Sed0000662 (gene) Chayote v1

Overview


Name	Sed0000662
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein ZAT12-like
Location	LG07: 40358709 .. 40359443 (-)
RNA-Seq Expression	Sed0000662
Synteny	Sed0000662

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCACGCGATTTCCGTTTTCCCCTCTTCACAATCACACTTTCTAGAGAGAGAAAATTTTTCATTTCAATTTCAATTTCCATCATGATGATGAAGAGAGAGAGAAACCTCCAGAGCGTAGCCATGGCGGATTTCGATCATTTCGAATCCTCTTCTCCTCCTTCCTCACCGACGGCTCGCGTTTTCGAGTGCAAGACCTGCAACCGCCAGTTCTCCTCCTTCCAGGCGCTCGGCGGCCACCGCGCCAGCCACAAGAAGCCGCGGATCGTCGGAACCGACGGCGGAAACTCCGACGGATCTTCCTCGCAAGGCTCTCCGATCAAGCCGAAGACGCACGAGTGTAGTGTCTGCGGATTGGAGTTTGCGATTGGACAAGCGCTCGGCGGACATATGAGGAGACATCGAGCCGCTACGTTGTTGGCCGATCATGGAGCACGGCGGACGAACAAGCATCATCATCCGAGTAGTTTGTCTCCTCCGCCGCTGGTGAAGAAGACGAACGGTGGAGGGAGGATTTTGTGCTTGGATCTGAACTTGACTCCGTCTGAAAACGACAGTAAGTTTCTAGAGCTTGGAAAGAGTATTTCTATGGTTGATTGTTTCTTTTGAATTTAGAGCAGTACATGTGGATATATCAGTTTTGTTGATTCTGTAATCTAGATCTCTTTGTTCGTTCACAAGGATACACACATACATATATGAATCTAGATCTTCATATCATTCGAATCAATCTCAG

mRNA sequence

CCTCACGCGATTTCCGTTTTCCCCTCTTCACAATCACACTTTCTAGAGAGAGAAAATTTTTCATTTCAATTTCAATTTCCATCATGATGATGAAGAGAGAGAGAAACCTCCAGAGCGTAGCCATGGCGGATTTCGATCATTTCGAATCCTCTTCTCCTCCTTCCTCACCGACGGCTCGCGTTTTCGAGTGCAAGACCTGCAACCGCCAGTTCTCCTCCTTCCAGGCGCTCGGCGGCCACCGCGCCAGCCACAAGAAGCCGCGGATCGTCGGAACCGACGGCGGAAACTCCGACGGATCTTCCTCGCAAGGCTCTCCGATCAAGCCGAAGACGCACGAGTGTAGTGTCTGCGGATTGGAGTTTGCGATTGGACAAGCGCTCGGCGGACATATGAGGAGACATCGAGCCGCTACGTTGTTGGCCGATCATGGAGCACGGCGGACGAACAAGCATCATCATCCGAGTAGTTTGTCTCCTCCGCCGCTGGTGAAGAAGACGAACGGTGGAGGGAGGATTTTGTGCTTGGATCTGAACTTGACTCCGTCTGAAAACGACAGTAAGTTTCTAGAGCTTGGAAAGAGTATTTCTATGGTTGATTGTTTCTTTTGAATTTAGAGCAGTACATGTGGATATATCAGTTTTGTTGATTCTGTAATCTAGATCTCTTTGTTCGTTCACAAGGATACACACATACATATATGAATCTAGATCTTCATATCATTCGAATCAATCTCAG

Coding sequence (CDS)

ATGATGATGAAGAGAGAGAGAAACCTCCAGAGCGTAGCCATGGCGGATTTCGATCATTTCGAATCCTCTTCTCCTCCTTCCTCACCGACGGCTCGCGTTTTCGAGTGCAAGACCTGCAACCGCCAGTTCTCCTCCTTCCAGGCGCTCGGCGGCCACCGCGCCAGCCACAAGAAGCCGCGGATCGTCGGAACCGACGGCGGAAACTCCGACGGATCTTCCTCGCAAGGCTCTCCGATCAAGCCGAAGACGCACGAGTGTAGTGTCTGCGGATTGGAGTTTGCGATTGGACAAGCGCTCGGCGGACATATGAGGAGACATCGAGCCGCTACGTTGTTGGCCGATCATGGAGCACGGCGGACGAACAAGCATCATCATCCGAGTAGTTTGTCTCCTCCGCCGCTGGTGAAGAAGACGAACGGTGGAGGGAGGATTTTGTGCTTGGATCTGAACTTGACTCCGTCTGAAAACGACAGTAAGTTTCTAGAGCTTGGAAAGAGTATTTCTATGGTTGATTGTTTCTTTTGA

Protein sequence

MMMKRERNLQSVAMADFDHFESSSPPSSPTARVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSPPPLVKKTNGGGRILCLDLNLTPSENDSKFLELGKSISMVDCFF

Homology

[Close]

BLAST of Sed0000662 vs. NCBI nr
Match: XP_022942693.1 (zinc finger protein ZAT12-like [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 4.1e-68
Identity = 144/193 (74.61%), Postives = 151/193 (78.24%), Query Frame = 0


Query: 2   MMKRERNLQSV----------------AMADFDHFESSSPPSSPTARVFECKTCNRQFSS 61
           MMKRER+L+SV                  ADF+   SSSPPS    RVFECKTCNRQF S
Sbjct: 1   MMKRERDLESVTTMANCLMLLSRSSATTTADFES-SSSSPPSLSPNRVFECKTCNRQFPS 60

Query: 62  FQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRR 121
           FQALGGHRASHKKPRI   DGGNSDGSSSQGSP KPKTHECS+CGLEFAIGQALGGHMRR
Sbjct: 61  FQALGGHRASHKKPRI---DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRR 120

Query: 122 HRAATLLADHGARRTNKHHHPSSLSP-----PPLVKKTNGGGRILCLDLNLTPSENDSKF 174
           HRA TLL DHG  R   +HHPSSLSP     PPLVKKTNGGGRILCLDLNLTPSENDSKF
Sbjct: 121 HRATTLLTDHG--RLTNNHHPSSLSPPPRSQPPLVKKTNGGGRILCLDLNLTPSENDSKF 180

[Close]

BLAST of Sed0000662 vs. NCBI nr
Match: XP_023553550.1 (zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.1 bits (684), Expect = 5.4e-68
Identity = 144/194 (74.23%), Postives = 151/194 (77.84%), Query Frame = 0


Query: 2   MMKRERNLQSV-----------------AMADFDHFESSSPPSSPTARVFECKTCNRQFS 61
           MMKRER+L+SV                   ADF+   SSSPPS    RVFECKTCNRQF 
Sbjct: 1   MMKRERDLESVTTMANCLMLLSRSSATTTTADFE--SSSSPPSLSPNRVFECKTCNRQFP 60

Query: 62  SFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMR 121
           SFQALGGHRASHKKPRI   DGGNSDGSSSQGSP KPKTHECS+CGLEFAIGQALGGHMR
Sbjct: 61  SFQALGGHRASHKKPRI---DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMR 120

Query: 122 RHRAATLLADHGARRTNKHHHPSSLSP-----PPLVKKTNGGGRILCLDLNLTPSENDSK 174
           RHRA TLL DHG  R   +HHPSSLSP     PPLVKKTNGGGRILCLDLNLTPSENDSK
Sbjct: 121 RHRATTLLTDHG--RLTNNHHPSSLSPPPRSQPPLVKKTNGGGRILCLDLNLTPSENDSK 180

[Close]

BLAST of Sed0000662 vs. NCBI nr
Match: XP_038892761.1 (zinc finger protein ZAT12-like [Benincasa hispida])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 144/193 (74.61%), Postives = 151/193 (78.24%), Query Frame = 0


Query: 3   MKRERNLQSV----------------AMADFDHFESSSPPSSPTARVFECKTCNRQFSSF 62
           MKRER+L+S+                  ADF+   SSSP      RVFECKTCNRQFSSF
Sbjct: 1   MKRERDLESITTMANCLMLLSRNNASTTADFESSSSSSP-----NRVFECKTCNRQFSSF 60

Query: 63  QALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRRH 122
           QALGGHRASHKKPRIVG DGGNSDGSSSQGSP KPKTHECS+CGLEFAIGQALGGHMRRH
Sbjct: 61  QALGGHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRH 120

Query: 123 RAATLLADHGARRTNKHHHPSSLSP-----PPLVKKTNGGGRILCLDLNLTPSENDSKFL 175
           RA TLL DH AR TN   HPSSLSP     PP+VKKTNG GRILCLDLNLTPSENDSKFL
Sbjct: 121 RATTLLNDH-ARLTN---HPSSLSPPPRSQPPVVKKTNGSGRILCLDLNLTPSENDSKFL 180

[Close]

BLAST of Sed0000662 vs. NCBI nr
Match: XP_022985423.1 (zinc finger protein ZAT12-like [Cucurbita maxima])

HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67
Identity = 141/190 (74.21%), Postives = 149/190 (78.42%), Query Frame = 0


Query: 2   MMKRERNLQSV-------------AMADFDHFESSSPPSSPTARVFECKTCNRQFSSFQA 61
           MMKRER+L+SV             +      FESSS PS    RVFECKTCNRQF SFQA
Sbjct: 1   MMKRERDLESVTTMANCLMLLSRSSATTTADFESSSSPSLSPNRVFECKTCNRQFPSFQA 60

Query: 62  LGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRRHRA 121
           LGGHRASHKKPRI   DGGNSDG+SSQGSP KPKTHECS+CGLEFAIGQALGGHMRRHRA
Sbjct: 61  LGGHRASHKKPRI---DGGNSDGTSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRA 120

Query: 122 ATLLADHGARRTNKHHHPSSLSP-----PPLVKKTNGGGRILCLDLNLTPSENDSKFLEL 174
            TLL DHG  R   +HHPSSLSP     PPLVKKTNGGGRILCLDLNLTPSENDSKFL+L
Sbjct: 121 TTLLTDHG--RLTNNHHPSSLSPPPRSQPPLVKKTNGGGRILCLDLNLTPSENDSKFLQL 180

[Close]

BLAST of Sed0000662 vs. NCBI nr
Match: KAG7030733.1 (Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-66
Identity = 135/164 (82.32%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 15  ADFDHFESSSPPSSPTARVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSS 74
           ADF+ + SSSPPS    RVFECKTCNRQF SFQALGGHRASHKKPRI   DGGNSDGSSS
Sbjct: 17  ADFESY-SSSPPSLSPNRVFECKTCNRQFPSFQALGGHRASHKKPRI---DGGNSDGSSS 76

Query: 75  QGSPIKPKTHECSVCGLEFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSP--- 134
           QGSP KPKTHECS+CGLEFAIGQALGGHMRRHRA TLL DHG  R   +HHPSSLSP   
Sbjct: 77  QGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTLLTDHG--RLTNNHHPSSLSPPPR 136

Query: 135 --PPLVKKTNGGGRILCLDLNLTPSENDSKFLELGKSISMVDCF 174
             PPLVKKTNGGGRILCLDLNLTPSENDSKFL+LGKSISM+DCF
Sbjct: 137 SQPPLVKKTNGGGRILCLDLNLTPSENDSKFLQLGKSISMLDCF 174

[Close]

BLAST of Sed0000662 vs. ExPASy Swiss-Prot
Match: Q42410 (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 68/139 (48.92%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 32  RVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGL 91
           RVF CKTC +QF SFQALGGHRASHKKP        N   SS     +K  +H C +CG+
Sbjct: 37  RVFTCKTCLKQFHSFQALGGHRASHKKP-------NNDALSSGLMKKVKTSSHPCPICGV 96

Query: 92  EFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSPPPLV---KKTNGGGRILCLD 151
           EF +GQALGGHMRRHR  +  A  GA  T       +L P P V   KK++ G R+ CLD
Sbjct: 97  EFPMGQALGGHMRRHRNESGAAG-GALVTR------ALLPEPTVTTLKKSSSGKRVACLD 156

Query: 152 LNLTPSENDSKFLELGKSI 168
           L+L   +N +  LELG+++
Sbjct: 157 LSLGMVDNLNLKLELGRTV 161

[Close]

BLAST of Sed0000662 vs. ExPASy Swiss-Prot
Match: Q9SLD4 (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-24
Identity = 63/138 (45.65%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 28  SPTARVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECS 87
           S T+  FECKTCN++FSSFQALGGHRASHKKP++        D             H+CS
Sbjct: 41  SHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVE---QKDVKHLSNDYKGNHFHKCS 100

Query: 88  VCGLEFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSP----PPLVKKTNGGGR 147
           +C   F  GQALGGHMRRHR++  +             PS +SP     P++K+     R
Sbjct: 101 ICSQSFGTGQALGGHMRRHRSSMTV------------EPSFISPMIPSMPVLKRCGSSKR 160

Query: 148 ILCLDLNLTPSENDSKFL 162
           IL LDLNLTP END +++
Sbjct: 161 ILSLDLNLTPLENDLEYI 163

[Close]

BLAST of Sed0000662 vs. ExPASy Swiss-Prot
Match: Q42453 (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-21
Identity = 66/141 (46.81%), Postives = 85/141 (60.28%), Query Frame = 0


Query: 32  RVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKT---HECSV 91
           RVF CKTC ++FSSFQALGGHRASHKK  ++     NSD  S  GS    KT   H C +
Sbjct: 38  RVFRCKTCLKEFSSFQALGGHRASHKK--LI-----NSDNPSLLGSLSNKKTKTSHPCPI 97

Query: 92  CGLEFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSPPPLVKKTNGGGRILCLD 151
           CG++F +GQALGGHMRRHR   +          +   P + +   L KK + G R+ CLD
Sbjct: 98  CGVKFPMGQALGGHMRRHRNEKV----SGSLVTRSFLPETTTVTAL-KKFSSGKRVACLD 157

Query: 152 LNLTPSENDSKF-LELGKSIS 169
           L+L   E+   + LELG++IS
Sbjct: 158 LDLDSMESLVNWKLELGRTIS 166

[Close]

BLAST of Sed0000662 vs. ExPASy Swiss-Prot
Match: Q9LX85 (Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-21
Identity = 65/137 (47.45%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 32  RVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGL 91
           RVF CKTC ++FSSFQALGGHRASHKK  ++ +   +  GS S        +H C +CG+
Sbjct: 35  RVFRCKTCLKEFSSFQALGGHRASHKK--LINSSDPSLLGSLSNKKTKTATSHPCPICGV 94

Query: 92  EFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSPPPLVKKTNGGGRILCLDLNL 151
           EF +GQALGGHMRRHR+    A  G   T +   P + +   L KK++ G R+ CLDL+ 
Sbjct: 95  EFPMGQALGGHMRRHRSEK--ASPGTLVT-RSFLPETTTVTTL-KKSSSGKRVACLDLDS 154

Query: 152 TPSENDSKFLELGKSIS 169
             S  + K LELG++IS
Sbjct: 155 MESLVNWK-LELGRTIS 164

[Close]

BLAST of Sed0000662 vs. ExPASy Swiss-Prot
Match: Q681X4 (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-20
Identity = 72/173 (41.62%), Postives = 89/173 (51.45%), Query Frame = 0


Query: 33  VFECKTCNRQFSSFQALGGHRASHKKPRI----------------VGTDGGNS----DGS 92
           V+ECKTCNR FSSFQALGGHRASHKKPR                    +G NS     GS
Sbjct: 114 VYECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGS 173

Query: 93  --SSQGSPI---KPKTHECSVCGLEFAIGQALGGHMRRHR-AATLLADHGARRTNKHHHP 152
             +SQ S I     K HECS+CG EF  GQALGGHMRRHR A T ++   A      +  
Sbjct: 174 ALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNST 233

Query: 153 SSLSPPPLVKKTNGGGRILCLDLNLTPSEND---SKF--LELGKSISMVDCFF 175
                  + +      + L LDLNL   E+D   SKF  +    + +++DC +
Sbjct: 234 EEEIEINIGRSMEQQRKYLPLDLNLPAPEDDLRESKFQGIVFSATPALIDCHY 286

[Close]

BLAST of Sed0000662 vs. ExPASy TrEMBL
Match: A0A6J1FVF5 (zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111447651 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.0e-68
Identity = 144/193 (74.61%), Postives = 151/193 (78.24%), Query Frame = 0


Query: 2   MMKRERNLQSV----------------AMADFDHFESSSPPSSPTARVFECKTCNRQFSS 61
           MMKRER+L+SV                  ADF+   SSSPPS    RVFECKTCNRQF S
Sbjct: 1   MMKRERDLESVTTMANCLMLLSRSSATTTADFES-SSSSPPSLSPNRVFECKTCNRQFPS 60

Query: 62  FQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRR 121
           FQALGGHRASHKKPRI   DGGNSDGSSSQGSP KPKTHECS+CGLEFAIGQALGGHMRR
Sbjct: 61  FQALGGHRASHKKPRI---DGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRR 120

Query: 122 HRAATLLADHGARRTNKHHHPSSLSP-----PPLVKKTNGGGRILCLDLNLTPSENDSKF 174
           HRA TLL DHG  R   +HHPSSLSP     PPLVKKTNGGGRILCLDLNLTPSENDSKF
Sbjct: 121 HRATTLLTDHG--RLTNNHHPSSLSPPPRSQPPLVKKTNGGGRILCLDLNLTPSENDSKF 180

[Close]

BLAST of Sed0000662 vs. ExPASy TrEMBL
Match: A0A6J1JDK2 (zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111483429 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 141/190 (74.21%), Postives = 149/190 (78.42%), Query Frame = 0


Query: 2   MMKRERNLQSV-------------AMADFDHFESSSPPSSPTARVFECKTCNRQFSSFQA 61
           MMKRER+L+SV             +      FESSS PS    RVFECKTCNRQF SFQA
Sbjct: 1   MMKRERDLESVTTMANCLMLLSRSSATTTADFESSSSPSLSPNRVFECKTCNRQFPSFQA 60

Query: 62  LGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRRHRA 121
           LGGHRASHKKPRI   DGGNSDG+SSQGSP KPKTHECS+CGLEFAIGQALGGHMRRHRA
Sbjct: 61  LGGHRASHKKPRI---DGGNSDGTSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRA 120

Query: 122 ATLLADHGARRTNKHHHPSSLSP-----PPLVKKTNGGGRILCLDLNLTPSENDSKFLEL 174
            TLL DHG  R   +HHPSSLSP     PPLVKKTNGGGRILCLDLNLTPSENDSKFL+L
Sbjct: 121 TTLLTDHG--RLTNNHHPSSLSPPPRSQPPLVKKTNGGGRILCLDLNLTPSENDSKFLQL 180

[Close]

BLAST of Sed0000662 vs. ExPASy TrEMBL
Match: A0A1S3CF73 (zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103500198 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.4e-67
Identity = 140/187 (74.87%), Postives = 151/187 (80.75%), Query Frame = 0


Query: 3   MKRERNLQSV-AMAD----------FDHFESSSPPSSPTARVFECKTCNRQFSSFQALGG 62
           MKRER+L+S+  MA+           DHFESSS  SS   RVFECKTCNRQFSSFQALGG
Sbjct: 1   MKRERDLESITTMANCLMLLSRNTAADHFESSSTNSSSPNRVFECKTCNRQFSSFQALGG 60

Query: 63  HRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRRHRAATL 122
           HRASHKKPRIVG DGGNSDGSSSQGSP KPKTHECS+CGLEFAIGQALGGHMRRHRA TL
Sbjct: 61  HRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATTL 120

Query: 123 LADHGARRTNKHHHPSSLSP----PPLVKKTNGGGRILCLDLNLTPSENDSKFLELGKSI 175
           L D    R   +H   SLSP    PP+VKK+NGGGRILCLDLNLTPSENDS+FL+LGKS+
Sbjct: 121 LND---ARLLTNHPRRSLSPPPPKPPVVKKSNGGGRILCLDLNLTPSENDSRFLQLGKSV 180

[Close]

BLAST of Sed0000662 vs. ExPASy TrEMBL
Match: A0A0A0KLU2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180920 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 9.3e-66
Identity = 136/184 (73.91%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 3   MKRERNLQSVA------------MADFDHFESSSPPSSPTARVFECKTCNRQFSSFQALG 62
           MKRER L+S+              A   HFESS+  SSP  RVFECKTCNRQFSSFQALG
Sbjct: 1   MKRERELESITTMANCLMLLSRNTAPDHHFESSTSSSSPN-RVFECKTCNRQFSSFQALG 60

Query: 63  GHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRRHRAAT 122
           GHRASHKKPRIVG DGGNSDGSSSQGSP KPKTHECS+CGLEFAIGQALGGHMRRHRA T
Sbjct: 61  GHRASHKKPRIVGGDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRATT 120

Query: 123 LLADHGARRTNKHHHPSSLSPPPLVKKTNGGGRILCLDLNLTPSENDSKFLELGKSISMV 175
           LL D  AR    H        PP+VKK+NGGGRILCLDLNLTPSENDS+FL+LGKSISMV
Sbjct: 121 LLND--ARLLTNHPRSPPPQQPPVVKKSNGGGRILCLDLNLTPSENDSRFLQLGKSISMV 180

[Close]

BLAST of Sed0000662 vs. ExPASy TrEMBL
Match: A0A6J1GYC8 (zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111458600 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 140/190 (73.68%), Postives = 150/190 (78.95%), Query Frame = 0


Query: 3   MKRERNLQSV-------------AMADFDHFESSSPPSSPTARVFECKTCNRQFSSFQAL 62
           MKRER+L+S+             + ++   FESS   SS   RVFECKTCNRQF SFQAL
Sbjct: 1   MKRERDLESITTMANCLMLLSRSSASNTTDFESSL--SSSPNRVFECKTCNRQFPSFQAL 60

Query: 63  GGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGLEFAIGQALGGHMRRHRAA 122
           GGHRASHKKPRIVG DGGNSDGSSSQGSP KPKTHECS+CGLEFAIGQALGGHMRRHRA 
Sbjct: 61  GGHRASHKKPRIVGPDGGNSDGSSSQGSPTKPKTHECSICGLEFAIGQALGGHMRRHRAT 120

Query: 123 TLLADHGARRTNKHHHPSSL-----SPPPLVKKTNGGGRILCLDLNLTPSENDSKFLELG 175
           TLL DH AR TN   HPSSL     S PP+VKKTNGGGRILCLDLNLTPSEND +FL+LG
Sbjct: 121 TLLTDH-ARLTN---HPSSLSHPPRSQPPVVKKTNGGGRILCLDLNLTPSENDKQFLQLG 180

[Close]

BLAST of Sed0000662 vs. TAIR 10
Match: AT2G28710.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 125.2 bits (313), Expect = 5.2e-29
Identity = 72/151 (47.68%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 22  SSSPPSSPTARVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKP 81
           S +  +   +RVF CKTCN++F SFQALGGHRASH++   +    G++  S  +   +KP
Sbjct: 22  SKAHQNDTKSRVFACKTCNKEFPSFQALGGHRASHRRSAAL---EGHAPPSPKR---VKP 81

Query: 82  KTHECSVCGLEFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSP--PPLVKKTN 141
             HEC +CG EFA+GQALGGHMR+HR  +     G R         SL+P   P+  K +
Sbjct: 82  VKHECPICGAEFAVGQALGGHMRKHRGGS--GGGGGR---------SLAPATAPVTMKKS 141

Query: 142 GGG---RILCLDLNLTPSENDSKFLELGKSI 168
           GGG   R+LCLDLNLTP EN+   LELG+ I
Sbjct: 142 GGGNGKRVLCLDLNLTPLENEDLKLELGRFI 155

[Close]

BLAST of Sed0000662 vs. TAIR 10
Match: AT5G59820.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 114.8 bits (286), Expect = 7.1e-26
Identity = 68/139 (48.92%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 32  RVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGL 91
           RVF CKTC +QF SFQALGGHRASHKKP        N   SS     +K  +H C +CG+
Sbjct: 37  RVFTCKTCLKQFHSFQALGGHRASHKKP-------NNDALSSGLMKKVKTSSHPCPICGV 96

Query: 92  EFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSPPPLV---KKTNGGGRILCLD 151
           EF +GQALGGHMRRHR  +  A  GA  T       +L P P V   KK++ G R+ CLD
Sbjct: 97  EFPMGQALGGHMRRHRNESGAAG-GALVTR------ALLPEPTVTTLKKSSSGKRVACLD 156

Query: 152 LNLTPSENDSKFLELGKSI 168
           L+L   +N +  LELG+++
Sbjct: 157 LSLGMVDNLNLKLELGRTV 161

[Close]

BLAST of Sed0000662 vs. TAIR 10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 63/138 (45.65%), Postives = 80/138 (57.97%), Query Frame = 0


Query: 28  SPTARVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECS 87
           S T+  FECKTCN++FSSFQALGGHRASHKKP++        D             H+CS
Sbjct: 41  SHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVE---QKDVKHLSNDYKGNHFHKCS 100

Query: 88  VCGLEFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSP----PPLVKKTNGGGR 147
           +C   F  GQALGGHMRRHR++  +             PS +SP     P++K+     R
Sbjct: 101 ICSQSFGTGQALGGHMRRHRSSMTV------------EPSFISPMIPSMPVLKRCGSSKR 160

Query: 148 ILCLDLNLTPSENDSKFL 162
           IL LDLNLTP END +++
Sbjct: 161 ILSLDLNLTPLENDLEYI 163

[Close]

BLAST of Sed0000662 vs. TAIR 10
Match: AT3G46070.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 107.8 bits (268), Expect = 8.7e-24
Identity = 70/151 (46.36%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 32  RVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSP-IKPKT------H 91
           RVF CKTC R F SFQALGGHRASH K         NSD  S  GSP  KPKT      H
Sbjct: 34  RVFRCKTCERDFDSFQALGGHRASHSKLT-------NSDDKSLPGSPKKKPKTTTTTTAH 93

Query: 92  ECSVCGLEFAIGQALGGHMRRHR-------AATLLADHGARRTNKHHHPSSLSPPPLVKK 151
            C +CGLEF +GQALGGHMR+HR       A+ +L  H          P + +   L KK
Sbjct: 94  TCPICGLEFPMGQALGGHMRKHRNEKEREKASNVLVTHS-------FMPETTTVTTL-KK 153

Query: 152 TNGGGRILCLDLNLTPSEN-DSKFLELGKSI 168
           ++ G R+ CLD +LT  E+  +  LELG+++
Sbjct: 154 SSSGKRVACLDFDLTSVESFVNTELELGRTM 169

[Close]

BLAST of Sed0000662 vs. TAIR 10
Match: AT3G46080.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 104.8 bits (260), Expect = 7.3e-23
Identity = 65/137 (47.45%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 32  RVFECKTCNRQFSSFQALGGHRASHKKPRIVGTDGGNSDGSSSQGSPIKPKTHECSVCGL 91
           RVF CKTC ++FSSFQALGGHRASHKK  ++ +   +  GS S        +H C +CG+
Sbjct: 35  RVFRCKTCLKEFSSFQALGGHRASHKK--LINSSDPSLLGSLSNKKTKTATSHPCPICGV 94

Query: 92  EFAIGQALGGHMRRHRAATLLADHGARRTNKHHHPSSLSPPPLVKKTNGGGRILCLDLNL 151
           EF +GQALGGHMRRHR+    A  G   T +   P + +   L KK++ G R+ CLDL+ 
Sbjct: 95  EFPMGQALGGHMRRHRSEK--ASPGTLVT-RSFLPETTTVTTL-KKSSSGKRVACLDLDS 154

Query: 152 TPSENDSKFLELGKSIS 169
             S  + K LELG++IS
Sbjct: 155 MESLVNWK-LELGRTIS 164

The following BLAST results are available for this feature:

BLAST of Sed0000662 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942693.1	4.1e-68	74.61	zinc finger protein ZAT12-like [Cucurbita moschata]	[more]
XP_023553550.1	5.4e-68	74.23	zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo]	[more]
XP_038892761.1	1.6e-67	74.61	zinc finger protein ZAT12-like [Benincasa hispida]	[more]
XP_022985423.1	2.7e-67	74.21	zinc finger protein ZAT12-like [Cucurbita maxima]	[more]
KAG7030733.1	1.0e-66	82.32	Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0000662 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42410	1.0e-24	48.92	Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1	[more]
Q9SLD4	1.7e-24	45.65	Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1	[more]
Q42453	1.0e-21	46.81	Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1	[more]
Q9LX85	1.0e-21	47.45	Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1	[more]
Q681X4	1.9e-20	41.62	Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1	[more]

BLAST of Sed0000662 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVF5	2.0e-68	74.61	zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111447651 PE=...	[more]
A0A6J1JDK2	1.3e-67	74.21	zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111483429 PE=4 ...	[more]
A0A1S3CF73	6.4e-67	74.87	zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103500198 PE=4 SV=1	[more]
A0A0A0KLU2	9.3e-66	73.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180920 PE=4 SV=1	[more]
A0A6J1GYC8	1.2e-65	73.68	zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111458600 PE=...	[more]

BLAST of Sed0000662 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28710.1	5.2e-29	47.68	C2H2-type zinc finger family protein	[more]
AT5G59820.1	7.1e-26	48.92	C2H2-type zinc finger family protein	[more]
AT2G37430.1	1.2e-25	45.65	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G46070.1	8.7e-24	46.36	C2H2-type zinc finger family protein	[more]
AT3G46080.1	7.3e-23	47.45	C2H2-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 84..106 e-value: 0.58 score: 19.2 coord: 34..56 e-value: 0.2 score: 20.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 86..106
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 36..56
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 84..106 score: 8.932892
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 34..61 score: 10.346144
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 84..108 e-value: 5.3E-10 score: 39.0 coord: 33..58 e-value: 1.4E-12 score: 47.3
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 32..106 e-value: 1.2E-9 score: 40.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..81
None	No IPR available	PANTHER	PTHR26374	ZINC FINGER PROTEIN ZAT5	coord: 24..173
None	No IPR available	PANTHER	PTHR26374:SF379	ZINC FINGER PROTEIN ZAT12	coord: 24..173
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 32..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000662.1	Sed0000662.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010200	response to chitin