Sed0000386 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCCTTTTCCCCTTGAAAGTTTTCAAAAACATTGGCCATGCAGCCTAGTGAAATTGCAAGCCTCCACCATCTTCTTTTATCCACCCCATCTTTATATTCTTCTCAATTTAACATGTCCCAAGACAACACAAACATGAATCATCTTAATCAGTTTTGTAATCCATTATCAAGATTTCAATGTCCTTCTCAGGTGCAAGATATGAATCCACCATCCTTATGCAGTAACTCGACTTCTGATGAAGCCGAAGACCGACAACTAAGCCTCATCAATGAGAGGAAACGGAGGAGGATGATATCGAATCGAGAGTCTGCACGCCGATCTCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTTCTTTGGCTCCAGAATGAAAACCACCAGCTAATAGATAAGGTTAACCAAGTTTCCGAGTGTCATGATCGGGCTCGACAGGAGAACGAAGAGCTTAAGAAGGAAGTATCCGAACTTCGTCAAATGCTCACGGACTTCCAACTCCATCATCCATACCTACCTTGAAGAGATCCCTGAAGCATGAGTCTTAGATCCACTTTGTATTAGGTTTCAATCTTGAAAGTCTGAGTTAGAGGCAAAGTTTTTGACTTTATCTTTGCCAATAATTGTCCTTCTCTTTAATCTTTATGTAGATGCCAGGAAATCTTTACCTACCTCTGAAGTTGTACCAAACTTTAGAAAAATAAAGGTACTTATTTATCCTTCCCTTTGAAT CATCCTTTTCCCCTTGAAAGTTTTCAAAAACATTGGCCATGCAGCCTAGTGAAATTGCAAGCCTCCACCATCTTCTTTTATCCACCCCATCTTTATATTCTTCTCAATTTAACATGTCCCAAGACAACACAAACATGAATCATCTTAATCAGTTTTGTAATCCATTATCAAGATTTCAATGTCCTTCTCAGGTGCAAGATATGAATCCACCATCCTTATGCAGTAACTCGACTTCTGATGAAGCCGAAGACCGACAACTAAGCCTCATCAATGAGAGGAAACGGAGGAGGATGATATCGAATCGAGAGTCTGCACGCCGATCTCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTTCTTTGGCTCCAGAATGAAAACCACCAGCTAATAGATAAGGTTAACCAAGTTTCCGAGTGTCATGATCGGGCTCGACAGGAGAACGAAGAGCTTAAGAAGGAAGTATCCGAACTTCGTCAAATGCTCACGGACTTCCAACTCCATCATCCATACCTACCTTGAAGAGATCCCTGAAGCATGAGTCTTAGATCCACTTTGTATTAGGTTTCAATCTTGAAAGTCTGAGTTAGAGGCAAAGTTTTTGACTTTATCTTTGCCAATAATTGTCCTTCTCTTTAATCTTTATGTAGATGCCAGGAAATCTTTACCTACCTCTGAAGTTGTACCAAACTTTAGAAAAATAAAGGTACTTATTTATCCTTCCCTTTGAAT ATGCAGCCTAGTGAAATTGCAAGCCTCCACCATCTTCTTTTATCCACCCCATCTTTATATTCTTCTCAATTTAACATGTCCCAAGACAACACAAACATGAATCATCTTAATCAGTTTTGTAATCCATTATCAAGATTTCAATGTCCTTCTCAGGTGCAAGATATGAATCCACCATCCTTATGCAGTAACTCGACTTCTGATGAAGCCGAAGACCGACAACTAAGCCTCATCAATGAGAGGAAACGGAGGAGGATGATATCGAATCGAGAGTCTGCACGCCGATCTCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTTCTTTGGCTCCAGAATGAAAACCACCAGCTAATAGATAAGGTTAACCAAGTTTCCGAGTGTCATGATCGGGCTCGACAGGAGAACGAAGAGCTTAAGAAGGAAGTATCCGAACTTCGTCAAATGCTCACGGACTTCCAACTCCATCATCCATACCTACCTTGA MQPSEIASLHHLLLSTPSLYSSQFNMSQDNTNMNHLNQFCNPLSRFQCPSQVQDMNPPSLCSNSTSDEAEDRQLSLINERKRRRMISNRESARRSRMRKQKHLDELWSQVLWLQNENHQLIDKVNQVSECHDRARQENEELKKEVSELRQMLTDFQLHHPYLP Homology
BLAST of Sed0000386 vs. NCBI nr
Match: XP_038905338.1 (basic leucine zipper 43-like [Benincasa hispida]) HSP 1 Score: 267.3 bits (682), Expect = 8.6e-68 Identity = 139/163 (85.28%), Postives = 151/163 (92.64%), Query Frame = 0
BLAST of Sed0000386 vs. NCBI nr
Match: XP_022155056.1 (LOW QUALITY PROTEIN: basic leucine zipper 43-like [Momordica charantia]) HSP 1 Score: 261.2 bits (666), Expect = 6.2e-66 Identity = 136/161 (84.47%), Postives = 147/161 (91.30%), Query Frame = 0
BLAST of Sed0000386 vs. NCBI nr
Match: XP_004137148.1 (basic leucine zipper 43 [Cucumis sativus]) HSP 1 Score: 257.7 bits (657), Expect = 6.8e-65 Identity = 136/163 (83.44%), Postives = 149/163 (91.41%), Query Frame = 0
BLAST of Sed0000386 vs. NCBI nr
Match: XP_016901802.1 (PREDICTED: basic leucine zipper 43 [Cucumis melo] >TYJ99666.1 basic leucine zipper 43 [Cucumis melo var. makuwa]) HSP 1 Score: 256.5 bits (654), Expect = 1.5e-64 Identity = 137/164 (83.54%), Postives = 147/164 (89.63%), Query Frame = 0
BLAST of Sed0000386 vs. NCBI nr
Match: XP_022955729.1 (basic leucine zipper 43-like [Cucurbita moschata] >KAG7018187.1 Basic leucine zipper 43, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 253.8 bits (647), Expect = 9.8e-64 Identity = 134/163 (82.21%), Postives = 145/163 (88.96%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy Swiss-Prot
Match: Q9FMC2 (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 5.5e-25 Identity = 75/160 (46.88%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy Swiss-Prot
Match: Q9CA46 (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 6.1e-16 Identity = 52/118 (44.07%), Postives = 79/118 (66.95%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10 Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.5e-09 Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy TrEMBL
Match: A0A6J1DQJ9 (LOW QUALITY PROTEIN: basic leucine zipper 43-like OS=Momordica charantia OX=3673 GN=LOC111022194 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 3.0e-66 Identity = 136/161 (84.47%), Postives = 147/161 (91.30%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy TrEMBL
Match: A0A0A0KZE6 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G122810 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.3e-65 Identity = 136/163 (83.44%), Postives = 149/163 (91.41%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy TrEMBL
Match: A0A5D3BKJ6 (Basic leucine zipper 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00520 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 7.3e-65 Identity = 137/164 (83.54%), Postives = 147/164 (89.63%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy TrEMBL
Match: A0A1S4E0N4 (basic leucine zipper 43 OS=Cucumis melo OX=3656 GN=LOC103495718 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 7.3e-65 Identity = 137/164 (83.54%), Postives = 147/164 (89.63%), Query Frame = 0
BLAST of Sed0000386 vs. ExPASy TrEMBL
Match: A0A6J1GX45 (basic leucine zipper 43-like OS=Cucurbita moschata OX=3662 GN=LOC111457640 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.8e-64 Identity = 134/163 (82.21%), Postives = 145/163 (88.96%), Query Frame = 0
BLAST of Sed0000386 vs. TAIR 10
Match: AT3G30530.1 (basic leucine-zipper 42 ) HSP 1 Score: 135.2 bits (339), Expect = 4.7e-32 Identity = 89/169 (52.66%), Postives = 119/169 (70.41%), Query Frame = 0
BLAST of Sed0000386 vs. TAIR 10
Match: AT1G13600.1 (basic leucine-zipper 58 ) HSP 1 Score: 118.6 bits (296), Expect = 4.6e-27 Identity = 78/166 (46.99%), Postives = 110/166 (66.27%), Query Frame = 0
BLAST of Sed0000386 vs. TAIR 10
Match: AT5G15830.1 (basic leucine-zipper 3 ) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-26 Identity = 77/159 (48.43%), Postives = 110/159 (69.18%), Query Frame = 0
BLAST of Sed0000386 vs. TAIR 10
Match: AT5G38800.1 (basic leucine-zipper 43 ) HSP 1 Score: 115.5 bits (288), Expect = 3.9e-26 Identity = 75/160 (46.88%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of Sed0000386 vs. TAIR 10
Match: AT2G04038.1 (basic leucine-zipper 48 ) HSP 1 Score: 111.3 bits (277), Expect = 7.3e-25 Identity = 63/130 (48.46%), Postives = 94/130 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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