Sed0000378 (gene) Chayote v1

Overview
NameSed0000378
Typegene
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor CYCLOIDEA-like
LocationLG03: 7651790 .. 7652705 (-)
RNA-Seq ExpressionSed0000378
SyntenySed0000378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACATGTTTGATTCTAGTAACACCACTGAAATGAATCACTTCCTTTTGGATCAAGATCATAACAGCTCATATGATCATCTACATTTCCCAGATCCTTTTCTCGACGACGACGACCTATTTTTCAGCCGGTTTTTGTCCCAACAACAGCTCGTCAGCGGTGGCGATTTTCCAAAGGAACAAGACGAGACGAAGCAAATTTCGGCAACAAAGAAGAAGAAATGTAGAAAAATTGGAAGCTCTACAAAGAGAACAGGGAAGAAGGACAGACATAGTAAGATCTGCACAGCACAGGGCCCAAGAGACCGTAGAATGAGATTGTCCCTTCAAATTGCAAGGAAATTCTTCAACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCAAAACCATTGACTGGCTTCTCTCTAACTCTACCTCGGCAATTACGGATCTCAAACACCGCTTAAACGACAACAACAACGGCCGTAGCTATAGCTACGGCAGTGTCTGCTCGGGGTCGAGCGAGGTTATTAATAATGGTGGTGGTGGAGCTACAACAAAAGAAACGACCACAAGGCAGTTACGTATTGTTGCGAAAGAATCGAGGGATAGGGCAAGAGCTAGGGCAAGGCAAAGAACAATGTTGAAAAAAACTCATCAAGATCAAATCTTTGGTTTCAATTTCCAATATGGGAATTCAGATCAGCTTCAAGATCAGGACACCCATCACAAAGTTCTTGCCATTTCTGATCATGATCTCTCAGATTTTCCATCAATTCACAGATTTTTCTCAGGTAATAATAATGATGATACTCAATTGGAAAATCATGATTATTCATCTCTTTCTTGCCCTAATTCCATTTTCATGGCCTCCCCAATTCCCAAACCCTACTCTTTTTCTGATTCCACATTGCTCAATTGCCCTAATTTTAAATAA

mRNA sequence

CAACATGTTTGATTCTAGTAACACCACTGAAATGAATCACTTCCTTTTGGATCAAGATCATAACAGCTCATATGATCATCTACATTTCCCAGATCCTTTTCTCGACGACGACGACCTATTTTTCAGCCGGTTTTTGTCCCAACAACAGCTCGTCAGCGGTGGCGATTTTCCAAAGGAACAAGACGAGACGAAGCAAATTTCGGCAACAAAGAAGAAGAAATGTAGAAAAATTGGAAGCTCTACAAAGAGAACAGGGAAGAAGGACAGACATAGTAAGATCTGCACAGCACAGGGCCCAAGAGACCGTAGAATGAGATTGTCCCTTCAAATTGCAAGGAAATTCTTCAACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCAAAACCATTGACTGGCTTCTCTCTAACTCTACCTCGGCAATTACGGATCTCAAACACCGCTTAAACGACAACAACAACGGCCGTAGCTATAGCTACGGCAGTGTCTGCTCGGGGTCGAGCGAGGTTATTAATAATGGTGGTGGTGGAGCTACAACAAAAGAAACGACCACAAGGCAGTTACGTATTGTTGCGAAAGAATCGAGGGATAGGGCAAGAGCTAGGGCAAGGCAAAGAACAATGTTGAAAAAAACTCATCAAGATCAAATCTTTGGTTTCAATTTCCAATATGGGAATTCAGATCAGCTTCAAGATCAGGACACCCATCACAAAGTTCTTGCCATTTCTGATCATGATCTCTCAGATTTTCCATCAATTCACAGATTTTTCTCAGGTAATAATAATGATGATACTCAATTGGAAAATCATGATTATTCATCTCTTTCTTGCCCTAATTCCATTTTCATGGCCTCCCCAATTCCCAAACCCTACTCTTTTTCTGATTCCACATTGCTCAATTGCCCTAATTTTAAATAA

Coding sequence (CDS)

ATGTTTGATTCTAGTAACACCACTGAAATGAATCACTTCCTTTTGGATCAAGATCATAACAGCTCATATGATCATCTACATTTCCCAGATCCTTTTCTCGACGACGACGACCTATTTTTCAGCCGGTTTTTGTCCCAACAACAGCTCGTCAGCGGTGGCGATTTTCCAAAGGAACAAGACGAGACGAAGCAAATTTCGGCAACAAAGAAGAAGAAATGTAGAAAAATTGGAAGCTCTACAAAGAGAACAGGGAAGAAGGACAGACATAGTAAGATCTGCACAGCACAGGGCCCAAGAGACCGTAGAATGAGATTGTCCCTTCAAATTGCAAGGAAATTCTTCAACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCAAAACCATTGACTGGCTTCTCTCTAACTCTACCTCGGCAATTACGGATCTCAAACACCGCTTAAACGACAACAACAACGGCCGTAGCTATAGCTACGGCAGTGTCTGCTCGGGGTCGAGCGAGGTTATTAATAATGGTGGTGGTGGAGCTACAACAAAAGAAACGACCACAAGGCAGTTACGTATTGTTGCGAAAGAATCGAGGGATAGGGCAAGAGCTAGGGCAAGGCAAAGAACAATGTTGAAAAAAACTCATCAAGATCAAATCTTTGGTTTCAATTTCCAATATGGGAATTCAGATCAGCTTCAAGATCAGGACACCCATCACAAAGTTCTTGCCATTTCTGATCATGATCTCTCAGATTTTCCATCAATTCACAGATTTTTCTCAGGTAATAATAATGATGATACTCAATTGGAAAATCATGATTATTCATCTCTTTCTTGCCCTAATTCCATTTTCATGGCCTCCCCAATTCCCAAACCCTACTCTTTTTCTGATTCCACATTGCTCAATTGCCCTAATTTTAAATAA

Protein sequence

MFDSSNTTEMNHFLLDQDHNSSYDHLHFPDPFLDDDDLFFSRFLSQQQLVSGGDFPKEQDETKQISATKKKKCRKIGSSTKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSYGSVCSGSSEVINNGGGGATTKETTTRQLRIVAKESRDRARARARQRTMLKKTHQDQIFGFNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSIHRFFSGNNNDDTQLENHDYSSLSCPNSIFMASPIPKPYSFSDSTLLNCPNFK
Homology
BLAST of Sed0000378 vs. NCBI nr
Match: XP_023550518.1 (transcription factor CYCLOIDEA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.6 bits (592), Expect = 4.4e-57
Identity = 156/281 (55.52%), Postives = 182/281 (64.77%), Query Frame = 0

Query: 15  LDQDHNSSYDHLHFPDPFLDDDDLFFSRFLS-----QQQLVSGGDFPKEQDETKQ----- 74
           +DQ+H  +  +LHFP PFLDD+DLF + FLS     QQQLVSGGD  KEQD+ ++     
Sbjct: 1   MDQEHEENSSYLHFPHPFLDDEDLFLTHFLSQQQQQQQQLVSGGDCWKEQDQEQEQEKAD 60

Query: 75  -----------------ISATKKKK------CRKIGSS-TKRTGKKDRHSKICTAQGPRD 134
                            +   KKKK       RK GSS TKRTGKKDRHSKICTAQGPRD
Sbjct: 61  DVGHDHKQNSEKKGRRSLEVKKKKKGSSSNSNRKNGSSTTKRTGKKDRHSKICTAQGPRD 120

Query: 135 RRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSYGS 194
           RRMRLSLQIARKFF+LQDMLGFDKASKTI+WLLS+S SAI  LK+  N+NNN    S+GS
Sbjct: 121 RRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALKN--NNNNNNSGVSHGS 180

Query: 195 VCSGSSEVINN---GGGGATTKETTTRQLRIVAKESRDRARARARQRTMLKKTHQDQIFG 254
            CSGSSEV++    GG   T K    RQL+ + +ESR RARARAR+RTMLKK+ Q     
Sbjct: 181 ACSGSSEVVSKQDAGGSIGTPKHKKGRQLQTIGRESRARARARARERTMLKKSPQP--IS 240

Query: 255 FNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSIHRFFSGN 259
            +  Y NSD+   +D   KV A SD    D  SIH FFSGN
Sbjct: 241 ISQHYLNSDETHLEDC-PKVFAFSD----DLSSIHTFFSGN 272

BLAST of Sed0000378 vs. NCBI nr
Match: XP_022928828.1 (transcription factor CYCLOIDEA-like [Cucurbita moschata])

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-56
Identity = 157/283 (55.48%), Postives = 179/283 (63.25%), Query Frame = 0

Query: 15  LDQDHNSSYDHLHFPDPFLDDDDLFFSRFLS------QQQLVSGGDFPKEQDETKQ---- 74
           +DQ H  +  +LHFP PFLDDDDLF + FLS      QQQLVSGGD  KEQDE ++    
Sbjct: 1   MDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDEEQEQDKA 60

Query: 75  ------------------ISATKKKK-------CRKIGSS-TKRTGKKDRHSKICTAQGP 134
                             +   KKKK        RK GSS TKRTGKKDRHSKICTAQGP
Sbjct: 61  DDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRHSKICTAQGP 120

Query: 135 RDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSY 194
           RDRRMRLSLQIARKFF+LQDMLGFDKASKTI+WLLS+S SAI      LN+NNN    S+
Sbjct: 121 RDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAI----KALNNNNNNSGVSH 180

Query: 195 GSVCSGSSEVINN---GGGGATTKETTTRQLRIVAKESRDRARARARQRTMLKKTHQDQI 254
           GS CSGSSEV++    GG   T K    RQL+ + +ESR RARARAR+RTMLKK+ Q   
Sbjct: 181 GSACSGSSEVVSKQDAGGSIGTPKHKKGRQLQTIGRESRARARARARERTMLKKSPQP-- 240

Query: 255 FGFNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSIHRFFSGN 259
              +  Y NSD+   +D   KV A SD    D  SIH FFSGN
Sbjct: 241 ICISQHYLNSDETHLEDC-PKVFAFSD----DLSSIHTFFSGN 272

BLAST of Sed0000378 vs. NCBI nr
Match: XP_022930117.1 (transcription factor TCP12-like [Cucurbita moschata])

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-55
Identity = 159/282 (56.38%), Postives = 177/282 (62.77%), Query Frame = 0

Query: 1   MFDSSNTTEMNHFLLD-QDHNSSYDHLHFPDPFLDDDDLFFSRFLSQQQLVSGGDFPKEQ 60
           MF S+N T+ NH  L  Q+ +    HLHFP PFLD DDLF +  LS Q    G D   EQ
Sbjct: 5   MFGSNNNTQTNHIALQHQEQHERNLHLHFPHPFLDQDDLFLTHILSSQHFFIGADCWGEQ 64

Query: 61  ------DETKQIS-------ATKKKKC---RKIGSSTKRTGKKDRHSKICTAQGPRDRRM 120
                 D+TKQ S         KKKKC   RK GSS K+TGKKDRHSKI TAQGPRDRRM
Sbjct: 65  EQEQHHDQTKQNSEKPRIEVVKKKKKCSGNRKNGSSRKKTGKKDRHSKIYTAQGPRDRRM 124

Query: 121 RLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSYGSVCS 180
           RLSLQIARKFF+LQDMLGFDKAS TI+WLLSNSTSAI DL+H L +N+  R   YGSVC 
Sbjct: 125 RLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSLANNSGHR---YGSVCC 184

Query: 181 GSSEVI------NNGGGG--------ATTKETTTRQLRIVAKESRDRARARARQRTMLKK 240
           GS+E +      NNGGGG        AT K   +R LR V +ESRDRARARARQRTMLKK
Sbjct: 185 GSTEAVSEMIRDNNGGGGAAKEAAFMATPKHKQSRALRRVGRESRDRARARARQRTMLKK 244

Query: 241 THQDQIFGFNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSI 252
             Q               LQD  +   V+AISD DL DF SI
Sbjct: 245 IKQP-----------ISNLQDVSS---VVAISD-DLWDFASI 268

BLAST of Sed0000378 vs. NCBI nr
Match: KAG7032481.1 (Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225.7 bits (574), Expect = 5.3e-55
Identity = 160/291 (54.98%), Postives = 178/291 (61.17%), Query Frame = 0

Query: 1   MFDSSNTTEMNHFLLDQDHNSSYDH---LHFPDPFLDDDDLFFSRFLSQQQLVSGGDFPK 60
           MF S+N T+ NH  L   H   +DH   LHFP PF+D DDLF +  LS QQ   G D   
Sbjct: 1   MFGSNNNTQTNHIAL--QHQEQHDHNLYLHFPHPFVDQDDLFLTHILSSQQFFIGADCWG 60

Query: 61  EQ----------DETKQ--------ISATKKKKC---RKIGSSTKRTGKKDRHSKICTAQ 120
           EQ          D TKQ        +   KKKKC   RK GSS K+TGKKDRHSKI TAQ
Sbjct: 61  EQEQEQEQEQHHDRTKQNSEKPRIEVVKKKKKKCSGNRKNGSSRKKTGKKDRHSKIYTAQ 120

Query: 121 GPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSY 180
           GPRDRRMRLSLQIARKFF+LQDMLGFDKAS TI+WLLSNSTSAI DL+H L +N+  R  
Sbjct: 121 GPRDRRMRLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSLANNSGHR-- 180

Query: 181 SYGSVCSGSSEVI------NNGGGG--------ATTKETTTRQLRIVAKESRDRARARAR 240
            YGSVC GS+E +      NNGGGG        AT K   +R LR V +ESRDRARARAR
Sbjct: 181 -YGSVCCGSTEAVSEMIRDNNGGGGSAKEAAFMATPKHKQSRALRRVGRESRDRARARAR 240

Query: 241 QRTMLKKTHQDQIFGFNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSIHR 254
           QRTMLKK  Q               LQD  +   V+AISD DL DF SI R
Sbjct: 241 QRTMLKKIKQP-----------ISNLQDLSS---VVAISD-DLWDFASIQR 271

BLAST of Sed0000378 vs. NCBI nr
Match: XP_022974210.1 (transcription factor CYCLOIDEA-like [Cucurbita maxima])

HSP 1 Score: 225.7 bits (574), Expect = 5.3e-55
Identity = 158/283 (55.83%), Postives = 179/283 (63.25%), Query Frame = 0

Query: 1   MFDSSNTTEMNHFLLD-QDHNSSYDHLHFPDPFLDDDDLFFSRFLSQQQLVSGGDFPKEQ 60
           MF S+N T+ NH  L  Q+ +    +LHFP PFLD DDLF +  LS QQ   G D   EQ
Sbjct: 6   MFGSNNNTQTNHIALQHQEQHEENLYLHFPHPFLDHDDLFLTHILSSQQFFIGADCWGEQ 65

Query: 61  ------DETKQ--------ISATKKKKC---RKIGSSTKRTGKKDRHSKICTAQGPRDRR 120
                 D+TKQ        +   KKKKC   RK GSS K+TGKKDRHSKI TAQGPRDRR
Sbjct: 66  EQEHEHDQTKQNSEKPRIEVVKKKKKKCSGNRKNGSSRKKTGKKDRHSKIYTAQGPRDRR 125

Query: 121 MRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSYGSVC 180
           +RLSLQIARKFF+LQDMLGFDKAS TI+WLLSNSTSAI DL+H L +N+  R   YGSVC
Sbjct: 126 IRLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSLANNSGHR---YGSVC 185

Query: 181 SGSSEVI------NNGGGG--------ATTKETTTRQLRIVAKESRDRARARARQRTMLK 240
            GS+E +      NNGGGG        AT K   +R LR V +ESRDRARARARQRTMLK
Sbjct: 186 CGSTEAVSEMIRDNNGGGGAAKEAAFMATPKHKQSRALRRVGRESRDRARARARQRTMLK 245

Query: 241 KTHQDQIFGFNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSI 252
           KT Q               LQD  +   V+AISD DL DF SI
Sbjct: 246 KTKQP-----------ISNLQDVSS---VVAISD-DLWDFASI 270

BLAST of Sed0000378 vs. ExPASy Swiss-Prot
Match: A0AQW4 (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.1e-26
Identity = 90/198 (45.45%), Postives = 114/198 (57.58%), Query Frame = 0

Query: 19  HNSSYDHLHFPDPFLD--DDDLFFSRFLSQQQLVSGGDFPKEQDETKQISATKKKKCRKI 78
           H+ S     F   FL+  D+    ++FL QQQ V+           K++   KK +    
Sbjct: 38  HHYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAANVVESPWKFCKKLELKKKNEKCVD 97

Query: 79  GSST-----KRTGKK-DRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTID 138
           GS++     +RT KK DRHSKICTAQGPRDRRMRLSLQIARKFF+LQDMLGFDKASKTI+
Sbjct: 98  GSTSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIE 157

Query: 139 WLLSNSTSAITDLKHRLNDNNNGRSYSYGSVCSGSSEVINNGGGGATTKETTTRQLRIVA 198
           WL S S ++I  LK R+  +  G    +  V     E         + + T T +     
Sbjct: 158 WLFSKSKTSIKQLKERVAASEGGGKDEHLQV--DEKEKDETLKLRVSKRRTKTMESSFKT 217

Query: 199 KESRDRARARARQRTMLK 209
           KESR+RAR RAR+RTM K
Sbjct: 218 KESRERARKRARERTMAK 233

BLAST of Sed0000378 vs. ExPASy Swiss-Prot
Match: Q9SBV6 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 68/136 (50.00%), Postives = 87/136 (63.97%), Query Frame = 0

Query: 80  TKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSA 139
           TK+  KKDRHSKI T+QGPRDRR+RLS+ IARKFF+LQ+MLGFDK SKT+DWLL+ S +A
Sbjct: 74  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 133

Query: 140 ITDLKHRLNDNNNGRS--YSYGSVCSGSSEVINNGGGGATTK-----ETTTRQLRIVAKE 199
           I +L    +  +N  S       V S  SE + +   G + K     +      +  AKE
Sbjct: 134 IKELVQSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKE 193

Query: 200 SRDRARARARQRTMLK 209
           SR +ARARAR+RT  K
Sbjct: 194 SRAKARARARERTKEK 209

BLAST of Sed0000378 vs. ExPASy Swiss-Prot
Match: O49250 (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 68/136 (50.00%), Postives = 87/136 (63.97%), Query Frame = 0

Query: 80  TKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSA 139
           TK+  KKDRHSKI T+QGPRDRR+RLS+ IARKFF+LQ+MLGFDK SKT+DWLL+ S +A
Sbjct: 82  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 141

Query: 140 ITDLKHRLNDNNNGRS--YSYGSVCSGSSEVINNGGGGATTK-----ETTTRQLRIVAKE 199
           I +L    +  +N  S       V S  SE + +   G + K     +      +  AKE
Sbjct: 142 IKELVQSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKE 201

Query: 200 SRDRARARARQRTMLK 209
           SR +ARARAR+RT  K
Sbjct: 202 SRAKARARARERTKEK 217

BLAST of Sed0000378 vs. ExPASy Swiss-Prot
Match: Q9SBV9 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 67/136 (49.26%), Postives = 87/136 (63.97%), Query Frame = 0

Query: 80  TKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSA 139
           TK+  KKDRHSKI T+QGPRDRR+RLS+ IARKFF+LQ+MLGFDK SKT+DWLL+ S +A
Sbjct: 74  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 133

Query: 140 ITDLKHRLNDNNNGRS--YSYGSVCSGSSEVINNGGGGATTK-----ETTTRQLRIVAKE 199
           + +L    +  +N  S       V S  SE + +   G + K     +      +  AKE
Sbjct: 134 VKELVQSKSTKSNSSSPCDDCEEVVSVESENVTDHSKGKSLKANNKCKEAMDSHQAAAKE 193

Query: 200 SRDRARARARQRTMLK 209
           SR +ARARAR+RT  K
Sbjct: 194 SRAKARARARERTKEK 209

BLAST of Sed0000378 vs. ExPASy Swiss-Prot
Match: Q9SNW8 (Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-19
Identity = 69/136 (50.74%), Postives = 84/136 (61.76%), Query Frame = 0

Query: 81  KRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAI 140
           K T KKDRHSKI   QGPRDRR+RLS+ IARKFF+LQ+MLGFDK SKT+DWLL+ S  AI
Sbjct: 83  KHTPKKDRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAI 142

Query: 141 TDL---KHRLNDNNNGRSYSYGSVCSGSSEVINNGGGGA-----TTKETTTRQLRIVAKE 200
            +L   K   ++ +N  S     V S     I +  G A     + K    R    +AKE
Sbjct: 143 KELVQSKSSKSNISNSPSECDQEVLSADLPYIGSSKGKAAVGLNSNKCKGGRDAVDLAKE 202

Query: 201 SRDRARARARQRTMLK 209
           SR +ARARAR+RT  K
Sbjct: 203 SRAKARARARERTKEK 218

BLAST of Sed0000378 vs. ExPASy TrEMBL
Match: A0A6J1EQ72 (transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC111435624 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 157/283 (55.48%), Postives = 179/283 (63.25%), Query Frame = 0

Query: 15  LDQDHNSSYDHLHFPDPFLDDDDLFFSRFLS------QQQLVSGGDFPKEQDETKQ---- 74
           +DQ H  +  +LHFP PFLDDDDLF + FLS      QQQLVSGGD  KEQDE ++    
Sbjct: 1   MDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDEEQEQDKA 60

Query: 75  ------------------ISATKKKK-------CRKIGSS-TKRTGKKDRHSKICTAQGP 134
                             +   KKKK        RK GSS TKRTGKKDRHSKICTAQGP
Sbjct: 61  DDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRHSKICTAQGP 120

Query: 135 RDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSY 194
           RDRRMRLSLQIARKFF+LQDMLGFDKASKTI+WLLS+S SAI      LN+NNN    S+
Sbjct: 121 RDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAI----KALNNNNNNSGVSH 180

Query: 195 GSVCSGSSEVINN---GGGGATTKETTTRQLRIVAKESRDRARARARQRTMLKKTHQDQI 254
           GS CSGSSEV++    GG   T K    RQL+ + +ESR RARARAR+RTMLKK+ Q   
Sbjct: 181 GSACSGSSEVVSKQDAGGSIGTPKHKKGRQLQTIGRESRARARARARERTMLKKSPQP-- 240

Query: 255 FGFNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSIHRFFSGN 259
              +  Y NSD+   +D   KV A SD    D  SIH FFSGN
Sbjct: 241 ICISQHYLNSDETHLEDC-PKVFAFSD----DLSSIHTFFSGN 272

BLAST of Sed0000378 vs. ExPASy TrEMBL
Match: A0A6J1EPH0 (transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111436600 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 159/282 (56.38%), Postives = 177/282 (62.77%), Query Frame = 0

Query: 1   MFDSSNTTEMNHFLLD-QDHNSSYDHLHFPDPFLDDDDLFFSRFLSQQQLVSGGDFPKEQ 60
           MF S+N T+ NH  L  Q+ +    HLHFP PFLD DDLF +  LS Q    G D   EQ
Sbjct: 5   MFGSNNNTQTNHIALQHQEQHERNLHLHFPHPFLDQDDLFLTHILSSQHFFIGADCWGEQ 64

Query: 61  ------DETKQIS-------ATKKKKC---RKIGSSTKRTGKKDRHSKICTAQGPRDRRM 120
                 D+TKQ S         KKKKC   RK GSS K+TGKKDRHSKI TAQGPRDRRM
Sbjct: 65  EQEQHHDQTKQNSEKPRIEVVKKKKKCSGNRKNGSSRKKTGKKDRHSKIYTAQGPRDRRM 124

Query: 121 RLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSYGSVCS 180
           RLSLQIARKFF+LQDMLGFDKAS TI+WLLSNSTSAI DL+H L +N+  R   YGSVC 
Sbjct: 125 RLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSLANNSGHR---YGSVCC 184

Query: 181 GSSEVI------NNGGGG--------ATTKETTTRQLRIVAKESRDRARARARQRTMLKK 240
           GS+E +      NNGGGG        AT K   +R LR V +ESRDRARARARQRTMLKK
Sbjct: 185 GSTEAVSEMIRDNNGGGGAAKEAAFMATPKHKQSRALRRVGRESRDRARARARQRTMLKK 244

Query: 241 THQDQIFGFNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSI 252
             Q               LQD  +   V+AISD DL DF SI
Sbjct: 245 IKQP-----------ISNLQDVSS---VVAISD-DLWDFASI 268

BLAST of Sed0000378 vs. ExPASy TrEMBL
Match: A0A6J1IDD5 (transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111472832 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.6e-55
Identity = 158/283 (55.83%), Postives = 179/283 (63.25%), Query Frame = 0

Query: 1   MFDSSNTTEMNHFLLD-QDHNSSYDHLHFPDPFLDDDDLFFSRFLSQQQLVSGGDFPKEQ 60
           MF S+N T+ NH  L  Q+ +    +LHFP PFLD DDLF +  LS QQ   G D   EQ
Sbjct: 6   MFGSNNNTQTNHIALQHQEQHEENLYLHFPHPFLDHDDLFLTHILSSQQFFIGADCWGEQ 65

Query: 61  ------DETKQ--------ISATKKKKC---RKIGSSTKRTGKKDRHSKICTAQGPRDRR 120
                 D+TKQ        +   KKKKC   RK GSS K+TGKKDRHSKI TAQGPRDRR
Sbjct: 66  EQEHEHDQTKQNSEKPRIEVVKKKKKKCSGNRKNGSSRKKTGKKDRHSKIYTAQGPRDRR 125

Query: 121 MRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSYGSVC 180
           +RLSLQIARKFF+LQDMLGFDKAS TI+WLLSNSTSAI DL+H L +N+  R   YGSVC
Sbjct: 126 IRLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHSLANNSGHR---YGSVC 185

Query: 181 SGSSEVI------NNGGGG--------ATTKETTTRQLRIVAKESRDRARARARQRTMLK 240
            GS+E +      NNGGGG        AT K   +R LR V +ESRDRARARARQRTMLK
Sbjct: 186 CGSTEAVSEMIRDNNGGGGAAKEAAFMATPKHKQSRALRRVGRESRDRARARARQRTMLK 245

Query: 241 KTHQDQIFGFNFQYGNSDQLQDQDTHHKVLAISDHDLSDFPSI 252
           KT Q               LQD  +   V+AISD DL DF SI
Sbjct: 246 KTKQP-----------ISNLQDVSS---VVAISD-DLWDFASI 270

BLAST of Sed0000378 vs. ExPASy TrEMBL
Match: A0A6J1HX83 (transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111468867 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.4e-54
Identity = 155/273 (56.78%), Postives = 178/273 (65.20%), Query Frame = 0

Query: 15  LDQDHNSSYDHLHFPDPFLDDDDLFFSRFLS-QQQLVSGGDFPKEQDET----------- 74
           +DQ+H  +  +LHFP PFL DDDLF +  LS QQQLVSGGD  K+Q++            
Sbjct: 1   MDQEHEENSSYLHFPHPFL-DDDLFLTHLLSQQQQLVSGGDCWKDQEQEQEKEDDVGHDH 60

Query: 75  KQIS----------ATKKKKC---RKIGSS-TKRTGKKDRHSKICTAQGPRDRRMRLSLQ 134
           KQ S            KKKKC   RK GSS TKRT KKDRHSKICTAQGPRDRRMRLSLQ
Sbjct: 61  KQNSEKKGRRSLEVKKKKKKCNSNRKNGSSTTKRTVKKDRHSKICTAQGPRDRRMRLSLQ 120

Query: 135 IARKFFNLQDMLGFDKASKTIDWLLSNSTSAITDLKHRLNDNNNGRSYSYGSVCSGSSEV 194
           IARKFF+LQDMLGFDKASKTI+WLLS+S SAI  LK    +NNN    S+GS CSGSSEV
Sbjct: 121 IARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALK----NNNNNSGVSHGSACSGSSEV 180

Query: 195 INN---GGGGATTKETTTRQLRIVAKESRDRARARARQRTMLKKTHQDQIFGFNFQYGNS 254
           ++    GG   T K    RQL+ + +ESR RARARAR+RTMLKK+ Q      +  Y NS
Sbjct: 181 VSKQDAGGSIGTPKHKKGRQLQTIGRESRARARARARERTMLKKSPQP--ISISQHYLNS 240

Query: 255 DQLQDQDTHHKVLAISDHDLSDFPSIHRFFSGN 259
           D+   +D   KV A SD    D  SIH FFSGN
Sbjct: 241 DETHLEDC-PKVFAFSD----DLSSIHTFFSGN 261

BLAST of Sed0000378 vs. ExPASy TrEMBL
Match: A0A0A0KRR2 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G577450 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.8e-47
Identity = 149/301 (49.50%), Postives = 179/301 (59.47%), Query Frame = 0

Query: 23  YDHLHFPDPFLDDDDLFFSRFLSQQQLVSGGDFPKEQDETKQISATKKKKC-----RKIG 82
           +D  +FP PFLDDDDLF S FLSQQQ        ++ DET +    KKK C     RK G
Sbjct: 22  HDFHYFPHPFLDDDDLFLSHFLSQQQQFF-EQRDQQLDETTKKMKKKKKLCGSSSSRKNG 81

Query: 83  S-STKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNS 142
           S STKR GKKDRHSKI TAQGPRDRRMRLSLQIARKFF+LQDMLGFDKASKTI+WLL NS
Sbjct: 82  SNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNS 141

Query: 143 TSAITDLK--HRLNDNNNGRSYSYGSVCSGSSEVINNGGG--------------GATTKE 202
            SAI DLK  +    +N+G+S    S  + ++ V N                  G    +
Sbjct: 142 NSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDK 201

Query: 203 TTTRQLRIVAKESRDRARARARQRTMLKKTHQDQIFGFNFQYGNSDQLQDQDTHHKVLAI 262
             +R LR VA+E+RDRARARARQRT+LK T                 L +      +   
Sbjct: 202 IKSRTLRTVAREARDRARARARQRTLLKNT----------------LLPNPPITSSISQH 261

Query: 263 SDHDLSDFPSIHRFFSGNNNDDTQLENHDYSSLSCPN-SIFMASPIPKPYSFSDSTLLNC 301
            DH LS   +I    S NNN++T L+   Y + SCP+ SIF+ SP+P PYSF+DSTLL  
Sbjct: 262 FDH-LSGNNNISS--SSNNNNNTYLDY--YPTFSCPSTSIFLPSPLPLPYSFTDSTLLKL 300

BLAST of Sed0000378 vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 120.2 bits (300), Expect = 2.9e-27
Identity = 90/198 (45.45%), Postives = 114/198 (57.58%), Query Frame = 0

Query: 19  HNSSYDHLHFPDPFLD--DDDLFFSRFLSQQQLVSGGDFPKEQDETKQISATKKKKCRKI 78
           H+ S     F   FL+  D+    ++FL QQQ V+           K++   KK +    
Sbjct: 38  HHYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAANVVESPWKFCKKLELKKKNEKCVD 97

Query: 79  GSST-----KRTGKK-DRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTID 138
           GS++     +RT KK DRHSKICTAQGPRDRRMRLSLQIARKFF+LQDMLGFDKASKTI+
Sbjct: 98  GSTSQEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIE 157

Query: 139 WLLSNSTSAITDLKHRLNDNNNGRSYSYGSVCSGSSEVINNGGGGATTKETTTRQLRIVA 198
           WL S S ++I  LK R+  +  G    +  V     E         + + T T +     
Sbjct: 158 WLFSKSKTSIKQLKERVAASEGGGKDEHLQV--DEKEKDETLKLRVSKRRTKTMESSFKT 217

Query: 199 KESRDRARARARQRTMLK 209
           KESR+RAR RAR+RTM K
Sbjct: 218 KESRERARKRARERTMAK 233

BLAST of Sed0000378 vs. TAIR 10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-19
Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 0

Query: 75  KIGSSTKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLS 134
           ++    K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FF+LQDMLGFDKASKT+DWLL 
Sbjct: 77  EVSKEIKKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLK 136

Query: 135 NSTSAITDLKHRLNDNNNGRSY 157
            S  AI ++    N NN+   +
Sbjct: 137 KSRKAIKEVVQAKNLNNDDEDF 158

BLAST of Sed0000378 vs. TAIR 10
Match: AT1G67260.2 (TCP family transcription factor )

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-19
Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 0

Query: 75  KIGSSTKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLS 134
           ++    K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FF+LQDMLGFDKASKT+DWLL 
Sbjct: 77  EVSKEIKKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLK 136

Query: 135 NSTSAITDLKHRLNDNNNGRSY 157
            S  AI ++    N NN+   +
Sbjct: 137 KSRKAIKEVVQAKNLNNDDEDF 158

BLAST of Sed0000378 vs. TAIR 10
Match: AT3G18550.2 (TCP family transcription factor )

HSP 1 Score: 82.8 bits (203), Expect = 5.2e-16
Identity = 68/178 (38.20%), Postives = 97/178 (54.49%), Query Frame = 0

Query: 60  DETKQISATKKKKCRKIGSSTKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDM 119
           +++++IS ++  K +K     K+  + DRHSKI TA+G RDRRMRLSL +A++ F LQDM
Sbjct: 127 EDSQRISTSQDPKMKK----AKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDM 186

Query: 120 LGFDKASKTIDWLLSNSTSAI----TDLKHR----LNDNNNGRSYSYGS-VCS-GSSEVI 179
           LGFDKASKT++WLL+ +   I    T L H       D ++ RS    S +C   S   +
Sbjct: 187 LGFDKASKTVEWLLTQAKPEIIKIATTLSHHGCFSSGDESHIRSMDTSSDLCELASMWTV 246

Query: 180 NNGGGGATTKET-------------------TTRQLRIVAKESRDRARARARQRTMLK 209
           ++ G    T ET                    T  L+ ++KE R +AR RA+ RTM K
Sbjct: 247 DDRGSNTNTTETRGNKVDGRSMRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEK 300

BLAST of Sed0000378 vs. TAIR 10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 )

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-15
Identity = 50/139 (35.97%), Postives = 84/139 (60.43%), Query Frame = 0

Query: 80  TKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFNLQDMLGFDKASKTIDWLLSNSTSA 139
           ++ +G KDRHSK+ T++GPRDRR+RLS+  A +F++LQD LG+D+ SK ++WL+  +  +
Sbjct: 37  SRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDS 96

Query: 140 ITDL-----KHRLNDNNNGRSYSYGSVCSGSSEVINNGGGGATTKETTTRQLRIVAKESR 199
           I++L      H   D+ N ++ +  +V + S           T+K ++   L +   E R
Sbjct: 97  ISELPSLNNTHFPTDDENHQNQTLTTVAANSLSKSACSSNSDTSKNSS--GLSLSRSELR 156

Query: 200 DRARARARQRTMLKKTHQD 214
           D+AR RAR+RT  +   +D
Sbjct: 157 DKARERARERTAKETKERD 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023550518.14.4e-5755.52transcription factor CYCLOIDEA-like [Cucurbita pepo subsp. pepo][more]
XP_022928828.12.8e-5655.48transcription factor CYCLOIDEA-like [Cucurbita moschata][more]
XP_022930117.14.1e-5556.38transcription factor TCP12-like [Cucurbita moschata][more]
KAG7032481.15.3e-5554.98Transcription factor TCP12, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022974210.15.3e-5555.83transcription factor CYCLOIDEA-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0AQW44.1e-2645.45Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1[more]
Q9SBV61.2e-2050.00Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=... [more]
O492501.2e-2050.00Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1[more]
Q9SBV91.5e-2049.26Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 G... [more]
Q9SNW82.2e-1950.74Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1EQ721.4e-5655.48transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC11143562... [more]
A0A6J1EPH02.0e-5556.38transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111436600 PE... [more]
A0A6J1IDD52.6e-5555.83transcription factor CYCLOIDEA-like OS=Cucurbita maxima OX=3661 GN=LOC111472832 ... [more]
A0A6J1HX836.4e-5456.78transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111468867 PE=4... [more]
A0A0A0KRR25.8e-4749.50TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G577450 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT1G68800.12.9e-2745.45TCP domain protein 12 [more]
AT1G67260.18.6e-1958.54TCP family transcription factor [more]
AT1G67260.28.6e-1958.54TCP family transcription factor [more]
AT3G18550.25.2e-1638.20TCP family transcription factor [more]
AT4G18390.12.6e-1535.97TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017887Transcription factor TCP subgroupPFAMPF03634TCPcoord: 83..210
e-value: 8.1E-37
score: 127.2
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 85..143
score: 35.030548
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..91
NoneNo IPR availablePANTHERPTHR31072:SF118TRANSCRIPTION FACTOR TCP12coord: 30..246
IPR005333Transcription factor, TCPPANTHERPTHR31072TRANSCRIPTION FACTOR TCP4-RELATEDcoord: 30..246
IPR017888CYC/TB1, R domainPROSITEPS51370Rcoord: 191..208
score: 9.772915

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0000378.1Sed0000378.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003700 DNA-binding transcription factor activity