Sed0000610 (gene) Chayote v1

Overview


Name	Sed0000610
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Protein transport protein SEC13
Location	LG08: 28269927 .. 28271707 (-)
RNA-Seq Expression	Sed0000610
Synteny	Sed0000610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGTTGGGGGTTTCAAACATTGAATACACGATATTTTGGTCGGCCAGCCTCCTGCAACCAAAACACCCGAGGAGGAAACGGAGCTGAACGAGCAGATCGGCGGCCGAAGTCTTGTTCTTGACCGGCGACTTGCTTTCTCGGAGCTCTCCAGTCCCACTGTCTCAACGGTAACTCAAATCCCTACTCTCTTTGATTTATTGTCCATTGGAACATTCCAGATCTGCTTCCCGCTTTGATTCTGCAGTTTCTAAATGCTTTCAATTTCTTCATTTCGTTTATCCTTTTTCTCAAATCGAGTGGTTCCGTCCCTATTCCTGTCAATAATGTTCGATCTAGAAGTGAATTTGTGTTTTTGAGTTAGCGCATGGACACTTACTTCCATCATTTGAGTTGTTTTTGTTAGATCTGCAATGTGTACTGTTAATCAGCGAACTTTAAAATGAAGAATGGGGAAAGAAGCGCCTCCTCTTAATTGGCTGTTTTGGAGTGTATATATATGTGTGTGTGTGTGAATTGTTATGCATACTGGGTTTTTTTTTTTTTTTGATTTTGCATAGTATTTTGATATTTAAATTCATTCTCTATCATAGATATAAGGGTGCTTGCTAGAGATTGGGGGAGAAGGGTAAAAGGACTTAATAGAGTGAAAAGAAATCCTGTACAATGTCTTCCCAGAAGATTGAAACTGGCCACCAAGATATGGTTCATGATGTACAGATGGATTACTATGGAAAGCGCATTGCGACAGCTTCCTCTGATTTTACCATTAAAATTATTAGTGTTTGCAAAAACTCTGGTTCACAACTCTTAGCTTCATTGAGTGGTCATAAAGGCCCAGTTTGGCAAGTTGCTTGGGCACACCCAAAGTTTGGTTCATTGCTAGCGTCCAGCTCTTACGATGGTCAAGTGATAATCTGGAAGGAAGGAAATCAAAATCAATGGGAGCAGGCTCATGTTTTTAATGTACATAAGTCTTCGGTGAACTCCATTGCCTGGGCACCCCACGAACTTGGCCTCTGCTTGGCATGTGGATCGTCCGATGGAAGTATTTCAGTCTTTATTGCTAGATCTGATGGTGGCTGGGACAATAATCAAATTGAACAAGCCCACTCAGTTGGAGTAACCTCAGTTTCATGGGGCCCTACGACGGCTCCAGGTTCCTTAGTTGGATCCAGTTCGGTGGACCCTGTTTGGAAGCTGGCTTCTGGGGGCTTTGATAGTACGGTGAAGGTGTGGACGCTTAAAGATGGAAGCTGGAGGAGGGATTCCCCTCCTGCCATTCAAATGCACACTGATTGGGTGAGGGATGTAGCTTGGTCACCGAACCTAGGGCTTCAAAAGTCCTCCATTGCAAGTGGTTCCCAGGATGGGACAGTGATTATTTGGTCTGTTGCAAAGGAAGGAGGGAGATGGGAAGGCACAGTGATGAATGATTTCAAGACTCCAGTCTGGAAGGTTTCATGGTCATTGACCGGGGACTTATTGGCTGTTGCTGACGGGAATAACAATGTTACATTGTGGAAAGAAGCAGTTGGTGGTAAATGGCAGCAAGTAACTACAGTTTAGCCTTAAGGTTACTCATTTTTAGTCTTTAATTATCTTTTCATTATGTTTTGTGTCTTGCGAGGAGCATGTTGTTCAATATTGTTAAACAATTTCTCTGTATTTTAGTTCACAATATTTGTTATCATTGCATGTTTTCATAACTTAATCAGATTTTGGGGGTGTGGCAACACTAATATGTTCAGGTTTTATTAAATATTCTCTGGTTCTGGCTT

mRNA sequence

AAAAGGTTGGGGGTTTCAAACATTGAATACACGATATTTTGGTCGGCCAGCCTCCTGCAACCAAAACACCCGAGGAGGAAACGGAGCTGAACGAGCAGATCGGCGGCCGAAGTCTTGTTCTTGACCGGCGACTTGCTTTCTCGGAGCTCTCCAGTCCCACTGTCTCAACGATATAAGGGTGCTTGCTAGAGATTGGGGGAGAAGGGTAAAAGGACTTAATAGAGTGAAAAGAAATCCTGTACAATGTCTTCCCAGAAGATTGAAACTGGCCACCAAGATATGGTTCATGATGTACAGATGGATTACTATGGAAAGCGCATTGCGACAGCTTCCTCTGATTTTACCATTAAAATTATTAGTGTTTGCAAAAACTCTGGTTCACAACTCTTAGCTTCATTGAGTGGTCATAAAGGCCCAGTTTGGCAAGTTGCTTGGGCACACCCAAAGTTTGGTTCATTGCTAGCGTCCAGCTCTTACGATGGTCAAGTGATAATCTGGAAGGAAGGAAATCAAAATCAATGGGAGCAGGCTCATGTTTTTAATGTACATAAGTCTTCGGTGAACTCCATTGCCTGGGCACCCCACGAACTTGGCCTCTGCTTGGCATGTGGATCGTCCGATGGAAGTATTTCAGTCTTTATTGCTAGATCTGATGGTGGCTGGGACAATAATCAAATTGAACAAGCCCACTCAGTTGGAGTAACCTCAGTTTCATGGGGCCCTACGACGGCTCCAGGTTCCTTAGTTGGATCCAGTTCGGTGGACCCTGTTTGGAAGCTGGCTTCTGGGGGCTTTGATAGTACGGTGAAGGTGTGGACGCTTAAAGATGGAAGCTGGAGGAGGGATTCCCCTCCTGCCATTCAAATGCACACTGATTGGGTGAGGGATGTAGCTTGGTCACCGAACCTAGGGCTTCAAAAGTCCTCCATTGCAAGTGGTTCCCAGGATGGGACAGTGATTATTTGGTCTGTTGCAAAGGAAGGAGGGAGATGGGAAGGCACAGTGATGAATGATTTCAAGACTCCAGTCTGGAAGGTTTCATGGTCATTGACCGGGGACTTATTGGCTGTTGCTGACGGGAATAACAATGTTACATTGTGGAAAGAAGCAGTTGGTGGTAAATGGCAGCAAGTAACTACAGTTTAGCCTTAAGGTTACTCATTTTTAGTCTTTAATTATCTTTTCATTATGTTTTGTGTCTTGCGAGGAGCATGTTGTTCAATATTGTTAAACAATTTCTCTGTATTTTAGTTCACAATATTTGTTATCATTGCATGTTTTCATAACTTAATCAGATTTTGGGGGTGTGGCAACACTAATATGTTCAGGTTTTATTAAATATTCTCTGGTTCTGGCTT

Coding sequence (CDS)

ATGTCTTCCCAGAAGATTGAAACTGGCCACCAAGATATGGTTCATGATGTACAGATGGATTACTATGGAAAGCGCATTGCGACAGCTTCCTCTGATTTTACCATTAAAATTATTAGTGTTTGCAAAAACTCTGGTTCACAACTCTTAGCTTCATTGAGTGGTCATAAAGGCCCAGTTTGGCAAGTTGCTTGGGCACACCCAAAGTTTGGTTCATTGCTAGCGTCCAGCTCTTACGATGGTCAAGTGATAATCTGGAAGGAAGGAAATCAAAATCAATGGGAGCAGGCTCATGTTTTTAATGTACATAAGTCTTCGGTGAACTCCATTGCCTGGGCACCCCACGAACTTGGCCTCTGCTTGGCATGTGGATCGTCCGATGGAAGTATTTCAGTCTTTATTGCTAGATCTGATGGTGGCTGGGACAATAATCAAATTGAACAAGCCCACTCAGTTGGAGTAACCTCAGTTTCATGGGGCCCTACGACGGCTCCAGGTTCCTTAGTTGGATCCAGTTCGGTGGACCCTGTTTGGAAGCTGGCTTCTGGGGGCTTTGATAGTACGGTGAAGGTGTGGACGCTTAAAGATGGAAGCTGGAGGAGGGATTCCCCTCCTGCCATTCAAATGCACACTGATTGGGTGAGGGATGTAGCTTGGTCACCGAACCTAGGGCTTCAAAAGTCCTCCATTGCAAGTGGTTCCCAGGATGGGACAGTGATTATTTGGTCTGTTGCAAAGGAAGGAGGGAGATGGGAAGGCACAGTGATGAATGATTTCAAGACTCCAGTCTGGAAGGTTTCATGGTCATTGACCGGGGACTTATTGGCTGTTGCTGACGGGAATAACAATGTTACATTGTGGAAAGAAGCAGTTGGTGGTAAATGGCAGCAAGTAACTACAGTTTAG

Protein sequence

MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVWQVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCLACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLASGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVIIWSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV

Homology

[Close]

BLAST of Sed0000610 vs. NCBI nr
Match: XP_022933529.1 (protein transport protein SEC13 homolog B-like [Cucurbita moschata])

HSP 1 Score: 599.4 bits (1544), Expect = 1.8e-167
Identity = 285/300 (95.00%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MSS KIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISV KNS SQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSL+GSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSVAKEGG+WEG VMNDFKTP+WKVSWSLTGDLLAVADGNN VTLWKEAV GKWQQVT V
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQQVTKV 300

[Close]

BLAST of Sed0000610 vs. NCBI nr
Match: KAG6588399.1 (Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 597.8 bits (1540), Expect = 5.1e-167
Identity = 284/300 (94.67%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MSS KIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISV KNS SQLLASLSGHKGPVW
Sbjct: 83  MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 142

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 143 QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFNAHKSSVNSIAWAPHELGLCL 202

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSL+GSSSVDPVWKLA
Sbjct: 203 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 262

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGL+KS+IASGSQDGTVII
Sbjct: 263 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLKKSNIASGSQDGTVII 322

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSVAKEGG+WEG VMNDFKTP+WKVSWSLTGDLLAVADGNN VTLWKEAV GKWQQVT V
Sbjct: 323 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQQVTKV 382

[Close]

BLAST of Sed0000610 vs. NCBI nr
Match: XP_023531332.1 (protein transport protein SEC13 homolog B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597.4 bits (1539), Expect = 6.7e-167
Identity = 284/300 (94.67%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MSS KIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISV KNS SQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQW QAHVF+ HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFSAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSL+GSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSVAKEGG+WEG VMNDFKTP+WKVSWSLTGDLLAVADGNN VTLWKEAV GKWQQVT V
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQQVTKV 300

[Close]

BLAST of Sed0000610 vs. NCBI nr
Match: XP_022971254.1 (protein transport protein SEC13 homolog B-like [Cucurbita maxima])

HSP 1 Score: 594.0 bits (1530), Expect = 7.4e-166
Identity = 283/300 (94.33%), Postives = 288/300 (96.00%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MSS KIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISV K S SQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKKSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQ QW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQYQWVQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSL+GSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSVAKEGG+WEG VMNDFKTP+WKVSWSLTGDLLAVADGNN VTLWKEAV GKWQQVT V
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQQVTKV 300

[Close]

BLAST of Sed0000610 vs. NCBI nr
Match: XP_022983840.1 (protein transport protein SEC13 homolog B-like [Cucurbita maxima])

HSP 1 Score: 587.4 bits (1513), Expect = 6.9e-164
Identity = 275/300 (91.67%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MS+QKIETGHQDMVHDVQMDY+GKRIATASSDFTIKIISV KNS SQLLA+L+GH+GPVW
Sbjct: 1   MSAQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGS++ASSSYDGQVIIWKEGNQNQW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMIASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+NQIEQAH VGVTSVSWGPTTAPGSLVGS SVDPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPTTAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSV K+GG+WEGTVMNDFKTP+WKVSWSLTGDLLAVADGNN+ TLWKEAV GKWQQVTTV
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGDLLAVADGNNHFTLWKEAVDGKWQQVTTV 300

[Close]

BLAST of Sed0000610 vs. ExPASy Swiss-Prot
Match: O64740 (Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC13B PE=1 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 1.4e-138
Identity = 227/300 (75.67%), Postives = 261/300 (87.00%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           M  QKIETGH+D+VHDVQMDYYGKRIATASSD TIKI  V  N GSQ LA+L+GH+GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           +VAWAHPK+GS+LAS SYDGQVI+WKEGNQNQW Q HVF  HKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDG+ISVF AR+DGGWD ++I+QAH VGVTSVSW P TAPG+LV S  +DPV+KLA
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGG D+TVKVW L +GSW+ D  PA+Q HTDWVRDVAW+PNLGL KS+IASGSQDG VII
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           W+V KEG +WEG V+ DF TPVW+VSWSLTG+LLAV+DGNNNVT+WKEAV G+W+QVT V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

[Close]

BLAST of Sed0000610 vs. ExPASy Swiss-Prot
Match: Q9SRI1 (Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC13A PE=1 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 7.5e-137
Identity = 223/300 (74.33%), Postives = 256/300 (85.33%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           M  QKIETGH D +HDV MDYYGKR+ATASSD TIKI  V  + GSQ LA+L+GH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLAS SYDGQ+I+WKEGNQNQW QAHVF  HK SVNSIAWAPHELGL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACG+SDG+ISVF AR+DGGWD  +I+QAH VGVTSVSW P T PG+LV S  +DPV+KLA
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGG DSTVKVW   +GSW+ D  PA+  HTDWVRDVAW+PNLGL KS+IASGS+DG VII
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           W++ KEG +WEGTV+ DFKTPVW+VSWSLTG+LLAV+DGNNNVT+WKE+V G+W+QVT V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

[Close]

BLAST of Sed0000610 vs. ExPASy Swiss-Prot
Match: Q9D1M0 (Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3)

HSP 1 Score: 322.8 bits (826), Expect = 4.2e-87
Identity = 152/300 (50.67%), Postives = 207/300 (69.00%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V +N G  L+A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILIADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G++LAS SYD +VIIWKE N   WE+ H  + H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSS---VDPVWKLASG 185
           DG+IS+     +G W+  +I  AH++G  +VSW P   PGSL+   S    + + K ASG
Sbjct: 128 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSTVKVW-TLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    ++ H+DWVRDVAW+P++GL  S+IAS SQDG V IW
Sbjct: 188 GCDNLIKLWREEEDGQWKEEQ--KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 247

Query: 246 SV-AKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 301
           +     G  W   +++ F   VW VSWS+T ++LAV+ G+N VTLWKE+V G+W  ++ V
Sbjct: 248 TCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0000610 vs. ExPASy Swiss-Prot
Match: Q5XFW8 (Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.2e-87
Identity = 152/300 (50.67%), Postives = 207/300 (69.00%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V +N G  L+A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILIADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G++LAS SYD +VIIWKE N   WE+ H  + H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSS---VDPVWKLASG 185
           DG+IS+     +G W+  +I  AH++G  +VSW P   PGSL+   S    + + K ASG
Sbjct: 128 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSTVKVW-TLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    ++ H+DWVRDVAW+P++GL  S+IAS SQDG V IW
Sbjct: 188 GCDNLIKLWREEEDGQWKEEQ--KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 247

Query: 246 SV-AKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 301
           +     G  W   +++ F   VW VSWS+T ++LAV+ G+N VTLWKE+V G+W  ++ V
Sbjct: 248 TCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0000610 vs. ExPASy Swiss-Prot
Match: Q3ZCC9 (Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.6e-86
Identity = 151/300 (50.33%), Postives = 205/300 (68.33%), Query Frame = 0


Query: 6   IETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVWQVAWA 65
           ++T H+DM+HD QMDYYG R+AT SSD ++KI  V +N G  L+A L GH+GPVWQVAWA
Sbjct: 8   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILVADLRGHEGPVWQVAWA 67

Query: 66  HPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCLACGSS 125
           HP +G++LAS SYD +VIIWKE N   WE+ H    H SSVNS+ WAPH+ GL LACGSS
Sbjct: 68  HPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSS 127

Query: 126 DGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSS---VDPVWKLASG 185
           DG+IS+      G W+  +I  AH++G  +VSW P   PGSL+   S    + + K ASG
Sbjct: 128 DGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASG 187

Query: 186 GFDSTVKVW-TLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVIIW 245
           G D+ +K+W   +DG W+ +    ++ H+DWVRDVAW+P++GL  S+IAS SQDG V +W
Sbjct: 188 GCDNLIKLWKEEEDGQWKEEQ--KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVW 247

Query: 246 SV-AKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 301
           +     G  W   +++ F   VW VSWS+T ++LAV+ G+N VTLWKE+V G+W  ++ V
Sbjct: 248 TCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of Sed0000610 vs. ExPASy TrEMBL
Match: A0A6J1F006 (protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111440929 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 8.5e-168
Identity = 285/300 (95.00%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MSS KIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISV KNS SQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKNSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWVQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSL+GSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSVAKEGG+WEG VMNDFKTP+WKVSWSLTGDLLAVADGNN VTLWKEAV GKWQQVT V
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQQVTKV 300

[Close]

BLAST of Sed0000610 vs. ExPASy TrEMBL
Match: A0A6J1I814 (protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111470029 PE=3 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 3.6e-166
Identity = 283/300 (94.33%), Postives = 288/300 (96.00%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MSS KIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISV K S SQLLASLSGHKGPVW
Sbjct: 1   MSSHKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVSKKSDSQLLASLSGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLASSSYDGQVIIWKEGNQ QW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQYQWVQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSL+GSSSVDPVWKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLIGSSSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSVAKEGG+WEG VMNDFKTP+WKVSWSLTGDLLAVADGNN VTLWKEAV GKWQQVT V
Sbjct: 241 WSVAKEGGKWEGIVMNDFKTPIWKVSWSLTGDLLAVADGNNTVTLWKEAVDGKWQQVTKV 300

[Close]

BLAST of Sed0000610 vs. ExPASy TrEMBL
Match: A0A6J1J720 (protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111482335 PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.3e-164
Identity = 275/300 (91.67%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MS+QKIETGHQDMVHDVQMDY+GKRIATASSDFTIKIISV KNS SQLLA+L+GH+GPVW
Sbjct: 1   MSAQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGS++ASSSYDGQVIIWKEGNQNQW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMIASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+NQIEQAH VGVTSVSWGPTTAPGSLVGS SVDPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPTTAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSV K+GG+WEGTVMNDFKTP+WKVSWSLTGDLLAVADGNN+ TLWKEAV GKWQQVTTV
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGDLLAVADGNNHFTLWKEAVDGKWQQVTTV 300

[Close]

BLAST of Sed0000610 vs. ExPASy TrEMBL
Match: A0A6J1FB15 (protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=LOC111442431 PE=3 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.8e-162
Identity = 273/300 (91.00%), Postives = 286/300 (95.33%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MS QKIETGHQDMVHDVQMDY+GKRIATASSDFTIKIISV KNS SQLLA+L+GH+GPVW
Sbjct: 1   MSEQKIETGHQDMVHDVQMDYFGKRIATASSDFTIKIISVSKNSASQLLATLNGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGS++ASSSYDGQVIIWKEGNQNQW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVAWAHPKFGSMVASSSYDGQVIIWKEGNQNQWLQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDG ISVFIARSDGGWD+NQIEQAH VGVTSVSWGP TAPGSLVGS SVDPVWKLA
Sbjct: 121 ACGSSDGDISVFIARSDGGWDSNQIEQAHPVGVTSVSWGPITAPGSLVGSGSVDPVWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTLKDGSWRRDS PA+QMHTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLKDGSWRRDSSPALQMHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSV K+GG+WEGTVMNDFKTP+WKVSWSLTG LLAVADGNN+ TLWKEAV GKWQQVTTV
Sbjct: 241 WSVTKDGGKWEGTVMNDFKTPIWKVSWSLTGHLLAVADGNNHFTLWKEAVDGKWQQVTTV 300

[Close]

BLAST of Sed0000610 vs. ExPASy TrEMBL
Match: A0A6J1D8M4 (protein transport protein SEC13 homolog B OS=Momordica charantia OX=3673 GN=LOC111018387 PE=3 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 5.9e-161
Identity = 272/300 (90.67%), Postives = 288/300 (96.00%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           MSSQKIETGHQDMVHDVQMDYYGKRIATASSD +I IISV KN+GSQ+LA+L+GHKGPVW
Sbjct: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDNSINIISVSKNTGSQILATLNGHKGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QV+WAHPKFGS+LASSSYDGQVIIWKEGNQNQW QAHVFN HKSSVNSIAWAPHELGLCL
Sbjct: 61  QVSWAHPKFGSMLASSSYDGQVIIWKEGNQNQWTQAHVFNAHKSSVNSIAWAPHELGLCL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSS VDP+WKLA
Sbjct: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSLVDPLWKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGGFDSTVKVWTL+DG WRRDS  ++ +HTDWVRDVAWSPNLGLQKS+IASGSQDGTVII
Sbjct: 181 SGGFDSTVKVWTLQDGIWRRDS--SLALHTDWVRDVAWSPNLGLQKSTIASGSQDGTVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           WSV KEGG+WEGTV+NDFKTP+WKVSWSLTGDLLAVADGNNNVTLWKEAV GKWQQVTTV
Sbjct: 241 WSVGKEGGKWEGTVLNDFKTPIWKVSWSLTGDLLAVADGNNNVTLWKEAVDGKWQQVTTV 298

[Close]

BLAST of Sed0000610 vs. TAIR 10
Match: AT2G30050.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 493.8 bits (1270), Expect = 9.7e-140
Identity = 227/300 (75.67%), Postives = 261/300 (87.00%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           M  QKIETGH+D+VHDVQMDYYGKRIATASSD TIKI  V  N GSQ LA+L+GH+GPVW
Sbjct: 1   MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           +VAWAHPK+GS+LAS SYDGQVI+WKEGNQNQW Q HVF  HKSSVNSIAWAPH++GL L
Sbjct: 61  EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACGSSDG+ISVF AR+DGGWD ++I+QAH VGVTSVSW P TAPG+LV S  +DPV+KLA
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGG D+TVKVW L +GSW+ D  PA+Q HTDWVRDVAW+PNLGL KS+IASGSQDG VII
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           W+V KEG +WEG V+ DF TPVW+VSWSLTG+LLAV+DGNNNVT+WKEAV G+W+QVT V
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAV 300

[Close]

BLAST of Sed0000610 vs. TAIR 10
Match: AT3G01340.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 488.0 bits (1255), Expect = 5.3e-138
Identity = 223/300 (74.33%), Postives = 256/300 (85.33%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           M  QKIETGH D +HDV MDYYGKR+ATASSD TIKI  V  + GSQ LA+L+GH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLAS SYDGQ+I+WKEGNQNQW QAHVF  HK SVNSIAWAPHELGL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACG+SDG+ISVF AR+DGGWD  +I+QAH VGVTSVSW P T PG+LV S  +DPV+KLA
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGG DSTVKVW   +GSW+ D  PA+  HTDWVRDVAW+PNLGL KS+IASGS+DG VII
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           W++ KEG +WEGTV+ DFKTPVW+VSWSLTG+LLAV+DGNNNVT+WKE+V G+W+QVT V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

[Close]

BLAST of Sed0000610 vs. TAIR 10
Match: AT3G01340.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 488.0 bits (1255), Expect = 5.3e-138
Identity = 223/300 (74.33%), Postives = 256/300 (85.33%), Query Frame = 0


Query: 1   MSSQKIETGHQDMVHDVQMDYYGKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVW 60
           M  QKIETGH D +HDV MDYYGKR+ATASSD TIKI  V  + GSQ LA+L+GH+GPVW
Sbjct: 1   MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60

Query: 61  QVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPHELGLCL 120
           QVAWAHPKFGSLLAS SYDGQ+I+WKEGNQNQW QAHVF  HK SVNSIAWAPHELGL L
Sbjct: 61  QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120

Query: 121 ACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVDPVWKLA 180
           ACG+SDG+ISVF AR+DGGWD  +I+QAH VGVTSVSW P T PG+LV S  +DPV+KLA
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180

Query: 181 SGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQDGTVII 240
           SGG DSTVKVW   +GSW+ D  PA+  HTDWVRDVAW+PNLGL KS+IASGS+DG VII
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240

Query: 241 WSVAKEGGRWEGTVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTLWKEAVGGKWQQVTTV 300
           W++ KEG +WEGTV+ DFKTPVW+VSWSLTG+LLAV+DGNNNVT+WKE+V G+W+QVT V
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVV 300

[Close]

BLAST of Sed0000610 vs. TAIR 10
Match: AT5G67320.1 (WD-40 repeat family protein )

HSP 1 Score: 79.0 bits (193), Expect = 7.4e-15
Identity = 76/303 (25.08%), Postives = 128/303 (42.24%), Query Frame = 0


Query: 23  GKRIATASSDFTIKIISVCKNSGSQLLASLSGHKGPVWQVAWAHPKFGSLLASSSYDGQV 82
           G  +AT S D   +I ++      +L+++LS HKGP++ + W   K G  L + S D   
Sbjct: 336 GTLLATGSCDGQARIWTL----NGELISTLSKHKGPIFSLKW--NKKGDYLLTGSVDRTA 395

Query: 83  IIWKEGNQNQWEQ---------------------------------------AHVFNVHK 142
           ++W +    +W+Q                                       A  F  H+
Sbjct: 396 VVW-DVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQ 455

Query: 143 SSVNSIAWAPHELGLCLACGSSDGSISVF-IARSDGGWDNNQIEQAHSVGVTSVSWGPTT 202
             VN + W P   G  LA  S D +  ++ I +S    D  +    H+  + ++ W PT 
Sbjct: 456 GEVNCVKWDP--TGSLLASCSDDSTAKIWNIKQSTFVHDLRE----HTKEIYTIRWSPTG 515

Query: 203 APGSLVGSSSVDPVWKLASGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNL 262
                 G+++ +    LAS  FDSTVK+W  + G        +   H + V  +A+SPN 
Sbjct: 516 P-----GTNNPNKQLTLASASFDSTVKLWDAELGKML----CSFNGHREPVYSLAFSPN- 575

Query: 263 GLQKSSIASGSQDGTVIIWSVAKEGGRWEGTVMNDF--KTPVWKVSWSLTGDLLAVADGN 284
                 IASGS D ++ IWS+       EG ++  +     +++V W+  G+ +A    +
Sbjct: 576 ---GEYIASGSLDKSIHIWSIK------EGKIVKTYTGNGGIFEVCWNKEGNKIAACFAD 606

[Close]

BLAST of Sed0000610 vs. TAIR 10
Match: AT2G26060.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-13
Identity = 74/304 (24.34%), Postives = 121/304 (39.80%), Query Frame = 0


Query: 4   QKIETGHQDMVHDV-------QMDYYGKRIATASSDFTIKIISVCKNSGSQLLASL--SG 63
           QK+E GH D V  V         D     +A+ S D T++I      S S    ++    
Sbjct: 14  QKLE-GHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 73

Query: 64  HKGPVWQVAWAHPKFGSLLASSSYDGQVIIWKEGNQNQWEQAHVFNVHKSSVNSIAWAPH 123
           H   V   AW+    G LLA++S+DG   IWK    +++E       H++ V S++W  +
Sbjct: 74  HTRTVRSCAWS--PSGQLLATASFDGTTGIWKNYG-SEFECISTLEGHENEVKSVSW--N 133

Query: 124 ELGLCLACGSSDGSISVFIARSDGGWDNNQIEQAHSVGVTSVSWGPTTAPGSLVGSSSVD 183
             G CLA  S D S+ ++       +D   +   H+  V  V W PT             
Sbjct: 134 ASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPT------------- 193

Query: 184 PVWKLASGGFDSTVKVWTLKDGSWRRDSPPAIQMHTDWVRDVAWSPNLGLQKSSIASGSQ 243
            +  L S  +D+T+KVW  +D          +    +      WS +       + + S 
Sbjct: 194 -MDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSD 253

Query: 244 DGTVIIWSV-------AKEGGRWEG--TVMNDFKTPVWKVSWSLTGDLLAVADGNNNVTL 290
           D T+ IW          +E   W    T+       ++   WS   D++A   G+N + L
Sbjct: 254 DLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWS-RDDIIASGAGDNAIRL 296

The following BLAST results are available for this feature:

BLAST of Sed0000610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933529.1	1.8e-167	95.00	protein transport protein SEC13 homolog B-like [Cucurbita moschata]	[more]
KAG6588399.1	5.1e-167	94.67	Protein transport protein SEC13-like B, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_023531332.1	6.7e-167	94.67	protein transport protein SEC13 homolog B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971254.1	7.4e-166	94.33	protein transport protein SEC13 homolog B-like [Cucurbita maxima]	[more]
XP_022983840.1	6.9e-164	91.67	protein transport protein SEC13 homolog B-like [Cucurbita maxima]	[more]

BLAST of Sed0000610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64740	1.4e-138	75.67	Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9SRI1	7.5e-137	74.33	Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9D1M0	4.2e-87	50.67	Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3	[more]
Q5XFW8	4.2e-87	50.67	Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1	[more]
Q3ZCC9	4.6e-86	50.33	Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1	[more]

BLAST of Sed0000610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F006	8.5e-168	95.00	protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1I814	3.6e-166	94.33	protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1J720	3.3e-164	91.67	protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FB15	1.8e-162	91.00	protein transport protein SEC13 homolog B-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1D8M4	5.9e-161	90.67	protein transport protein SEC13 homolog B OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Sed0000610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30050.1	9.7e-140	75.67	transducin family protein / WD-40 repeat family protein	[more]
AT3G01340.1	5.3e-138	74.33	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G01340.2	5.3e-138	74.33	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G67320.1	7.4e-15	25.08	WD-40 repeat family protein	[more]
AT2G26060.2	4.1e-13	24.34	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 229..243 score: 36.8 coord: 179..193 score: 39.89 coord: 73..87 score: 35.16
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 2..39 e-value: 0.2 score: 20.7 coord: 45..86 e-value: 2.2E-7 score: 40.5 coord: 139..192 e-value: 0.25 score: 20.4 coord: 200..242 e-value: 4.4E-5 score: 32.9 coord: 248..287 e-value: 0.88 score: 17.4 coord: 92..133 e-value: 0.0022 score: 27.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 95..131 e-value: 0.015 score: 16.2 coord: 209..242 e-value: 7.3E-4 score: 20.3 coord: 5..37 e-value: 0.077 score: 13.9 coord: 47..86 e-value: 5.6E-5 score: 23.8 coord: 147..191 e-value: 0.044 score: 14.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 52..86 score: 10.976305
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 206..243 score: 11.64467
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..300 e-value: 1.8E-93 score: 315.0
None	No IPR available	PANTHER	PTHR11024:SF17	PROTEIN TRANSPORT PROTEIN SEC13 HOMOLOG B-LIKE ISOFORM X1	coord: 1..300
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 206..243 score: 9.731054
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 52..86 score: 9.203785
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 1..300
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 8..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000610.1	Sed0000610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090114	COPII-coated vesicle budding
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0031080	nuclear pore outer ring
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity