Sed0000675 (gene) Chayote v1

Overview


Name	Sed0000675
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein cornichon homolog 4-like
Location	LG01: 68732838 .. 68734873 (-)
RNA-Seq Expression	Sed0000675
Synteny	Sed0000675

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAGAAAAAAGAAAAGAGGGTTCTGCCGTGGGGTTGTAAAATTCCGATCGTCGAGATGCGATAAGTCGTTTGCGCGTAGGGATTCGTCTCATCGGCGTTTAGTTTGCACATTCCTTCTTCAACCCATTTCCGGCACCGTATGATCGGAGACGACGCCGCCGCAGCCATTGAAGTCGATTTCAAATCACACACACGACAGAGAGACGTCGGAGTCGGAGTCGGAGTGGGTTCAGGACATTACGATGGGTGATATCTATGTCTGGCTTCTCTCCTTCTTCTTTATCATCGCCCTTCTCATACTCCTCGTCTTCCAGGTTCTCTCTCTCTAAACCCTAGATTTTTCTAATTAAGGGGGCATTCCATTGCTATCTTGAATTCCCCTTTCTAAATATAATTGCTTGTTGCTATGTTGCAACTCTTATGAACCTGTTTGATAGATTCTTAGACAACAACTTTTGTTGCAGCTTATGTGCTTGGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATCAACAAAGTGGTTGTGCCTGAGTTCATCGCCCAAGGACTCTTGTGCTTCTTCTATCTCCTAACAGGCCATTGGGTTATGTCACTCTTTTGTGTGCCCTACCTTTATTACAATTTGACACTGTAAGTTTCCTCTCATTCATTCTTGCATCTTTCATCCACTGTTTCCTAAATTCAGCTGTATGGCAAGCTTGCTAAGCACTTGGTAGCCAAGGGTTGAGTGGATGGCAGGGGAAAGCATCTAAGTAAGTCCTAGTCCCCAAGGGTGGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAAGGTATGCTCCCTTTAAGGTCCTAAGTTTGAGACTCACCATGACATTACTCTTTCGATGTCTGCCGGTGCTTGGCCTAAGGACGGGCGTGGTTACTCTTGTTTCAAAAAAAAAAAAAAAAAGTAAGTCGTAAACTCTAAAGCCGTTTTCTTAGAATGTATGAATTGTTTCACATTACCAATATTCTCTTCTGAGATTTTGAATGATATCACTAGGTTTCATATAAGTTAAAGCTTTTGAGATGGCTCAGAATCTAAGTAGTCTCATGGTTAGTCTTTTTGGAGATTCACTCTACAATAGACTTATTTAAGTGGATATCATTTAAGATAAGCCAAACCGATCAAACTGATATCTAGCATATTTAAGATTCAGTTGGTGAGCATACGGCTCAGCATTATTTTTATATCCATGAATGTTTGTGTCAGTTTACGCACACCGCTGGCGCGACTATTCTTATGGGACATATCGTCTGACCTTACAACAATTAGATGTCAAGAAAACTCGTAGGAAATTAATTCTTAGGTAGGTGGCATCTTCATCACCTTTTAGTTACTTAAGACCATCTTAACCACTTGGTCATTCTATGATAGTTGGCTCAATGCTTGGTTTGCTTGTTTGCTGATAATTCATGCCAAGCTTCTTGATCCATCTGATGTGTGTTTTCCTCATGAATAGGTACACTCAACGAAAGCATCTGGTGGATGTTACTGAGATATTCAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTCGTCTATCTTGTTGCTCTCCTCTTTCTCTCTATATTTTGGTAATCCAATAGTCGAGAGTGTTTTCTCATTAACAATCGTACTGTTATCACCATTTATTCAAACTATTAAGATCCGCGCTCCGCCCTCTTCGAATCTCTGTTTTGCAGGTTGATTTACAGTGCGTTGGAGGACCATGATTCTTGAATAGGAGTAGCTGCAAACTGTTGTCTTGTAGGAGATAATGCCCCTAAGCTTGGTGTACTTACTCCTAGGGTACCTTGTTCTGGACAAATAATTGCCTTGTGAGTAAGGTCTAAAGGCTTTTTCTTAATTGCCACTAAATGCTGCCCCTGTTTTTTTCACTTCTGTTTATATATATACAAAAAAAAAAAAAACTATATTTATGTGATTCTTATTATGTTTATAGAAAGCATTTATGCACAATTTAAGTGAAAACAAGTTATTTAGGC

mRNA sequence

AAAAAAAAGAAAAAAGAAAAGAGGGTTCTGCCGTGGGGTTGTAAAATTCCGATCGTCGAGATGCGATAAGTCGTTTGCGCGTAGGGATTCGTCTCATCGGCGTTTAGTTTGCACATTCCTTCTTCAACCCATTTCCGGCACCGTATGATCGGAGACGACGCCGCCGCAGCCATTGAAGTCGATTTCAAATCACACACACGACAGAGAGACGTCGGAGTCGGAGTCGGAGTGGGTTCAGGACATTACGATGGGTGATATCTATGTCTGGCTTCTCTCCTTCTTCTTTATCATCGCCCTTCTCATACTCCTCGTCTTCCAGCTTATGTGCTTGGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATCAACAAAGTGGTTGTGCCTGAGTTCATCGCCCAAGGACTCTTGTGCTTCTTCTATCTCCTAACAGGCCATTGGGTTATGTCACTCTTTTGTGTGCCCTACCTTTATTACAATTTGACACTGTACACTCAACGAAAGCATCTGGTGGATGTTACTGAGATATTCAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTCGTCTATCTTGTTGCTCTCCTCTTTCTCTCTATATTTTGGTTGATTTACAGTGCGTTGGAGGACCATGATTCTTGAATAGGAGTAGCTGCAAACTGTTGTCTTGTAGGAGATAATGCCCCTAAGCTTGGTGTACTTACTCCTAGGGTACCTTGTTCTGGACAAATAATTGCCTTGTGAGTAAGGTCTAAAGGCTTTTTCTTAATTGCCACTAAATGCTGCCCCTGTTTTTTTCACTTCTGTTTATATATATACAAAAAAAAAAAAAACTATATTTATGTGATTCTTATTATGTTTATAGAAAGCATTTATGCACAATTTAAGTGAAAACAAGTTATTTAGGC

Coding sequence (CDS)

ATGGGTGATATCTATGTCTGGCTTCTCTCCTTCTTCTTTATCATCGCCCTTCTCATACTCCTCGTCTTCCAGCTTATGTGCTTGGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATCAACAAAGTGGTTGTGCCTGAGTTCATCGCCCAAGGACTCTTGTGCTTCTTCTATCTCCTAACAGGCCATTGGGTTATGTCACTCTTTTGTGTGCCCTACCTTTATTACAATTTGACACTGTACACTCAACGAAAGCATCTGGTGGATGTTACTGAGATATTCAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTCGTCTATCTTGTTGCTCTCCTCTTTCTCTCTATATTTTGGTTGATTTACAGTGCGTTGGAGGACCATGATTCTTGA

Protein sequence

MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLCFFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALLFLSIFWLIYSALEDHDS

Homology

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BLAST of Sed0000675 vs. NCBI nr
Match: XP_023532889.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6606147.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.6 bits (649), Expect = 4.8e-64
Identity = 126/137 (91.97%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFFFIIALLIL+VFQLMCLADLEFDYINPYDSSSRINKVVVPEFI QG+LC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW+MS FCVPYLYYNL LYTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL++LL
Sbjct: 61  IFYLLTGHWIMSFFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDHDS
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]

BLAST of Sed0000675 vs. NCBI nr
Match: XP_038907022.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 8.3e-64
Identity = 124/137 (90.51%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFFFIIALL+L+VFQLMCLADLEFDYINPYDSSSRINKVVVPEFI QG+LC
Sbjct: 1   MADIYVWLLSFFFIIALLVLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLL+GHW+MSLFC+PYLYYNL LYTQRKHLVDVTEIFNQLPWEKKQRLFKL+YLV+LL
Sbjct: 61  IFYLLSGHWIMSLFCIPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLL 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]

BLAST of Sed0000675 vs. NCBI nr
Match: XP_022996131.1 (protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein cornichon homolog 4-like [Cucurbita maxima])

HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63
Identity = 125/137 (91.24%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFFFIIALLIL+VFQLMCLADLEFDYINPYDSSSRINKVVVPEFI QG+LC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW+MS FC+PYLYYNL LYTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL++LL
Sbjct: 61  IFYLLTGHWIMSFFCLPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDHDS
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]

BLAST of Sed0000675 vs. NCBI nr
Match: XP_022957749.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63
Identity = 124/137 (90.51%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFFFIIALLIL+VFQLMCLADLEFDYINPYDSSSRINKVV+PEFI QG+LC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVIPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW+MS FCVPYLYYNL LYTQR+HLVDVTEIFNQLPWEKK+RLFKLVYL++LL
Sbjct: 61  IFYLLTGHWIMSFFCVPYLYYNLRLYTQREHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDHDS
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]

BLAST of Sed0000675 vs. NCBI nr
Match: XP_022922295.1 (protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6579448.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016921.1 Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.5 bits (641), Expect = 4.1e-63
Identity = 124/137 (90.51%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFF IIALLIL+VFQLMCLADLEFDYINPYDSSSRINKVV+PEFI QG+LC
Sbjct: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW+MSLFCVPYLYYN+ LYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLV+L+
Sbjct: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]

BLAST of Sed0000675 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.0e-53
Identity = 99/136 (72.79%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           MGDI+ WL+SFFF+IAL+ ++V+QL+CLADLEFDYINPYDS+SRIN VV+PEFI QG+LC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW M+L C+PYLYYN  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWLIYSALEDHD 137
           FL+IFW+IYSAL+D++
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]

BLAST of Sed0000675 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 6.6e-48
Identity = 90/136 (66.18%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           MG+++ W++SF  +I LL L+V+QL+ LADLEFDYINPYDS+SRIN VV+PE I QG LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYL+TGHW M+L CVPYLYYN  LY++++HL+DVTEIFN L WEKK+RLFKL Y++  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWLIYSALEDHD 137
           FL+IFWLIYS L+D++
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]

BLAST of Sed0000675 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 6.2e-46
Identity = 85/115 (73.91%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 22  VFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLCFFYLLTGHWVMSLFCVPYLYY 81
           +F L+CLADLEFDYINPYDS+SRIN VV+PEFI QG+LC FYLLTGHW M+L C+PYLYY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALLFLSIFWLIYSALEDHD 137
           N  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+IFW+IYSAL+D++
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of Sed0000675 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-38
Identity = 72/134 (53.73%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           MGD+  W++SF F+  L+I++++QL CLADLEFD INPYD SSRIN++V+PEF  QGLLC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            +Y+LTGHW M++  +P+L+YN+ LY +R+HL DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWLIYSALED 135
           F++ +WLI+SAL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]

BLAST of Sed0000675 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.4e-28
Identity = 64/138 (46.38%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 3   DIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLCFF 62
           D+++W++SFF  +AL+  + +Q++CL DLE DY+NP+++S+RIN++V+PEFI QG LC  
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALLFL 122
           +LLT HWV  L  VP   Y+  LY +R++L+DVTE+F  + +EKK R  KL + V L  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWL----IYSALEDHD 137
            +F L    +YS  ED D
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

[Close]

BLAST of Sed0000675 vs. ExPASy TrEMBL
Match: A0A6J1K131 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.2e-64
Identity = 125/137 (91.24%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFFFIIALLIL+VFQLMCLADLEFDYINPYDSSSRINKVVVPEFI QG+LC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW+MS FC+PYLYYNL LYTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL++LL
Sbjct: 61  IFYLLTGHWIMSFFCLPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDHDS
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]

BLAST of Sed0000675 vs. ExPASy TrEMBL
Match: A0A6J1H2W0 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.9e-64
Identity = 124/137 (90.51%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFFFIIALLIL+VFQLMCLADLEFDYINPYDSSSRINKVV+PEFI QG+LC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVIPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW+MS FCVPYLYYNL LYTQR+HLVDVTEIFNQLPWEKK+RLFKLVYL++LL
Sbjct: 61  IFYLLTGHWIMSFFCVPYLYYNLRLYTQREHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDHDS
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]

BLAST of Sed0000675 vs. ExPASy TrEMBL
Match: A0A6J1E8A9 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.0e-63
Identity = 124/137 (90.51%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFF IIALLIL+VFQLMCLADLEFDYINPYDSSSRINKVV+PEFI QG+LC
Sbjct: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW+MSLFCVPYLYYN+ LYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLV+L+
Sbjct: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]

BLAST of Sed0000675 vs. ExPASy TrEMBL
Match: A0A6J1I130 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468923 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.4e-63
Identity = 124/137 (90.51%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFF IIALLIL+VFQLMCLADLEFDYINPYDSSSRINKVV+PEFI QG+LC
Sbjct: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
           FFYLLTGHW+MSLFCVPYLYYN+ LYTQRKHLVDVTEIFNQL WEKKQRLFKLVYLV+L+
Sbjct: 61  FFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLAWEKKQRLFKLVYLVSLI 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]

BLAST of Sed0000675 vs. ExPASy TrEMBL
Match: A0A0A0KMS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157960 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.4e-62
Identity = 123/137 (89.78%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           M DIYVWLLSFFFIIALL+L+VFQLMCLADLEFDYINPYDSSSRINKVVVPEFI QG+LC
Sbjct: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLL+GHWVMSL C+P LYYNL +YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLV+LL
Sbjct: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120

Query: 121 FLSIFWLIYSALEDHDS 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]

BLAST of Sed0000675 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 208.8 bits (530), Expect = 2.8e-54
Identity = 99/136 (72.79%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           MGDI+ WL+SFFF+IAL+ ++V+QL+CLADLEFDYINPYDS+SRIN VV+PEFI QG+LC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYLLTGHW M+L C+PYLYYN  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWLIYSALEDHD 137
           FL+IFW+IYSAL+D++
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]

BLAST of Sed0000675 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 191.4 bits (485), Expect = 4.7e-49
Identity = 90/136 (66.18%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           MG+++ W++SF  +I LL L+V+QL+ LADLEFDYINPYDS+SRIN VV+PE I QG LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            FYL+TGHW M+L CVPYLYYN  LY++++HL+DVTEIFN L WEKK+RLFKL Y++  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWLIYSALEDHD 137
           FL+IFWLIYS L+D++
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]

BLAST of Sed0000675 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 184.9 bits (468), Expect = 4.4e-47
Identity = 85/115 (73.91%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 22  VFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLCFFYLLTGHWVMSLFCVPYLYY 81
           +F L+CLADLEFDYINPYDS+SRIN VV+PEFI QG+LC FYLLTGHW M+L C+PYLYY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALLFLSIFWLIYSALEDHD 137
           N  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+IFW+IYSAL+D++
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of Sed0000675 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 160.6 bits (405), Expect = 8.9e-40
Identity = 72/134 (53.73%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MGDIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLC 60
           MGD+  W++SF F+  L+I++++QL CLADLEFD INPYD SSRIN++V+PEF  QGLLC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  FFYLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALL 120
            +Y+LTGHW M++  +P+L+YN+ LY +R+HL DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWLIYSALED 135
           F++ +WLI+SAL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]

BLAST of Sed0000675 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.4e-29
Identity = 64/138 (46.38%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 3   DIYVWLLSFFFIIALLILLVFQLMCLADLEFDYINPYDSSSRINKVVVPEFIAQGLLCFF 62
           D+++W++SFF  +AL+  + +Q++CL DLE DY+NP+++S+RIN++V+PEFI QG LC  
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWVMSLFCVPYLYYNLTLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVALLFL 122
           +LLT HWV  L  VP   Y+  LY +R++L+DVTE+F  + +EKK R  KL + V L  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWL----IYSALEDHD 137
            +F L    +YS  ED D
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

The following BLAST results are available for this feature:

BLAST of Sed0000675 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532889.1	4.8e-64	91.97	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 pr...	[more]
XP_038907022.1	8.3e-64	90.51	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_022996131.1	1.1e-63	91.24	protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein corn...	[more]
XP_022957749.1	1.8e-63	90.51	protein cornichon homolog 4-like [Cucurbita moschata]	[more]
XP_022922295.1	4.1e-63	90.51	protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein co...	[more]

BLAST of Sed0000675 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	4.0e-53	72.79	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	6.6e-48	66.18	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	6.2e-46	73.91	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	1.2e-38	53.73	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	3.4e-28	46.38	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Sed0000675 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K131	5.2e-64	91.24	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=...	[more]
A0A6J1H2W0	8.9e-64	90.51	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 P...	[more]
A0A6J1E8A9	2.0e-63	90.51	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 P...	[more]
A0A6J1I130	3.4e-63	90.51	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468923 PE=...	[more]
A0A0A0KMS0	6.4e-62	89.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157960 PE=3 SV=1	[more]

BLAST of Sed0000675 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	2.8e-54	72.79	Cornichon family protein	[more]
AT1G62880.1	4.7e-49	66.18	Cornichon family protein	[more]
AT1G12340.1	4.4e-47	73.91	Cornichon family protein	[more]
AT4G12090.1	8.9e-40	53.73	Cornichon family protein	[more]
AT3G12180.1	2.4e-29	46.38	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..125 e-value: 1.9E-58 score: 210.2
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 6..125 e-value: 7.7E-42 score: 142.5
None	No IPR available	PANTHER	PTHR12290:SF25	PROTEIN CORNICHON-LIKE PROTEIN 4	coord: 1..135
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000675.1	Sed0000675.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane