Sed0000438 (gene) Chayote v1

Overview
NameSed0000438
Typegene
OrganismSechium edule (Chayote v1)
DescriptionU3 small nucleolar RNA-associated protein 6 homolog
LocationLG10: 3958030 .. 3962871 (-)
RNA-Seq ExpressionSed0000438
SyntenySed0000438
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACGTTCTCATCGTCTTCTTAACAGTTCAGAACCTTTCTGTACCGCCGCCCTAAACCCGCCGCCCTAAACCTGCATTCCCTTCGAGTCCTCTCGCACCAACCCCAACCATGGCCGACGTCGTGCAGTTCCGTCTGGAGGGCATGGTCGACGAGCTCGACGACCTCGAGCAACGCGGCCTCTTTTCCCGGCGAGAGATCGCCGAGATTGTGAAGCAGCGGCGCAAGTTCGAGTACCGTTTGAAGCGCCCTTGTCCGCTCAAGCAGGACTATCTTTCCTACATCGATTACGAGACGCATTTGGATTCGCTTCGTCGTCTCAGGAAAAAGGCGGCGACTCGTGAGCTTAAGCAGCAGGGAAATAAGAAGATGAGGAAGTCTGTCTCTGATTTTGCTTGCGTTAAAAGGATTTTGTATGTCTATCGGCTTGTGGTTACTAGGTATAAGGGCGATATTGATATTTGGTTTCAGTATCTTGAGTTTTGTAGAGCGCGAAAGAATGGGAGAATGAAGAAGGTAATATTATGTATTCCACTTTCAGATTTAATGTAGTTTCTGTTCATGTTTATGTTTAGAAGAGGAGTAATTGACTTACATTTTGATTCTGGGTGGCCTTTTGTTGTTGATATGAAGAGTTAGTTAAGTTACTTATGTATCAGCGTTTTTAAAAGCTGCGGAATAGCTTACTCTGGGCTTACCCTGTGTATCGAATGTTGGAGGAATACTTTCCTTCGTATCCAAATGTTGCAGGTGTGTCCGGTGAAAATAGTCGCGGTCTTGTGACGCTCGCCGATTAAAAAAAAAAAATAGCATAGTTGAAGTGAGGGTTAATAAATGTCTTTATTTTAGCTGATAAAGAAAAAAATGAAACTTCTAAAACGTATAGATTTTGCATTTAGAGGTTGTAGAACTTAGTTTTTGGTCCCAAAAGGGGTAGTAGGCTTGGTCATATGTTCGAAACTCTCACGTGACATTAATTTGTAGAAACCTCTCTATCTCTATTCCTTTGTCTCCTAGTGCCTGGCTTAAGGACGGGCGAGGTTATCCCGTTTATAGTGGAGGAAACCTTGGATTTTTCGGTTTCTAAAGAAAGAACTTTTTTTTGTACCATTAATGAAAGGATGATGCACGGCTTTTATTTGAGGCGCTCAAGGTGCAAGGCAAGCTGCTAGACCTGCGACTTGAGCCTAGGTGCAAGCCTGAGTAAGGTTTTTAAAACACTGGTCGATAACAATTGGTGTTTCCCAACATTTTGCAGGTTCTTGCTCAGCTGATAAGGTTTCACCCAAAAGTTCCAGGGGTGTGGATATATGCTGCTGCTTGGGAGTTTGATCATAATACCAATGTGGATGCTGCTCGTTCTCTTATGTTGAGTGGTTTGAGAGTTTGCCCAACATCAGAGGATCTTTGGGTAGAATATCTACGGATGGAGCTTACGTATCTTAATAAATTGAAGGCTCGAAAGGTTGCTCTCGGAGAGGACAAGGGAAGTCTAGTTCGTGAAAATCAAGAGGAAAAACAGTGGAGAGAGGAAAATAAAGATTTGTTTATGTCAATTGGTGAAGAAAAAGAAGACGATGATGAATCAGTTGTTGAAACGGAGTCAAAGAATAAACTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACGATGGAGCAATTGAAGCTCTTCCTTCTAGTTTTAGCCTGAGGAAACGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCACTCAAAAATATTACAGGATATGAAAAGGGACTTCGGTACAGGACCACAATATTGGGATTGGCTGGCTAGATTTCAGTATAATCCTGAAAATATACAGGGAATGGGTGATAAAAAGGAAAATTCTCAGATTGAAAAGGCTTTCCAGGTGCGATTTTTTGCATGTTGGAAATCACAATCATGTCTAATATGCATAGTTATCTTAATTGTCTATTATTTTATTTATTTTGATAAATGGTAGTTTAAGATGTCTCCTGAGTCCGGGCTTGGGACAGACGTAGGTGCCCCGAGTATGTAGGGGCGAAGCTTCGATTCTTGATTATCATAAAAGATGACAGTTTAAAAGAAAGCATGTAATTATTGCAAACATTAGCTTTAAAAAAGGACATGAACTTTGTTTACACAAAACAGGACTAGATGACAATTATGTATATAACTTGTGCCTTCTTTATCTCTATAAGTATCTAAGTTTACTTTTTTTCATGTTTACCAACAAAAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTGCATTGTTTAGCTTGTATGTGGAGTTTTTGATGAACATCATTACCACCTCTGATAAGGGAGAACAAACGCCCGCGTTATCTAGTCATACTATGAGTATCACTTCACGACTCTTGACGGTATATGAAAAGGCTTTAACATCAGGACATATTAGTGACGGATTAGCCTGCCAATATGTTTCATTTTATCTGCAAATTGGGAGATTGGATGAAGCACGGAAGCTTGCAGAAAAACTTTGCAGTGGAGAACTTTCAAATTCAGTGAAGTTATGGGTACTGAGAGTATCCATGGAAATAAAATGCATTTTGAAGGACTCTCCCTCTCCAAGCAAGGATGATCTGAAGTCTATATTTGAACTGACAAAAGAGGTTCTGAGAGATTTTTCAGTTTCAGATTCTGGGAGTCTGTGGCTAACGGTATCATCTGCTACACCTTAAAATAGCTTAAGCACTGATATGGTGTTATGTTCACTTTTCTTCTAATGTTATATCTTTTGATGAACCTGATTTCCTAGCATGGTCTCTTTTTCCTAACACTTTTAGCTTATTTATAATGTTTTGAAATTGAGATGATGTGGTAATTTGAAGTGAGAACTCAATCCCATATTGGTTTACTCATTGCAGGTCCTCAAGTTTTTTGCCAATCAAAGTTATTATTTTGACAAGTTGGTGGAAATCTCTCTTTTAGCATTGGCTAAATCTGGTGGGAGTGGAGATGGACTTTCACTCTCCTCAGCTATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAACGTACAAGAGAAGTGTATAAGAAGTATGTCGTTGAACACCAGAAAATTAGTCTTCAAAATAATTTTTATTTCGTGATTTTCCATGTTGTCGGACTTTGAACCAATCATGGGTGGTCTAATGGTCAAAGAAGGTTTTGGGGATTCAAGAAACTATAGATTTAATCTATAGTGACCACCTACCTATCTAAAAAATAATTTCCTACGGATTCCTTGACATTCAAATGTTTATCCCATGAGATTAGTGGAGGTGCACATAAGTTGGCCTGGACACTTATGGATAAAAAGAAAAAAAACTCCATAGTGTCTGTCTTTCTCAAAGAAACCTTCTTTACAAAGTAGTTCTATTTCAAGTATATTTTGCAGTAATGGTGCGTATTTATTCCCAGTTTCAGTATCTAAAAGCCTTATTTCCCTTGTTTCAACAGATTTCTTGGATTGCCCCATCCAGGGCTTGCTATCTACAATACTTGTATTCAGCTGGAATCCAACCTTGCATCTGCAGGGGACAAAGATGGTCTCGCCAATGCTCGAAAGCTGTTTGAAGCTGCACTTACAACTTATGGTCAAGATGTTAGTTTGTGGCAAGAGTACTACAAAATGGAATCTAAGGTAACCCTTCAGTTTCTATAGAATCTGTTGTACGTGAAATGCATAAATGGTTTTTTCTACTTTTATCCCCCATAGATCGTCAGAATTATACTATCGTGCATAAATGTAAGGACTACAATCCTTCCCTAACCCTTTCACACTCAGAAATCCCCAAACAAGAATAGAAATGACTAGTCCCCGAGGGGTGGTACAGTGGTTGAAGACTTGGGCTTAGAGGGTATGCTCCCCTCAAACATTCTAGGTTCGAGACTCACCTGTGACACTACTCCTTCGATGTCTCCGGTGTCTGGCTTAAGGATGGGCGTGATCACCTTTTTTCAAAAAAAAAAGAAAAGAAAAGAAATGACTATAGTATACTGAAAGATCCTTAGTATATGGAGATGATATTTTATAAACATAAACAATAACAATAACAAGTGAGCAAATTAAGACAAAACTCCCTGATGAGTTTGAGAGCACCGGACTCTTCCCTCTAAGGTCTACAACTGTACCAAAAAACCAGCTCCCCCTTCAACCAGCCTCCTACCCCTCTATTTAAACCAATTAATTGCCAAAATTCCTGGCTACCCCACCACTAACCTTCATAATTACAATTTTGCCCTTTCTCGCTCTTTTCCGTTGATCCTGGTTCTATCCTAACAGTATAAATTTCATAATCGTAACATTAGAAAATGAATCACACGGTTGCCGAATTTTCTGCTAAATTTTAAATGAATGTGTTGCCCACTTATCGACCAATATACTCACGAGTTCTTTCTTGCCCCCGCTGGTTTTACAGATAGGATCATCAGAAACTGCAGCTGCTATTAGTTGGCGTGCAAGGAAAACACTAAAAGATGCTACAGCATTTGTTACTACCTCTGATTTGTGATTTTTTTTCCTTTGTATAATTATCAAATCAATTTTGACCTCTTTATGTAGAATGGTTGATTTATTGAATTTTGGCAATTAGAAACAGATATAGATATCACATATAGCCAAAAAGGAGCATTAGCCAATGCACTTTTGTTTCTTTAGTTGTAGATTTTAATTCATGGCCTCATAGTTATCTGTTAAGCCATTGTTCTTATCAGCAATCAAATATACTTCACCTTCACATAACTAGATTCTGCTGTTCATTCATTATGTAATTCATGCACAAAGGTATGCAAAACACAAGCTTAAGCAGAAG

mRNA sequence

AGACGTTCTCATCGTCTTCTTAACAGTTCAGAACCTTTCTGTACCGCCGCCCTAAACCCGCCGCCCTAAACCTGCATTCCCTTCGAGTCCTCTCGCACCAACCCCAACCATGGCCGACGTCGTGCAGTTCCGTCTGGAGGGCATGGTCGACGAGCTCGACGACCTCGAGCAACGCGGCCTCTTTTCCCGGCGAGAGATCGCCGAGATTGTGAAGCAGCGGCGCAAGTTCGAGTACCGTTTGAAGCGCCCTTGTCCGCTCAAGCAGGACTATCTTTCCTACATCGATTACGAGACGCATTTGGATTCGCTTCGTCGTCTCAGGAAAAAGGCGGCGACTCGTGAGCTTAAGCAGCAGGGAAATAAGAAGATGAGGAAGTCTGTCTCTGATTTTGCTTGCGTTAAAAGGATTTTGTATGTCTATCGGCTTGTGGTTACTAGGTATAAGGGCGATATTGATATTTGGTTTCAGTATCTTGAGTTTTGTAGAGCGCGAAAGAATGGGAGAATGAAGAAGGTTCTTGCTCAGCTGATAAGGTTTCACCCAAAAGTTCCAGGGGTGTGGATATATGCTGCTGCTTGGGAGTTTGATCATAATACCAATGTGGATGCTGCTCGTTCTCTTATGTTGAGTGGTTTGAGAGTTTGCCCAACATCAGAGGATCTTTGGGTAGAATATCTACGGATGGAGCTTACGTATCTTAATAAATTGAAGGCTCGAAAGGTTGCTCTCGGAGAGGACAAGGGAAGTCTAGTTCGTGAAAATCAAGAGGAAAAACAGTGGAGAGAGGAAAATAAAGATTTGTTTATGTCAATTGGTGAAGAAAAAGAAGACGATGATGAATCAGTTGTTGAAACGGAGTCAAAGAATAAACTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACGATGGAGCAATTGAAGCTCTTCCTTCTAGTTTTAGCCTGAGGAAACGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCACTCAAAAATATTACAGGATATGAAAAGGGACTTCGGTACAGGACCACAATATTGGGATTGGCTGGCTAGATTTCAGTATAATCCTGAAAATATACAGGGAATGGGTGATAAAAAGGAAAATTCTCAGATTGAAAAGGCTTTCCAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTGCATTGTTTAGCTTGTATGTGGAGTTTTTGATGAACATCATTACCACCTCTGATAAGGGAGAACAAACGCCCGCGTTATCTAGTCATACTATGAGTATCACTTCACGACTCTTGACGGTATATGAAAAGGCTTTAACATCAGGACATATTAGTGACGGATTAGCCTGCCAATATGTTTCATTTTATCTGCAAATTGGGAGATTGGATGAAGCACGGAAGCTTGCAGAAAAACTTTGCAGTGGAGAACTTTCAAATTCAGTGAAGTTATGGGTACTGAGAGTATCCATGGAAATAAAATGCATTTTGAAGGACTCTCCCTCTCCAAGCAAGGATGATCTGAAGTCTATATTTGAACTGACAAAAGAGGTTCTGAGAGATTTTTCAGTTTCAGATTCTGGGAGTCTGTGGCTAACGGTCCTCAAGTTTTTTGCCAATCAAAGTTATTATTTTGACAAGTTGGTGGAAATCTCTCTTTTAGCATTGGCTAAATCTGGTGGGAGTGGAGATGGACTTTCACTCTCCTCAGCTATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAACGTACAAGAGAAGTGTATAAGAAATTTCTTGGATTGCCCCATCCAGGGCTTGCTATCTACAATACTTGTATTCAGCTGGAATCCAACCTTGCATCTGCAGGGGACAAAGATGGTCTCGCCAATGCTCGAAAGCTGTTTGAAGCTGCACTTACAACTTATGGTCAAGATGTTAGTTTGTGGCAAGAGTACTACAAAATGGAATCTAAGATAGGATCATCAGAAACTGCAGCTGCTATTAGTTGGCGTGCAAGGAAAACACTAAAAGATGCTACAGCATTTGTTACTACCTCTGATTTGTGATTTTTTTTCCTTTGTATAATTATCAAATCAATTTTGACCTCTTTATGTAGAATGGTTGATTTATTGAATTTTGGCAATTAGAAACAGATATAGATATCACATATAGCCAAAAAGGAGCATTAGCCAATGCACTTTTGTTTCTTTAGTTGTAGATTTTAATTCATGGCCTCATAGTTATCTGTTAAGCCATTGTTCTTATCAGCAATCAAATATACTTCACCTTCACATAACTAGATTCTGCTGTTCATTCATTATGTAATTCATGCACAAAGGTATGCAAAACACAAGCTTAAGCAGAAG

Coding sequence (CDS)

ATGGCCGACGTCGTGCAGTTCCGTCTGGAGGGCATGGTCGACGAGCTCGACGACCTCGAGCAACGCGGCCTCTTTTCCCGGCGAGAGATCGCCGAGATTGTGAAGCAGCGGCGCAAGTTCGAGTACCGTTTGAAGCGCCCTTGTCCGCTCAAGCAGGACTATCTTTCCTACATCGATTACGAGACGCATTTGGATTCGCTTCGTCGTCTCAGGAAAAAGGCGGCGACTCGTGAGCTTAAGCAGCAGGGAAATAAGAAGATGAGGAAGTCTGTCTCTGATTTTGCTTGCGTTAAAAGGATTTTGTATGTCTATCGGCTTGTGGTTACTAGGTATAAGGGCGATATTGATATTTGGTTTCAGTATCTTGAGTTTTGTAGAGCGCGAAAGAATGGGAGAATGAAGAAGGTTCTTGCTCAGCTGATAAGGTTTCACCCAAAAGTTCCAGGGGTGTGGATATATGCTGCTGCTTGGGAGTTTGATCATAATACCAATGTGGATGCTGCTCGTTCTCTTATGTTGAGTGGTTTGAGAGTTTGCCCAACATCAGAGGATCTTTGGGTAGAATATCTACGGATGGAGCTTACGTATCTTAATAAATTGAAGGCTCGAAAGGTTGCTCTCGGAGAGGACAAGGGAAGTCTAGTTCGTGAAAATCAAGAGGAAAAACAGTGGAGAGAGGAAAATAAAGATTTGTTTATGTCAATTGGTGAAGAAAAAGAAGACGATGATGAATCAGTTGTTGAAACGGAGTCAAAGAATAAACTGGATTTGTTTCGAGAGCAGGGTTCAAACATTTTAGAAACTATCTACGATGGAGCAATTGAAGCTCTTCCTTCTAGTTTTAGCCTGAGGAAACGTGTCTTAGAGATATTGGAAGCAATGGATTTAGCTCATTCAGAAGAAATGCACTCAAAAATATTACAGGATATGAAAAGGGACTTCGGTACAGGACCACAATATTGGGATTGGCTGGCTAGATTTCAGTATAATCCTGAAAATATACAGGGAATGGGTGATAAAAAGGAAAATTCTCAGATTGAAAAGGCTTTCCAGGTCTACGAGGAAGGCCTGGAGTGTGTGCCTTCATCTGCATTGTTTAGCTTGTATGTGGAGTTTTTGATGAACATCATTACCACCTCTGATAAGGGAGAACAAACGCCCGCGTTATCTAGTCATACTATGAGTATCACTTCACGACTCTTGACGGTATATGAAAAGGCTTTAACATCAGGACATATTAGTGACGGATTAGCCTGCCAATATGTTTCATTTTATCTGCAAATTGGGAGATTGGATGAAGCACGGAAGCTTGCAGAAAAACTTTGCAGTGGAGAACTTTCAAATTCAGTGAAGTTATGGGTACTGAGAGTATCCATGGAAATAAAATGCATTTTGAAGGACTCTCCCTCTCCAAGCAAGGATGATCTGAAGTCTATATTTGAACTGACAAAAGAGGTTCTGAGAGATTTTTCAGTTTCAGATTCTGGGAGTCTGTGGCTAACGGTCCTCAAGTTTTTTGCCAATCAAAGTTATTATTTTGACAAGTTGGTGGAAATCTCTCTTTTAGCATTGGCTAAATCTGGTGGGAGTGGAGATGGACTTTCACTCTCCTCAGCTATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAACGTACAAGAGAAGTGTATAAGAAATTTCTTGGATTGCCCCATCCAGGGCTTGCTATCTACAATACTTGTATTCAGCTGGAATCCAACCTTGCATCTGCAGGGGACAAAGATGGTCTCGCCAATGCTCGAAAGCTGTTTGAAGCTGCACTTACAACTTATGGTCAAGATGTTAGTTTGTGGCAAGAGTACTACAAAATGGAATCTAAGATAGGATCATCAGAAACTGCAGCTGCTATTAGTTGGCGTGCAAGGAAAACACTAAAAGATGCTACAGCATTTGTTACTACCTCTGATTTGTGA

Protein sequence

MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDYETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQEEKQWREENKDLFMSIGEEKEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAHSEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLECVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLACQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKSIFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFEAALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL
Homology
[Close]
BLAST of Sed0000438 vs. NCBI nr
Match: XP_023517938.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1132.5 bits (2928), Expect = 0.0e+00
Identity = 577/652 (88.50%), Postives = 619/652 (94.94%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY++YIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           ETHLDSLRRLRKKA +RELK+QGNKKMRKS SDFACVKRILY+YRL V+RYKGDID+WF+
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSASDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+TNVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSIGEE 240
           TSEDLWVEYLRMELTYLNKLKARKVALGED+GSLVREN+  E+KQWREENKDLFMSIGE+
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           +ED+D SV ETESKNKLDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEE+HSKILQD+KRDFGT PQYWDWLAR QYNP+++QGM DKKENS+IEKA QVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQVYEEGLE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
            VPSSA+FSLYVEFLMN+I TS KGEQ+  LSS TM+ TSRLL VYEKALT GHI+D LA
Sbjct: 361 HVPSSAMFSLYVEFLMNVI-TSVKGEQSSGLSSCTMNTTSRLLMVYEKALTLGHITDDLA 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYVSFYLQ+G+LDEA KLAE+LCSG+LSNSVKLWVLRVS EIK ILKDSPSPSKDDL S
Sbjct: 421 CQYVSFYLQLGKLDEACKLAERLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLTS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTKE+LRDFSVS+SGSLWLTVLKFFANQS+YFD+LVEISLLALAKSGGS DG SLSS
Sbjct: 481 IFELTKEILRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLLALAKSGGSEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
           AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIY TCIQLESNLASAGDK+GLA+ARKLFE
Sbjct: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +AL TYGQDVSLWQEYY MESK+GSSETAAAI WRARKTLKDATA  T+SDL
Sbjct: 601 SALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Sed0000438 vs. NCBI nr
Match: XP_023003045.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita maxima])

HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 574/652 (88.04%), Postives = 620/652 (95.09%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY++YIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           ETHLDSLRRLRKKA +RELK+QGNKKMRKSVSDFACVKRILY+YRL V+RYKGDID+WF+
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+TNVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSIGEE 240
           TSEDLWVEYLRMELTYLNKLKARKVALGED+GSLVREN+  E+KQWREENKDLFMSIGE+
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           +ED+D SV ETESKNKLDLFRE+GSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEE+HSKILQD+KRDFGT PQYWDWLAR +YNP+++QGM DKK+NS+IEKA QVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLRYNPDDVQGMSDKKKNSRIEKAVQVYEEGLE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
            VPSSA+FSLYVEFLMN+I TS KGEQ+  LSS TM+ TSRLL VYEKALTSGHI+D LA
Sbjct: 361 HVPSSAMFSLYVEFLMNVI-TSVKGEQSSGLSSCTMNTTSRLLMVYEKALTSGHITDDLA 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYVSFY Q+G+LDEARKLA++LCSG+LSNSVKLWVLRVS EIK ILKDSPSPSKDDLKS
Sbjct: 421 CQYVSFYFQLGKLDEARKLAKRLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLKS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTKEVLRDFSVS+SGSLWLTVLKFFANQS+YFD+LVEISL ALAKSGGS DG SLSS
Sbjct: 481 IFELTKEVLRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLFALAKSGGSEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
           AIVDF+LQKDGIQRTREVYKKFL LPHPGLAIY TCIQLESNLASAGDK+GLA+ARKLFE
Sbjct: 541 AIVDFILQKDGIQRTREVYKKFLRLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +AL TYGQDVSLWQEYY MESK+GSSETAAAI WRARKTLKDATA  T+SDL
Sbjct: 601 SALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Sed0000438 vs. NCBI nr
Match: KAG6594669.1 (U3 small nucleolar RNA-associated protein 6-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1127.5 bits (2915), Expect = 0.0e+00
Identity = 576/652 (88.34%), Postives = 618/652 (94.79%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY++YIDY
Sbjct: 52  MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 111

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           ETHLDSLRRLRKKA +RELK+QGNKKMRKSVSDFACVKRILY+YRL V+RYKGDID+WF+
Sbjct: 112 ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR 171

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+TNVDAARSLMLSGLRVCP
Sbjct: 172 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 231

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSIGEE 240
           TSEDLWVEYLRMELTYLNKLKARKVALGED+GSLVREN+  E+KQWREENKDLFMSIGE+
Sbjct: 232 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 291

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           +ED+D SV ETESKNKLDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 292 REDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 351

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEE+HSKILQD+KRDFGT PQYWDWLAR QYNP+++QGM DKKENS+IEKA QVYEEGLE
Sbjct: 352 SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQVYEEGLE 411

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
            VPSSA+FSLYVEFLMNII TS K EQ+  LSS TM+ TSRLL VYEKALT GHI+D L+
Sbjct: 412 HVPSSAMFSLYVEFLMNII-TSVKEEQSSGLSSCTMNTTSRLLMVYEKALTLGHITDDLS 471

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYVSFYLQ+G+LDEARKLAE+LCSG+LSNSVKLWVLRVS EIK ILKDSPS SKDDLKS
Sbjct: 472 CQYVSFYLQLGKLDEARKLAERLCSGKLSNSVKLWVLRVSTEIKSILKDSPSSSKDDLKS 531

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTKEVLRDF VS+SGSLWLTVLKFFANQS+YFD+LVEISLLALAKSGGS DG SLSS
Sbjct: 532 IFELTKEVLRDFPVSESGSLWLTVLKFFANQSHYFDQLVEISLLALAKSGGSEDGFSLSS 591

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
           AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIY  CIQLESNLASAGDK+GLA+ARKLFE
Sbjct: 592 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYRRCIQLESNLASAGDKNGLASARKLFE 651

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           ++L TYGQDVSLWQEYY MESK+GSSETAAAI WRARKTLKDATA  T+SDL
Sbjct: 652 SSLATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 702

[Close]
BLAST of Sed0000438 vs. NCBI nr
Match: XP_022926883.1 (U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita moschata])

HSP 1 Score: 1124.0 bits (2906), Expect = 0.0e+00
Identity = 576/652 (88.34%), Postives = 618/652 (94.79%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY++YIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           ETHLDSLRRLRKKA +RELK+QGNKKMRKSVSDFACVKRILY+YRL V+RYKGDID+WF+
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPKVPGVW+YAAAWEFDH+TNVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWVYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSIGEE 240
           TSEDLWVEYLRMELTYLNKLKARKVALGED+GSLVREN+  E+KQWREENKDLFMSIGE+
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           +ED+D SV ETESKNKLDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEE+HSKILQD+KRDFGT PQYWDWLAR QYNP+++QGM DKKENS+IEKA QVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQVYEEGLE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
            VPSSA+FSLYVEFLMNII TS K EQ+  LSS TM+ TSRLL VYEKALT GHI+D LA
Sbjct: 361 HVPSSAMFSLYVEFLMNII-TSVKEEQSSGLSSCTMNTTSRLLMVYEKALTLGHITDDLA 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYVSFYLQ+G+LDEARKLAE+LCSG+LSNSVKLWVLRVS EIK ILKDSPSPS  DLKS
Sbjct: 421 CQYVSFYLQLGKLDEARKLAERLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPS--DLKS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTKEVLRDF VS+SGSLWLTVLKFFANQS+YFD+LVEISLLALAKSGGS DG SLSS
Sbjct: 481 IFELTKEVLRDFPVSESGSLWLTVLKFFANQSHYFDQLVEISLLALAKSGGSEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
           AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIY TCIQLESNLASAGDK+GLA+ARKLFE
Sbjct: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +AL TYGQDVSLWQEYY MESK+GSSETAAAI WRARKTLKD+TA  T+SDL
Sbjct: 601 SALATYGQDVSLWQEYYIMESKMGSSETAAAIRWRARKTLKDSTALATSSDL 649

[Close]
BLAST of Sed0000438 vs. NCBI nr
Match: XP_022142158.1 (U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia])

HSP 1 Score: 1117.1 bits (2888), Expect = 0.0e+00
Identity = 570/652 (87.42%), Postives = 609/652 (93.40%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL+Y+DY
Sbjct: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYVDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           ETHLDSLR LRKKA  RELK+QGNKKMRKS+SDFA VKRILY+YRL VTRYKGDID+WF+
Sbjct: 61  ETHLDSLRNLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCR ++NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRGQQNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSIGEE 240
           TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVREN+  EEKQWREENKDLFMSIGEE
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENRAAEEKQWREENKDLFMSIGEE 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           +E++D SVVETESK++LDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDL+H
Sbjct: 241 RENNDGSVVETESKDQLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLSH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEEMHSKILQD+KRDFGT PQYWDWLAR + NPEN+QGM D KE SQIEKA QVYEE LE
Sbjct: 301 SEEMHSKILQDLKRDFGTQPQYWDWLARLECNPENVQGMSDGKEISQIEKAVQVYEEALE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
           C+PSS +FSLYVEFLMNIIT   KG+ T  LSS+T++ITSRLL VYEKALT GHI++ L 
Sbjct: 361 CLPSSTMFSLYVEFLMNIITPV-KGKHTSGLSSYTVNITSRLLVVYEKALTLGHITEDLG 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYVSFYLQ+GRLDEARKLAE+LCSG+LSNSVKLWVLRVS EIKCILKDSPSPSKDD+KS
Sbjct: 421 CQYVSFYLQLGRLDEARKLAERLCSGKLSNSVKLWVLRVSNEIKCILKDSPSPSKDDMKS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTK+VLRDFSVS+S SLWL VL FFANQSYYFDKL+EISLLALAK GGS DG SLSS
Sbjct: 481 IFELTKDVLRDFSVSESESLWLVVLNFFANQSYYFDKLLEISLLALAKYGGSEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
            IVDFVLQKDGIQRTREVYKKFLGLPHPG A+Y TCIQLESNLASAGDKDGLANARKLFE
Sbjct: 541 TIVDFVLQKDGIQRTREVYKKFLGLPHPGRAMYRTCIQLESNLASAGDKDGLANARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +ALTTY QDVSLWQEY  ME+KIGSSETAAAI WRARKTLKDATA VT+SDL
Sbjct: 601 SALTTYDQDVSLWQEYCIMEAKIGSSETAAAIRWRARKTLKDATALVTSSDL 651

[Close]
BLAST of Sed0000438 vs. ExPASy Swiss-Prot
Match: Q9NYH9 (U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens OX=9606 GN=UTP6 PE=1 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.8e-42
Identity = 164/660 (24.85%), Postives = 288/660 (43.64%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY+++R    K+D+++Y+ Y
Sbjct: 1   MAEIIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKIQRRTLFKEDFINYVQY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           E +L  L + R+       K        K   + + V R+  V++    ++K D+ +W  
Sbjct: 61  EINLLELIQRRRTRIGYSFK--------KDEIENSIVHRVQGVFQRASAKWKDDVQLWLS 120

Query: 121 YLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVC 180
           Y+ FC+      R+ KV + ++  H   P +WI AA WE +   + ++AR L L  LR  
Sbjct: 121 YVAFCKKWATKTRLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFH 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQEEKQWREENKDLFMSIGEEK 240
           P    L+ EY RMEL +  KL+                 +E++++ + + D+      E 
Sbjct: 181 PECPKLYKEYFRMELMHAEKLR-----------------KEKEEFEKASMDV------EN 240

Query: 241 EDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAHS 300
            D  E +++ E              +   IY  ++  +  +      +L I +  D A  
Sbjct: 241 PDYSEEILKGE--------------LAWIIYKNSVSIIKGA-EFHVSLLSIAQLFDFA-- 300

Query: 301 EEMHSKILQDMKRDFGTGPQYWDWLARFQYNPEN-IQGMGDKKENSQI------EKAFQV 360
           +++  +I  D++      P  WD++AR +   E+  +     K+   +      E+   V
Sbjct: 301 KDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQTEEQPTTKQAKAVEVGRKEERCCAV 360

Query: 361 YEEGLECVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGH 420
           YEE ++ +P+ A++  Y+ F +   T   K   +  L    +    R +TV+ KA     
Sbjct: 361 YEEAVKTLPTEAMWKCYITFCLERFT---KKSNSGFLRGKRL---ERTMTVFRKAHELKL 420

Query: 421 ISDGLACQYVSFYLQIGRLDEARKLAEKLCSGE--LSNSVKLWVLRVSMEIKCILKDSPS 480
           +S+   CQY    + +   +  R+  E   +G     +S  +W L++      +L +S S
Sbjct: 421 LSE---CQYKQLSVSLLCYNFLREALEVAVAGTELFRDSGTMWQLKLQ-----VLIESKS 480

Query: 481 PSKDDLKSIFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGS 540
           P   D+  +FE   E            LW++  ++        D         LA  G  
Sbjct: 481 P---DIAMLFE---EAFVHLKPQVCLPLWISWAEWSEGAKSQEDTEAVFKKALLAVIG-- 540

Query: 541 GDGLSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGL 600
            D ++L +  +D+  +  G ++ R V+K         +  +   IQ E    S      +
Sbjct: 541 ADSVTLKNKYLDWAYRSGGYKKARAVFKSLQESRPFSVDFFRKMIQFEKEQESC----NM 586

Query: 601 ANARKLFEAALTTYGQ-DVSLWQEYYKME--SKIGSSETAAAISWRARKTL--KDATAFV 646
           AN R+ +E AL  +G  D  LW +Y K E    +G  E    I WRA K L  + A AFV
Sbjct: 601 ANIREYYERALREFGSADSDLWMDYMKEELNHPLGRPENCGQIYWRAMKMLQGESAEAFV 586

[Close]
BLAST of Sed0000438 vs. ExPASy Swiss-Prot
Match: Q8VCY6 (U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus OX=10090 GN=Utp6 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.2e-41
Identity = 160/656 (24.39%), Postives = 279/656 (42.53%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY++ R   LK+D+++Y+ Y
Sbjct: 1   MAEIIQERIEDRIPELEQLERIGLFSHAEIKAIIKKASDLEYKIHRRTLLKEDFINYVQY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           E +L  L + R+       K        K   +++ V R+  V+     ++K D+ +W  
Sbjct: 61  EINLLELIQRRRARIKYSFK--------KDEIEYSMVHRVQGVFGRASAKWKDDVQLWLS 120

Query: 121 YLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVC 180
           Y+ FC+       + K+ + ++  H   P +WI AA WE +   + ++AR L L  LR  
Sbjct: 121 YIVFCKKWGTKTHLSKIFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFH 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQEEKQWREENKDLFMSIGEEK 240
           P    L+ EY RMEL +  KL+  K                     +E +   M +G+  
Sbjct: 181 PECPKLYQEYFRMELMHAEKLRKEK---------------------QEFEKAAMDMGD-- 240

Query: 241 EDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAHS 300
            D  E +++ E              +   IY  +I  +  +      +L I +  D A  
Sbjct: 241 FDHPEEILKGE--------------LARIIYKNSISKIKGA-EFHVSLLAIAQLFDFA-- 300

Query: 301 EEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGD--KKENSQI------EKAFQ 360
           +++  +I  D++      P  WD++AR +   E+  G      K+   +      E+   
Sbjct: 301 KDLQKEIYDDLQALHTDDPLTWDYVARRELEIESQPGEEQPVSKQAKAVEMGRREERCCA 360

Query: 361 VYEEGLECVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSG 420
           VYEE ++ +P+ A++  Y+ F +     S K    P           R +  + KA    
Sbjct: 361 VYEEAVKALPTEAMWKCYITFCLE--RFSKKTSSVPLRGQR----LERTMLAFRKAHELK 420

Query: 421 HISDGLACQYVSFYLQIGRLDEARKLAEKLCSGEL-SNSVKLWVLRVSMEIKCILKDSPS 480
            +S+    Q++   L+     EA ++AE     EL  +SV +W  ++      +L DS S
Sbjct: 421 LLSEVQYKQWIDLLLRQDLFKEALQVAE--AGTELFKDSVTMWQTKLQ-----VLIDSKS 480

Query: 481 PSKDDLKSIFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGS 540
           P   D++  FE   E            LW++  ++  +     D         +A +G S
Sbjct: 481 P---DVEMRFE---EAFAHLKPQVCLPLWISWAEWSESAKSQEDTEAIFKKAIIAVTGAS 540

Query: 541 GDGLSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGL 600
              ++L    +D+  +  G ++ R V+K         +  +   +Q E       +   +
Sbjct: 541 --SVTLKEKYLDWAYRSGGYKKARAVFKSLQESRPFSVEFFRKMMQFEKE----QEPCKM 583

Query: 601 ANARKLFEAALTTYG-QDVSLWQEYYKME--SKIGSSETAAAISWRARKTLKDATA 644
            N R+ +E AL  +G  D  LW +Y K E     G  E    I WRA K L+  +A
Sbjct: 601 VNLREYYERALREFGTSDSDLWMDYIKEELNHPFGKPENCGQIYWRAMKMLQGQSA 583

[Close]
BLAST of Sed0000438 vs. ExPASy Swiss-Prot
Match: O60188 (U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp6 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 9.5e-28
Identity = 72/208 (34.62%), Postives = 116/208 (55.77%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MA+ VQ+ +E  V EL+DL ++ +F+R EI  I+K RR FE +L R      D+LSYI Y
Sbjct: 1   MAEKVQYYMEQSVPELEDLLEKNIFNRDEINNIIKTRRVFEEKLARRQVKLNDFLSYIQY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           E +L++LR  R K          N   + ++SD+A  +++L+++     ++ GD+ +W  
Sbjct: 61  EINLETLRAKRHKRL--------NITGKITISDYAGPRKVLFLFLRATNKFFGDVTLWLD 120

Query: 121 YLEFCRARKN-GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVC 180
           Y+ + +  K    + K+    ++ HP    +W+ A   EF  N NV AAR+LM   LR+ 
Sbjct: 121 YIHYAQKIKAVNIVGKICVAALQKHPNNAELWVVACDHEFSINANVSAARALMNRALRLN 180

Query: 181 PTSEDLWVEYLRMELTYLNKLKARKVAL 208
             +  +W  Y R+EL+Y+ KL AR   L
Sbjct: 181 QENPVIWAAYFRLELSYMTKLFARSQIL 200

[Close]
BLAST of Sed0000438 vs. ExPASy Swiss-Prot
Match: Q02354 (U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP6 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 1.8e-26
Identity = 78/270 (28.89%), Postives = 145/270 (53.70%), Query Frame = 0 

Query: 6   QFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDYETHLD 65
           ++ LE  + E+DDL ++GLF++ E++ I+K+R  FE+RL        DY+ YI+YE++++
Sbjct: 5   RYYLEQCIPEMDDLVEKGLFTKNEVSLIMKKRTDFEHRLNSRGSSINDYIKYINYESNVN 64

Query: 66  SLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQYLEFC 125
            LR  R K   +        K   S+SD++  +RI ++Y+    ++  D+  W  YL + 
Sbjct: 65  KLRAKRCKRILQ-------VKKTNSLSDWSIQQRIGFIYQRGTNKFPQDLKFWAMYLNYM 124

Query: 126 RARKN----GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCPT 185
           +AR N     ++  +  QL++ HP    +WI  A +E++ + N  + R++  +GLR  P 
Sbjct: 125 KARGNQTSYKKIHNIYNQLLKLHPTNVDIWISCAKYEYEVHANFKSCRNIFQNGLRFNPD 184

Query: 186 SEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQEEKQWREENKDLFMSIGEEKED 245
              LW EY++ EL ++ KL  R+  +G     L+ E ++E   + E K+       +  D
Sbjct: 185 VPKLWYEYVKFELNFITKLINRRKVMG-----LINEREQELDMQNEQKN------NQAPD 244

Query: 246 DDESVVETES-----KNKLDLFREQGSNIL 267
           +++S ++  S     K+KL+   E   ++L
Sbjct: 245 EEKSHLQVPSTGDSMKDKLNELPEADISVL 256

[Close]
BLAST of Sed0000438 vs. ExPASy Swiss-Prot
Match: Q54WN5 (U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum OX=44689 GN=utp6 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-25
Identity = 147/663 (22.17%), Postives = 278/663 (41.93%), Query Frame = 0 

Query: 3   DVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDYET 62
           D V F ++ +++E   L   G+ S++E  +I+K+R   E ++      K D+L+YI YE 
Sbjct: 2   DRVNFSIDQLLEETSKLVSLGIISKQECKDIMKKREYHEIKIFNRNSHKSDFLTYIKYEL 61

Query: 63  HLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQYL 122
            LD L   R KA   E   +    +R ++  F    +          ++  D  +W   L
Sbjct: 62  ELDRLFHKRGKAKNIEFDYRLRSALRHAIILFGSATK----------KFPKDEALWINAL 121

Query: 123 --EFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 182
                RA K G  +     L    P+   +W  AA +EF+ N N+  AR+L+ +G++   
Sbjct: 122 NIRMKRASKEGTGRLFSIALSNL-PRSAKLWKLAATFEFEVNKNIQNARNLIQAGIQFNK 181

Query: 183 TSEDLWVEYLRMELTYLNKLKAR----KVALGEDKGSLVRENQEEKQWREE-NKDLFMSI 242
           T + LW  +  MELTY++ L +        + E++   ++ N +  +  E+  KD F++ 
Sbjct: 182 TDKSLWHYFFLMELTYISLLFSDITFIDKKIEEEEEEAIKLNLDSLRKSEKIEKDEFITF 241

Query: 243 GEEKEDDDESVVETESKNKLDLFREQGSNILETIYDGAIE-ALPSSFSLRKRVLEIL-EA 302
           G+E       ++  +   +  L R Q   I + ++  AI+ ++   F  RK   +I  + 
Sbjct: 242 GKE-------ILSADKLKQSSLIRGQ---IAQIVFRKAIKSSIGQDFDFRKHFYKIASKF 301

Query: 303 MDLAHSEE--------MHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQ 362
           +D+    E        +  +IL+ +  DF    + + +LA  + +  +   +  +  NS 
Sbjct: 302 LDIGKDSENPMGAGELLQKEILESLVTDFPNDDKTYIFLASIEQSKSSEPSLLKRLNNST 361

Query: 363 IEKAFQVYEEGLECVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYE 422
                ++  +GL  + S +    Y+ F+  II      E     +    +IT  LL  Y+
Sbjct: 362 -----KILNQGLTIIKSESYLFNYIHFIRQIIVDIKLKE-----NKLIENITDILLKAYK 421

Query: 423 KALTSGHISDGLACQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCIL 482
            ++ +  + +     Y+   L++G+ ++A K++E+       NS +LW  R+++ IK   
Sbjct: 422 YSIDNNILKESGYQYYIELLLELGKTNDAIKVSEESVK-LFKNSNQLWNQRINLLIK--- 481

Query: 483 KDSPSPSKDDLKSIFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALA 542
                          E+  ++  + S ++           + N    F+  V+    +  
Sbjct: 482 --------------NEMVVKLFDNLSNNNE----------YNNIDKCFEMAVKNCTSSTT 541

Query: 543 KSGGSGDGLSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGL----AIYNTCIQLESNL 602
            +  S    S S+  +++  +   + +  + YKK + L    L      Y  CI  E   
Sbjct: 542 STTSSTSTSSSSNLFIEY-FKYQVVFKFDKDYKKIVDLFEKLLKQLDEFYQKCILYEEER 600

Query: 603 ASAGDKDGLANARKLFEAALT---TYGQDVSLWQEYYKMESK-IGSSETAAAISWRARKT 641
                 D     R L+E  L+      +DV +W  Y   E K  G  E A  I+ R +K+
Sbjct: 602 IEKNIND----IRSLYEKCLSIKEISSKDVDVWLNYRNFELKSAGDIERANTIATRGKKS 600

[Close]
BLAST of Sed0000438 vs. ExPASy TrEMBL
Match: A0A6J1KQP1 (U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496770 PE=3 SV=1)

HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 574/652 (88.04%), Postives = 620/652 (95.09%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY++YIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           ETHLDSLRRLRKKA +RELK+QGNKKMRKSVSDFACVKRILY+YRL V+RYKGDID+WF+
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+TNVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSIGEE 240
           TSEDLWVEYLRMELTYLNKLKARKVALGED+GSLVREN+  E+KQWREENKDLFMSIGE+
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           +ED+D SV ETESKNKLDLFRE+GSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEE+HSKILQD+KRDFGT PQYWDWLAR +YNP+++QGM DKK+NS+IEKA QVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLRYNPDDVQGMSDKKKNSRIEKAVQVYEEGLE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
            VPSSA+FSLYVEFLMN+I TS KGEQ+  LSS TM+ TSRLL VYEKALTSGHI+D LA
Sbjct: 361 HVPSSAMFSLYVEFLMNVI-TSVKGEQSSGLSSCTMNTTSRLLMVYEKALTSGHITDDLA 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYVSFY Q+G+LDEARKLA++LCSG+LSNSVKLWVLRVS EIK ILKDSPSPSKDDLKS
Sbjct: 421 CQYVSFYFQLGKLDEARKLAKRLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLKS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTKEVLRDFSVS+SGSLWLTVLKFFANQS+YFD+LVEISL ALAKSGGS DG SLSS
Sbjct: 481 IFELTKEVLRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLFALAKSGGSEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
           AIVDF+LQKDGIQRTREVYKKFL LPHPGLAIY TCIQLESNLASAGDK+GLA+ARKLFE
Sbjct: 541 AIVDFILQKDGIQRTREVYKKFLRLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +AL TYGQDVSLWQEYY MESK+GSSETAAAI WRARKTLKDATA  T+SDL
Sbjct: 601 SALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Sed0000438 vs. ExPASy TrEMBL
Match: A0A6J1EJG1 (U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita moschata OX=3662 GN=LOC111433863 PE=3 SV=1)

HSP 1 Score: 1124.0 bits (2906), Expect = 0.0e+00
Identity = 576/652 (88.34%), Postives = 618/652 (94.79%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY++YIDY
Sbjct: 1   MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           ETHLDSLRRLRKKA +RELK+QGNKKMRKSVSDFACVKRILY+YRL V+RYKGDID+WF+
Sbjct: 61  ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCRA+KNGRMKKVLAQLIRFHPKVPGVW+YAAAWEFDH+TNVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWVYAAAWEFDHDTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSIGEE 240
           TSEDLWVEYLRMELTYLNKLKARKVALGED+GSLVREN+  E+KQWREENKDLFMSIGE+
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           +ED+D SV ETESKNKLDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 REDNDGSVGETESKNKLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEE+HSKILQD+KRDFGT PQYWDWLAR QYNP+++QGM DKKENS+IEKA QVYEEGLE
Sbjct: 301 SEELHSKILQDIKRDFGTEPQYWDWLARLQYNPDDVQGMSDKKENSRIEKAVQVYEEGLE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
            VPSSA+FSLYVEFLMNII TS K EQ+  LSS TM+ TSRLL VYEKALT GHI+D LA
Sbjct: 361 HVPSSAMFSLYVEFLMNII-TSVKEEQSSGLSSCTMNTTSRLLMVYEKALTLGHITDDLA 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYVSFYLQ+G+LDEARKLAE+LCSG+LSNSVKLWVLRVS EIK ILKDSPSPS  DLKS
Sbjct: 421 CQYVSFYLQLGKLDEARKLAERLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPS--DLKS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTKEVLRDF VS+SGSLWLTVLKFFANQS+YFD+LVEISLLALAKSGGS DG SLSS
Sbjct: 481 IFELTKEVLRDFPVSESGSLWLTVLKFFANQSHYFDQLVEISLLALAKSGGSEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
           AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIY TCIQLESNLASAGDK+GLA+ARKLFE
Sbjct: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +AL TYGQDVSLWQEYY MESK+GSSETAAAI WRARKTLKD+TA  T+SDL
Sbjct: 601 SALATYGQDVSLWQEYYIMESKMGSSETAAAIRWRARKTLKDSTALATSSDL 649

[Close]
BLAST of Sed0000438 vs. ExPASy TrEMBL
Match: A0A6J1CMJ8 (U3 small nucleolar RNA-associated protein 6 homolog OS=Momordica charantia OX=3673 GN=LOC111012347 PE=3 SV=1)

HSP 1 Score: 1117.1 bits (2888), Expect = 0.0e+00
Identity = 570/652 (87.42%), Postives = 609/652 (93.40%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL+Y+DY
Sbjct: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYVDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           ETHLDSLR LRKKA  RELK+QGNKKMRKS+SDFA VKRILY+YRL VTRYKGDID+WF+
Sbjct: 61  ETHLDSLRNLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCR ++NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRGQQNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSIGEE 240
           TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVREN+  EEKQWREENKDLFMSIGEE
Sbjct: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENRAAEEKQWREENKDLFMSIGEE 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           +E++D SVVETESK++LDLFREQGSNILETIY+GAIEALPSSFSLRKRVLEILEAMDL+H
Sbjct: 241 RENNDGSVVETESKDQLDLFREQGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLSH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEEMHSKILQD+KRDFGT PQYWDWLAR + NPEN+QGM D KE SQIEKA QVYEE LE
Sbjct: 301 SEEMHSKILQDLKRDFGTQPQYWDWLARLECNPENVQGMSDGKEISQIEKAVQVYEEALE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
           C+PSS +FSLYVEFLMNIIT   KG+ T  LSS+T++ITSRLL VYEKALT GHI++ L 
Sbjct: 361 CLPSSTMFSLYVEFLMNIITPV-KGKHTSGLSSYTVNITSRLLVVYEKALTLGHITEDLG 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYVSFYLQ+GRLDEARKLAE+LCSG+LSNSVKLWVLRVS EIKCILKDSPSPSKDD+KS
Sbjct: 421 CQYVSFYLQLGRLDEARKLAERLCSGKLSNSVKLWVLRVSNEIKCILKDSPSPSKDDMKS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTK+VLRDFSVS+S SLWL VL FFANQSYYFDKL+EISLLALAK GGS DG SLSS
Sbjct: 481 IFELTKDVLRDFSVSESESLWLVVLNFFANQSYYFDKLLEISLLALAKYGGSEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
            IVDFVLQKDGIQRTREVYKKFLGLPHPG A+Y TCIQLESNLASAGDKDGLANARKLFE
Sbjct: 541 TIVDFVLQKDGIQRTREVYKKFLGLPHPGRAMYRTCIQLESNLASAGDKDGLANARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +ALTTY QDVSLWQEY  ME+KIGSSETAAAI WRARKTLKDATA VT+SDL
Sbjct: 601 SALTTYDQDVSLWQEYCIMEAKIGSSETAAAIRWRARKTLKDATALVTSSDL 651

[Close]
BLAST of Sed0000438 vs. ExPASy TrEMBL
Match: A0A0A0KJV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513630 PE=3 SV=1)

HSP 1 Score: 1081.6 bits (2796), Expect = 0.0e+00
Identity = 553/652 (84.82%), Postives = 596/652 (91.41%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL+YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDFEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           E  L+SLRRLRKKA  RELK+QG+KKM+KS+SDFA VKRILY+YRL VTRYKGDID+WF+
Sbjct: 61  EIQLESLRRLRKKAVARELKKQGDKKMKKSISDFAGVKRILYIYRLAVTRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGTMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVREN--QEEKQWREENKDLFMSIGEE 240
           TSEDLW+EYLRMELTYLNKLKARKVALGED+GSLVREN    EKQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAAEKQWREENKDLFMSMGET 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           + D+DES VET SK+KLDLFRE+GSN+LETIY GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDNDESGVETLSKDKLDLFREKGSNLLETIYSGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEEM SKILQD+KRDF + PQYWDWLAR   NPEN+QG  D KE S+IEKA +VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLYCNPENVQGTSDIKEISRIEKAVKVYEEGLE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
           CVPSSA+FSLYVEFL +II    KGEQT  LSSHT +ITSRLL VYEKALT GHI+D LA
Sbjct: 361 CVPSSAIFSLYVEFLRSIIVPV-KGEQTLGLSSHTDNITSRLLMVYEKALTLGHITDDLA 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYV FYL++GRLDEA+KLAE+LCSG+ SNSVKLWVLRVS EIKC+LKDSPSPSKDDLKS
Sbjct: 421 CQYVLFYLELGRLDEAQKLAERLCSGKFSNSVKLWVLRVSTEIKCVLKDSPSPSKDDLKS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTKEVL+ FSVS+SGSLWL VLKFFANQSYYFDKLVEISL ALAKSGG+ DG SLSS
Sbjct: 481 IFELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLYALAKSGGNEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
            IVDFVLQKDGIQRTREVYKKFLGLPHPGLA+Y TCIQLESNLA+AGDKDGLANARKLFE
Sbjct: 541 VIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +AL TYGQ+V LWQEYY +ESKIGSSETAAA+ WRARKTLKDATA  T+SDL
Sbjct: 601 SALATYGQNVRLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Sed0000438 vs. ExPASy TrEMBL
Match: A0A5D3CNA4 (U3 small nucleolar RNA-associated protein 6-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006370 PE=3 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 551/652 (84.51%), Postives = 596/652 (91.41%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL+YIDY
Sbjct: 1   MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           E  LDSLR LR+KA  RELK+QGNKKMR S+SDFA VKRILY+YRL V+RYKGDID+WF+
Sbjct: 61  EIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSRYKGDIDLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCP
Sbjct: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCP 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVREN--QEEKQWREENKDLFMSIGEE 240
           TSEDLW+EYLRMELTYLNKLKARKVALGED+GSLVREN    EKQWREENKDLFMS+GE 
Sbjct: 181 TSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGET 240

Query: 241 KEDDDESVVETESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEILEAMDLAH 300
           + D D S VET SKNKLDLFRE+GSNILETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Sbjct: 241 RGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH 300

Query: 301 SEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQVYEEGLE 360
           SEEM SKILQD+KRDF + PQYWDWLAR +YNPEN+QG  D KE S+IE+A +VYEEGLE
Sbjct: 301 SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLE 360

Query: 361 CVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSGHISDGLA 420
           C+PSSALFSLYV+FL +II    KGEQT  LSSHT +ITSRLL VYEKALT GHI+D LA
Sbjct: 361 CMPSSALFSLYVKFLRSIIVPV-KGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLA 420

Query: 421 CQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSPSKDDLKS 480
           CQYV FYL++GRLDEA++LA++LCSG+ SNSVKLW LRVS EIKC  KDSPSPSK+DLKS
Sbjct: 421 CQYVLFYLELGRLDEAQELAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKS 480

Query: 481 IFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSGDGLSLSS 540
           IFELTKEVL+ FSVS+SGSLWL VLKFFANQSYYFDKLVEISLLALAKSGG+ DG SLSS
Sbjct: 481 IFELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSS 540

Query: 541 AIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLANARKLFE 600
            IVDFVLQKDGIQ TREVYKKFLGLPHPGLA+Y TCIQLESNLA+AGDKDGLANARKLFE
Sbjct: 541 VIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFE 600

Query: 601 AALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFVTTSDL 651
           +ALTTYGQ+VSLWQEYY +ESKIGSSETAAA+ WRARKTLKDATA  T+SDL
Sbjct: 601 SALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL 651

[Close]
BLAST of Sed0000438 vs. TAIR 10
Match: AT4G28200.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). )

HSP 1 Score: 731.5 bits (1887), Expect = 6.0e-211
Identity = 377/654 (57.65%), Postives = 494/654 (75.54%), Query Frame = 0 

Query: 1   MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLSYIDY 60
           MADVVQ+RLE MVDELDDLE+R +F+R EIAEIVKQRRKFEYRLKRP PLK+D+++YIDY
Sbjct: 1   MADVVQYRLERMVDELDDLERREIFTRAEIAEIVKQRRKFEYRLKRPSPLKEDFIAYIDY 60

Query: 61  ETHLDSLRRLRKKAATRELKQQGNKKMRKSVSDFACVKRILYVYRLVVTRYKGDIDIWFQ 120
           E  LD LR+LR+K+  R  K    K+ +KSVSDFA V RI+ +YRL   RYKGDI++WF+
Sbjct: 61  EVKLDELRQLRRKSVARVTK----KRKKKSVSDFAGVARIVEIYRLATMRYKGDINLWFR 120

Query: 121 YLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNTNVDAARSLMLSGLRVCP 180
           YLEFC+ +++GRMKK LAQ IRFHPKV GVWIYAA+WEFD N NV AAR+LML+GLRVC 
Sbjct: 121 YLEFCKQKRHGRMKKALAQAIRFHPKVAGVWIYAASWEFDRNLNVTAARALMLNGLRVCS 180

Query: 181 TSEDLWVEYLRMELTYLNKLKARKVALGEDKGSLVRENQ--EEKQWREENKDLFMSI--- 240
            SEDLWVEYLRMELT+LNKLKARKVALGEDKGSLVR+ +  E++QW++ENK+LFMS+   
Sbjct: 181 NSEDLWVEYLRMELTFLNKLKARKVALGEDKGSLVRDTKTVEDEQWKDENKELFMSLDEK 240

Query: 241 -GEEKEDDDE-SVVE--TESKNKLDLFREQGSNILETIYDGAIEALPSSFSLRKRVLEIL 300
            G EKE++DE S+VE   +   K+D  +E+GSN+L+TIY GA+EA+PSSF LRKR LEIL
Sbjct: 241 EGNEKEENDEDSIVEDVEDVTEKVDFLKEKGSNVLQTIYSGAVEAIPSSFDLRKRFLEIL 300

Query: 301 EAMDLAHSEEMHSKILQDMKRDFGTGPQYWDWLARFQYNPENIQGMGDKKENSQIEKAFQ 360
           EA DLAHS+EM + IL D+KRDF   P+YW+WLAR + +       G +  N Q++KA Q
Sbjct: 301 EATDLAHSDEMRNTILSDLKRDFCNEPEYWNWLARHEMSGCISNEAGLEFANPQMQKAIQ 360

Query: 361 VYEEGLECVPSSALFSLYVEFLMNIITTSDKGEQTPALSSHTMSITSRLLTVYEKALTSG 420
           V+EEGL+ V SS++F +Y+ FLM  I  S+  E    +SS +  I S ++ VY+KA  +G
Sbjct: 361 VFEEGLQTVTSSSMFEIYINFLMEAIVQSNGDEN--EISSLSNPIISHIINVYQKADETG 420

Query: 421 HISDGLACQYVSFYLQIGRLDEARKLAEKLCSGELSNSVKLWVLRVSMEIKCILKDSPSP 480
            +++ LA +YVS YL++ +  EA+KLAEKLCS + + S KLW+ RVS+EI+  L ++ SP
Sbjct: 421 CLTEELADEYVSLYLKLEKTHEAQKLAEKLCSEKFAGSAKLWLSRVSIEIRS-LSENSSP 480

Query: 481 SKDDLKSIFELTKEVLRDFSVSDSGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGSG 540
           SK D +++FEL    LR   +S+S SLWL    FFA+Q  Y DKLVE+S+L+  KS GS 
Sbjct: 481 SKADFQTVFELLSNALRKVPISESESLWLMAFNFFAHQRTYLDKLVEMSILSATKSHGSD 540

Query: 541 DGLSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAIYNTCIQLESNLASAGDKDGLA 600
              SL+S +V FVL+  G    R++YK+FL LP P L +Y  CI++E+NL S GDKDGL+
Sbjct: 541 HVFSLASTVVKFVLETKGAHSARKIYKRFLALPGPSLVLYKGCIEIETNLISVGDKDGLS 600

Query: 601 NARKLFEAALTTYGQDVSLWQEYYKMESKIGSSETAAAISWRARKTLKDATAFV 646
           NARKL+++A+ +YGQDV LW+ YY +E+K+G+SETA  + WRARKTL ++  F+
Sbjct: 601 NARKLYDSAVASYGQDVELWKNYYSLETKLGTSETANGVYWRARKTLNESADFI 647

The following BLAST results are available for this feature:
BLAST of Sed0000438 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023517938.10.0e+0088.50U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo][more]
XP_023003045.10.0e+0088.04U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita maxima][more]
KAG6594669.10.0e+0088.34U3 small nucleolar RNA-associated protein 6-like protein, partial [Cucurbita arg... [more]
XP_022926883.10.0e+0088.34U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita moschata][more]
XP_022142158.10.0e+0087.42U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia][more]
BLAST of Sed0000438 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9NYH91.8e-4224.85U3 small nucleolar RNA-associated protein 6 homolog OS=Homo sapiens OX=9606 GN=U... [more]
Q8VCY61.2e-4124.39U3 small nucleolar RNA-associated protein 6 homolog OS=Mus musculus OX=10090 GN=... [more]
O601889.5e-2834.62U3 small nucleolar RNA-associated protein 6 OS=Schizosaccharomyces pombe (strain... [more]
Q023541.8e-2628.89U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ... [more]
Q54WN52.6e-2522.17U3 small nucleolar RNA-associated protein 6 homolog OS=Dictyostelium discoideum ... [more]
BLAST of Sed0000438 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KQP10.0e+0088.04U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1EJG10.0e+0088.34U3 small nucleolar RNA-associated protein 6 homolog OS=Cucurbita moschata OX=366... [more]
A0A6J1CMJ80.0e+0087.42U3 small nucleolar RNA-associated protein 6 homolog OS=Momordica charantia OX=36... [more]
A0A0A0KJV90.0e+0084.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513630 PE=3 SV=1[more]
A0A5D3CNA40.0e+0084.51U3 small nucleolar RNA-associated protein 6-like protein OS=Cucumis melo var. ma... [more]
BLAST of Sed0000438 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G28200.16.0e-21157.65FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED I... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 128..160
e-value: 13.0
score: 14.6
coord: 548..580
e-value: 25.0
score: 12.6
coord: 344..375
e-value: 0.28
score: 20.3
coord: 588..620
e-value: 7.7E-4
score: 28.8
coord: 429..462
e-value: 180.0
score: 6.3
coord: 163..195
e-value: 0.002
score: 27.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 534..648
e-value: 8.2E-7
score: 31.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 237..509
e-value: 1.2E-10
score: 43.0
coord: 49..207
e-value: 1.9E-14
score: 55.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 540..639
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 29..205
IPR013949U3 small nucleolar RNA-associated protein 6PFAMPF08640U3_assoc_6coord: 9..98
e-value: 1.1E-25
score: 89.5
NoneNo IPR availablePANTHERPTHR23271:SF1U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 HOMOLOGcoord: 1..641
NoneNo IPR availablePANTHERPTHR23271HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66coord: 1..641

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0000438.1Sed0000438.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006396 RNA processing
cellular_component GO:0034388 Pwp2p-containing subcomplex of 90S preribosome
cellular_component GO:0032040 small-subunit processome
molecular_function GO:0005515 protein binding
molecular_function GO:0030515 snoRNA binding