
Sed0000623 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCATGCACGAGAAATGAAATCAATGGAAAAGCAACTTTTTGTTTTGTTGATCGTGTTGCCATTAGTAATACTTGAGCCAGTCAAGGCAGCCGAGTTTACTAAATGGCATATCCACATCGTGAACGGACTAAGCAATGGTCAAATGTTGATGGTGCACTGCAAATCTAAGGATGTTGATCTAGGCGTACACAATGTCAGCGTTGGAGCTGAATTTGATTGGGTTTTTCGTGTCAACCTTATGATGACTACACTTTTTTGGTGTACTTCGCAAAAGCCAAATGCTCAATCTGTTTCCTTTGAGGCTTTTTGGGTCGAGAGTACATCTATTTGGCTCTATGATCATTGTTATGAGACTAACTGTATTTGGATCGCAAGAGATGATGGAATCTATTTGGAAGCGAACGGAGAAAATAGGGACGATTTCATTCATAAGTGGCTGTAA ATGTTTCATGCACGAGAAATGAAATCAATGGAAAAGCAACTTTTTGTTTTGTTGATCGTGTTGCCATTAGTAATACTTGAGCCAGTCAAGGCAGCCGAGTTTACTAAATGGCATATCCACATCGTGAACGGACTAAGCAATGGTCAAATGTTGATGGTGCACTGCAAATCTAAGGATGTTGATCTAGGCGTACACAATGTCAGCGTTGGAGCTGAATTTGATTGGGTTTTTCGTGTCAACCTTATGATGACTACACTTTTTTGGTGTACTTCGCAAAAGCCAAATGCTCAATCTGTTTCCTTTGAGGCTTTTTGGGTCGAGAGTACATCTATTTGGCTCTATGATCATTGTTATGAGACTAACTGTATTTGGATCGCAAGAGATGATGGAATCTATTTGGAAGCGAACGGAGAAAATAGGGACGATTTCATTCATAAGTGGCTGTAA ATGTTTCATGCACGAGAAATGAAATCAATGGAAAAGCAACTTTTTGTTTTGTTGATCGTGTTGCCATTAGTAATACTTGAGCCAGTCAAGGCAGCCGAGTTTACTAAATGGCATATCCACATCGTGAACGGACTAAGCAATGGTCAAATGTTGATGGTGCACTGCAAATCTAAGGATGTTGATCTAGGCGTACACAATGTCAGCGTTGGAGCTGAATTTGATTGGGTTTTTCGTGTCAACCTTATGATGACTACACTTTTTTGGTGTACTTCGCAAAAGCCAAATGCTCAATCTGTTTCCTTTGAGGCTTTTTGGGTCGAGAGTACATCTATTTGGCTCTATGATCATTGTTATGAGACTAACTGTATTTGGATCGCAAGAGATGATGGAATCTATTTGGAAGCGAACGGAGAAAATAGGGACGATTTCATTCATAAGTGGCTGTAA MFHAREMKSMEKQLFVLLIVLPLVILEPVKAAEFTKWHIHIVNGLSNGQMLMVHCKSKDVDLGVHNVSVGAEFDWVFRVNLMMTTLFWCTSQKPNAQSVSFEAFWVESTSIWLYDHCYETNCIWIARDDGIYLEANGENRDDFIHKWL Homology
BLAST of Sed0000623 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 204.9 bits (520), Expect = 4.8e-49 Identity = 92/142 (64.79%), Postives = 109/142 (76.76%), Query Frame = 0
BLAST of Sed0000623 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia]) HSP 1 Score: 191.4 bits (485), Expect = 5.4e-45 Identity = 87/148 (58.78%), Postives = 106/148 (71.62%), Query Frame = 0
BLAST of Sed0000623 vs. NCBI nr
Match: XP_031745090.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 7.1e-45 Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 0
BLAST of Sed0000623 vs. NCBI nr
Match: XP_016902699.1 (PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]) HSP 1 Score: 187.2 bits (474), Expect = 1.0e-43 Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 0
BLAST of Sed0000623 vs. NCBI nr
Match: XP_022143829.1 (S-protein homolog 74-like [Momordica charantia]) HSP 1 Score: 186.0 bits (471), Expect = 2.3e-43 Identity = 80/138 (57.97%), Postives = 103/138 (74.64%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.1e-19 Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.5e-18 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10 Identity = 34/102 (33.33%), Postives = 51/102 (50.00%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09 Identity = 40/137 (29.20%), Postives = 63/137 (45.99%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07 Identity = 44/142 (30.99%), Postives = 59/142 (41.55%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45 Identity = 87/148 (58.78%), Postives = 106/148 (71.62%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 5.0e-44 Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43 Identity = 80/138 (57.97%), Postives = 103/138 (74.64%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.5e-43 Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = 0
BLAST of Sed0000623 vs. ExPASy TrEMBL
Match: A0A5A7VL75 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001560 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 73/143 (51.05%), Postives = 98/143 (68.53%), Query Frame = 0
BLAST of Sed0000623 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 95.9 bits (237), Expect = 2.9e-20 Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Sed0000623 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 92.4 bits (228), Expect = 3.2e-19 Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of Sed0000623 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 72.4 bits (176), Expect = 3.4e-13 Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of Sed0000623 vs. TAIR 10
Match: AT2G06090.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 64.3 bits (155), Expect = 9.3e-11 Identity = 47/128 (36.72%), Postives = 67/128 (52.34%), Query Frame = 0
BLAST of Sed0000623 vs. TAIR 10
Match: AT1G26798.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 61.6 bits (148), Expect = 6.1e-10 Identity = 44/136 (32.35%), Postives = 66/136 (48.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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