Sed0000423 (gene) Chayote v1

Overview


Name	Sed0000423
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Carbamoyl-phosphate synthase small chain
Location	LG01: 427033 .. 430920 (-)
RNA-Seq Expression	Sed0000423
Synteny	Sed0000423

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAACAACCCTAAACCCAGGCCTCGGCTCAAAGCAACTGAACCACAACCAGAGGCAGGCGGAAGCATCAAAAGTTGATGCCACTCGAGAGGTAATCTCTCTTTTTCTATAATGCGATGAGCCGACTTTCCATTTCTCAGTGCGTTTTGATGTGGATGTGTGTGTTCCGTAGCGATTCGTTGTTTTCCAGCTTGAACTTTGATTCTAACTTGCTCGCCTTTTCGATTTCACAGTTTCTTTGTAATCTCCGCTTCTTTTGGATTTCGCAGTTCCTTTGAAGCCGAATTTCATCAATGGCGATCAGAGTTTTGGACTTGGTGTCCGGCGCCTCGCTCAATTGTTTCCACTTCAAAAATACCAGAGGACTTGTAAAATCTAGAGATTCCACTATCCGATGCTCTGCTCCTCTCTCTTCCCAAGGCGCTGCCACCATTGGTACTGTATGGAATCCCCTTCTTGCGTGTGTAGTTTATTCAATTACTGTTTGAATGGTTTTGAATTTGTTCGGTTGTTTTAAGACTTGGGAGAGAGGCCGTGGAAGGTATCGGACGCTCGGTTGGTGCTTGAAGATGGCTCAGTTTGGAGGGCTAAGTCTTTTGGCGCTTCCGGAACCCAAGTTGGTGAAGTGGTTTTCAATACTTCTTTGACTGGGTAAGAATGGTTGGGCAAGTTTTTACCTGATTCTACTGTAAATATCATGCCATTTGAGCAATTACTGTTCTGTTTACTTATTTCATGTTTCACCTTCAACCATGATCCCTTGGGTGTTTGGATGAGTAGTTGCATGAGTACTTATTTTGAGTGATTAGAAATTGAAGTTGTAGTAATAGTTTGTTTAGATGCGGATTTTGTAGAGGGATTGCAGAAATGACTTGTTAGAAATGGGTAATTTTGAAATGAGTAGCTTATTTTGAGTGATTGGAAATGAGTAGTTATTTTTTAGTGGTTGTAACTCCTCTCCAAAACCAAAAGTCTAACACTTGAGTTCTCAGGTGCGAAACCATGATTGAACTTAATTGTAAAATTTCCTAGTCTTTCGGTCGGGCATGGGTACCCCGGGTATGTAGTGGGGCGAGCTCTGGTTCCTCTTTATTAGAAAAGAAACTTGAATCATGACCCCTTCATATCAGCTATTGGGTTGATATCAGTTAAATTGTTACAGTCCAAATTAAATTTTGTGGTGTATGCTGAAATAGAAGGTGCTCAATTCAAACCATAAAATTGATTTTAACCTATTTAATCGCAACTATTGATAACGGTGGGATTGCAGAATTAATAATTACTTGTGTTCCAATTGGGAATGATAAAAGTCTCTGTATGTCCTCTGGTTTTCTCTTTGCCAATTCTTTTGTTTCCTATGAGTTTAGCGATGATTATGAACTTTCTTTTTCACGTCTTAGTTGAAAATCACTGAAGTTCATCGATGCTTCTTGGCACAATGAATCATCTGCAGGTATCAAGAAATTCTAACAGATCCCAGCTATGCTGGACAGTTTGTCCTGATGACAAATCCTCATATTGGCAATACTGGTGTCAATTTCGGTAGGTTATGTCATCAAAATCTCTGCACTGCCTTGTCTTGTAAACTTTTTTTCATAATGTTGACTTTGAGTATCTTTTCCAATTAGATGATGAAGAAGCTAGGCAATGCTTCCTCGCTGGCCTGGTGATTAGAAGCTTAAGCATTAGGTGGATTTCCTTATTTTGCTCTATTTTACCAAATCATTTAATCAGTCAATTAGCCTAATCATGACTTATGGACTTGATTGTTCCCCTTATTTCTAGCACTTCGAATTGGAGGTGTAAACAGACGCTTGGTGATTACTTAACAGAGAGAAACATAATGGGAATTTGTAAGTCAATTCATGTTGGGATTTTTTTAGGACTGTATGTTTAATCATTTAAATTCGATAATGCTGTTTTTTTTTCTCTAATCTATAAGAGTATGGGTTTCGTCATGGAGCAGATGATGTTGACACTCGTGCTATTACTCGTTGGTTAAGGGAAGATGGAAGTCTTATTGGTGTTTTAAGCACTGAAAAATCAAAATCTGACGATGAGCTATTGGAAATGTCTCGGTCATGGGACATTGTTGGTAAGAAATAAGAATTGGGTGTAATGATGCAATTTTGTAATATTCATAAAATGCTGGAAGGCATGAGTGATATTCTATTTTTGCTTTTGTTTGGCAGGTGTTGACTTAATTAGTGGTGTTTCTTGCAAATCTCCTTATGAATGGGTGGATAGAACAGATTTGGAATGGGAGTTCAAATCTGGTGGGCAAGCATCAGATACCTTCCATGTGAGTGTGGAAAAACCTAAAGATGATATTACTATTACCTAGACACGTTCGTATTTTATTACTTGGCACAATGCTTATATTGTTATTTTGTCTTGAAAAAGGTTGTGGCATATGATTTTGGTATCAAGAGTAACATACTTAGGCGCTTGGCTTCTTACGGATGCAAAATCACTGTTGTCCCTTCAACATGGCCGGCATCAGAGACCTTAAAGTTGAAGCCAGATGGGGTTCTCTTCAGCAATGGACCTGGTGATCCTTCTGCAGTTCCTTATGCTGTTGAAACAGTCAAGCAACTACTTGGGAAGGTACCTGTTTTTGGAATTTGTATGGGCCATCAATTACTTGGGCAGGCCTTGGGTGGTAAGACCTTCAAAATGAAATTTGGTCATCATGGTGGAAATCATCCCGTTCGCAACTTCCGGAACGACCGTGTAGAAATTAGTGCTCAGGTGTGCTTGTTGTTGAAGCTTATCAACTTCAAATCTGCTCTCTGTTCTACAGTTTTCTAATTATCTAGACTTCATTTTGTTTACATGCACTTATGTATTCTTTGTGGCAGAATCACAACTATGCAGTTGACCCTGAATCCCTTCCAGAGGGTGTTGAAGTAACCCACATCAATCTTAATGATGGAAGCTGTGCTGGTCTTGCTTACCCAAAACTAAAGATTATGTCTCTTCAATACCATCCTGAAGCATCACCCGGACCTCATGATTCTGACTCTGGTAACAAACATTTTATTTCGAATATTTGTTTGTTTCCTATTTTTGTTTTTGAACTTTTGATTCTTAAATTTTTATTCACAATCCGTTTTGGCATCCTTACTAGTAGATTCTCTTTATATTAGAGATTGAATGTGGAAGCCTGTGGCAGTTGGGTGAAAAAGTGATGTCATACAAGGTTTTTTTTTTTTTTTTGAGATGTCATACTAAGTTAAAAAGGGATGAAATAGAAATGAGTTTAAAGGGCAAGAGGCTAAAATAAAATTGAAATAGTTTAGGGGTTAGAATAGATAATAAGTAGAAATCTATGGACTAAGAAACATCCAAACAATAAATGAATGTATGGAAATTTGTTTTCACCAAATGTTGTAATCGGTACACGTGCCTTATTGTTTACATGTGTCATATGCATTACTGTTAAAATCTAATCAACAAAAAGGTGTGATATGATTTGCAAGGAGATTTTGAATTGTAAAATGAACCGACTTCAAAATAGAATTTGTTCGAGTTTGTGACTGACTAAAACCAAAATTATTTGGTTGCAGTATTTGGAGATTTCATAGAGATGATGAAGCAAGAGAAGAGAAATGGTTGATGTGATAAGATCAAATCAGGCTTTTCTCTCAAAATGAGGTTGCTGTTGGTGGCAGTGTTAAGAAAAGGGGATGTAATATATTTTCCTTTTGATATAACTTTGAGTTTTATCATTGTAGTATCTCAAGCCAGATGTGGTTTGTTTGAAATATAAAAATAATTTATATTTTTAATTTTAAATGAAATGAGAAGATTACAGTATTTGTCTTTTCATTTCCTTGAATTTTGAAAAAGAAATAAAGAGAAGTATGCTTGCATTGTGGAAGGC

mRNA sequence

AAGAAAACAACCCTAAACCCAGGCCTCGGCTCAAAGCAACTGAACCACAACCAGAGGCAGGCGGAAGCATCAAAAGTTGATGCCACTCGAGAGTTCCTTTGAAGCCGAATTTCATCAATGGCGATCAGAGTTTTGGACTTGGTGTCCGGCGCCTCGCTCAATTGTTTCCACTTCAAAAATACCAGAGGACTTGTAAAATCTAGAGATTCCACTATCCGATGCTCTGCTCCTCTCTCTTCCCAAGGCGCTGCCACCATTGACTTGGGAGAGAGGCCGTGGAAGGTATCGGACGCTCGGTTGGTGCTTGAAGATGGCTCAGTTTGGAGGGCTAAGTCTTTTGGCGCTTCCGGAACCCAAGTTGGTGAAGTGGTTTTCAATACTTCTTTGACTGGGTATCAAGAAATTCTAACAGATCCCAGCTATGCTGGACAGTTTGTCCTGATGACAAATCCTCATATTGGCAATACTGGTGTCAATTTCGATGATGAAGAAGCTAGGCAATGCTTCCTCGCTGGCCTGGTGATTAGAAGCTTAAGCATTAGCACTTCGAATTGGAGGTGTAAACAGACGCTTGGTGATTACTTAACAGAGAGAAACATAATGGGAATTTATGATGTTGACACTCGTGCTATTACTCGTTGGTTAAGGGAAGATGGAAGTCTTATTGGTGTTTTAAGCACTGAAAAATCAAAATCTGACGATGAGCTATTGGAAATGTCTCGGTCATGGGACATTGTTGGTGTTGACTTAATTAGTGGTGTTTCTTGCAAATCTCCTTATGAATGGGTGGATAGAACAGATTTGGAATGGGAGTTCAAATCTGGTGGGCAAGCATCAGATACCTTCCATGTTGTGGCATATGATTTTGGTATCAAGAGTAACATACTTAGGCGCTTGGCTTCTTACGGATGCAAAATCACTGTTGTCCCTTCAACATGGCCGGCATCAGAGACCTTAAAGTTGAAGCCAGATGGGGTTCTCTTCAGCAATGGACCTGGTGATCCTTCTGCAGTTCCTTATGCTGTTGAAACAGTCAAGCAACTACTTGGGAAGGTACCTGTTTTTGGAATTTGTATGGGCCATCAATTACTTGGGCAGGCCTTGGGTGGTAAGACCTTCAAAATGAAATTTGGTCATCATGGTGGAAATCATCCCGTTCGCAACTTCCGGAACGACCGTGTAGAAATTAGTGCTCAGAATCACAACTATGCAGTTGACCCTGAATCCCTTCCAGAGGGTGTTGAAGTAACCCACATCAATCTTAATGATGGAAGCTGTGCTGGTCTTGCTTACCCAAAACTAAAGATTATGTCTCTTCAATACCATCCTGAAGCATCACCCGGACCTCATGATTCTGACTCTGTATTTGGAGATTTCATAGAGATGATGAAGCAAGAGAAGAGAAATGGTTGATGTGATAAGATCAAATCAGGCTTTTCTCTCAAAATGAGGTTGCTGTTGGTGGCAGTGTTAAGAAAAGGGGATGTAATATATTTTCCTTTTGATATAACTTTGAGTTTTATCATTGTAGTATCTCAAGCCAGATGTGGTTTGTTTGAAATATAAAAATAATTTATATTTTTAATTTTAAATGAAATGAGAAGATTACAGTATTTGTCTTTTCATTTCCTTGAATTTTGAAAAAGAAATAAAGAGAAGTATGCTTGCATTGTGGAAGGC

Coding sequence (CDS)

ATGGCGATCAGAGTTTTGGACTTGGTGTCCGGCGCCTCGCTCAATTGTTTCCACTTCAAAAATACCAGAGGACTTGTAAAATCTAGAGATTCCACTATCCGATGCTCTGCTCCTCTCTCTTCCCAAGGCGCTGCCACCATTGACTTGGGAGAGAGGCCGTGGAAGGTATCGGACGCTCGGTTGGTGCTTGAAGATGGCTCAGTTTGGAGGGCTAAGTCTTTTGGCGCTTCCGGAACCCAAGTTGGTGAAGTGGTTTTCAATACTTCTTTGACTGGGTATCAAGAAATTCTAACAGATCCCAGCTATGCTGGACAGTTTGTCCTGATGACAAATCCTCATATTGGCAATACTGGTGTCAATTTCGATGATGAAGAAGCTAGGCAATGCTTCCTCGCTGGCCTGGTGATTAGAAGCTTAAGCATTAGCACTTCGAATTGGAGGTGTAAACAGACGCTTGGTGATTACTTAACAGAGAGAAACATAATGGGAATTTATGATGTTGACACTCGTGCTATTACTCGTTGGTTAAGGGAAGATGGAAGTCTTATTGGTGTTTTAAGCACTGAAAAATCAAAATCTGACGATGAGCTATTGGAAATGTCTCGGTCATGGGACATTGTTGGTGTTGACTTAATTAGTGGTGTTTCTTGCAAATCTCCTTATGAATGGGTGGATAGAACAGATTTGGAATGGGAGTTCAAATCTGGTGGGCAAGCATCAGATACCTTCCATGTTGTGGCATATGATTTTGGTATCAAGAGTAACATACTTAGGCGCTTGGCTTCTTACGGATGCAAAATCACTGTTGTCCCTTCAACATGGCCGGCATCAGAGACCTTAAAGTTGAAGCCAGATGGGGTTCTCTTCAGCAATGGACCTGGTGATCCTTCTGCAGTTCCTTATGCTGTTGAAACAGTCAAGCAACTACTTGGGAAGGTACCTGTTTTTGGAATTTGTATGGGCCATCAATTACTTGGGCAGGCCTTGGGTGGTAAGACCTTCAAAATGAAATTTGGTCATCATGGTGGAAATCATCCCGTTCGCAACTTCCGGAACGACCGTGTAGAAATTAGTGCTCAGAATCACAACTATGCAGTTGACCCTGAATCCCTTCCAGAGGGTGTTGAAGTAACCCACATCAATCTTAATGATGGAAGCTGTGCTGGTCTTGCTTACCCAAAACTAAAGATTATGTCTCTTCAATACCATCCTGAAGCATCACCCGGACCTCATGATTCTGACTCTGTATTTGGAGATTTCATAGAGATGATGAAGCAAGAGAAGAGAAATGGTTGA

Protein sequence

MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPLSSQGAATIDLGERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQASDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDFIEMMKQEKRNG

Homology

[Close]

BLAST of Sed0000423 vs. NCBI nr
Match: KAG7035263.1 (Carbamoyl-phosphate synthase small chain, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 859.0 bits (2218), Expect = 1.8e-245
Identity = 414/431 (96.06%), Postives = 421/431 (97.68%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPLSSQGAATIDLGERPWKVSDAR 60
           MAIRV+DLVSGASLNCFHFKN +G VKSRD TIRCS PLSS GAATIDLGERPWKVSDAR
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60

Query: 61  LVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 120
           LVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSY GQFVLMTNPHIGNTGVN
Sbjct: 61  LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120

Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLREDG 180
           FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180

Query: 181 SLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
           SLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240

Query: 241 DTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAVP 300
           +TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKL+PDGVLFSNGPGDPSAVP
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLEPDGVLFSNGPGDPSAVP 300

Query: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
           YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ
Sbjct: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360

Query: 361 NHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
           NHNYAVDP SLPEGVEVTH+NLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420

Query: 421 IEMMKQEKRNG 432
           IEMMKQEKRNG
Sbjct: 421 IEMMKQEKRNG 431

[Close]

BLAST of Sed0000423 vs. NCBI nr
Match: XP_022947190.1 (carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 857.8 bits (2215), Expect = 3.9e-245
Identity = 413/431 (95.82%), Postives = 421/431 (97.68%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPLSSQGAATIDLGERPWKVSDAR 60
           MAIRV+DLVSGASLNCFHFKN +G VKSRD TIRCS PLSS GAATIDLGERPWKVSDAR
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60

Query: 61  LVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 120
           LVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSY GQFVLMTNPHIGNTGVN
Sbjct: 61  LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120

Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLREDG 180
           FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180

Query: 181 SLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
           SLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240

Query: 241 DTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAVP 300
           +TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKL+PDGVLFSNGPGDPSAVP
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLEPDGVLFSNGPGDPSAVP 300

Query: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
           YAVETVKQL+GKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ
Sbjct: 301 YAVETVKQLVGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360

Query: 361 NHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
           NHNYAVDP SLPEGVEVTH+NLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420

Query: 421 IEMMKQEKRNG 432
           IEMMKQEKRNG
Sbjct: 421 IEMMKQEKRNG 431

[Close]

BLAST of Sed0000423 vs. NCBI nr
Match: XP_023532073.1 (LOW QUALITY PROTEIN: carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 857.4 bits (2214), Expect = 5.1e-245
Identity = 413/431 (95.82%), Postives = 420/431 (97.45%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPLSSQGAATIDLGERPWKVSDAR 60
           MAIRV+DLVSGASLNCFHFKN +G VKSRD TIRCS PLSS GAATIDLGERPWKVSDAR
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60

Query: 61  LVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 120
           LVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSY GQFVLMTNPHIGNTGVN
Sbjct: 61  LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120

Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLREDG 180
           FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180

Query: 181 SLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
           SLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240

Query: 241 DTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAVP 300
           +TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKLKPDGVLFSNGPG PSAVP
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGXPSAVP 300

Query: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
           YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ
Sbjct: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360

Query: 361 NHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
           NHNYAVDP SLPEGVEVTH+NLNDGSCAGLAYPKLK+MSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKVMSLQYHPEASPGPHDSDSVFGDF 420

Query: 421 IEMMKQEKRNG 432
           IEMMKQEKRNG
Sbjct: 421 IEMMKQEKRNG 431

[Close]

BLAST of Sed0000423 vs. NCBI nr
Match: XP_023007174.1 (carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] >XP_023007175.1 carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] >XP_023007176.1 carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 857.1 bits (2213), Expect = 6.7e-245
Identity = 413/431 (95.82%), Postives = 419/431 (97.22%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPLSSQGAATIDLGERPWKVSDAR 60
           MAIRV+DLVSGASLNCFHFKN +G  KSRD TIRCS PL S GAATIDLGERPWKVSDAR
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNNKGFAKSRDFTIRCSVPLPSHGAATIDLGERPWKVSDAR 60

Query: 61  LVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 120
           LVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSY GQFVLMTNPHIGNTGVN
Sbjct: 61  LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120

Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLREDG 180
           FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180

Query: 181 SLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
           SLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240

Query: 241 DTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAVP 300
           +TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKLKPDGVLFSNGPGDPSAVP
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAVP 300

Query: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
           YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ
Sbjct: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360

Query: 361 NHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
           NHNYAVDP SLPEGVEVTH+NLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420

Query: 421 IEMMKQEKRNG 432
           IEMMKQEKRNG
Sbjct: 421 IEMMKQEKRNG 431

[Close]

BLAST of Sed0000423 vs. NCBI nr
Match: XP_038893406.1 (carbamoyl-phosphate synthase small chain, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 846.3 bits (2185), Expect = 1.2e-241
Identity = 410/432 (94.91%), Postives = 418/432 (96.76%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPLSS-QGAATIDLGERPWKVSDA 60
           MAIRV+DLVSGAS NCFHFKN +G VKSRD +IRCS PLSS  GAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASFNCFHFKNAKGYVKSRDFSIRCSVPLSSTHGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRED 180
           NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LRED
Sbjct: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
           GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTD EWEFKSGG +
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDSEWEFKSGGYS 240

Query: 241 SDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAV 300
           S TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SKTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRN+RVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNNRVEISA 360

Query: 361 QNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYA+DP SLPEGVEVTHINLNDGSCAGLA+PKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAIDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIEMMKQEKRNG 432
           FIEMMKQEKRNG
Sbjct: 421 FIEMMKQEKRNG 432

[Close]

BLAST of Sed0000423 vs. ExPASy Swiss-Prot
Match: Q6YV23 (Carbamoyl-phosphate synthase small chain, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CARA PE=2 SV=2)

HSP 1 Score: 668.7 bits (1724), Expect = 4.4e-191
Identity = 311/388 (80.15%), Postives = 354/388 (91.24%), Query Frame = 0


Query: 42  QGAATIDLG-ERPWKVSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDP 101
           Q    +D G +RPWK+SDARLVLEDGSVW+AKSFGASGTQVGEVVFNTSLTGYQEILTDP
Sbjct: 59  QSGTVVDDGVQRPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDP 118

Query: 102 SYAGQFVLMTNPHIGNTGVNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERN 161
           SYAGQFVLMTNPHIGNTGVN DDEE+ +CFLAGL+IR+LSI TSNWRC +TL +YL +RN
Sbjct: 119 SYAGQFVLMTNPHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNWRCTETLEEYLMKRN 178

Query: 162 IMGIYDVDTRAITRWLREDGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSP 221
           IMGIYDVDTRAITR LREDGSLIGVLST++S++DDELLEM+++W IVGVDLISGV+C +P
Sbjct: 179 IMGIYDVDTRAITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKIVGVDLISGVTCDAP 238

Query: 222 YEWVDRTDLEWEFKSGGQASDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETL 281
           YEW D+TD EWEFK  GQ++++FHVVAYDFGIK NILRRL SYGCKITVVP+ WPASE L
Sbjct: 239 YEWSDKTDSEWEFKK-GQSTESFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVL 298

Query: 282 KLKPDGVLFSNGPGDPSAVPYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGH 341
            LKPDGV FSNGPGDP+AVPYAV+TV++++GKVPVFGICMGHQL+GQALGGKTFKMKFGH
Sbjct: 299 NLKPDGVFFSNGPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALGGKTFKMKFGH 358

Query: 342 HGGNHPVRNFRNDRVEISAQNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSL 401
           HGGNHPV + R+ RV+ISAQNHNYAVDPESLPEGV+VTHINLND SCAGL YPK+K++SL
Sbjct: 359 HGGNHPVCDLRSGRVDISAQNHNYAVDPESLPEGVKVTHINLNDNSCAGLQYPKMKLLSL 418

Query: 402 QYHPEASPGPHDSDSVFGDFIEMMKQEK 429
           QYHPE+SPGPHDSD  FG+FIEMMK  +
Sbjct: 419 QYHPESSPGPHDSDLAFGEFIEMMKNNR 445

[Close]

BLAST of Sed0000423 vs. ExPASy Swiss-Prot
Match: Q9LVW7 (Carbamoyl-phosphate synthase small chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CARA PE=1 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 7.1e-189
Identity = 318/431 (73.78%), Postives = 369/431 (85.61%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCS-APLSSQGAATIDLGERPWKVSDA 60
           MA R L  V   SL+     + RG    R S IRCS +PL+   +  +   E+PW   +A
Sbjct: 3   MATRTLGFVLPTSLSSQPSFDRRG-GGFRVSVIRCSTSPLTFPTSGVV---EKPWTSYNA 62

Query: 61  RLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTNP IGNTGV
Sbjct: 63  RLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGV 122

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRED 180
           N DDEE+ QCFL GLVIR+LSISTSNWRC +TL DYLTER+IMG+YD+DTRAITR LRED
Sbjct: 123 NPDDEESGQCFLTGLVIRNLSISTSNWRCTKTLADYLTERDIMGVYDLDTRAITRRLRED 182

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
           GSLIGVLSTE+SK+DDELL+MSRSWDIVG+DLIS VSCKSPYEWVD+T+ EW+F +  + 
Sbjct: 183 GSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRD 242

Query: 241 SDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAV 300
             ++ V+AYDFGIK NILRRL+SYGC+ITVVPST+PA+E LK+ PDG+LFSNGPGDPSAV
Sbjct: 243 GKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPGDPSAV 302

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVK+LLGKVPV+GICMGHQLLGQALGGKTFKMKFGHHGGNHPVRN R  +VEISA
Sbjct: 303 PYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTGQVEISA 362

Query: 361 QNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDP SLP GVEVTH+NLNDGSCAGL++P++ +MSLQYHPEASPGPHDSD+ F +
Sbjct: 363 QNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFRE 422

Query: 421 FIEMMKQEKRN 431
           FIE+MK+ K++
Sbjct: 423 FIELMKRSKQS 429

[Close]

BLAST of Sed0000423 vs. ExPASy Swiss-Prot
Match: Q8YXQ7 (Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=carA PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 3.3e-109
Identity = 193/375 (51.47%), Postives = 260/375 (69.33%), Query Frame = 0


Query: 59  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 118
           A LVL DG+ +R  SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9   ALLVLADGTAYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYRGQIVVFTYPELGNTG 68

Query: 119 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRE 178
           VN +DEE+ +  + G + R++    SNWR  Q+L DYL + +I GI+ +DTRA+TR +R 
Sbjct: 69  VNPEDEESARPQVRGAIARNICHKPSNWRSTQSLPDYLKQHHIPGIFGIDTRALTRKIRM 128

Query: 179 DGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG- 238
            G++ G +STE     + L ++  + ++ G++L+  V+  + YEW D T   WEF   G 
Sbjct: 129 YGAMNGGISTEILDEAELLEQVQAAPNMAGLNLVREVTTSTVYEWSDPTTAVWEFNPDGT 188

Query: 239 -QASDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDP 298
            +  ++  VVA DFG+K NILRRLASYGC++ VVP+     E LK  PDG+  SNGPGDP
Sbjct: 189 VKNGESLTVVALDFGVKRNILRRLASYGCRVIVVPADTSPEEILKYNPDGIFLSNGPGDP 248

Query: 299 SAVPYAVETVKQLL-GKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRV 358
           SAV   + T K LL  + P+FGICMGHQ+LG ALG +TFK+KFGH G N P       RV
Sbjct: 249 SAVTEGITTAKALLESEKPIFGICMGHQILGHALGAETFKLKFGHRGLNQPAG--LTQRV 308

Query: 359 EISAQNHNYAVDPESLPEG-VEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSD 418
           EI++QNH++A+DP+SLPE  VE++H+NLND + AGL +  L I S+QYHPEASPGPHD+D
Sbjct: 309 EITSQNHSFAIDPDSLPEAVVEISHLNLNDRTVAGLRHKSLPIFSVQYHPEASPGPHDAD 368

Query: 419 SVFGDFIEMMKQEKR 430
            +F  F+  M+  K+
Sbjct: 369 YLFAQFVHQMRTTKQ 381

[Close]

BLAST of Sed0000423 vs. ExPASy Swiss-Prot
Match: P74587 (Carbamoyl-phosphate synthase small chain OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=carA PE=3 SV=2)

HSP 1 Score: 390.6 bits (1002), Expect = 2.3e-107
Identity = 193/373 (51.74%), Postives = 256/373 (68.63%), Query Frame = 0


Query: 59  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 118
           A LVL DG+ +   SFGA GT VGEVVFNT +TGYQE++TDPSY GQ V  T P +GNTG
Sbjct: 9   ALLVLADGTPYPGWSFGADGTTVGEVVFNTGMTGYQEVMTDPSYCGQIVTFTYPELGNTG 68

Query: 119 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRE 178
           VN +DEE+    + G+V R+++   SNWR  Q+L DYL E  I+GIY +DTRA+TR LR 
Sbjct: 69  VNAEDEESIHPHVKGVVARNITRRPSNWRSTQSLPDYLVEHKIIGIYGIDTRALTRKLRS 128

Query: 179 DGSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEF--KSG 238
            G++ G +STE  + +  L  +  +  + G++L+  V+    YEW D T+  W+F   + 
Sbjct: 129 IGAMNGGISTEILEPEALLHHIQAAPSMAGLNLVKEVTTHEVYEWTDSTNDHWQFGPVAE 188

Query: 239 GQASDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDP 298
            Q      VVA DFG+K NILRRLASYGC++ VVP++  A+E L+  PDG+  SNGPGDP
Sbjct: 189 QQGQPPLTVVALDFGVKRNILRRLASYGCRVIVVPASTSAAEILQYNPDGIFLSNGPGDP 248

Query: 299 SAVPYAVETVKQLL-GKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRV 358
           SAV   + T K+LL  K P+FGICMGHQ+LG +LG +TFK+KFGH G N P       +V
Sbjct: 249 SAVEEGIVTTKELLAAKKPMFGICMGHQVLGLSLGAETFKLKFGHRGLNQPCG--LEQQV 308

Query: 359 EISAQNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDS 418
           EI++QNH +AV   SL E VE+TH NLND + AGL + +L   S+QYHPEASPGPHD+D 
Sbjct: 309 EITSQNHGFAVTEGSLAEEVEITHFNLNDKTVAGLRHKELPFFSVQYHPEASPGPHDADY 368

Query: 419 VFGDFIEMMKQEK 429
           +F  F+++M+Q+K
Sbjct: 369 LFEKFVKLMRQQK 379

[Close]

BLAST of Sed0000423 vs. ExPASy Swiss-Prot
Match: C5BQ30 (Carbamoyl-phosphate synthase small chain OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=carA PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 5.2e-107
Identity = 197/372 (52.96%), Postives = 251/372 (67.47%), Query Frame = 0


Query: 59  ARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 118
           A LVLEDGSV+R  S GA+G  VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 13  AILVLEDGSVFRGVSIGATGKSVGEVVFNTSITGYQEILTDPSYARQIVTLTYPHIGNTG 72

Query: 119 VNFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRE 178
            N +DEE +  +  GLVIR L +  SN+R  Q+L  YL+ +NI+GI D+DTR +TR LR+
Sbjct: 73  TNSEDEECKTIWATGLVIRDLPLLASNFRNSQSLDQYLSSKNILGIADIDTRRLTRLLRD 132

Query: 179 DGSLIGVLSTEKSKSDDELLEMSRSW-DIVGVDLISGVSCKSPYEWVDRTDLEWEFKSG- 238
            G+L G +       + E LE +R +  + G+DL   VS K  Y+W D +   W+  SG 
Sbjct: 133 KGALAGCIMA-GDVDEAEALETARGFAGLQGMDLAKEVSTKDTYQWRDGS---WKLGSGY 192

Query: 239 -GQASDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGD 298
              A   F+VVAYD+G KSNILR L   GC +TVVP+  PA++ L + PDGV  SNGPGD
Sbjct: 193 APLAEKRFNVVAYDYGAKSNILRMLVDRGCDLTVVPAQTPAADVLAMNPDGVFLSNGPGD 252

Query: 299 PSAVPYAVETVKQLLGK-VPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDR 358
           P    YA++ +K LL + +P+FGIC+GHQLL  A G KT KMKFGHHGGNHPV+N +   
Sbjct: 253 PEPCDYAIDAIKVLLNENMPIFGICLGHQLLALASGAKTIKMKFGHHGGNHPVQNVKTGE 312

Query: 359 VEISAQNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSD 418
           V I++QNH +A D  +LP+ +E TH +L DGS  G+        S Q HPEASPGPHD+ 
Sbjct: 313 VMITSQNHGFAADESTLPDCLEATHKSLFDGSLQGIHRTDKPAFSFQGHPEASPGPHDAA 372

Query: 419 SVFGDFIEMMKQ 427
            +F  FIE+M+Q
Sbjct: 373 ELFDHFIELMQQ 380

[Close]

BLAST of Sed0000423 vs. ExPASy TrEMBL
Match: A0A6J1G657 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111451135 PE=3 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 1.9e-245
Identity = 413/431 (95.82%), Postives = 421/431 (97.68%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPLSSQGAATIDLGERPWKVSDAR 60
           MAIRV+DLVSGASLNCFHFKN +G VKSRD TIRCS PLSS GAATIDLGERPWKVSDAR
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNNKGFVKSRDFTIRCSVPLSSHGAATIDLGERPWKVSDAR 60

Query: 61  LVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 120
           LVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSY GQFVLMTNPHIGNTGVN
Sbjct: 61  LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120

Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLREDG 180
           FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180

Query: 181 SLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
           SLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240

Query: 241 DTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAVP 300
           +TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKL+PDGVLFSNGPGDPSAVP
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLEPDGVLFSNGPGDPSAVP 300

Query: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
           YAVETVKQL+GKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ
Sbjct: 301 YAVETVKQLVGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360

Query: 361 NHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
           NHNYAVDP SLPEGVEVTH+NLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420

Query: 421 IEMMKQEKRNG 432
           IEMMKQEKRNG
Sbjct: 421 IEMMKQEKRNG 431

[Close]

BLAST of Sed0000423 vs. ExPASy TrEMBL
Match: A0A6J1L483 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499747 PE=3 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 3.2e-245
Identity = 413/431 (95.82%), Postives = 419/431 (97.22%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPLSSQGAATIDLGERPWKVSDAR 60
           MAIRV+DLVSGASLNCFHFKN +G  KSRD TIRCS PL S GAATIDLGERPWKVSDAR
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNNKGFAKSRDFTIRCSVPLPSHGAATIDLGERPWKVSDAR 60

Query: 61  LVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 120
           LVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSY GQFVLMTNPHIGNTGVN
Sbjct: 61  LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYNGQFVLMTNPHIGNTGVN 120

Query: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLREDG 180
           FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LREDG
Sbjct: 121 FDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLREDG 180

Query: 181 SLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240
           SLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS
Sbjct: 181 SLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQAS 240

Query: 241 DTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAVP 300
           +TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKLKPDGVLFSNGPGDPSAVP
Sbjct: 241 ETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAVP 300

Query: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360
           YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ
Sbjct: 301 YAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISAQ 360

Query: 361 NHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420
           NHNYAVDP SLPEGVEVTH+NLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF
Sbjct: 361 NHNYAVDPASLPEGVEVTHVNLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGDF 420

Query: 421 IEMMKQEKRNG 432
           IEMMKQEKRNG
Sbjct: 421 IEMMKQEKRNG 431

[Close]

BLAST of Sed0000423 vs. ExPASy TrEMBL
Match: A0A1S3BDW8 (carbamoyl-phosphate synthase small chain, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488827 PE=3 SV=1)

HSP 1 Score: 845.9 bits (2184), Expect = 7.5e-242
Identity = 411/431 (95.36%), Postives = 419/431 (97.22%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPL-SSQGAATIDLGERPWKVSDA 60
           MAIRV+DLVSGASLNCFHFKN +G VKSR  +IRCS PL SSQGAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRSFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGSVW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRED 180
           NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LRED
Sbjct: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
           GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSPYEWVDRTDLEWEFKSGG +
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGHS 240

Query: 241 SDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAV 300
           S+TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360

Query: 361 QNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDP SLPEGVEVTHINLNDGSCAGLA+PKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIEMMKQEKRN 431
           FI MMKQEKRN
Sbjct: 421 FIAMMKQEKRN 431

[Close]

BLAST of Sed0000423 vs. ExPASy TrEMBL
Match: A0A6J1H064 (carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458831 PE=3 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 3.1e-240
Identity = 407/431 (94.43%), Postives = 418/431 (96.98%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPL-SSQGAATIDLGERPWKVSDA 60
           MAIRV+DLVSG SLNCFHFKN +G  KSRD +IRCS PL SS GAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGVSLNCFHFKNPKGHQKSRDFSIRCSVPLSSSHGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRED 180
           NFDDEEAR+CFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITR LRED
Sbjct: 121 NFDDEEARECFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
           GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWV+RT LEWEFKSGG +
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVNRTSLEWEFKSGGHS 240

Query: 241 SDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAV 300
           S+TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW A+ETLKLKPDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAATETLKLKPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFR+DRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRDDRVEISA 360

Query: 361 QNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDP SLPEGVEVTHINLNDGSCAGLA+PKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLAFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIEMMKQEKRN 431
           FIEMMKQEKRN
Sbjct: 421 FIEMMKQEKRN 431

[Close]

BLAST of Sed0000423 vs. ExPASy TrEMBL
Match: A0A0A0KV57 (Glutamine amidotransferase type-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G585380 PE=3 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 1.2e-239
Identity = 405/431 (93.97%), Postives = 417/431 (96.75%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCSAPL-SSQGAATIDLGERPWKVSDA 60
           MAIRV+DLVSGASLNCFHFKN +G VKSR  +IRCS PL SSQGAATIDLGERPWKVSDA
Sbjct: 1   MAIRVMDLVSGASLNCFHFKNPKGCVKSRGFSIRCSVPLSSSQGAATIDLGERPWKVSDA 60

Query: 61  RLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV
Sbjct: 61  RLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRED 180
           NFDDEEARQCFL GLVIRSLS+STSNWRCKQTLGDYL ERNIMGIYDVDTRAITR LRED
Sbjct: 121 NFDDEEARQCFLTGLVIRSLSVSTSNWRCKQTLGDYLIERNIMGIYDVDTRAITRRLRED 180

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
           GSLIGVLSTEKSKSDDELLEMSRSW+IVGVDLISGVSCKSP+EWVDRTDLEWEFKSGG +
Sbjct: 181 GSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPFEWVDRTDLEWEFKSGGHS 240

Query: 241 SDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAV 300
           S+TFHVVAYDFGIKSNILRRLASYGCKITVVPSTW ASETLKL PDGVLFSNGPGDPSAV
Sbjct: 241 SETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLNPDGVLFSNGPGDPSAV 300

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA
Sbjct: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360

Query: 361 QNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDP SLPEGVEVTHINLNDGSCAGL++PKLKIMSLQYHPEASPGPHDSDSVFGD
Sbjct: 361 QNHNYAVDPASLPEGVEVTHINLNDGSCAGLSFPKLKIMSLQYHPEASPGPHDSDSVFGD 420

Query: 421 FIEMMKQEKRN 431
           FI MMKQEKRN
Sbjct: 421 FIAMMKQEKRN 431

[Close]

BLAST of Sed0000423 vs. TAIR 10
Match: AT3G27740.1 (carbamoyl phosphate synthetase A )

HSP 1 Score: 661.4 bits (1705), Expect = 5.0e-190
Identity = 318/431 (73.78%), Postives = 369/431 (85.61%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCS-APLSSQGAATIDLGERPWKVSDA 60
           MA R L  V   SL+     + RG    R S IRCS +PL+   +  +   E+PW   +A
Sbjct: 3   MATRTLGFVLPTSLSSQPSFDRRG-GGFRVSVIRCSTSPLTFPTSGVV---EKPWTSYNA 62

Query: 61  RLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTNP IGNTGV
Sbjct: 63  RLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGV 122

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRED 180
           N DDEE+ QCFL GLVIR+LSISTSNWRC +TL DYLTER+IMG+YD+DTRAITR LRED
Sbjct: 123 NPDDEESGQCFLTGLVIRNLSISTSNWRCTKTLADYLTERDIMGVYDLDTRAITRRLRED 182

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
           GSLIGVLSTE+SK+DDELL+MSRSWDIVG+DLIS VSCKSPYEWVD+T+ EW+F +  + 
Sbjct: 183 GSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRD 242

Query: 241 SDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAV 300
             ++ V+AYDFGIK NILRRL+SYGC+ITVVPST+PA+E LK+ PDG+LFSNGPGDPSAV
Sbjct: 243 GKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPGDPSAV 302

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVK+LLGKVPV+GICMGHQLLGQALGGKTFKMKFGHHGGNHPVRN R  +VEISA
Sbjct: 303 PYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTGQVEISA 362

Query: 361 QNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDP SLP GVEVTH+NLNDGSCAGL++P++ +MSLQYHPEASPGPHDSD+ F +
Sbjct: 363 QNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFRE 422

Query: 421 FIEMMKQEKRN 431
           FIE+MK+ K++
Sbjct: 423 FIELMKRSKQS 429

[Close]

BLAST of Sed0000423 vs. TAIR 10
Match: AT3G27740.2 (carbamoyl phosphate synthetase A )

HSP 1 Score: 508.8 bits (1309), Expect = 4.2e-144
Identity = 259/431 (60.09%), Postives = 302/431 (70.07%), Query Frame = 0


Query: 1   MAIRVLDLVSGASLNCFHFKNTRGLVKSRDSTIRCS-APLSSQGAATIDLGERPWKVSDA 60
           MA R L  V   SL+     + RG    R S IRCS +PL+   +  +   E+PW   +A
Sbjct: 3   MATRTLGFVLPTSLSSQPSFDRRG-GGFRVSVIRCSTSPLTFPTSGVV---EKPWTSYNA 62

Query: 61  RLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGV 120
           RLVLEDGS+W AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTNP IGNTGV
Sbjct: 63  RLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGV 122

Query: 121 NFDDEEARQCFLAGLVIRSLSISTSNWRCKQTLGDYLTERNIMGIYDVDTRAITRWLRED 180
           N                                                           
Sbjct: 123 N----------------------------------------------------------- 182

Query: 181 GSLIGVLSTEKSKSDDELLEMSRSWDIVGVDLISGVSCKSPYEWVDRTDLEWEFKSGGQA 240
                         DDELL+MSRSWDIVG+DLIS VSCKSPYEWVD+T+ EW+F +  + 
Sbjct: 183 -------------PDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEWDFNTNSRD 242

Query: 241 SDTFHVVAYDFGIKSNILRRLASYGCKITVVPSTWPASETLKLKPDGVLFSNGPGDPSAV 300
             ++ V+AYDFGIK NILRRL+SYGC+ITVVPST+PA+E LK+ PDG+LFSNGPGDPSAV
Sbjct: 243 GKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSNGPGDPSAV 302

Query: 301 PYAVETVKQLLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVEISA 360
           PYAVETVK+LLGKVPV+GICMGHQLLGQALGGKTFKMKFGHHGGNHPVRN R  +VEISA
Sbjct: 303 PYAVETVKELLGKVPVYGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNNRTGQVEISA 357

Query: 361 QNHNYAVDPESLPEGVEVTHINLNDGSCAGLAYPKLKIMSLQYHPEASPGPHDSDSVFGD 420
           QNHNYAVDP SLP GVEVTH+NLNDGSCAGL++P++ +MSLQYHPEASPGPHDSD+ F +
Sbjct: 363 QNHNYAVDPASLPGGVEVTHVNLNDGSCAGLSFPEMNVMSLQYHPEASPGPHDSDNAFRE 357

Query: 421 FIEMMKQEKRN 431
           FIE+MK+ K++
Sbjct: 423 FIELMKRSKQS 357

[Close]

BLAST of Sed0000423 vs. TAIR 10
Match: AT1G25220.1 (anthranilate synthase beta subunit 1 )

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-13
Identity = 55/187 (29.41%), Postives = 93/187 (49.73%), Query Frame = 0


Query: 255 NILRRLASYGCKITVVPSTWPASETLKLK-PDGVLFSNGPGDPSAVPYAVETVKQLLGKV 314
           N+ + +   GC   V  +     E LK K P GVL S GPG P     +++TV +L   V
Sbjct: 87  NLCQYMGELGCHFEVYRNDELTVEELKKKNPRGVLISPGPGTPQDSGISLQTVLELGPLV 146

Query: 315 PVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVE----------ISAQNHN 374
           P+FG+CMG Q +G+A GGK  +  FG   G   + ++     E          I  + H+
Sbjct: 147 PLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFSGLSNPFIVGRYHS 206

Query: 375 YAVDPESLP-EGVEVTHINLNDGSCAGLAYPKLK-IMSLQYHPEASPGPHDSDSVFGDFI 429
             ++ ++ P + +EVT     DG      + K K I  +Q+HPE S    +  ++  +FI
Sbjct: 207 LVIEKDTFPSDELEVTAWT-EDGLVMAARHRKYKHIQGVQFHPE-SIITTEGKTIVRNFI 266

[Close]

BLAST of Sed0000423 vs. TAIR 10
Match: AT5G57890.1 (Glutamine amidotransferase type 1 family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-13
Identity = 54/187 (28.88%), Postives = 93/187 (49.73%), Query Frame = 0


Query: 255 NILRRLASYGCKITVVPSTWPASETLK-LKPDGVLFSNGPGDPSAVPYAVETVKQLLGKV 314
           N+ + +   GC   V  +     E LK  KP G+L S GPG P     +++TV +L   V
Sbjct: 84  NLCQYMGELGCHFEVYRNDELTVEELKRKKPRGLLISPGPGTPQDSGISLQTVLELGPLV 143

Query: 315 PVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVE----------ISAQNHN 374
           P+FG+CMG Q +G+A GGK  +  FG   G   + ++     E          +  + H+
Sbjct: 144 PLFGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFSGLSNPFLVGRYHS 203

Query: 375 YAVDPESLP-EGVEVTHINLNDGSCAGLAYPKLK-IMSLQYHPEASPGPHDSDSVFGDFI 429
             ++ +S P + +EVT     DG      + K K I  +Q+HPE S    +  ++  +FI
Sbjct: 204 LVIEKDSFPSDELEVTAWT-EDGLVMAARHRKYKHIQGVQFHPE-SIITTEGKTIVRNFI 263

[Close]

BLAST of Sed0000423 vs. TAIR 10
Match: AT1G25220.2 (anthranilate synthase beta subunit 1 )

HSP 1 Score: 74.3 bits (181), Expect = 2.6e-13
Identity = 55/185 (29.73%), Postives = 92/185 (49.73%), Query Frame = 0


Query: 257 LRRLASYGCKITVVPSTWPASETLKLK-PDGVLFSNGPGDPSAVPYAVETVKQLLGKVPV 316
           L+ +   GC   V  +     E LK K P GVL S GPG P     +++TV +L   VP+
Sbjct: 102 LQYMGELGCHFEVYRNDELTVEELKKKNPRGVLISPGPGTPQDSGISLQTVLELGPLVPL 161

Query: 317 FGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNFRNDRVE----------ISAQNHNYA 376
           FG+CMG Q +G+A GGK  +  FG   G   + ++     E          I  + H+  
Sbjct: 162 FGVCMGLQCIGEAFGGKIVRSPFGVMHGKSSMVHYDEKGEEGLFSGLSNPFIVGRYHSLV 221

Query: 377 VDPESLP-EGVEVTHINLNDGSCAGLAYPKLK-IMSLQYHPEASPGPHDSDSVFGDFIEM 429
           ++ ++ P + +EVT     DG      + K K I  +Q+HPE S    +  ++  +FI++
Sbjct: 222 IEKDTFPSDELEVTAWT-EDGLVMAARHRKYKHIQGVQFHPE-SIITTEGKTIVRNFIKI 281

The following BLAST results are available for this feature:

BLAST of Sed0000423 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035263.1	1.8e-245	96.06	Carbamoyl-phosphate synthase small chain, chloroplastic [Cucurbita argyrosperma ...	[more]
XP_022947190.1	3.9e-245	95.82	carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita moschata...	[more]
XP_023532073.1	5.1e-245	95.82	LOW QUALITY PROTEIN: carbamoyl-phosphate synthase small chain, chloroplastic-lik...	[more]
XP_023007174.1	6.7e-245	95.82	carbamoyl-phosphate synthase small chain, chloroplastic-like [Cucurbita maxima] ...	[more]
XP_038893406.1	1.2e-241	94.91	carbamoyl-phosphate synthase small chain, chloroplastic isoform X2 [Benincasa hi...	[more]

BLAST of Sed0000423 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YV23	4.4e-191	80.15	Carbamoyl-phosphate synthase small chain, chloroplastic OS=Oryza sativa subsp. j...	[more]
Q9LVW7	7.1e-189	73.78	Carbamoyl-phosphate synthase small chain, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q8YXQ7	3.3e-109	51.47	Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / SAG 25...	[more]
P74587	2.3e-107	51.74	Carbamoyl-phosphate synthase small chain OS=Synechocystis sp. (strain PCC 6803 /...	[more]
C5BQ30	5.2e-107	52.96	Carbamoyl-phosphate synthase small chain OS=Teredinibacter turnerae (strain ATCC...	[more]

BLAST of Sed0000423 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G657	1.9e-245	95.82	carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1L483	3.2e-245	95.82	carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A1S3BDW8	7.5e-242	95.36	carbamoyl-phosphate synthase small chain, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A6J1H064	3.1e-240	94.43	carbamoyl-phosphate synthase small chain, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A0A0KV57	1.2e-239	93.97	Glutamine amidotransferase type-1 domain-containing protein OS=Cucumis sativus O...	[more]

BLAST of Sed0000423 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27740.1	5.0e-190	73.78	carbamoyl phosphate synthetase A	[more]
AT3G27740.2	4.2e-144	60.09	carbamoyl phosphate synthetase A	[more]
AT1G25220.1	1.2e-13	29.41	anthranilate synthase beta subunit 1	[more]
AT5G57890.1	1.5e-13	28.88	Glutamine amidotransferase type 1 family protein	[more]
AT1G25220.2	2.6e-13	29.73	anthranilate synthase beta subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00097	ANTSNTHASEII	coord: 287..296 score: 48.91 coord: 399..412 score: 30.91 coord: 314..325 score: 55.0
None	No IPR available	PRINTS	PR00099	CPSGATASE	coord: 245..259 score: 55.8 coord: 314..330 score: 65.86 coord: 356..367 score: 58.15 coord: 331..348 score: 56.52 coord: 284..298 score: 64.35
None	No IPR available	PRINTS	PR00096	GATASE	coord: 287..296 score: 54.96 coord: 314..325 score: 62.32 coord: 399..412 score: 45.62
None	No IPR available	PANTHER	PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	coord: 29..429
None	No IPR available	PANTHER	PTHR11405:SF4	CARBAMOYL-PHOSPHATE SYNTHASE ARGININE-SPECIFIC SMALL CHAIN	coord: 29..429
None	No IPR available	PROSITE	PS51273	GATASE_TYPE_1	coord: 244..430 score: 29.757168
IPR002474	Carbamoyl-phosphate synthase small subunit, N-terminal domain	SMART	SM01097	CPSase_sm_chain_2	coord: 57..187 e-value: 8.4E-77 score: 271.1
IPR002474	Carbamoyl-phosphate synthase small subunit, N-terminal domain	PFAM	PF00988	CPSase_sm_chain	coord: 59..185 e-value: 1.1E-47 score: 161.0
IPR017926	Glutamine amidotransferase	PFAM	PF00117	GATase	coord: 248..422 e-value: 1.5E-46 score: 158.6
IPR006274	Carbamoyl-phosphate synthase, small subunit	TIGRFAM	TIGR01368	TIGR01368	coord: 59..426 e-value: 1.4E-148 score: 492.6
IPR006274	Carbamoyl-phosphate synthase, small subunit	HAMAP	MF_01209	CPSase_S_chain	coord: 57..428 score: 45.829971
IPR029062	Class I glutamine amidotransferase-like	GENE3D	3.40.50.880		coord: 206..429 e-value: 8.8E-72 score: 243.3
IPR029062	Class I glutamine amidotransferase-like	SUPERFAMILY	52317	Class I glutamine amidotransferase-like	coord: 237..426
IPR036480	Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily	GENE3D	3.50.30.20		coord: 56..205 e-value: 3.1E-55 score: 187.6
IPR036480	Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily	SUPERFAMILY	52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain	coord: 58..200
IPR035686	Carbamoyl-phosphate synthase small subunit, GATase1 domain	CDD	cd01744	GATase1_CPSase	coord: 245..421 e-value: 2.61447E-115 score: 332.924

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000423.1	Sed0000423.1	mRNA
Sed0000423.2	Sed0000423.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006526	arginine biosynthetic process
biological_process	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
biological_process	GO:0006541	glutamine metabolic process
cellular_component	GO:0005951	carbamoyl-phosphate synthase complex
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity