Sed0000477 (gene) Chayote v1

Overview


Name	Sed0000477
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein TIC 56, chloroplastic
Location	LG04: 21656342 .. 21660879 (-)
RNA-Seq Expression	Sed0000477
Synteny	Sed0000477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATCCACTTTCTGACTCCTCCGCCAGTCCTCCATTTTCAGGGAGATAGAGCAGCTCTGTTTCGGTCCAAAGCCCTAGTTTGATTGCCAGAAATCTCTGCGTTTTAACATCTTCGAACCACAGTAATGGCGTCCATCAACTTCAACCCCTTCGACAGCTGGTTCTCCAAACGCCCTAATCCAATCCTTCCTCTCAATCTCACTGCGTTTCGAGAATCCCTGTCTCAAAAGTCCCCATCATCTCCCAATTTCGCTTCAACCAGCATTTCCAACATCTTCAAAAAGCCGAAGAAACCAGAGAAAGCGCCCGATGAACCAGGGTACTACGGCAAAATGCTGGAGCAGTTCTACTGGGAATGCGACAACTTACCCGATTACAGACACACTCCCGAGGTTGAGAAAATCTTGAAGGAAGATCCCGTTTTCGAGAATAAGGAGAATCCGACAGAGGAGGAGCTGGAGAAGAACGAGAAGCTTTGGAAAGCGATACGAGAGAGCCCTGTTGTGAAATTTCTGGAGCGTGCGGAGGAAATTGCAGCCAAATACAACGAATTAGAGCTCAAAGAGAATGAGAATCCTTACAGAAAGGAGGATAGGAAGCTATGGAAGGCGATTCCCCATGTGACTGGGCTTGATGGCCGGCCTATGCCCAGGAAAGCTATAAAGACCAAAAAGGAATCCGATGATAAGTTTTGGGATTTTGCGAGGCAGTTCTTTTTTGGCCTTTGGGGCTTCCGGCAAAGACCTTATCCACCCGGTCGCCCCATCGATGTTGCGCAGGCCATTGGTTATAAGCAACTCGAAAAGCGGTATTATGATTGTAAGTCTAAACTGATGATCATTGGAAGAATGTGCTTTCATTTTCAATTTACCTAGTTTTTTCTTGAGTTGAGGAAGCCACATTGACATGGGCTATCTCAGTTTCATCATGATATGAGTTTTATTAGTGCTGCTATTTTTTTCTACTCAAGTCTTGGATCTTTACCGCATCACTCTGCGTTATCATGAATTCTTCTTGTAGTATTCCTACTTCTACGGTGTTTGATAAACCCCGTATAACCTACTCTTAACCTACTATTAGCATGCTTGTTTGTCTTTTTTAATCCGCGACTATCCAAACCAGCTAAAGTGCACCTCGACTATTGTTATTGGACAAACTGTTTGACCCTACAGAAAACCCATAGGAAATTAATTGTTAGGTAGGTGGTCATCATAATTGAAGCCATCATCATCATCTCTTAGTTATTTAAGGCCCTCCTGACCACTTGAGGATTGTTTATGATTGTTTGTTGTTTCCACTCCGCAGTTATCATGAAGAGTGGAGGTTGGTACTATAAGGATCGGTTGGGTCGTACTCGGGGACCACTGGAACTAATTACTCTTAAAACAGCTTGGGGAGGTGGGATTATTGACAAGGACACATTTATCTGGGGAGATGACATGGACGAATGGGCACCAATTCACATGGTTTATGGATTGGAGCGTGCAATTGCCACTTGGGAAGGTCAGTTAAACTTCTATGTTCATCTTTTCATTTTCTTCGTCAGGTATGAAGTTGAAGGCTACCTTTTCATTGGCCGAAGAAATTAGCCCTGAATTTGTATCGTCATTGTATGCTTAGTTTGAACACTAATTAATAATTATTAAATGGTTTTGAAATGGATCAACATTGGACACACTACAGAATCACAGATCGAGGCCTGAGGGCTTTCTATATTAGTTCATTGAAGACATATCACGAATGGAACTTGAGCATGCTTCTTTTCCTTTAAGCCTTTACGATGGCTACATCATGACAATCAAATTAATAACATGACATGTGATGTGATGAGCAAAGCTTTTCAGTGCATGCTCGTTTTGGCAATTAAAGACACCCCAGCCTTCTCTAATAGGTTGCTCCCTACCTGATGTAGGAATCTATTATCAGCTGGATTTCCAACAAAGAGGAACAAAGACTACTTATTTGAGCATCTTAAATTATAGTCTGAATAGTATTCAGTGAAGATTAAAAAAACGCTCTAGAATACATCTGCTTGTTTACATCCTATATTCCTCAAATGTAACACTAGCTAACCAATCTAGAATTTGTTGTACAGTACTAGTAAAGCAAAATGGCAAGTTTTTTATGTGGAAGTTTTGGTGTTTCTTGTTCAGGCTCTTATTTAGTTTTTCCTGTGCTTTGTTCGGAGCAGTTTTGGTTCTTAGTTTCGATTACTGTTTTTATTTTGTCTTGCTTTCTTTAACTTCTTCTTGAATCTCGTTTCCCTTGATCAATAGCCTATTTCAAGATAATAAAACGTAAAAGGAAATGTTAAATGAATTCCATTGATGCCATATCCTAATGATCCACTTCTGGTCATGTTTCATCAAATTGTTAGCAATATAGAAATTAAAATCTTAGTGATGTCGGATGGCATACTGCAATTATTTTTGTGCCTTTTCCCATCTCTACGAATGTCTTGGAAAGCTAGCTAAGCTCGAGGCCATATAAAGAAGAATCATCAATCCATAGTCATCAATATTACTCAAATTGGTGCTTACTGTATTTGTGGCTAGCTGCGTTCAATACAGTTCTTAATTTTATGTTCTTATTGTGTTTGTCACAGCTCTTTTTTAGTTACCACCATGCACTGTTTGCCTCCTGTTCATCTAGTTGATTTATTAACAGCCATACTTACATTTATGTTACAAAAAGGTTTACTGGCTCACAATTGTTTATACAGTTAGGCTCGGTGCGGCTGCCACTGCTTTCCTTCACAAATTGCAGAAAGGGATTCCTCCATGGGTTCCTCTTAAAGGACACGAGAAGAAATCCTACAAGCAACTGCAACAAGAAGCTTTAGAGAGCAGGAGACGAGATCTAGCAGTGCTAGAAGCTAATGACGGTGTTTGGCCAGGAGTTAGAATTCCTAGTCACGCACTGTTTCTATGGGCCAGTGGAACTGAGCTGACGTCTATCTTGGAGGCAGATCACATGCCAAACAAGTACATCCCTAGGGATCTAAGGTACATCAACAAACCCGACATTCTGTTCATTCTGTCTCCATCATGGGTAGTTTAGTGGTTGAAAGGGCATTAATAAACCAAAAGGTCGTGGGTTCAATTCATGATAACTATCAAGTTAGGAATTAATTTTATACAGGTTTCCTTGACGCTCTAAATGTTGTAGTATCAAATGGTATGTCTCGTGAGAACAGTCGAAGTTCATGCAAGTTAGTCTAGATAATTACGGATATAAAAAGACAGTACAATTGAAGTTATGAAATTTCACTTGAGAGTCTTGGTCACCGATGATGAAAGATCTAGGTGGATTAGCAAATGTATATATTTATTGTACACTTCAAATAAGACCGTACCATTGAAGTGTATGAAATGTTTAGTTTGTCTTTAGGTTAGTTTGTTCTTCATTTATGTATGAAATGAAGAAGTTTATTTTCCTTGAATAGATCATTCCAGTTCCGAGGTTGAAGTTTTCTTCTTAACATCGGCCATTGCAGCAATGCTTTTTTGATATATTTTCTTATTCTAGAGATTATTTCTTCATAGATTCTTATATATGTGCCATGGTTGCCTGTGCCTGGTAGGTACAAGTTAGCTAAAATTATACCCGGGTTAAGACCGTGGGAGGTTCTCAGTGTTGAGCAAGCAATGCAACAAATAACATACAATGGCGAATGGCATCGTGAACCTTTAGGGACATACACGACTGGGCCTCCATACATCAGGCATTGGAATAAAGATGTTCTGGTATAGTACTTGCACTTTCACATTCTTATGAAGTTCACTGATCTCGAATTCTTTAACCCTTCGTGCAATAGCCAAATAGAAATCCACCTGCTCAGTTTACAGCAGTTTGTGTTGTATGACAAAATATTTGTCTTTTTCTTGCAGAGATTGTTTCAGATATTCTACCAACTCAGCAACCAAGTTTACAATAAATTGGAACGGACGGTTCCTGGTTTCAATAAAGTAATGGAGAAGGTTGAGGCTGATGTTGATGCCAGATATACTAGGCGGAACGAGAAGAGAGAGGCAATGAAAAGAGCTGAATACGAGAGAGATCAACGGCCGAGTTAGAAACGATCGATAAATTATGGTTGTTATTATTGTCTAATAACATGGCCAAGTTAAGCAACAGCTAAGGAAATGTGGGTGATATCCAATTCCCCCCCCCAAAAAAAAAAATCTATTTTTTGTGTAAACTTGCTTGTAGTTTTCACATGGGTGAGTGGCCTTCCTCTTCTGAAATGGATTAGGAAACTCAGATCTTTATTTACCACCAAAAAACACCATTTGGTTTTGTTTGTAATGCTCATTCGTAGTTTCAAATGAAGACAGTTGGTCCTAGTATGCACAAAACGCTTTGGATGGCATTTTATAAAAATACTTGTGCTGCTGAACTTTATTAGTCTTTTATATTTTAGTTTACAATAGTAGTTGTGATTTCAATTTTGTAAACCCTTGGATTCAAAATTTTATTTTGTAATAATTTAATCTTTGTAGCAGTTTAATCTCTATGGTGAATATTTTTGCTAAA

mRNA sequence

GTTTATCCACTTTCTGACTCCTCCGCCAGTCCTCCATTTTCAGGGAGATAGAGCAGCTCTGTTTCGGTCCAAAGCCCTAGTTTGATTGCCAGAAATCTCTGCGTTTTAACATCTTCGAACCACAGTAATGGCGTCCATCAACTTCAACCCCTTCGACAGCTGGTTCTCCAAACGCCCTAATCCAATCCTTCCTCTCAATCTCACTGCGTTTCGAGAATCCCTGTCTCAAAAGTCCCCATCATCTCCCAATTTCGCTTCAACCAGCATTTCCAACATCTTCAAAAAGCCGAAGAAACCAGAGAAAGCGCCCGATGAACCAGGGTACTACGGCAAAATGCTGGAGCAGTTCTACTGGGAATGCGACAACTTACCCGATTACAGACACACTCCCGAGGTTGAGAAAATCTTGAAGGAAGATCCCGTTTTCGAGAATAAGGAGAATCCGACAGAGGAGGAGCTGGAGAAGAACGAGAAGCTTTGGAAAGCGATACGAGAGAGCCCTGTTGTGAAATTTCTGGAGCGTGCGGAGGAAATTGCAGCCAAATACAACGAATTAGAGCTCAAAGAGAATGAGAATCCTTACAGAAAGGAGGATAGGAAGCTATGGAAGGCGATTCCCCATGTGACTGGGCTTGATGGCCGGCCTATGCCCAGGAAAGCTATAAAGACCAAAAAGGAATCCGATGATAAGTTTTGGGATTTTGCGAGGCAGTTCTTTTTTGGCCTTTGGGGCTTCCGGCAAAGACCTTATCCACCCGGTCGCCCCATCGATGTTGCGCAGGCCATTGGTTATAAGCAACTCGAAAAGCGGTATTATGATTTTATCATGAAGAGTGGAGGTTGGTACTATAAGGATCGGTTGGGTCGTACTCGGGGACCACTGGAACTAATTACTCTTAAAACAGCTTGGGGAGGTGGGATTATTGACAAGGACACATTTATCTGGGGAGATGACATGGACGAATGGGCACCAATTCACATGGTTTATGGATTGGAGCGTGCAATTGCCACTTGGGAAGTTAGGCTCGGTGCGGCTGCCACTGCTTTCCTTCACAAATTGCAGAAAGGGATTCCTCCATGGGTTCCTCTTAAAGGACACGAGAAGAAATCCTACAAGCAACTGCAACAAGAAGCTTTAGAGAGCAGGAGACGAGATCTAGCAGTGCTAGAAGCTAATGACGGTGTTTGGCCAGGAGTTAGAATTCCTAGTCACGCACTGTTTCTATGGGCCAGTGGAACTGAGCTGACGTCTATCTTGGAGGCAGATCACATGCCAAACAAGTACATCCCTAGGGATCTAAGGTACAAGTTAGCTAAAATTATACCCGGGTTAAGACCGTGGGAGGTTCTCAGTGTTGAGCAAGCAATGCAACAAATAACATACAATGGCGAATGGCATCGTGAACCTTTAGGGACATACACGACTGGGCCTCCATACATCAGGCATTGGAATAAAGATGTTCTGAGATTGTTTCAGATATTCTACCAACTCAGCAACCAAGTTTACAATAAATTGGAACGGACGGTTCCTGGTTTCAATAAAGTAATGGAGAAGGTTGAGGCTGATGTTGATGCCAGATATACTAGGCGGAACGAGAAGAGAGAGGCAATGAAAAGAGCTGAATACGAGAGAGATCAACGGCCGAGTTAGAAACGATCGATAAATTATGGTTGTTATTATTGTCTAATAACATGGCCAAGTTAAGCAACAGCTAAGGAAATGTGGGTGATATCCAATTCCCCCCCCCAAAAAAAAAAATCTATTTTTTGTGTAAACTTGCTTGTAGTTTTCACATGGGTGAGTGGCCTTCCTCTTCTGAAATGGATTAGGAAACTCAGATCTTTATTTACCACCAAAAAACACCATTTGGTTTTGTTTGTAATGCTCATTCGTAGTTTCAAATGAAGACAGTTGGTCCTAGTATGCACAAAACGCTTTGGATGGCATTTTATAAAAATACTTGTGCTGCTGAACTTTATTAGTCTTTTATATTTTAGTTTACAATAGTAGTTGTGATTTCAATTTTGTAAACCCTTGGATTCAAAATTTTATTTTGTAATAATTTAATCTTTGTAGCAGTTTAATCTCTATGGTGAATATTTTTGCTAAA

Coding sequence (CDS)

ATGGCGTCCATCAACTTCAACCCCTTCGACAGCTGGTTCTCCAAACGCCCTAATCCAATCCTTCCTCTCAATCTCACTGCGTTTCGAGAATCCCTGTCTCAAAAGTCCCCATCATCTCCCAATTTCGCTTCAACCAGCATTTCCAACATCTTCAAAAAGCCGAAGAAACCAGAGAAAGCGCCCGATGAACCAGGGTACTACGGCAAAATGCTGGAGCAGTTCTACTGGGAATGCGACAACTTACCCGATTACAGACACACTCCCGAGGTTGAGAAAATCTTGAAGGAAGATCCCGTTTTCGAGAATAAGGAGAATCCGACAGAGGAGGAGCTGGAGAAGAACGAGAAGCTTTGGAAAGCGATACGAGAGAGCCCTGTTGTGAAATTTCTGGAGCGTGCGGAGGAAATTGCAGCCAAATACAACGAATTAGAGCTCAAAGAGAATGAGAATCCTTACAGAAAGGAGGATAGGAAGCTATGGAAGGCGATTCCCCATGTGACTGGGCTTGATGGCCGGCCTATGCCCAGGAAAGCTATAAAGACCAAAAAGGAATCCGATGATAAGTTTTGGGATTTTGCGAGGCAGTTCTTTTTTGGCCTTTGGGGCTTCCGGCAAAGACCTTATCCACCCGGTCGCCCCATCGATGTTGCGCAGGCCATTGGTTATAAGCAACTCGAAAAGCGGTATTATGATTTTATCATGAAGAGTGGAGGTTGGTACTATAAGGATCGGTTGGGTCGTACTCGGGGACCACTGGAACTAATTACTCTTAAAACAGCTTGGGGAGGTGGGATTATTGACAAGGACACATTTATCTGGGGAGATGACATGGACGAATGGGCACCAATTCACATGGTTTATGGATTGGAGCGTGCAATTGCCACTTGGGAAGTTAGGCTCGGTGCGGCTGCCACTGCTTTCCTTCACAAATTGCAGAAAGGGATTCCTCCATGGGTTCCTCTTAAAGGACACGAGAAGAAATCCTACAAGCAACTGCAACAAGAAGCTTTAGAGAGCAGGAGACGAGATCTAGCAGTGCTAGAAGCTAATGACGGTGTTTGGCCAGGAGTTAGAATTCCTAGTCACGCACTGTTTCTATGGGCCAGTGGAACTGAGCTGACGTCTATCTTGGAGGCAGATCACATGCCAAACAAGTACATCCCTAGGGATCTAAGGTACAAGTTAGCTAAAATTATACCCGGGTTAAGACCGTGGGAGGTTCTCAGTGTTGAGCAAGCAATGCAACAAATAACATACAATGGCGAATGGCATCGTGAACCTTTAGGGACATACACGACTGGGCCTCCATACATCAGGCATTGGAATAAAGATGTTCTGAGATTGTTTCAGATATTCTACCAACTCAGCAACCAAGTTTACAATAAATTGGAACGGACGGTTCCTGGTTTCAATAAAGTAATGGAGAAGGTTGAGGCTGATGTTGATGCCAGATATACTAGGCGGAACGAGAAGAGAGAGGCAATGAAAAGAGCTGAATACGAGAGAGATCAACGGCCGAGTTAG

Protein sequence

MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKAPDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKAIRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIKTKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWYYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIPSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYNGEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEADVDARYTRRNEKREAMKRAEYERDQRPS

Homology

[Close]

BLAST of Sed0000477 vs. NCBI nr
Match: XP_022145657.1 (protein TIC 56, chloroplastic [Momordica charantia])

HSP 1 Score: 951.4 bits (2458), Expect = 3.1e-273
Identity = 444/502 (88.45%), Postives = 483/502 (96.22%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           MASINFNPF++WFS+RPNPI PLNLTAFR+SLSQKS +SPNFASTS+SN FKK +KP+KA
Sbjct: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKKSQKPKKA 60

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
            DEPGYYGKMLEQF+WECDNLPDYRHTPEVEKIL EDPV +NKENP+EEE+EKNEKLWKA
Sbjct: 61  SDEPGYYGKMLEQFFWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           +R SPVV+FLERAEEIAAKYNELELKENENPYR ED+KLW+AIPHV GLDGRPMPRKAIK
Sbjct: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           TK+ES+DKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYK+LEKRYYDFIM+SGGWY
Sbjct: 181 TKRESEDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWG+DMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKGHEKK+YKQLQQEALES+RRDLAVL ANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASG+ELTSILEADHMPNKYIP+DLRYKLAKIIPGLRPWEVLSVEQAM+QITYN
Sbjct: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           GEWHREPLGTYTTGPPYIRHWNKDV R+F+IF+ LS +VYNK+ERT+PGF+K+M+KV+AD
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480

Query: 481 VDARYTRRNEKREAMKRAEYER 503
             AR  RR E+REA+KRAE+ER
Sbjct: 481 AAARDARRKERREALKRAEFER 502

[Close]

BLAST of Sed0000477 vs. NCBI nr
Match: XP_038905710.1 (protein TIC 56, chloroplastic [Benincasa hispida])

HSP 1 Score: 944.5 bits (2440), Expect = 3.8e-271
Identity = 444/502 (88.45%), Postives = 475/502 (94.62%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           MASINFNPF++WFS+RPNPI   NL AFR+SLSQKS  SPNFAS S+SN+FKK +KPEKA
Sbjct: 1   MASINFNPFENWFSRRPNPIPSHNLIAFRDSLSQKSSPSPNFASRSLSNVFKKRQKPEKA 60

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
            DEPGYYGKMLEQFYWEC+NLPDYRH PEVEKIL EDPVFENKENPT+EELEKNEKLWK 
Sbjct: 61  SDEPGYYGKMLEQFYWECENLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKG 120

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           IR+SPVVKFLERAEEIAAKYNELELKENENPYR ED+KLW+AIPHV GLDGRPMPRKAIK
Sbjct: 121 IRDSPVVKFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           TK+ESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYK+LEKRYYDFIM+SGGWY
Sbjct: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWG+DMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKK+YKQLQQEALES+RRDLAVL ANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASG+ELTS LEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAM+QITYN
Sbjct: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           GEWHREPLGTYTTGPPYIRHWNKDV R+F+ F+ LS +VYNK+ERT+PGF+K+MEKV+ D
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRTFFSLSTRVYNKMERTIPGFSKIMEKVQGD 480

Query: 481 VDARYTRRNEKREAMKRAEYER 503
             AR  RR E+REAMKRAE+ER
Sbjct: 481 AAARNARRKERREAMKRAEFER 502

[Close]

BLAST of Sed0000477 vs. NCBI nr
Match: XP_023527872.1 (protein TIC 56, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 912.9 bits (2358), Expect = 1.2e-261
Identity = 429/509 (84.28%), Postives = 476/509 (93.52%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKK------- 60
           MASINFNPF++WFS+RPNPI PLNL AFR+SLSQKS +SPNFAS S+SN+FKK       
Sbjct: 1   MASINFNPFENWFSRRPNPISPLNLIAFRDSLSQKSSTSPNFASISLSNVFKKQKKPEEA 60

Query: 61  PKKPEKAPDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEK 120
           P+KPE+AP++PGYY +ML+QFYWEC+NLPDYRHTPEVEKIL EDPVFE KENPTEEELEK
Sbjct: 61  PEKPEEAPEKPGYYREMLDQFYWECENLPDYRHTPEVEKILSEDPVFEKKENPTEEELEK 120

Query: 121 NEKLWKAIRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRP 180
           NEKLWKAIR+SPVV+FLERAE+IAAKYNELELKENENPYR+EDRKLW+AIPHVTGLDGRP
Sbjct: 121 NEKLWKAIRDSPVVQFLERAEKIAAKYNELELKENENPYRREDRKLWRAIPHVTGLDGRP 180

Query: 181 MPRKAIKTKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFI 240
           MPRKAIKT+KESDDKFWDFARQFF GLWG+RQRPYPPGRPIDVAQAIGYK+LE+RYYDFI
Sbjct: 181 MPRKAIKTRKESDDKFWDFARQFFLGLWGYRQRPYPPGRPIDVAQAIGYKRLEERYYDFI 240

Query: 241 MKSGGWYYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAI 300
           MKSGGWYYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWG+DMDEWAPIHMVYG+ERAI
Sbjct: 241 MKSGGWYYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGMERAI 300

Query: 301 ATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGV 360
           ATWEVRLGAAATAF+HKLQKGIPPWVPLKG EKK+YKQLQQEALES+RRDLAVL ANDGV
Sbjct: 301 ATWEVRLGAAATAFIHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGV 360

Query: 361 WPGVRIPSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQA 420
           WPGVR PSHALFLWASGTELT++LEADHMPNKYIPRDLRYKLAKI+PGLRPWEVLSVEQA
Sbjct: 361 WPGVRTPSHALFLWASGTELTTLLEADHMPNKYIPRDLRYKLAKILPGLRPWEVLSVEQA 420

Query: 421 MQQITYNGEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKV 480
           M QITY+G+WHRE LG+YTTGPPYIRHWN DV RL ++F  LS +VY++LER +PGF+KV
Sbjct: 421 MDQITYSGKWHRERLGSYTTGPPYIRHWNDDVKRLLRLFSNLSARVYSRLERKIPGFDKV 480

Query: 481 MEKVEADVDARYTRRNEKREAMKRAEYER 503
           +EKV+AD  AR   R EKR+A+KR++YER
Sbjct: 481 VEKVQADAAARRAARLEKRKALKRSKYER 509

[Close]

BLAST of Sed0000477 vs. NCBI nr
Match: XP_022982713.1 (protein TIC 56, chloroplastic [Cucurbita maxima])

HSP 1 Score: 911.4 bits (2354), Expect = 3.5e-261
Identity = 424/502 (84.46%), Postives = 473/502 (94.22%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           MASINFNPF++WFS+RPNPI PLNL AFR+SLSQKS +SPNFAS ++SN+FKK KKPE+A
Sbjct: 1   MASINFNPFENWFSRRPNPISPLNLIAFRDSLSQKSSTSPNFASITLSNVFKKQKKPEEA 60

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
           P++PGYY +ML+QFYWEC+NLPDYRHTPEVEKIL EDPVFE KENPTEEELEKNEKLWKA
Sbjct: 61  PEKPGYYREMLDQFYWECENLPDYRHTPEVEKILSEDPVFEKKENPTEEELEKNEKLWKA 120

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           IR+SPVV+FLERAE+IAAKYNE+ELKENENPYR+EDRKLW+AIPHVTGLDGRPMPRKAIK
Sbjct: 121 IRDSPVVQFLERAEKIAAKYNEIELKENENPYRREDRKLWRAIPHVTGLDGRPMPRKAIK 180

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           T+KESDDKFWDFARQFF GLWG+RQRPYPPGRPIDVAQAIGYK+LE+RYYDFIMKSGGWY
Sbjct: 181 TRKESDDKFWDFARQFFLGLWGYRQRPYPPGRPIDVAQAIGYKRLEERYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWG GIIDKDTFIWG+DMDEWAPIHMVYG+ERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGSGIIDKDTFIWGEDMDEWAPIHMVYGMERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAF+HKLQ+GIPPWVPLKG EKK+YKQLQQEALES+RRDLAVL ANDGVWPGVR P
Sbjct: 301 GAAATAFIHKLQRGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRTP 360

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASGTELT++LEADHMPNKYIPRDLRYKLAKI+PGLRPWEVLSVEQAM QITY+
Sbjct: 361 SHALFLWASGTELTTLLEADHMPNKYIPRDLRYKLAKILPGLRPWEVLSVEQAMDQITYS 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           G+WHRE LG+YTTGPPYIRHWN DV RL ++F  LS +VY++LER +PGF+KV+EK +AD
Sbjct: 421 GKWHRERLGSYTTGPPYIRHWNDDVKRLLRLFSNLSARVYSRLERRIPGFDKVVEKAQAD 480

Query: 481 VDARYTRRNEKREAMKRAEYER 503
             AR   R EKR+A+KR++YER
Sbjct: 481 AAARRAARLEKRKALKRSKYER 502

[Close]

BLAST of Sed0000477 vs. NCBI nr
Match: TYK24935.1 (protein TIC 56 [Cucumis melo var. makuwa])

HSP 1 Score: 910.6 bits (2352), Expect = 6.0e-261
Identity = 427/502 (85.06%), Postives = 468/502 (93.23%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           M SINFNPF++WFS+RPNPI PLNL AFR+SLSQKS +SPNFAS S+SNIFK+P+KP+KA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
            DEPGYYGKMLEQFYWECDNLPDYRHTPEVEKIL EDPVFENKE PT+EELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           +R+SPVV+FLERAEEIAAKYNELELK NENPYR ED+KLW+AIPHV GLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           T +ESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYK+LEKRYYDFIMKSGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWG+DMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKK+YKQLQQEALES+RRDLAVL ANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           GEWHRE LG+Y+TGPPYIR WNK+   L   + ++S  V N+LER++PGF+KVMEK+EAD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 VDARYTRRNEKREAMKRAEYER 503
            +ARY RR E+R+A +RAE +R
Sbjct: 595 RNARYRRRRERRKARRRAELKR 616

[Close]

BLAST of Sed0000477 vs. ExPASy Swiss-Prot
Match: Q7Y1W1 (Protein TIC 56, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC56 PE=1 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 4.4e-222
Identity = 357/500 (71.40%), Postives = 424/500 (84.80%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           M+S+NFNPF +WF K PNP+  +N  +  +S   KS  SPNFAS  +    KK  KPE A
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKS-QSPNFASIGLPKFSKKSPKPETA 60

Query: 61  -PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWK 120
             DEPG Y ++ EQF WEC+N+PDYRHTPEV+K+L EDPVFE KENP+ EE+E  +K W+
Sbjct: 61  GTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWE 120

Query: 121 AIRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAI 180
           + R SPVV+F+ RAEEIA   N++EL++N+ PYRKED+  W+AIPHV G DGRPMPRKAI
Sbjct: 121 SFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAI 180

Query: 181 KTKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGW 240
           K+K+ESDDKFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYK+LEKRYYDFIMK+GGW
Sbjct: 181 KSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKTGGW 240

Query: 241 YYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVR 300
           +YKDRLGR+RGP E+ITLKTA+G GIID+DTFIWG+DMDEWAPIHMVYGLE AIATWEVR
Sbjct: 241 WYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVR 300

Query: 301 LGAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRI 360
           LGAAATAFLHKLQKGIPPWVPLKG E K+YKQLQ+EA+ES++RD+AVLEAN GVWPGVR 
Sbjct: 301 LGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRT 360

Query: 361 PSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITY 420
           PSHALFLWASG+ELT++LE+DHMPNK+IP+ LR +LAK+IPGLRPWEV+S+EQAM QI+Y
Sbjct: 361 PSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQISY 420

Query: 421 NGEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEA 480
            GEW+REPLGTYTTGPPYIR WN+ V+RLF+IFY LS +V  KLERTVPGF+ +M+KV+ 
Sbjct: 421 GGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQK 480

Query: 481 DVDARYTRRNEKREAMKRAE 500
           D D R  RR ++RE   R E
Sbjct: 481 DYDKRIARRMKRREEELREE 499

[Close]

BLAST of Sed0000477 vs. ExPASy TrEMBL
Match: A0A6J1CXB7 (protein TIC 56, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015055 PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 1.5e-273
Identity = 444/502 (88.45%), Postives = 483/502 (96.22%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           MASINFNPF++WFS+RPNPI PLNLTAFR+SLSQKS +SPNFASTS+SN FKK +KP+KA
Sbjct: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKKSQKPKKA 60

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
            DEPGYYGKMLEQF+WECDNLPDYRHTPEVEKIL EDPV +NKENP+EEE+EKNEKLWKA
Sbjct: 61  SDEPGYYGKMLEQFFWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           +R SPVV+FLERAEEIAAKYNELELKENENPYR ED+KLW+AIPHV GLDGRPMPRKAIK
Sbjct: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           TK+ES+DKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYK+LEKRYYDFIM+SGGWY
Sbjct: 181 TKRESEDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWG+DMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKGHEKK+YKQLQQEALES+RRDLAVL ANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASG+ELTSILEADHMPNKYIP+DLRYKLAKIIPGLRPWEVLSVEQAM+QITYN
Sbjct: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           GEWHREPLGTYTTGPPYIRHWNKDV R+F+IF+ LS +VYNK+ERT+PGF+K+M+KV+AD
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480

Query: 481 VDARYTRRNEKREAMKRAEYER 503
             AR  RR E+REA+KRAE+ER
Sbjct: 481 AAARDARRKERREALKRAEFER 502

[Close]

BLAST of Sed0000477 vs. ExPASy TrEMBL
Match: A0A6J1J5K7 (protein TIC 56, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481500 PE=4 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.7e-261
Identity = 424/502 (84.46%), Postives = 473/502 (94.22%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           MASINFNPF++WFS+RPNPI PLNL AFR+SLSQKS +SPNFAS ++SN+FKK KKPE+A
Sbjct: 1   MASINFNPFENWFSRRPNPISPLNLIAFRDSLSQKSSTSPNFASITLSNVFKKQKKPEEA 60

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
           P++PGYY +ML+QFYWEC+NLPDYRHTPEVEKIL EDPVFE KENPTEEELEKNEKLWKA
Sbjct: 61  PEKPGYYREMLDQFYWECENLPDYRHTPEVEKILSEDPVFEKKENPTEEELEKNEKLWKA 120

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           IR+SPVV+FLERAE+IAAKYNE+ELKENENPYR+EDRKLW+AIPHVTGLDGRPMPRKAIK
Sbjct: 121 IRDSPVVQFLERAEKIAAKYNEIELKENENPYRREDRKLWRAIPHVTGLDGRPMPRKAIK 180

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           T+KESDDKFWDFARQFF GLWG+RQRPYPPGRPIDVAQAIGYK+LE+RYYDFIMKSGGWY
Sbjct: 181 TRKESDDKFWDFARQFFLGLWGYRQRPYPPGRPIDVAQAIGYKRLEERYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWG GIIDKDTFIWG+DMDEWAPIHMVYG+ERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGSGIIDKDTFIWGEDMDEWAPIHMVYGMERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAF+HKLQ+GIPPWVPLKG EKK+YKQLQQEALES+RRDLAVL ANDGVWPGVR P
Sbjct: 301 GAAATAFIHKLQRGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRTP 360

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASGTELT++LEADHMPNKYIPRDLRYKLAKI+PGLRPWEVLSVEQAM QITY+
Sbjct: 361 SHALFLWASGTELTTLLEADHMPNKYIPRDLRYKLAKILPGLRPWEVLSVEQAMDQITYS 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           G+WHRE LG+YTTGPPYIRHWN DV RL ++F  LS +VY++LER +PGF+KV+EK +AD
Sbjct: 421 GKWHRERLGSYTTGPPYIRHWNDDVKRLLRLFSNLSARVYSRLERRIPGFDKVVEKAQAD 480

Query: 481 VDARYTRRNEKREAMKRAEYER 503
             AR   R EKR+A+KR++YER
Sbjct: 481 AAARRAARLEKRKALKRSKYER 502

[Close]

BLAST of Sed0000477 vs. ExPASy TrEMBL
Match: A0A5D3DMT8 (Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00500 PE=4 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 2.9e-261
Identity = 427/502 (85.06%), Postives = 468/502 (93.23%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           M SINFNPF++WFS+RPNPI PLNL AFR+SLSQKS +SPNFAS S+SNIFK+P+KP+KA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
            DEPGYYGKMLEQFYWECDNLPDYRHTPEVEKIL EDPVFENKE PT+EELEKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           +R+SPVV+FLERAEEIAAKYNELELK NENPYR ED+KLW+AIPHV GLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           T +ESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYK+LEKRYYDFIMKSGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWG+DMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKK+YKQLQQEALES+RRDLAVL ANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           GEWHRE LG+Y+TGPPYIR WNK+   L   + ++S  V N+LER++PGF+KVMEK+EAD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 VDARYTRRNEKREAMKRAEYER 503
            +ARY RR E+R+A +RAE +R
Sbjct: 595 RNARYRRRRERRKARRRAELKR 616

[Close]

BLAST of Sed0000477 vs. ExPASy TrEMBL
Match: A0A1S3B5J8 (protein TIC 56, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486261 PE=4 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 2.9e-261
Identity = 427/502 (85.06%), Postives = 468/502 (93.23%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           M SINFNPF++WFS+RPNPI PLNL AFR+SLSQKS +SPNFAS S+SNIFK+P+KP+KA
Sbjct: 1   MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 60

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
            DEPGYYGKMLEQFYWECDNLPDYRHTPEVEKIL EDPVFENKE PT+EELEKNEKLWKA
Sbjct: 61  TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 120

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           +R+SPVV+FLERAEEIAAKYNELELK NENPYR ED+KLW+AIPHV GLDGRPMPRKAIK
Sbjct: 121 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           T +ESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYK+LEKRYYDFIMKSGGWY
Sbjct: 181 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWG+DMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKK+YKQLQQEALES+RRDLAVL ANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIPRDLRY+LA++IPGLRPWEVLSVEQAM QITYN
Sbjct: 361 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           GEWHRE LG+Y+TGPPYIR WNK+   L   + ++S  V N+LER++PGF+KVMEK+EAD
Sbjct: 421 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 480

Query: 481 VDARYTRRNEKREAMKRAEYER 503
            +ARY RR E+R+A +RAE +R
Sbjct: 481 RNARYRRRRERRKARRRAELKR 502

[Close]

BLAST of Sed0000477 vs. ExPASy TrEMBL
Match: A0A6J1F7C0 (protein TIC 56, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441515 PE=4 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 5.0e-261
Identity = 425/502 (84.66%), Postives = 471/502 (93.82%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           MASINFNPF++WFS+ PNPI PLNL AFR+SLSQKS +SPNFAS S+SN+FKK KKPE+A
Sbjct: 1   MASINFNPFENWFSRPPNPISPLNLIAFRDSLSQKSSTSPNFASISLSNVFKKQKKPEEA 60

Query: 61  PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWKA 120
           P++PGYY +ML+QFYWEC+NLPDYRHTPEVEKIL EDPVFE KENPTEEELEKNEKLWKA
Sbjct: 61  PEKPGYYREMLDQFYWECENLPDYRHTPEVEKILSEDPVFEKKENPTEEELEKNEKLWKA 120

Query: 121 IRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAIK 180
           IR+SPVV+FLERAE+IAAKYNELELKENENPYR+EDRKLW+AIPHVTGLDGRPMPRKAIK
Sbjct: 121 IRDSPVVQFLERAEKIAAKYNELELKENENPYRREDRKLWRAIPHVTGLDGRPMPRKAIK 180

Query: 181 TKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGWY 240
           T+KESDDKFWDFARQFF GLWG+RQRPYPPGRPIDVAQAIGYK+LE+RYYDFIMKSGGWY
Sbjct: 181 TRKESDDKFWDFARQFFLGLWGYRQRPYPPGRPIDVAQAIGYKRLEERYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWG+DMDEWAPIHMVYG+ERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGMERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRIP 360
           GAAATAF+HKLQKGIPPWVPLKG EKK+YKQLQQEALES+RRDLAVL ANDGVWPGVR P
Sbjct: 301 GAAATAFIHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRTP 360

Query: 361 SHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITYN 420
           SHALFLWASGTELT++LEADHMPNKYIPRDLRYKLAKI+PGLRPWEVLSVEQAM  ITY+
Sbjct: 361 SHALFLWASGTELTTLLEADHMPNKYIPRDLRYKLAKILPGLRPWEVLSVEQAMDHITYS 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEAD 480
           G+WHRE LG+YTTGPPYI HWN DV RL ++F  LS +VY++LER +PGF+KV+EK +AD
Sbjct: 421 GKWHRERLGSYTTGPPYISHWNDDVKRLLRLFSNLSARVYSRLERKIPGFDKVVEKAQAD 480

Query: 481 VDARYTRRNEKREAMKRAEYER 503
             AR   R EKR+A+KR++YER
Sbjct: 481 AAARRAARLEKRKALKRSKYER 502

[Close]

BLAST of Sed0000477 vs. TAIR 10
Match: AT5G01590.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 59 proteins in 31 species: Archae - 0; Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 771.9 bits (1992), Expect = 3.1e-223
Identity = 357/500 (71.40%), Postives = 424/500 (84.80%), Query Frame = 0


Query: 1   MASINFNPFDSWFSKRPNPILPLNLTAFRESLSQKSPSSPNFASTSISNIFKKPKKPEKA 60
           M+S+NFNPF +WF K PNP+  +N  +  +S   KS  SPNFAS  +    KK  KPE A
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKS-QSPNFASIGLPKFSKKSPKPETA 60

Query: 61  -PDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILKEDPVFENKENPTEEELEKNEKLWK 120
             DEPG Y ++ EQF WEC+N+PDYRHTPEV+K+L EDPVFE KENP+ EE+E  +K W+
Sbjct: 61  GTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWE 120

Query: 121 AIRESPVVKFLERAEEIAAKYNELELKENENPYRKEDRKLWKAIPHVTGLDGRPMPRKAI 180
           + R SPVV+F+ RAEEIA   N++EL++N+ PYRKED+  W+AIPHV G DGRPMPRKAI
Sbjct: 121 SFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAI 180

Query: 181 KTKKESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKQLEKRYYDFIMKSGGW 240
           K+K+ESDDKFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYK+LEKRYYDFIMK+GGW
Sbjct: 181 KSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKTGGW 240

Query: 241 YYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGDDMDEWAPIHMVYGLERAIATWEVR 300
           +YKDRLGR+RGP E+ITLKTA+G GIID+DTFIWG+DMDEWAPIHMVYGLE AIATWEVR
Sbjct: 241 WYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVR 300

Query: 301 LGAAATAFLHKLQKGIPPWVPLKGHEKKSYKQLQQEALESRRRDLAVLEANDGVWPGVRI 360
           LGAAATAFLHKLQKGIPPWVPLKG E K+YKQLQ+EA+ES++RD+AVLEAN GVWPGVR 
Sbjct: 301 LGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRT 360

Query: 361 PSHALFLWASGTELTSILEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMQQITY 420
           PSHALFLWASG+ELT++LE+DHMPNK+IP+ LR +LAK+IPGLRPWEV+S+EQAM QI+Y
Sbjct: 361 PSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQISY 420

Query: 421 NGEWHREPLGTYTTGPPYIRHWNKDVLRLFQIFYQLSNQVYNKLERTVPGFNKVMEKVEA 480
            GEW+REPLGTYTTGPPYIR WN+ V+RLF+IFY LS +V  KLERTVPGF+ +M+KV+ 
Sbjct: 421 GGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQK 480

Query: 481 DVDARYTRRNEKREAMKRAE 500
           D D R  RR ++RE   R E
Sbjct: 481 DYDKRIARRMKRREEELREE 499

The following BLAST results are available for this feature:

BLAST of Sed0000477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145657.1	3.1e-273	88.45	protein TIC 56, chloroplastic [Momordica charantia]	[more]
XP_038905710.1	3.8e-271	88.45	protein TIC 56, chloroplastic [Benincasa hispida]	[more]
XP_023527872.1	1.2e-261	84.28	protein TIC 56, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022982713.1	3.5e-261	84.46	protein TIC 56, chloroplastic [Cucurbita maxima]	[more]
TYK24935.1	6.0e-261	85.06	protein TIC 56 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0000477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Y1W1	4.4e-222	71.40	Protein TIC 56, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC56 PE=1 SV=1	[more]

BLAST of Sed0000477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXB7	1.5e-273	88.45	protein TIC 56, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015055 PE=...	[more]
A0A6J1J5K7	1.7e-261	84.46	protein TIC 56, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481500 PE=4 S...	[more]
A0A5D3DMT8	2.9e-261	85.06	Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00500...	[more]
A0A1S3B5J8	2.9e-261	85.06	protein TIC 56, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486261 PE=4 SV=1	[more]
A0A6J1F7C0	5.0e-261	84.66	protein TIC 56, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441515 PE=4...	[more]

BLAST of Sed0000477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01590.1	3.1e-223	71.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..507
IPR025640	GYF domain 2	PFAM	PF14237	GYF_2	coord: 239..289 e-value: 6.0E-10 score: 38.7
IPR037471	Protein TIC56	PANTHER	PTHR37755	PROTEIN TIC 56, CHLOROPLASTIC	coord: 1..502

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000477.1	Sed0000477.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009706	chloroplast inner membrane
molecular_function	GO:0008320	protein transmembrane transporter activity