAGTTGGAGGCTTTCCTAAGGGTCGTGTAATCGAGATTTATGGTCCGGAGGCATCTGGAAAGACAACTCTGGCTCTGCATGTTATTGCCGAATCCCAGAAGCAAGGAGGTTGCTGTGTTTTTGTTGATGCGGAGCATGCTCTTGATGCAGCTCTCGCACAAGCTATTGGAGTGAACACTGAGAATCTGCTCCTATCTCAACCTGATTGTGGTGAGCAAGCTCTTAGTCTAGTGGATACTCTAATCCGAAGTGGATCAGTTGATGTTGTTGTTGTTGACAGTGTAGCTGCGCTTGTGCCCAAAGGTGAACTCGATGGTGAGATGGGTGATGCCCACATGGCAATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCTTTGTCGCTCTCACAGACTGTATTGATTTTTATCAATCAGGTAAGGTCAAAGCTGACTACTTTTGGAGGATTTGGTGGTCCAACCGAAGTTACCTGTGGTGGCAATGCCCTAAAGTTTTACGCTTCAATGCGACTTAATATTAAAAGGATAGGTCTTGTCAAGAAGGGGGAAGAGACGGTTGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTTGCTCCTCCATTTCGAATTGCCCAATTTGAGCTCGAGTTTGGGAAAGGTGTATGTAAGGAGTCAGAGTTAATAAATCTGGGGTTGAAATACAAGTACATATCCAAGGCAGCTTCATTCTATAGCTTTAATGGTCGAAGTTTTCATGGCAAAGATCCCCTGAAAACTTTTCTATCCGAGAATGAAGAGGCTAGGGAAGGACTACTTACAGAACTTCGGAATAAACTCCTCGATGTCGAAATGGACAAGTCCCAGAAGGGAGACCAAACAGAAGGAAGTGTCCAAGCTGATGTTATCACTTCACCCGATTCTACAGACGAAGATGCGGTTACTGCTGTAGCAGTATAA

Protein sequence

MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQVQVKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKDPLKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGSVQADVITSPDSTDEDAVTAVAV

Homology

[Close]

BLAST of Sed0000909 vs. NCBI nr
Match: XP_038890910.1 (DNA repair protein recA homolog 3, mitochondrial [Benincasa hispida])

HSP 1 Score: 706.4 bits (1822), Expect = 1.4e-199
Identity = 367/422 (86.97%), Postives = 393/422 (93.13%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKE 60
           MARLIRNAS  GRS   H+G+RRGILG STQICN S+KGK+KSKS D SDS EEN SKKE
Sbjct: 1   MARLIRNASFLGRSIFHHEGYRRGILGASTQICNFSTKGKRKSKSSDGSDSCEENASKKE 60

Query: 61  LALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYG 120
           LALQQALDQI ++FGKGSIMWLGR+ S RHVPVVSTGSFALDIALG+GG PKGRVIEIYG
Sbjct: 61  LALQQALDQITSSFGKGSIMWLGRSGSSRHVPVVSTGSFALDIALGIGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQVQ 300
           TVLIFINQVRSKL+TFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKGEET+GSQVQ
Sbjct: 241 TVLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETLGSQVQ 300

Query: 301 VKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKDP 360
           VKVVKNKLAPPFRIAQFELEFGKG+CK SE+INLGLKYK++SKA + Y+FNGRSF GKD 
Sbjct: 301 VKVVKNKLAPPFRIAQFELEFGKGICKLSEIINLGLKYKFMSKAGAIYNFNGRSFRGKDA 360

Query: 361 LKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGSVQADVITSPDSTDEDAVTAV 420
           LKTFLSEN++ARE L+T+LR++LLDVEM K + GD+TEGS+Q DV TSPDSTDEDAVTAV
Sbjct: 361 LKTFLSENDDAREELITKLRDQLLDVEMGKPRNGDETEGSLQEDVTTSPDSTDEDAVTAV 420

Query: 421 AV 423
            V
Sbjct: 421 EV 422

[Close]

BLAST of Sed0000909 vs. NCBI nr
Match: XP_022154752.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Momordica charantia])

HSP 1 Score: 701.4 bits (1809), Expect = 4.6e-198
Identity = 365/422 (86.49%), Postives = 394/422 (93.36%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKE 60
           MARLIR+AS F RS   H+GFRRGILGTSTQIC+ S+KG++KSKS D SDS EEN+SKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYG 120
           LALQQALDQI +TFGKGSIMWLGR+ + RHVPVVSTGSFALDIALGVGG PKGRVIEIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQVQ 300
           T+LIFINQVRSKL+TFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEET+GSQVQ
Sbjct: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETLGSQVQ 300

Query: 301 VKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKDP 360
           VKVVKNKLAPPFR AQFELEFGKG+CKESE+INLGLKYK++SKA +FYSFNGRSFHGKD 
Sbjct: 301 VKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKDA 360

Query: 361 LKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGSVQADVITSPDSTDEDAVTAV 420
           LKTFL++N +ARE L+T+LR+KLLD++MDK   GD+TE S + D+I SPDSTDEDAVTAV
Sbjct: 361 LKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEESAREDII-SPDSTDEDAVTAV 420

Query: 421 AV 423
            V
Sbjct: 421 EV 421

[Close]

BLAST of Sed0000909 vs. NCBI nr
Match: XP_022154751.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X3 [Momordica charantia])

HSP 1 Score: 698.0 bits (1800), Expect = 5.1e-197
Identity = 366/423 (86.52%), Postives = 394/423 (93.14%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQH-QGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKK 60
           MARLIR+AS F RS   H QGFRRGILGTSTQIC+ S+KG++KSKS D SDS EEN+SKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 61  ELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIY 120
           ELALQQALDQI +TFGKGSIMWLGR+ + RHVPVVSTGSFALDIALGVGG PKGRVIEIY
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIY 120

Query: 121 GPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQA 180
           GPEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQA
Sbjct: 121 GPEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180

Query: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240
           LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS
Sbjct: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 241 QTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQV 300
           QT+LIFINQVRSKL+TFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEET+GSQV
Sbjct: 241 QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETLGSQV 300

Query: 301 QVKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKD 360
           QVKVVKNKLAPPFR AQFELEFGKG+CKESE+INLGLKYK++SKA +FYSFNGRSFHGKD
Sbjct: 301 QVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKD 360

Query: 361 PLKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGSVQADVITSPDSTDEDAVTA 420
            LKTFL++N +ARE L+T+LR+KLLD++MDK   GD+TE S + D+I SPDSTDEDAVTA
Sbjct: 361 ALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEESAREDII-SPDSTDEDAVTA 420

Query: 421 VAV 423
           V V
Sbjct: 421 VEV 422

[Close]

BLAST of Sed0000909 vs. NCBI nr
Match: XP_022154750.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X2 [Momordica charantia])

HSP 1 Score: 685.3 bits (1767), Expect = 3.4e-193
Identity = 365/453 (80.57%), Postives = 394/453 (86.98%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKE 60
           MARLIR+AS F RS   H+GFRRGILGTSTQIC+ S+KG++KSKS D SDS EEN+SKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYG 120
           LALQQALDQI +TFGKGSIMWLGR+ + RHVPVVSTGSFALDIALGVGG PKGRVIEIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TVLIFIN-------------------------------QVRSKLTTFGGFGGPTEVTCGG 300
           T+LIFIN                               QVRSKL+TFGGFGGPTEVTCGG
Sbjct: 241 TILIFINQVLFCVRLSRSILQFLMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCGG 300

Query: 301 NALKFYASMRLNIKRIGLVKKGEETVGSQVQVKVVKNKLAPPFRIAQFELEFGKGVCKES 360
           NALKFYASMRLNIKRIGLVKKGEET+GSQVQVKVVKNKLAPPFR AQFELEFGKG+CKES
Sbjct: 301 NALKFYASMRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKES 360

Query: 361 ELINLGLKYKYISKAASFYSFNGRSFHGKDPLKTFLSENEEAREGLLTELRNKLLDVEMD 420
           E+INLGLKYK++SKA +FYSFNGRSFHGKD LKTFL++N +ARE L+T+LR+KLLD++MD
Sbjct: 361 EIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMD 420

Query: 421 KSQKGDQTEGSVQADVITSPDSTDEDAVTAVAV 423
           K   GD+TE S + D+I SPDSTDEDAVTAV V
Sbjct: 421 KRGNGDETEESAREDII-SPDSTDEDAVTAVEV 452

[Close]

BLAST of Sed0000909 vs. NCBI nr
Match: XP_022154749.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 681.8 bits (1758), Expect = 3.8e-192
Identity = 366/454 (80.62%), Postives = 394/454 (86.78%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQH-QGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKK 60
           MARLIR+AS F RS   H QGFRRGILGTSTQIC+ S+KG++KSKS D SDS EEN+SKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 61  ELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIY 120
           ELALQQALDQI +TFGKGSIMWLGR+ + RHVPVVSTGSFALDIALGVGG PKGRVIEIY
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIY 120

Query: 121 GPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQA 180
           GPEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQA
Sbjct: 121 GPEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180

Query: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240
           LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS
Sbjct: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 241 QTVLIFIN-------------------------------QVRSKLTTFGGFGGPTEVTCG 300
           QT+LIFIN                               QVRSKL+TFGGFGGPTEVTCG
Sbjct: 241 QTILIFINQVLFCVRLSRSILQFLMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCG 300

Query: 301 GNALKFYASMRLNIKRIGLVKKGEETVGSQVQVKVVKNKLAPPFRIAQFELEFGKGVCKE 360
           GNALKFYASMRLNIKRIGLVKKGEET+GSQVQVKVVKNKLAPPFR AQFELEFGKG+CKE
Sbjct: 301 GNALKFYASMRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKE 360

Query: 361 SELINLGLKYKYISKAASFYSFNGRSFHGKDPLKTFLSENEEAREGLLTELRNKLLDVEM 420
           SE+INLGLKYK++SKA +FYSFNGRSFHGKD LKTFL++N +ARE L+T+LR+KLLD++M
Sbjct: 361 SEIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDM 420

Query: 421 DKSQKGDQTEGSVQADVITSPDSTDEDAVTAVAV 423
           DK   GD+TE S + D+I SPDSTDEDAVTAV V
Sbjct: 421 DKRGNGDETEESAREDII-SPDSTDEDAVTAVEV 453

[Close]

BLAST of Sed0000909 vs. ExPASy Swiss-Prot
Match: Q9ZUP2 (DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2)

HSP 1 Score: 578.9 bits (1491), Expect = 4.5e-164
Identity = 300/420 (71.43%), Postives = 356/420 (84.76%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKE 60
           MAR++RN      S    +  RR ++GTS Q+   ++K KKKSKS D + S EE +SKKE
Sbjct: 1   MARILRNVYSLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKSKS-DGNGSSEEGMSKKE 60

Query: 61  LALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYG 120
           +ALQQALDQI ++FGKGSIM+LGR  S R+VPV STGSFALD+ALGVGG PKGRV+EIYG
Sbjct: 61  IALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAE+QKQGG CVFVDAEHALD++LA+AIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDV+VVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQVQ 300
           T+LIFINQVRSKL+TFGGFGGPTEVTCGGNALKFYASMRLNIKRIGL+KKGEET GSQV 
Sbjct: 241 TLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVS 300

Query: 301 VKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKDP 360
           VK+VKNKLAPPFR AQFELEFGKG+CK +E+I+L +K+K+I+K  +FY+ NG+++HGK+ 
Sbjct: 301 VKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYHGKEA 360

Query: 361 LKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGSVQADVITSPDSTDEDAVTAV 420
           LK FL +NE  +E L+ +L++KL+  E    +   ++E      V+ SPD+TD+++   V
Sbjct: 361 LKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDESPALV 419

[Close]

BLAST of Sed0000909 vs. ExPASy Swiss-Prot
Match: Q31F89 (Protein RecA OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=recA PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-100
Identity = 182/327 (55.66%), Postives = 251/327 (76.76%), Query Frame = 0


Query: 59  KELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEI 118
           K+ AL+ AL QI   FGKGSIM +G   + R +  VSTGS  LD+ALG+GG P+GRV+EI
Sbjct: 5   KKKALEAALGQIEKQFGKGSIMRMGDKGAIRDIDSVSTGSLGLDVALGIGGLPRGRVVEI 64

Query: 119 YGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQ 178
           YGPE+SGKTTL LH IAE QK GG   FVDAEHALD   A+ +GV+ +NLL+SQPD GEQ
Sbjct: 65  YGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPIYAEKLGVDIDNLLVSQPDTGEQ 124

Query: 179 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 238
           AL + D+L+RSG+VD+V+VDSVAAL PK E++G+MGD+HM +QARLMSQALRKL+ ++  
Sbjct: 125 ALEITDSLVRSGAVDIVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184

Query: 239 SQTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQ 298
           + T++IFINQ+R K+     FG P E T GGNALKFY+S+RL+I+RIG +KKG+E +G++
Sbjct: 185 TNTLVIFINQIRMKIGVM--FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGDEILGNE 244

Query: 299 VQVKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSF-HG 358
            +VKVVKNK++PPF+  +FE+ +G+G+ +E E+I+LG+K K I KA ++YS+ G+    G
Sbjct: 245 TRVKVVKNKVSPPFKQVEFEILYGQGISREGEVIDLGVKEKLIEKAGAWYSYQGQKIGQG 304

Query: 359 KDPLKTFLSENEEAREGLLTELRNKLL 385
           KD ++ FL +N +  E L  +++ +L+
Sbjct: 305 KDNVRQFLKDNPDIYETLQVQIKERLM 328

[Close]

BLAST of Sed0000909 vs. ExPASy Swiss-Prot
Match: Q2W9P9 (Protein RecA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=recA PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.6e-100
Identity = 184/317 (58.04%), Postives = 245/317 (77.29%), Query Frame = 0


Query: 53  EENISKKELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPK 112
           +++   ++ AL+ A+ QI   FGKGSIM LG  +      VVSTGS  LD+ALG+GG P+
Sbjct: 10  DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 69

Query: 113 GRVIEIYGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQ 172
           GR+IE+YGPE+SGKTTLALH+IAE+QK+GG C FVDAEHALD + A+ +GVN + LL+SQ
Sbjct: 70  GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQ 129

Query: 173 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 232
           PD GEQAL + DTL+RSG+VDV+VVDSVAALVP+ EL+GEMGD HM + ARLMSQALRKL
Sbjct: 130 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189

Query: 233 SHSLSLSQTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGE 292
           + S+S S+T++IFINQ+R K+     FG P E T GGNALKFYAS+R+ I+R+G +K  +
Sbjct: 190 TGSVSKSKTIVIFINQIRMKIGVM--FGNP-ETTTGGNALKFYASVRMEIRRVGAIKDRD 249

Query: 293 ETVGSQVQVKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNG 352
           E VG+Q +VKVVKNKLAPPF++  F++ +G+G+ K  ELI+LG+K   + K+ +++S+N 
Sbjct: 250 EVVGNQTRVKVVKNKLAPPFKVVDFDIMYGEGISKMGELIDLGVKANVVEKSGAWFSYNS 309

Query: 353 -RSFHGKDPLKTFLSEN 369
            R   G++  KTFL EN
Sbjct: 310 TRIGQGRENAKTFLREN 323

[Close]

BLAST of Sed0000909 vs. ExPASy Swiss-Prot
Match: B8GQV3 (Protein RecA OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=recA PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.7e-100
Identity = 191/343 (55.69%), Postives = 256/343 (74.64%), Query Frame = 0


Query: 59  KELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEI 118
           ++ AL  AL QI   FGKG++M +G + + R V  +STGS ALDIALG+GG PKGRV+EI
Sbjct: 5   RKKALSAALGQIERQFGKGAVMRMGDSTAVRDVEAISTGSLALDIALGIGGLPKGRVVEI 64

Query: 119 YGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQ 178
           YGPE+SGKTTL L VIAE QKQGG   FVDAEHALD   A+ +GVN ++LL+SQPD GEQ
Sbjct: 65  YGPESSGKTTLTLQVIAECQKQGGTAAFVDAEHALDPGYAEKLGVNVDDLLVSQPDTGEQ 124

Query: 179 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 238
           AL + D L+RSG+VDVVVVDSVAAL PK E++GEMGDAH+ +QARLMSQALRKL+ ++  
Sbjct: 125 ALEIADMLVRSGAVDVVVVDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRKLTANIKR 184

Query: 239 SQTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQ 298
           S T++IFINQ+R K+     FG P E T GGNALKFYAS+RL+I+R G +KKG+E +G++
Sbjct: 185 SNTLVIFINQIRMKIGVM--FGNP-ETTTGGNALKFYASVRLDIRRTGAIKKGDEVIGNE 244

Query: 299 VQVKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNG-RSFHG 358
            +VKVVKNK+APPF+ A+FE+ +G+G+ +  E+I++G++   + K+ ++YS+NG R   G
Sbjct: 245 TRVKVVKNKVAPPFKQAEFEILYGEGISRLGEVIDIGVQDGIVDKSGAWYSYNGERIGQG 304

Query: 359 KDPLKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGS 401
           KD  +TFL E+ E    +  ++R K L     +S K D+ E +
Sbjct: 305 KDNARTFLKEHPEMAGEIERQIREKHLP---KRSAKADEAESA 341

[Close]

BLAST of Sed0000909 vs. ExPASy Swiss-Prot
Match: O32377 (Protein RecA OS=Allochromatium vinosum OX=1049 GN=recA PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 3.5e-100
Identity = 186/327 (56.88%), Postives = 248/327 (75.84%), Query Frame = 0


Query: 59  KELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEI 118
           ++ AL  AL QI   FGKGS+M +G   + R++  +STGS  LD+ALG+GG PKGRVIEI
Sbjct: 5   RKKALAAALTQIEKQFGKGSVMRMGDVGAVRNIEAISTGSLGLDLALGIGGVPKGRVIEI 64

Query: 119 YGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQ 178
           YGPE+SGKTTL LH+IAESQK GG   FVDAEHALD   A+ +GVN  +LL+SQPD GEQ
Sbjct: 65  YGPESSGKTTLTLHIIAESQKLGGTAAFVDAEHALDPVYAEKLGVNMTDLLVSQPDTGEQ 124

Query: 179 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 238
           AL + D L+RSG+VDVVVVDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++  
Sbjct: 125 ALEITDMLVRSGAVDVVVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKR 184

Query: 239 SQTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQ 298
           S   +IFINQ+R K+     FG P E T GGNALKFYAS+RL+I+R G +KKG+E +G++
Sbjct: 185 SNCCVIFINQIRMKIGVM--FGSP-ETTTGGNALKFYASVRLDIRRTGAIKKGDEVIGNE 244

Query: 299 VQVKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNG-RSFHG 358
            +VKVVKNK+APPFR A+F++ +G+G+ +E E+I+LG+   +I K+ ++YS++G R   G
Sbjct: 245 TKVKVVKNKVAPPFRQAEFDILYGQGISREGEIIDLGVAEGFIDKSGAWYSYDGNRIGQG 304

Query: 359 KDPLKTFLSENEEAREGLLTELRNKLL 385
           KD ++ FL EN    + +   +R+KLL
Sbjct: 305 KDNVRNFLCENPGIAQAIEARIRDKLL 328

[Close]

BLAST of Sed0000909 vs. ExPASy TrEMBL
Match: A0A6J1DMJ4 (DNA repair protein recA homolog 3, mitochondrial-like isoform X4 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.2e-198
Identity = 365/422 (86.49%), Postives = 394/422 (93.36%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKE 60
           MARLIR+AS F RS   H+GFRRGILGTSTQIC+ S+KG++KSKS D SDS EEN+SKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYG 120
           LALQQALDQI +TFGKGSIMWLGR+ + RHVPVVSTGSFALDIALGVGG PKGRVIEIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQVQ 300
           T+LIFINQVRSKL+TFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEET+GSQVQ
Sbjct: 241 TILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETLGSQVQ 300

Query: 301 VKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKDP 360
           VKVVKNKLAPPFR AQFELEFGKG+CKESE+INLGLKYK++SKA +FYSFNGRSFHGKD 
Sbjct: 301 VKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKDA 360

Query: 361 LKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGSVQADVITSPDSTDEDAVTAV 420
           LKTFL++N +ARE L+T+LR+KLLD++MDK   GD+TE S + D+I SPDSTDEDAVTAV
Sbjct: 361 LKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEESAREDII-SPDSTDEDAVTAV 420

Query: 421 AV 423
            V
Sbjct: 421 EV 421

[Close]

BLAST of Sed0000909 vs. ExPASy TrEMBL
Match: A0A6J1DPM9 (DNA repair protein recA homolog 3, mitochondrial-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.5e-197
Identity = 366/423 (86.52%), Postives = 394/423 (93.14%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQH-QGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKK 60
           MARLIR+AS F RS   H QGFRRGILGTSTQIC+ S+KG++KSKS D SDS EEN+SKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 61  ELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIY 120
           ELALQQALDQI +TFGKGSIMWLGR+ + RHVPVVSTGSFALDIALGVGG PKGRVIEIY
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIY 120

Query: 121 GPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQA 180
           GPEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQA
Sbjct: 121 GPEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180

Query: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240
           LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS
Sbjct: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 241 QTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQV 300
           QT+LIFINQVRSKL+TFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEET+GSQV
Sbjct: 241 QTILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETLGSQV 300

Query: 301 QVKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKD 360
           QVKVVKNKLAPPFR AQFELEFGKG+CKESE+INLGLKYK++SKA +FYSFNGRSFHGKD
Sbjct: 301 QVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKD 360

Query: 361 PLKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGSVQADVITSPDSTDEDAVTA 420
            LKTFL++N +ARE L+T+LR+KLLD++MDK   GD+TE S + D+I SPDSTDEDAVTA
Sbjct: 361 ALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEESAREDII-SPDSTDEDAVTA 420

Query: 421 VAV 423
           V V
Sbjct: 421 VEV 422

[Close]

BLAST of Sed0000909 vs. ExPASy TrEMBL
Match: A0A6J1DKI3 (DNA repair protein recA homolog 3, mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.7e-193
Identity = 365/453 (80.57%), Postives = 394/453 (86.98%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKE 60
           MARLIR+AS F RS   H+GFRRGILGTSTQIC+ S+KG++KSKS D SDS EEN+SKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYG 120
           LALQQALDQI +TFGKGSIMWLGR+ + RHVPVVSTGSFALDIALGVGG PKGRVIEIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TVLIFIN-------------------------------QVRSKLTTFGGFGGPTEVTCGG 300
           T+LIFIN                               QVRSKL+TFGGFGGPTEVTCGG
Sbjct: 241 TILIFINQVLFCVRLSRSILQFLMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCGG 300

Query: 301 NALKFYASMRLNIKRIGLVKKGEETVGSQVQVKVVKNKLAPPFRIAQFELEFGKGVCKES 360
           NALKFYASMRLNIKRIGLVKKGEET+GSQVQVKVVKNKLAPPFR AQFELEFGKG+CKES
Sbjct: 301 NALKFYASMRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKES 360

Query: 361 ELINLGLKYKYISKAASFYSFNGRSFHGKDPLKTFLSENEEAREGLLTELRNKLLDVEMD 420
           E+INLGLKYK++SKA +FYSFNGRSFHGKD LKTFL++N +ARE L+T+LR+KLLD++MD
Sbjct: 361 EIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMD 420

Query: 421 KSQKGDQTEGSVQADVITSPDSTDEDAVTAVAV 423
           K   GD+TE S + D+I SPDSTDEDAVTAV V
Sbjct: 421 KRGNGDETEESAREDII-SPDSTDEDAVTAVEV 452

[Close]

BLAST of Sed0000909 vs. ExPASy TrEMBL
Match: A0A6J1DN29 (DNA repair protein recA homolog 3, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.8e-192
Identity = 366/454 (80.62%), Postives = 394/454 (86.78%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQH-QGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKK 60
           MARLIR+AS F RS   H QGFRRGILGTSTQIC+ S+KG++KSKS D SDS EEN+SKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 61  ELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIY 120
           ELALQQALDQI +TFGKGSIMWLGR+ + RHVPVVSTGSFALDIALGVGG PKGRVIEIY
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPKGRVIEIY 120

Query: 121 GPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQA 180
           GPEASGKTTLALHVIAESQKQGG CVFVDAEHALD ALAQAIGVNTENLLLSQPDCGEQA
Sbjct: 121 GPEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQA 180

Query: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240
           LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS
Sbjct: 181 LSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLS 240

Query: 241 QTVLIFIN-------------------------------QVRSKLTTFGGFGGPTEVTCG 300
           QT+LIFIN                               QVRSKL+TFGGFGGPTEVTCG
Sbjct: 241 QTILIFINQVLFCVRLSRSILQFLMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCG 300

Query: 301 GNALKFYASMRLNIKRIGLVKKGEETVGSQVQVKVVKNKLAPPFRIAQFELEFGKGVCKE 360
           GNALKFYASMRLNIKRIGLVKKGEET+GSQVQVKVVKNKLAPPFR AQFELEFGKG+CKE
Sbjct: 301 GNALKFYASMRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKE 360

Query: 361 SELINLGLKYKYISKAASFYSFNGRSFHGKDPLKTFLSENEEAREGLLTELRNKLLDVEM 420
           SE+INLGLKYK++SKA +FYSFNGRSFHGKD LKTFL++N +ARE L+T+LR+KLLD++M
Sbjct: 361 SEIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDM 420

Query: 421 DKSQKGDQTEGSVQADVITSPDSTDEDAVTAVAV 423
           DK   GD+TE S + D+I SPDSTDEDAVTAV V
Sbjct: 421 DKRGNGDETEESAREDII-SPDSTDEDAVTAVEV 453

[Close]

BLAST of Sed0000909 vs. ExPASy TrEMBL
Match: A0A6J1KB04 (DNA repair protein recA homolog 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493837 PE=3 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 5.2e-187
Identity = 348/423 (82.27%), Postives = 379/423 (89.60%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKE 60
           MARLIRNAS  GR   QH+ +RRGILGTSTQ+C+ S+KGK+KSKS D SDS EEN+SKKE
Sbjct: 1   MARLIRNASFVGRCLFQHERYRRGILGTSTQLCSFSTKGKRKSKSSDGSDSCEENLSKKE 60

Query: 61  LALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYG 120
           LALQQALDQI +TFGKGSIMWLGR+ S RHVPVV TGSF LD+ALG+GG PKGRVIEIYG
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVSSRHVPVVPTGSFELDMALGIGGLPKGRVIEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAESQKQGG CVFVDAEHALD +LAQAIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAESQKQGGYCVFVDAEHALDPSLAQAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL HSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQ 240

Query: 241 TVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQVQ 300
           TVLIFINQVRSKL+TF GFGGPTEVTCGGNALKFYAS+RLNI+R+   K GEE VGSQVQ
Sbjct: 241 TVLIFINQVRSKLSTF-GFGGPTEVTCGGNALKFYASVRLNIRRVAFAKNGEEIVGSQVQ 300

Query: 301 VKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKDP 360
           VKVVKNKLAPPFR AQF+LEFGKG+CKESE+INLGLKYK++S+A  FYS NGR+F GK+ 
Sbjct: 301 VKVVKNKLAPPFRTAQFDLEFGKGICKESEIINLGLKYKFMSRAGGFYSCNGRNFRGKEA 360

Query: 361 LKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQT-EGSVQADVITSPDSTDEDAVTA 420
           LKTFLSENE+ RE L T+LR+K+ D +  KS   D+T EGSVQ D+ITSPDSTDEDAVTA
Sbjct: 361 LKTFLSENEDVREDLFTKLRDKIHDEQRGKSPNRDETDEGSVQEDIITSPDSTDEDAVTA 420

Query: 421 VAV 423
           V V
Sbjct: 421 VEV 422

[Close]

BLAST of Sed0000909 vs. TAIR 10
Match: AT2G19490.1 (recA DNA recombination family protein )

HSP 1 Score: 578.9 bits (1491), Expect = 3.2e-165
Identity = 300/420 (71.43%), Postives = 356/420 (84.76%), Query Frame = 0


Query: 1   MARLIRNASLFGRSFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASDSGEENISKKE 60
           MAR++RN      S    +  RR ++GTS Q+   ++K KKKSKS D + S EE +SKKE
Sbjct: 1   MARILRNVYSLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKSKS-DGNGSSEEGMSKKE 60

Query: 61  LALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYG 120
           +ALQQALDQI ++FGKGSIM+LGR  S R+VPV STGSFALD+ALGVGG PKGRV+EIYG
Sbjct: 61  IALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYG 120

Query: 121 PEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQAL 180
           PEASGKTTLALHVIAE+QKQGG CVFVDAEHALD++LA+AIGVNTENLLLSQPDCGEQAL
Sbjct: 121 PEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQAL 180

Query: 181 SLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240
           SLVDTLIRSGSVDV+VVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQ
Sbjct: 181 SLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQ 240

Query: 241 TVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQVQ 300
           T+LIFINQVRSKL+TFGGFGGPTEVTCGGNALKFYASMRLNIKRIGL+KKGEET GSQV 
Sbjct: 241 TLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVS 300

Query: 301 VKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKDP 360
           VK+VKNKLAPPFR AQFELEFGKG+CK +E+I+L +K+K+I+K  +FY+ NG+++HGK+ 
Sbjct: 301 VKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYHGKEA 360

Query: 361 LKTFLSENEEAREGLLTELRNKLLDVEMDKSQKGDQTEGSVQADVITSPDSTDEDAVTAV 420
           LK FL +NE  +E L+ +L++KL+  E    +   ++E      V+ SPD+TD+++   V
Sbjct: 361 LKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLRVVVSPDNTDDESPALV 419

[Close]

BLAST of Sed0000909 vs. TAIR 10
Match: AT3G10140.1 (RECA homolog 3 )

HSP 1 Score: 301.6 bits (771), Expect = 9.9e-82
Identity = 170/376 (45.21%), Postives = 244/376 (64.89%), Query Frame = 0


Query: 14  SFLQHQGFRRGILGTSTQICNLSSKGKKKSKSPDASD------SGEENISKKELALQQAL 73
           S+L     RR +L  S        + +  S   +ASD        +  +++K+ AL  AL
Sbjct: 17  SYLSQLNGRRSVLACS------GYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLAL 76

Query: 74  DQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYGPEASGKT 133
            Q++  F K S + L R    R V V+STGS  LD+ALGVGG PKGR++E+YG EASGKT
Sbjct: 77  SQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKT 136

Query: 134 TLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQALSLVDTLI 193
           TLALH+I E+QK GG C ++DAE+A+D +LA++IGVNTE LL+S+P   E+ L++VD L 
Sbjct: 137 TLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLT 196

Query: 194 RSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFIN 253
           +SGSVDV+VVDSVAAL P+ ELD  +G+ +   Q+R+M+QALRK+ +S+  SQT+++F+N
Sbjct: 197 KSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLN 256

Query: 254 QVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEETVGSQVQVKVVKNK 313
           QVRS + +   F    EVTCGGNAL F+A++RL + R GL+K   +  G  V V+VVKNK
Sbjct: 257 QVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNK 316

Query: 314 LAPPFRIAQFELEFGKGVCKESELINLGLKYKYISKAASFYSFNGRSFHGKDPLKTFLSE 373
           LAP  + ++  + FG G   E E++ L  ++  I +  + Y   G    GKD  + +L E
Sbjct: 317 LAPGKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVE 376

Query: 374 NEEAREGLLTELRNKL 384
           N+EA + ++  LRN+L
Sbjct: 377 NKEALDTVVAILRNQL 386

[Close]

BLAST of Sed0000909 vs. TAIR 10
Match: AT3G32920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-79
Identity = 159/214 (74.30%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 80  MWLGRTESFRHVPVVSTGSFALDIALGVGGFPKGRVIEIYGPEASGKTTLALHVIAESQK 139
           M+L R  S R+VPV STGSFALD+ALGVGG PKGR++EIYGPEASGKT LALH+++    
Sbjct: 1   MYLSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLS---- 60

Query: 140 QGGCCVFVDAEHALDAALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDS 199
                        L  +LA+AIGVNTENLLLSQPDCG+QALSLVDTLI+SGSVDV+VVDS
Sbjct: 61  -----------MLLIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDS 120

Query: 200 VAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQVRSKLTTFGGF 259
           VAALVPKGELDGEMGDAHMA+QARLMSQALRK SHSL LSQT+LIFINQVR +      F
Sbjct: 121 VAALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRER------F 180

Query: 260 GGPTEVTCGGNALKFYASMRLNIKRIGLVKKGEE 294
           GGPTEVT GGNALKFYA MRL+IKRIGL+KKGEE
Sbjct: 181 GGPTEVTSGGNALKFYAPMRLDIKRIGLIKKGEE 193

[Close]

BLAST of Sed0000909 vs. TAIR 10
Match: AT1G79050.1 (recA DNA recombination family protein )

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-74
Identity = 161/350 (46.00%), Postives = 234/350 (66.86%), Query Frame = 0


Query: 45  SPDASDSGEENISKKELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIA 104
           SPDA    +     ++ AL+ A++ IN++FGKGS+  LG +     V   S+G   LD+A
Sbjct: 73  SPDA----DSRFLDRQKALEAAMNDINSSFGKGSVTRLG-SAGGALVETFSSGILTLDLA 132

Query: 105 LGVGGFPKGRVIEIYGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVN 164
           LG GG PKGRV+EIYGPE+SGKTTLALH IAE QK GG  + VDAEHA D A ++A+GV+
Sbjct: 133 LG-GGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVD 192

Query: 165 TENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARL 224
            ENL++ QPD GE AL   D + RSG+VD++ VDSV+AL P+ E++GE+G   M +QARL
Sbjct: 193 VENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARL 252

Query: 225 MSQALRKLSHSLSLSQTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKR 284
           MSQALRK+S + S +   LIF+NQ+R K+   G + G  EVT GG ALKF+AS+RL I+ 
Sbjct: 253 MSQALRKMSGNASKAGCTLIFLNQIRYKI---GVYYGNPEVTSGGIALKFFASVRLEIRS 312

Query: 285 IGLVK--KGEETVGSQVQVKVVKNKLAPPFRIAQFELEFGKGVCKESELINLGLKYKYIS 344
            G +K  KG+E +G + +V+V K+K++ P++ A+FE+ FG+GV K   +++     + + 
Sbjct: 313 AGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVV 372

Query: 345 KAASFYSF-NGRSFHGKDPLKTFLSENEEAREGLLTELRNKLLDVEMDKS 392
           K  S+YS+ + R   G++     L EN   ++ +  ++R  +LD E+ +S
Sbjct: 373 KKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRS 413

[Close]

BLAST of Sed0000909 vs. TAIR 10
Match: AT1G79050.2 (recA DNA recombination family protein )

HSP 1 Score: 250.0 bits (637), Expect = 3.4e-66
Identity = 139/271 (51.29%), Postives = 191/271 (70.48%), Query Frame = 0


Query: 45  SPDASDSGEENISKKELALQQALDQINTTFGKGSIMWLGRTESFRHVPVVSTGSFALDIA 104
           SPDA    +     ++ AL+ A++ IN++FGKGS+  LG +     V   S+G   LD+A
Sbjct: 73  SPDA----DSRFLDRQKALEAAMNDINSSFGKGSVTRLG-SAGGALVETFSSGILTLDLA 132

Query: 105 LGVGGFPKGRVIEIYGPEASGKTTLALHVIAESQKQGGCCVFVDAEHALDAALAQAIGVN 164
           LG GG PKGRV+EIYGPE+SGKTTLALH IAE QK GG  + VDAEHA D A ++A+GV+
Sbjct: 133 LG-GGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVD 192

Query: 165 TENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARL 224
            ENL++ QPD GE AL   D + RSG+VD++ VDSV+AL P+ E++GE+G   M +QARL
Sbjct: 193 VENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARL 252

Query: 225 MSQALRKLSHSLSLSQTVLIFINQVRSKLTTFGGFGGPTEVTCGGNALKFYASMRLNIKR 284
           MSQALRK+S + S +   LIF+NQ+R K+   G + G  EVT GG ALKF+AS+RL I+ 
Sbjct: 253 MSQALRKMSGNASKAGCTLIFLNQIRYKI---GVYYGNPEVTSGGIALKFFASVRLEIRS 312

Query: 285 IGLVK--KGEETVGSQVQVKVVKNKLAPPFR 314
            G +K  KG+E +G + +V+V K+K++ P++
Sbjct: 313 AGKIKSSKGDEDIGLRARVRVQKSKVSRPYK 334

The following BLAST results are available for this feature:

BLAST of Sed0000909 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890910.1	1.4e-199	86.97	DNA repair protein recA homolog 3, mitochondrial [Benincasa hispida]	[more]
XP_022154752.1	4.6e-198	86.49	DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Momordica char...	[more]
XP_022154751.1	5.1e-197	86.52	DNA repair protein recA homolog 3, mitochondrial-like isoform X3 [Momordica char...	[more]
XP_022154750.1	3.4e-193	80.57	DNA repair protein recA homolog 3, mitochondrial-like isoform X2 [Momordica char...	[more]
XP_022154749.1	3.8e-192	80.62	DNA repair protein recA homolog 3, mitochondrial-like isoform X1 [Momordica char...	[more]

BLAST of Sed0000909 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUP2	4.5e-164	71.43	DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q31F89	1.2e-100	55.66	Protein RecA OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 ...	[more]
Q2W9P9	1.6e-100	58.04	Protein RecA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=3421...	[more]
B8GQV3	2.7e-100	55.69	Protein RecA OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=re...	[more]
O32377	3.5e-100	56.88	Protein RecA OS=Allochromatium vinosum OX=1049 GN=recA PE=3 SV=1	[more]

BLAST of Sed0000909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMJ4	2.2e-198	86.49	DNA repair protein recA homolog 3, mitochondrial-like isoform X4 OS=Momordica ch...	[more]
A0A6J1DPM9	2.5e-197	86.52	DNA repair protein recA homolog 3, mitochondrial-like isoform X3 OS=Momordica ch...	[more]
A0A6J1DKI3	1.7e-193	80.57	DNA repair protein recA homolog 3, mitochondrial-like isoform X2 OS=Momordica ch...	[more]
A0A6J1DN29	1.8e-192	80.62	DNA repair protein recA homolog 3, mitochondrial-like isoform X1 OS=Momordica ch...	[more]
A0A6J1KB04	5.2e-187	82.27	DNA repair protein recA homolog 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Sed0000909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19490.1	3.2e-165	71.43	recA DNA recombination family protein	[more]
AT3G10140.1	9.9e-82	45.21	RECA homolog 3	[more]
AT3G32920.1	1.6e-79	74.30	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G79050.1	1.2e-74	46.00	recA DNA recombination family protein	[more]
AT1G79050.2	3.4e-66	51.29	recA DNA recombination family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 182..211 score: 63.3 coord: 220..249 score: 60.5 coord: 301..330 score: 53.87 coord: 354..371 score: 29.63 coord: 148..177 score: 63.25 coord: 268..296 score: 60.48
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 62..325 e-value: 2.1E-119 score: 397.8
IPR013765	DNA recombination and repair protein RecA	TIGRFAM	TIGR02012	TIGR02012	coord: 59..377 e-value: 1.1E-135 score: 450.0
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 1..412
IPR013765	DNA recombination and repair protein RecA	HAMAP	MF_00268	RecA	coord: 59..386 score: 42.674942
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 112..286 e-value: 2.7E-7 score: 40.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 89..395 e-value: 4.6E-107 score: 359.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 62..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..417
None	No IPR available	PANTHER	PTHR45900:SF9	REPAIR PROTEIN RECA, PUTATIVE-RELATED	coord: 1..412
IPR020584	DNA recombination/repair protein RecA, conserved site	PROSITE	PS00321	RECA_1	coord: 271..279
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 259..330 score: 26.038006
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 90..249 score: 38.285954
IPR023400	DNA recombination and repair protein RecA, C-terminal	SUPERFAMILY	54752	RecA protein, C-terminal domain	coord: 327..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000909.1	Sed0000909.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding