Sed0000841 (gene) Chayote v1

Overview


Name	Sed0000841
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein TIC 20
Location	LG05: 33037243 .. 33039913 (-)
RNA-Seq Expression	Sed0000841
Synteny	Sed0000841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCCCTGTGCCCTCCGCCACCCGACCCTTTTACGCGGAAAACAGAAAAGATGTTTGCGGTGGCTCCGATCAGCGCCCGATCTCACTGCAACTCACCAAATCCGCCCCTTCCGCCGCCGCATACGGCGGCTTCCCTTCGGTATGTTTTCTTCTTCAATCGTTTCTTCAACTTCTTTTCTTACATCGCTATTTCGTCTAACCAAAACTGAGAGCATACTTACGTTTCTTGATTTTTGGCCTTTTATTTCAAGATTTGTTTTATTTTTTGTGTTTATTGTTGTCAATTACTGAAAATAGAGAGTGTAAATTGCATCCGGTGTTTTCTGTGTTCATTTTGTTTGCGTTTAGAACGCATTTTCGTATGCGAATCTGGGAGAAACCTATTGGAAATGATTTTGTTAGTTTTTTATTGCTTAGTTATGTCAATCATTTGAATTTCTTAGTTTTTTACTGAATTACTTTGAGGGTTAGGTATCTGCCATTTTTTTATACCCATGTTGAGGCCATCTTAGAGCGATACAGTACCTGACCTTACAAAATTTGAATGTTTAGGAAATGTATACGAAATTAATTCTCAGATAGTTAGTCACCATGGATTGAAATTGCCGTCTTTTGATTGCTAGGCTACTATGGTGGTTGGGCATTTGCCTTTTTTTTTTGGCAATTAGAAAATTAGAGTTTCGCTCTACTATAATCGGGGTAACCACACCCATCCTTAAATTAGGTACGGGGAGACATCAAAGGAATGGAGACACGGGAAATATCTACAAAGTAATGTTACAAGTGAGTTTTGAATCTGAAACCTTGAAGGGAGCACACTTTCAAAACCCATGCCTTTGACCACCGTGCCACCCCTTAGGGACTTTGCCATTTATTGATATTGATCTTCCTGCTGAGGATCTCTTGATCTCCATGAAATTTTAATTGAGATTGCTATTGTCTGAAATCTGCTTCTGATTTTGTCCTCCAACATTAATTGATCTTGATTTAGGTACAAGGGTGTGGTACTGAAAAGATGCTTCAAGCCCAATCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTTTGCTAATTTGGACTCAAAACTTGTGCTATCTGTTGCCAATGCTAAACAGGAACCTTGTCAAGAATTAAAGAAGTCTTCTTCTAGAGGTGCGGATTTTTACCCTTGCATTTTTCTTTTGGACTGAGACTCTGAACATTTGCATCGTTTACTCCTGCAATGTGCACAAACTTTCTGAAGATGGAGATCTTCCTTTTTTATTACTGCATCTGTGGGATTATACTCTTAAAACCTTGATAGTTGATTAGATATAGGGATGTGTTTACATTGAGAAATCGGTGATCGAACAATCCAAATCCTTAAACCATCATGGAATGACCTAGTGGTTAAGAGTCTCATAACTAACCTGATGGATTCAATCCATGGTGGTGACCTACCTAGAAATAATTTACTATGGATTTTTTTGGCATCCAAATGTTACGGCGTCAGACAGTATGTCTCATGAGAGTAGTCGAGGTGTTCGAGAGCTGGTCCAGACACACACTCGCGGATATCAAAAGAAAATACCATATCCTTGATAGTTGATTAGATATACGCTAGTTGATTAGATATTGCAGGATGCGTTTACATTGGGAAATCGGTGATTGAATAATCCAAATCCGTGCCTGTGCAGTTCATAGTTCATACTGAATAACTGGAGGGGACTTTGGTGGGCTTTTGAAGTCTTCTTGTTGACCAAATTGTTCAGCTTATACTGCATAGTTCTCATTTCTCATGATAATGTAACTATTCTTTTACATTTAGTTGAATGCCAGTATGTGGTTGGAGAAGAACTGATAATGTTGATTCCATACTCAATTCTGAATATTTATGATTTTCAGGAATGCTGATATCACACCTTTCAGCAGCAGCATCTCCACATTTATCTGGGGAGCAAGGCAGTCTATTTCACAAACTTCCACTTTTACCACCGCGGAATTTTGCTTCGAAGAGTCCTCAAGCATTCAGAGACGACTCTTATGGTGTAAAACGCAACTCCGAGGTCACCAAAAAACCAGAATGGTGGTGGAGGACTTTGACTTGTCTTCCATATCTGATGGCCTTGCAGATGTCTAATACAGCACACTATCTACTGCCATTGTTGAAACGCTTGGATGCCAATAGTTTAATCTTTTACATCCCTGGAGCAGTTCAGAGGTTACCATGGTGGTTTCCAATGTTGTACTTCAACCTCGCATACTTCGGAGTCGTGAGGAATAAAGAATGGCCTCATTTCATTCGGCTCCACGTCATGATGGGGATGTTGTTAGAAACGGCGCTTGACATCTTATGGTATGCGAGCAATTTCATGCCACTCATACATTTCAATGGTACATATGCAATGCAATATTGGGCAGCAGTGGGGTTCATCTACATTTCCATCTTGCTGGTGTGTATAAGGAGTTCTCTCTTAGGCACTTATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACGCTTTTCAGTATAGGACGATTTTATCGGCCGTTCTAGACTGCAGCGAGGTATGTTAGATGAGTTAGAGTTTTAGAGGTAGAAAATCAAGAACCAGAGCAGGCTCTTGATCTGATGTTGTGTTTCTGGAATATTATTGTCAGTTTACTTATGTGAGCAAGACTGGG

mRNA sequence

GGCCCCTGTGCCCTCCGCCACCCGACCCTTTTACGCGGAAAACAGAAAAGATGTTTGCGGTGGCTCCGATCAGCGCCCGATCTCACTGCAACTCACCAAATCCGCCCCTTCCGCCGCCGCATACGGCGGCTTCCCTTCGGTACAAGGGTGTGGTACTGAAAAGATGCTTCAAGCCCAATCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTTTGCTAATTTGGACTCAAAACTTGTGCTATCTGTTGCCAATGCTAAACAGGAACCTTGTCAAGAATTAAAGAAGTCTTCTTCTAGAGGAATGCTGATATCACACCTTTCAGCAGCAGCATCTCCACATTTATCTGGGGAGCAAGGCAGTCTATTTCACAAACTTCCACTTTTACCACCGCGGAATTTTGCTTCGAAGAGTCCTCAAGCATTCAGAGACGACTCTTATGGTGTAAAACGCAACTCCGAGGTCACCAAAAAACCAGAATGGTGGTGGAGGACTTTGACTTGTCTTCCATATCTGATGGCCTTGCAGATGTCTAATACAGCACACTATCTACTGCCATTGTTGAAACGCTTGGATGCCAATAGTTTAATCTTTTACATCCCTGGAGCAGTTCAGAGGTTACCATGGTGGTTTCCAATGTTGTACTTCAACCTCGCATACTTCGGAGTCGTGAGGAATAAAGAATGGCCTCATTTCATTCGGCTCCACGTCATGATGGGGATGTTGTTAGAAACGGCGCTTGACATCTTATGGTATGCGAGCAATTTCATGCCACTCATACATTTCAATGGTACATATGCAATGCAATATTGGGCAGCAGTGGGGTTCATCTACATTTCCATCTTGCTGGTGTGTATAAGGAGTTCTCTCTTAGGCACTTATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACGCTTTTCAGTATAGGACGATTTTATCGGCCGTTCTAGACTGCAGCGAGGTATGTTAGATGAGTTAGAGTTTTAGAGGTAGAAAATCAAGAACCAGAGCAGGCTCTTGATCTGATGTTGTGTTTCTGGAATATTATTGTCAGTTTACTTATGTGAGCAAGACTGGG

Coding sequence (CDS)

ATGTTTGCGGTGGCTCCGATCAGCGCCCGATCTCACTGCAACTCACCAAATCCGCCCCTTCCGCCGCCGCATACGGCGGCTTCCCTTCGGTACAAGGGTGTGGTACTGAAAAGATGCTTCAAGCCCAATCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTTTGCTAATTTGGACTCAAAACTTGTGCTATCTGTTGCCAATGCTAAACAGGAACCTTGTCAAGAATTAAAGAAGTCTTCTTCTAGAGGAATGCTGATATCACACCTTTCAGCAGCAGCATCTCCACATTTATCTGGGGAGCAAGGCAGTCTATTTCACAAACTTCCACTTTTACCACCGCGGAATTTTGCTTCGAAGAGTCCTCAAGCATTCAGAGACGACTCTTATGGTGTAAAACGCAACTCCGAGGTCACCAAAAAACCAGAATGGTGGTGGAGGACTTTGACTTGTCTTCCATATCTGATGGCCTTGCAGATGTCTAATACAGCACACTATCTACTGCCATTGTTGAAACGCTTGGATGCCAATAGTTTAATCTTTTACATCCCTGGAGCAGTTCAGAGGTTACCATGGTGGTTTCCAATGTTGTACTTCAACCTCGCATACTTCGGAGTCGTGAGGAATAAAGAATGGCCTCATTTCATTCGGCTCCACGTCATGATGGGGATGTTGTTAGAAACGGCGCTTGACATCTTATGGTATGCGAGCAATTTCATGCCACTCATACATTTCAATGGTACATATGCAATGCAATATTGGGCAGCAGTGGGGTTCATCTACATTTCCATCTTGCTGGTGTGTATAAGGAGTTCTCTCTTAGGCACTTATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACGCTTTTCAGTATAGGACGATTTTATCGGCCGTTCTAG

Protein sequence

MFAVAPISARSHCNSPNPPLPPPHTAASLRYKGVVLKRCFKPNQVVMPQCRRLGFANLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPRNFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLDANSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWYASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSIGRFYRPF

Homology

[Close]

BLAST of Sed0000841 vs. NCBI nr
Match: XP_038888476.1 (protein TIC 20-IV, chloroplastic [Benincasa hispida])

HSP 1 Score: 514.6 bits (1324), Expect = 5.7e-142
Identity = 251/306 (82.03%), Postives = 274/306 (89.54%), Query Frame = 0


Query: 1   MFAVAPISARSHCNSPNPPLPPPHTA----ASLRYKGVVLKRCFKPNQVVMPQCRRLGFA 60
           MFAV P +AR HCNSPNP LPPP TA    AS+RYK V LKRCFKP+QVV+PQC R G +
Sbjct: 28  MFAVGPSNARLHCNSPNPLLPPPATATATGASVRYKDVFLKRCFKPSQVVIPQCHRFGSS 87

Query: 61  NLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPRN 120
           NLD+KLVLS+ N KQEP +ELK SSS+G+LIS LSAAASPHLSGEQGSLFHKLPLLPPRN
Sbjct: 88  NLDTKLVLSITNTKQEPYKELKCSSSKGILISQLSAAASPHLSGEQGSLFHKLPLLPPRN 147

Query: 121 FASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLDA 180
            A KSPQAFRDDSY VKR+S VT+KPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ LD 
Sbjct: 148 CAGKSPQAFRDDSYSVKRHSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDV 207

Query: 181 NSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWYA 240
           ++LIFYIPG VQ+LPWWFPMLYFNLAYFGVVRNKE PHFIR HVMMGMLLET LDI+WY+
Sbjct: 208 DNLIFYIPGFVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETLLDIVWYS 267

Query: 241 SNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSIG 300
           SNFMPLIH+NGTYAMQYWAAVGFIYIS LLVCIRSSLLGTYAKIPFIFENALIHT FSIG
Sbjct: 268 SNFMPLIHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFSIG 327

Query: 301 RFYRPF 303
           R+YRPF
Sbjct: 328 RYYRPF 333

[Close]

BLAST of Sed0000841 vs. NCBI nr
Match: XP_023554543.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 494.6 bits (1272), Expect = 6.1e-136
Identity = 245/307 (79.80%), Postives = 270/307 (87.95%), Query Frame = 0


Query: 1   MFAVAPIS-ARSHCNSPNPPLPPP----HTAASLRYKGVVLKRCFKPNQVVMPQCRRLGF 60
           MFAVAP S AR  CNSPNP L  P     TA+S+RY+ VVLK CFKP+QVV+PQCRRL  
Sbjct: 28  MFAVAPSSGARLRCNSPNPLLAMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87

Query: 61  ANLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPR 120
           ANL + LVLS++N KQEPC+ELK SSSRGML+SHLSAAASP L GEQGSLFHKLPLLPPR
Sbjct: 88  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLMSHLSAAASPTLGGEQGSLFHKLPLLPPR 147

Query: 121 NFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLD 180
            +A KSPQAFRDDSYGVKR+S VTKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 ANSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWY 240
            ++LIFY+PGAVQ LPWWFPMLYFNLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSI 300
            SNFMPLIH+NGTY+MQYWAAVGFIYISIL +CIRSSLLGTYAKIPFI ENALIHT FS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327

Query: 301 GRFYRPF 303
           GR++RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Sed0000841 vs. NCBI nr
Match: XP_022969165.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 490.0 bits (1260), Expect = 1.5e-134
Identity = 242/307 (78.83%), Postives = 268/307 (87.30%), Query Frame = 0


Query: 1   MFAVAP-ISARSHCNSPNPPLPPP----HTAASLRYKGVVLKRCFKPNQVVMPQCRRLGF 60
           MFAVAP  SAR  CNSPNP L  P     TA+S+RY+ VVLK CFKP+QVV+PQCRRLG 
Sbjct: 28  MFAVAPSSSARLRCNSPNPLLSMPATMMATASSVRYRDVVLKGCFKPSQVVVPQCRRLGC 87

Query: 61  ANLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPR 120
           ANL   LVL ++N KQEPC+ELK SSSRGM+ISHLSAAASP L GEQGSLFHKLPLLPPR
Sbjct: 88  ANLGPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLD 180
            +A KSPQAFRDDSYGVKR+S +TKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 ANSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWY 240
            ++LIFY+PGAVQ LPWWFPMLY NLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSI 300
            SNFMPLIH+NGTY+MQYWAAVGFIYISIL +CIRSSL+GTYAKIPFI ENALIHT FS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFST 327

Query: 301 GRFYRPF 303
           GR++RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Sed0000841 vs. NCBI nr
Match: KAG7011953.1 (Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 489.2 bits (1258), Expect = 2.6e-134
Identity = 242/307 (78.83%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAVAPIS-ARSHCNSPNPPLPPP----HTAASLRYKGVVLKRCFKPNQVVMPQCRRLGF 60
           MFAVAP S AR  CNSPNP L  P     TA+S+RY+ V+LK CFKP+QVV+PQCRRLG 
Sbjct: 47  MFAVAPSSGARLRCNSPNPLLSTPAKTMATASSVRYRDVILKGCFKPSQVVVPQCRRLGC 106

Query: 61  ANLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPR 120
           ANL + LVLS++N KQEPC+ELK SSS GMLISHLSAAASP L GEQGSLFHKLPLLPPR
Sbjct: 107 ANLGTNLVLSISNTKQEPCKELKFSSSGGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 166

Query: 121 NFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLD 180
            +A KSPQAFRDDSY VKR+S VTKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+
Sbjct: 167 KYAGKSPQAFRDDSYSVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 226

Query: 181 ANSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWY 240
            ++LIFY+PGAVQ LPWWFP LYFNLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY
Sbjct: 227 VDNLIFYVPGAVQNLPWWFPTLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 286

Query: 241 ASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSI 300
            SNFMPLIH+NGTY+MQYWAAVGFIYISIL +CIR SLLGTYAKIPFI ENALIHT FS 
Sbjct: 287 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRRSLLGTYAKIPFISENALIHTFFST 346

Query: 301 GRFYRPF 303
           GR++RPF
Sbjct: 347 GRYFRPF 353

[Close]

BLAST of Sed0000841 vs. NCBI nr
Match: KAG6572342.1 (Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 489.2 bits (1258), Expect = 2.6e-134
Identity = 242/307 (78.83%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAVAPIS-ARSHCNSPNPPLPPP----HTAASLRYKGVVLKRCFKPNQVVMPQCRRLGF 60
           MFAVAP S AR  CNSPNP L  P     TA+S+RY+ V+LK CFKP+QVV+PQCRRLG 
Sbjct: 1   MFAVAPSSGARLRCNSPNPLLSTPATTMATASSVRYRDVILKGCFKPSQVVVPQCRRLGC 60

Query: 61  ANLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPR 120
           ANL + LVLS++N KQEPC+ELK SSS GMLISHLSAAASP L GEQGSLFHKLPLLPPR
Sbjct: 61  ANLGTNLVLSISNTKQEPCKELKFSSSGGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 120

Query: 121 NFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLD 180
            +A KSPQAFRDDSY VKR+S VTKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+
Sbjct: 121 KYAGKSPQAFRDDSYSVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 180

Query: 181 ANSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWY 240
            ++LIFY+PGAVQ LPWWFP LYFNLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY
Sbjct: 181 VDNLIFYVPGAVQNLPWWFPTLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 240

Query: 241 ASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSI 300
            SNFMPLIH+NGTY+MQYWAAVGFIYISIL +CIR SLLGTYAKIPFI ENALIHT FS 
Sbjct: 241 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRRSLLGTYAKIPFISENALIHTFFST 300

Query: 301 GRFYRPF 303
           GR++RPF
Sbjct: 301 GRYFRPF 307

[Close]

BLAST of Sed0000841 vs. ExPASy Swiss-Prot
Match: Q9ZQZ9 (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.6e-54
Identity = 114/259 (44.02%), Postives = 162/259 (62.55%), Query Frame = 0


Query: 52  RLGFANLDS--KLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGE------QG 111
           R+ F N+DS  KL LS ++  +   +E+   S+   +    +A +S  L          G
Sbjct: 33  RVFFPNVDSSAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQLFANGLPPLAPG 92

Query: 112 SLFHKLPLLPPRNFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNT 171
              H+ P+ P R          +DD + +K   ++ ++PEWWWRTL C+PYL++LQ+S+ 
Sbjct: 93  LRRHRRPIEPAR--------VAKDDFFKIKL-PKIAERPEWWWRTLACVPYLISLQISDV 152

Query: 172 AHYLLPLLKRLDA-NSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMM 231
             Y+ P L++ DA   +I++IPGA+ R P WF M+Y  L Y  VV+NKE PH++R H+MM
Sbjct: 153 GFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMM 212

Query: 232 GMLLETALDILWYASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPF 291
           GMLLETAL ++W  SNF PLIHF G + M YW A+GF YI +LL CIR +L G YA+IPF
Sbjct: 213 GMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPF 272

Query: 292 IFENALIHTLFSIGRFYRP 302
           + + A IHTLF++G F RP
Sbjct: 273 MTDAASIHTLFNLGGFQRP 282

[Close]

BLAST of Sed0000841 vs. ExPASy Swiss-Prot
Match: Q8GZ79 (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 8.0e-46
Identity = 106/221 (47.96%), Postives = 139/221 (62.90%), Query Frame = 0


Query: 73  PCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPRNFASKSPQAFRDDSYGV 132
           P  EL +  SRG+ +S+LSA++S  L+GEQGSL   LP+LP R     +P+A +D     
Sbjct: 53  PFNELPR-VSRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF 112

Query: 133 KRNSEVTKKPEWWWRTLTCLPYLMAL----QMSNTAHYLLPLLKRLDANSLIFYIPGAVQ 192
            R   +TKKP+WWWRTL CLPYLM L      + TA++L P L+  D   L +   GA+ 
Sbjct: 113 -RFPPMTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIG 172

Query: 193 RLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWYASNFMPLIHFNGT 252
           RLP WF M YF +AY G+VR KEWPHF R HV+MGMLLE AL ++   S +MPL  + G 
Sbjct: 173 RLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGK 232

Query: 253 YAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALI 290
           + M +W AV F Y+  +L  IR +L G YA IPF+ + A I
Sbjct: 233 FGMHFWTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of Sed0000841 vs. ExPASy Swiss-Prot
Match: Q9ZST8 (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.8e-36
Identity = 83/215 (38.60%), Postives = 124/215 (57.67%), Query Frame = 0


Query: 79  KSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPRNFASKSPQAFRDDSYGVKRNSEV 138
           ++  RGM  + +SA +S  LSG Q  L   +P+LP  + +S +P+A +D S    R   +
Sbjct: 38  ENKPRGMTFTDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTPRATKDSS--GFRFPPM 97

Query: 139 TKKPEWWWRTLTCLPYLM----ALQMSNTAHYLLPLLKRLDANSLIFYIPGAVQRLPWWF 198
           TKKP WWWRTL+C+PYL+    A   + TA++L P +      +  F +  A+  LP W 
Sbjct: 98  TKKPRWWWRTLSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTYPFLM--AIGTLPRWS 157

Query: 199 PMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWYASNFMPLIHFNGTYAMQYW 258
            + YF +AY  +VR KEWPHF R HV +GML+E AL +    S +MP   + G   M +W
Sbjct: 158 LIAYFLIAYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRSFYWGKLGMHFW 217

Query: 259 AAVGFIYISILLVCIRSSLLGTYAKIPFIFENALI 290
               F+++   + CIR +L+G YA +PF+ + A I
Sbjct: 218 TTAFFVFLFTTIECIRCALVGMYADVPFVCDAAYI 248

[Close]

BLAST of Sed0000841 vs. ExPASy TrEMBL
Match: A0A6J1HZ71 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 7.3e-135
Identity = 242/307 (78.83%), Postives = 268/307 (87.30%), Query Frame = 0


Query: 1   MFAVAP-ISARSHCNSPNPPLPPP----HTAASLRYKGVVLKRCFKPNQVVMPQCRRLGF 60
           MFAVAP  SAR  CNSPNP L  P     TA+S+RY+ VVLK CFKP+QVV+PQCRRLG 
Sbjct: 28  MFAVAPSSSARLRCNSPNPLLSMPATMMATASSVRYRDVVLKGCFKPSQVVVPQCRRLGC 87

Query: 61  ANLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPR 120
           ANL   LVL ++N KQEPC+ELK SSSRGM+ISHLSAAASP L GEQGSLFHKLPLLPPR
Sbjct: 88  ANLGPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLD 180
            +A KSPQAFRDDSYGVKR+S +TKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 ANSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWY 240
            ++LIFY+PGAVQ LPWWFPMLY NLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSI 300
            SNFMPLIH+NGTY+MQYWAAVGFIYISIL +CIRSSL+GTYAKIPFI ENALIHT FS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFST 327

Query: 301 GRFYRPF 303
           GR++RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Sed0000841 vs. ExPASy TrEMBL
Match: A0A6J1GL44 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.6e-134
Identity = 243/307 (79.15%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAVAPIS-ARSHCNSPNPPLPPP----HTAASLRYKGVVLKRCFKPNQVVMPQCRRLGF 60
           M AVAP S AR  CNS NP L  P     TA+S+RY+ VVLK CFKP+QVV+PQCRRL  
Sbjct: 28  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87

Query: 61  ANLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPR 120
           ANL + LVLS++N KQEPC+ELK SSSRGMLISHLSAAASP L GEQGSLFHKLPLLPPR
Sbjct: 88  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLD 180
            +A KSPQ FRDDSYGVKR+S VTKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 ANSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWY 240
            ++LIFY+PGAVQ LPWWFPMLYFNLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSI 300
            SNFMPLIH+NGTY+MQYWAAVGFIYISIL +CIRSSLLGTYAKIPFI ENALIHT FS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327

Query: 301 GRFYRPF 303
           GR++RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Sed0000841 vs. ExPASy TrEMBL
Match: A0A6J1GMA4 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.6e-134
Identity = 243/307 (79.15%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAVAPIS-ARSHCNSPNPPLPPP----HTAASLRYKGVVLKRCFKPNQVVMPQCRRLGF 60
           M AVAP S AR  CNS NP L  P     TA+S+RY+ VVLK CFKP+QVV+PQCRRL  
Sbjct: 13  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 72

Query: 61  ANLDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPR 120
           ANL + LVLS++N KQEPC+ELK SSSRGMLISHLSAAASP L GEQGSLFHKLPLLPPR
Sbjct: 73  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 132

Query: 121 NFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLD 180
            +A KSPQ FRDDSYGVKR+S VTKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+
Sbjct: 133 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 192

Query: 181 ANSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWY 240
            ++LIFY+PGAVQ LPWWFPMLYFNLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY
Sbjct: 193 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 252

Query: 241 ASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSI 300
            SNFMPLIH+NGTY+MQYWAAVGFIYISIL +CIRSSLLGTYAKIPFI ENALIHT FS 
Sbjct: 253 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 312

Query: 301 GRFYRPF 303
           GR++RPF
Sbjct: 313 GRYFRPF 319

[Close]

BLAST of Sed0000841 vs. ExPASy TrEMBL
Match: A0A6J1HX02 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.2e-132
Identity = 239/305 (78.36%), Postives = 264/305 (86.56%), Query Frame = 0


Query: 1   MFAVAP-ISARSHCNSPNPPLPPPHT--AASLRYKGVVLKRCFKPNQVVMPQCRRLGFAN 60
           MFAVAP  SAR  CNSPNP L  P T  A +   + VVLK CFKP+QVV+PQCRRLG AN
Sbjct: 28  MFAVAPSSSARLRCNSPNPLLSMPATMMATASSVRDVVLKGCFKPSQVVVPQCRRLGCAN 87

Query: 61  LDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPRNF 120
           L   LVL ++N KQEPC+ELK SSSRGM+ISHLSAAASP L GEQGSLFHKLPLLPPR +
Sbjct: 88  LGPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPRKY 147

Query: 121 ASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLDAN 180
           A KSPQAFRDDSYGVKR+S +TKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+ +
Sbjct: 148 ARKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLNVD 207

Query: 181 SLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWYAS 240
           +LIFY+PGAVQ LPWWFPMLY NLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY S
Sbjct: 208 NLIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWYTS 267

Query: 241 NFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSIGR 300
           NFMPLIH+NGTY+MQYWAAVGFIYISIL +CIRSSL+GTYAKIPFI ENALIHT FS GR
Sbjct: 268 NFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFSTGR 327

Query: 301 FYRPF 303
           ++RPF
Sbjct: 328 YFRPF 332

[Close]

BLAST of Sed0000841 vs. ExPASy TrEMBL
Match: A0A6J1GM78 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.6e-132
Identity = 240/305 (78.69%), Postives = 263/305 (86.23%), Query Frame = 0


Query: 1   MFAVAPIS-ARSHCNSPNPPLPPPHT--AASLRYKGVVLKRCFKPNQVVMPQCRRLGFAN 60
           M AVAP S AR  CNS NP L  P T  A +   + VVLK CFKP+QVV+PQCRRL  AN
Sbjct: 28  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRDVVLKGCFKPSQVVVPQCRRLDCAN 87

Query: 61  LDSKLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPRNF 120
           L + LVLS++N KQEPC+ELK SSSRGMLISHLSAAASP L GEQGSLFHKLPLLPPR +
Sbjct: 88  LGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPRKY 147

Query: 121 ASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNTAHYLLPLLKRLDAN 180
           A KSPQ FRDDSYGVKR+S VTKKPEWWWRTL C+PYLMALQMS+TA+YLLPLL+ L+ +
Sbjct: 148 AGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLNVD 207

Query: 181 SLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWYAS 240
           +LIFY+PGAVQ LPWWFPMLYFNLAYFGVVRNKE PHFIR HVMMGMLL TALDILWY S
Sbjct: 208 NLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWYTS 267

Query: 241 NFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTLFSIGR 300
           NFMPLIH+NGTY+MQYWAAVGFIYISIL +CIRSSLLGTYAKIPFI ENALIHT FS GR
Sbjct: 268 NFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFSTGR 327

Query: 301 FYRPF 303
           ++RPF
Sbjct: 328 YFRPF 332

[Close]

BLAST of Sed0000841 vs. TAIR 10
Match: AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV )

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-55
Identity = 114/259 (44.02%), Postives = 162/259 (62.55%), Query Frame = 0


Query: 52  RLGFANLDS--KLVLSVANAKQEPCQELKKSSSRGMLISHLSAAASPHLSGE------QG 111
           R+ F N+DS  KL LS ++  +   +E+   S+   +    +A +S  L          G
Sbjct: 33  RVFFPNVDSSAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQLFANGLPPLAPG 92

Query: 112 SLFHKLPLLPPRNFASKSPQAFRDDSYGVKRNSEVTKKPEWWWRTLTCLPYLMALQMSNT 171
              H+ P+ P R          +DD + +K   ++ ++PEWWWRTL C+PYL++LQ+S+ 
Sbjct: 93  LRRHRRPIEPAR--------VAKDDFFKIKL-PKIAERPEWWWRTLACVPYLISLQISDV 152

Query: 172 AHYLLPLLKRLDA-NSLIFYIPGAVQRLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMM 231
             Y+ P L++ DA   +I++IPGA+ R P WF M+Y  L Y  VV+NKE PH++R H+MM
Sbjct: 153 GFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMM 212

Query: 232 GMLLETALDILWYASNFMPLIHFNGTYAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPF 291
           GMLLETAL ++W  SNF PLIHF G + M YW A+GF YI +LL CIR +L G YA+IPF
Sbjct: 213 GMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPF 272

Query: 292 IFENALIHTLFSIGRFYRP 302
           + + A IHTLF++G F RP
Sbjct: 273 MTDAASIHTLFNLGGFQRP 282

[Close]

BLAST of Sed0000841 vs. TAIR 10
Match: AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20 )

HSP 1 Score: 185.7 bits (470), Expect = 5.7e-47
Identity = 106/221 (47.96%), Postives = 139/221 (62.90%), Query Frame = 0


Query: 73  PCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPRNFASKSPQAFRDDSYGV 132
           P  EL +  SRG+ +S+LSA++S  L+GEQGSL   LP+LP R     +P+A +D     
Sbjct: 53  PFNELPR-VSRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF 112

Query: 133 KRNSEVTKKPEWWWRTLTCLPYLMAL----QMSNTAHYLLPLLKRLDANSLIFYIPGAVQ 192
            R   +TKKP+WWWRTL CLPYLM L      + TA++L P L+  D   L +   GA+ 
Sbjct: 113 -RFPPMTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIG 172

Query: 193 RLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWYASNFMPLIHFNGT 252
           RLP WF M YF +AY G+VR KEWPHF R HV+MGMLLE AL ++   S +MPL  + G 
Sbjct: 173 RLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGK 232

Query: 253 YAMQYWAAVGFIYISILLVCIRSSLLGTYAKIPFIFENALI 290
           + M +W AV F Y+  +L  IR +L G YA IPF+ + A I
Sbjct: 233 FGMHFWTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of Sed0000841 vs. TAIR 10
Match: AT1G04945.3 (HIT-type Zinc finger family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42
Identity = 98/205 (47.80%), Postives = 129/205 (62.93%), Query Frame = 0


Query: 73  PCQELKKSSSRGMLISHLSAAASPHLSGEQGSLFHKLPLLPPRNFASKSPQAFRDDSYGV 132
           P  EL +  SRG+ +S+LSA++S  L+GEQGSL   LP+LP R     +P+A +D     
Sbjct: 53  PFNELPR-VSRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF 112

Query: 133 KRNSEVTKKPEWWWRTLTCLPYLMAL----QMSNTAHYLLPLLKRLDANSLIFYIPGAVQ 192
            R   +TKKP+WWWRTL CLPYLM L      + TA++L P L+  D   L +   GA+ 
Sbjct: 113 -RFPPMTKKPQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIG 172

Query: 193 RLPWWFPMLYFNLAYFGVVRNKEWPHFIRLHVMMGMLLETALDILWYASNFMPLIHFNGT 252
           RLP WF M YF +AY G+VR KEWPHF R HV+MGMLLE AL ++   S +MPL  + G 
Sbjct: 173 RLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGK 232

Query: 253 YAMQYWAAVGFIYISILLVCIRSSL 274
           + M +W AV F Y+  +L  IR +L
Sbjct: 233 FGMHFWTAVAFAYLFTVLESIRCAL 253

The following BLAST results are available for this feature:

BLAST of Sed0000841 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888476.1	5.7e-142	82.03	protein TIC 20-IV, chloroplastic [Benincasa hispida]	[more]
XP_023554543.1	6.1e-136	79.80	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022969165.1	1.5e-134	78.83	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita maxima]	[more]
KAG7011953.1	2.6e-134	78.83	Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6572342.1	2.6e-134	78.83	Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Sed0000841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQZ9	1.6e-54	44.02	Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=...	[more]
Q8GZ79	8.0e-46	47.96	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ...	[more]
Q9ZST8	9.8e-36	38.60	Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1	[more]

BLAST of Sed0000841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZ71	7.3e-135	78.83	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1	[more]
A0A6J1GL44	1.6e-134	79.15	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]
A0A6J1GMA4	1.6e-134	79.15	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]
A0A6J1HX02	1.2e-132	78.36	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1	[more]
A0A6J1GM78	2.6e-132	78.69	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]

BLAST of Sed0000841 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03320.1	1.1e-55	44.02	translocon at the inner envelope membrane of chloroplasts 20-IV	[more]
AT1G04940.1	5.7e-47	47.96	translocon at the inner envelope membrane of chloroplasts 20	[more]
AT1G04945.3	1.4e-42	47.80	HIT-type Zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005691	Chloroplast protein import component Tic20	PFAM	PF16166	TIC20	coord: 123..287 e-value: 1.0E-59 score: 201.4
IPR005691	Chloroplast protein import component Tic20	PANTHER	PTHR33510	PROTEIN TIC 20-II, CHLOROPLASTIC	coord: 52..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR33510:SF12	PROTEIN TIC 20-IV, CHLOROPLASTIC	coord: 52..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000841.1	Sed0000841.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion