Sed0000721 (gene) Chayote v1

Overview


Name	Sed0000721
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG01: 27323635 .. 27324454 (-)
RNA-Seq Expression	Sed0000721
Synteny	Sed0000721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGAAGAAGAAGAAGCCTAGAGTTCCAATAAAAGAAGCTCAAAAAGAAATCGAGGCTGCGGAAAAGGATAAAGAATTAGACGGTGATGACAGTCGTAGTAAGAAAGAAGAATTCGACCCATGCAGGTGAGACCTCATCACTGCCCGTGGCGAAAAAAAGTTGTCGTGAGCCTTGACATTATGCGAGCAAAGAAGGGTAAAAAGAATCTGCCTGAAGAAGAAACAAAATATCTCGGAGAAGAAAGATAACCAAGAGGAGGAGGAGGAAGAGGAAATGAACTATGAACAATCGGAGGATGAGAGGATGGAAGTTGTGAAAAATTATAGTAGGAGCAAGAAGAAGATGATTGAATAAAAATGGGTTATTGAGAGCTGAAGTGGAAGCTGAGTAGAAAGAGTCCAAAAATGCTAAGGACCATGTTGTAGCAAGCCAAGTGGAGAAAGAAATGGATGAAGTAGAAGAGGAAGAAGAAATTGAGGAAAGTGAATCCGAGACAGAAGAGCTTGTTATTGAGAAGAACTTAGTGGAGCCTGTATTGCCGTAAAAGAAGAAATTTGATAAAAGAAAAGTTCCTGACACCAATCTTGTGATTGTGGATCCATTGATGCTGCAAAAAAAGAAAAGCAAAGGGAAGTATGTGGTTAGTTCATAGGAGGATGAGGATACAAGATTGGTTGTAGGTTGGGAGGAAATTAGGAAACGAATGGAGGAATTGAGAAAGAATCCATTTTTATTAGAACAAGGGGCTCAACTTGGAGTCGAGCAAGTTGCCAAGATGAGTCAAGAAGGAAATAGAGAAGCGGAACTGGCATAA

mRNA sequence

ATGGCTATGAAGAAGAAGAAGCCTAGAGTTCCAATAAAAGAAGCTCAAAAAGAAATCGAGGCTGCGGAAAAGGATAAAGAATTAGACGGTGATGACAGTCGTAGTAAGAAAGAAGAATTCGACCCATGCAGAAGGGTAAAAAGAATCTGCCTGAAGAAGAAACAAAATATCTCGGAGAAGAAAGATAACCAAGAGGAGGAGGAGGAAGAGGAAATGAACTATGAACAATCGGAGGATGAGAGGATGGAAGTTGTGAAAAATTATACAAGCCAAGTGGAGAAAGAAATGGATGAAGTAGAAGAGGAAGAAGAAATTGAGGAAAGTGAATCCGAGACAGAAGAGCTTGTTATTGAGAAGAACTTAGTGGAGCCTGAGGATGAGGATACAAGATTGGTTGTAGGTTGGGAGGAAATTAGGAAACGAATGGAGGAATTGAGAAAGAATCCATTTTTATTAGAACAAGGGGCTCAACTTGGAGTCGAGCAAGTTGCCAAGATGAGTCAAGAAGGAAATAGAGAAGCGGAACTGGCATAA

Coding sequence (CDS)

ATGGCTATGAAGAAGAAGAAGCCTAGAGTTCCAATAAAAGAAGCTCAAAAAGAAATCGAGGCTGCGGAAAAGGATAAAGAATTAGACGGTGATGACAGTCGTAGTAAGAAAGAAGAATTCGACCCATGCAGAAGGGTAAAAAGAATCTGCCTGAAGAAGAAACAAAATATCTCGGAGAAGAAAGATAACCAAGAGGAGGAGGAGGAAGAGGAAATGAACTATGAACAATCGGAGGATGAGAGGATGGAAGTTGTGAAAAATTATACAAGCCAAGTGGAGAAAGAAATGGATGAAGTAGAAGAGGAAGAAGAAATTGAGGAAAGTGAATCCGAGACAGAAGAGCTTGTTATTGAGAAGAACTTAGTGGAGCCTGAGGATGAGGATACAAGATTGGTTGTAGGTTGGGAGGAAATTAGGAAACGAATGGAGGAATTGAGAAAGAATCCATTTTTATTAGAACAAGGGGCTCAACTTGGAGTCGAGCAAGTTGCCAAGATGAGTCAAGAAGGAAATAGAGAAGCGGAACTGGCATAA

Protein sequence

MAMKKKKPRVPIKEAQKEIEAAEKDKELDGDDSRSKKEEFDPCRRVKRICLKKKQNISEKKDNQEEEEEEEMNYEQSEDERMEVVKNYTSQVEKEMDEVEEEEEIEESESETEELVIEKNLVEPEDEDTRLVVGWEEIRKRMEELRKNPFLLEQGAQLGVEQVAKMSQEGNREAELA

Homology

The following BLAST results are available for this feature:

BLAST of Sed0000721 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0000721 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0000721 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0000721 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..118
None	No IPR available	COILS	Coil	Coil	coord: 50..80
None	No IPR available	COILS	Coil	Coil	coord: 12..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000721.1	Sed0000721.1	mRNA