Sed0000366 (gene) Chayote v1

Overview


Name	Sed0000366
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pol protein
Location	LG07: 32852978 .. 32854026 (+)
RNA-Seq Expression	Sed0000366
Synteny	Sed0000366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTTATTTCTGGCTTGCCGAGGACTCCGAGGAAGTTCTCTCAGATTTGGGTGATAGTCGATCGATTGACTAAGAGCGCACACTTCATTCCCGGTAGAGACACTTATACCGTGGAACAGTGGGCGCAGTTGTTTTTGGAGCAGATCATTCGCTATCACGGTGTGCCTGTGAGGATCGTATCTGACCGTGATTCAAGGTTCACTTCTCGTTTCTAGAGAGCGCTCCAGAAGGGTTTAGGCACTGAGTGCAGCTTCAGCACAACTTTTCACCCTCAGACCGATGGACAGACTGAGAGGGTGAACCAGATTCTCGAAGATATGTTGAGGGCTTGTGTGTTGGATTTCCCGGGCAGTTGGGACCAGTATCTGTATCTGATGGAGTTTGCATATAACAACGATTATCGATCGGCGATCGAGATGGCTCCATTCGAGGCTTTGTATGGCAAGCGTTGCCGATCTCCCGTGTTCGGGAAGAGGTTGGTGATAGGCGAGTTTTGGGTCCCGAGTTATCTGCGCTTGACCAATGGTGTCGTCGCGTAAGATTAGAGCCCGTATGTTGACAAATTTCGGAGCGCATGCGAAAGAGTTATGCCGATGTTCGGCGTCGGGATTTGGAATTTGAGGTTGGTCAACATGTTTTCTTGAAGGTCGCACCGATGCGAGGTGTTTTGAGGTTTGGCAAGCGTGGAAAGCTGAGTCCCCATTTTGTTGGCCCGTTTGAGATTCTGGAGAGGATCGGCAAGGTTGCTTATAGATTAGCCTTGCCTCCGACATTGTCGGCAGTGCACAGTGTATTTCATGTATCGATGTTGAGGCAGTACGTGCCGGACCCATCGCACATTGTAGATTTTGAGCCCTTGCAGCTGAATGAGGATTTGAGCTTTGAGGAAAAGCCAGTGGGGATTCTTGCTTTTGAGACAAAGGCACTGCGAAATCGTGAAATCCGGCTGGTAAAGGTTCAGTGGAGGAGTCAGAGTTTAGAGGAAGCCACTTGGGAGCGGGAGGATGAGATGAGATTGCAGTATCCCGAGCTGTTTCAATCTTAA

mRNA sequence

ATGGACTTTATTTCTGGCTTGCCGAGGACTCCGAGGAAGTTCTCTCAGATTTGGGTGATAGTCGATCGATTGACTAAGAGCGCACACTTCATTCCCGGTAGAGACACTTATACCGTGGAACAGTGGGCGCAGTTGTTTTTGGAGCAGATCATTCGCTATCACGGTGTGCCTAGAGCGCTCCAGAAGGGTTTAGGCACTGAGTGCAGCTTCAGCACAACTTTTCACCCTCAGACCGATGGACAGACTGAGAGGGTGAACCAGATTCTCGAAGATATGTTGAGGGCTTGTGTGTTGGATTTCCCGGGCAGTTGGGACCAGTATCTGTATCTGATGGAGTTTGCATATAACAACGATTATCGATCGGCGATCGAGATGGCTCCATTCGAGGCTTTGTATGGCAAGCGTTGCCGATCTCCCGTGTTCGGGAAGAGGTTGGTGATAGGCGAGTTTTGGGTCCCGAGTTATCTGCGCTTGACCAATGGTGTCGTCGCTTATGCCGATGTTCGGCGTCGGGATTTGGAATTTGAGGTTGGTCAACATGTTTTCTTGAAGGTCGCACCGATGCGAGGTGTTTTGAGGTTTGGCAAGCGTGGAAAGCTGAGTCCCCATTTTGTTGGCCCGTTTGAGATTCTGGAGAGGATCGGCAAGGTTGCTTATAGATTAGCCTTGCCTCCGACATTGTCGGCAGTGCACAGTGTATTTCATGTATCGATGTTGAGGCAGTACGTGCCGGACCCATCGCACATTGTAGATTTTGAGCCCTTGCAGCTGAATGAGGATTTGAGCTTTGAGGAAAAGCCAGTGGGGATTCTTGCTTTTGAGACAAAGGCACTGCGAAATCGTGAAATCCGGCTGGTAAAGGTTCAGTGGAGGAGTCAGAGTTTAGAGGAAGCCACTTGGGAGCGGGAGGATGAGATGAGATTGCAGTATCCCGAGCTGTTTCAATCTTAA

Coding sequence (CDS)

ATGGACTTTATTTCTGGCTTGCCGAGGACTCCGAGGAAGTTCTCTCAGATTTGGGTGATAGTCGATCGATTGACTAAGAGCGCACACTTCATTCCCGGTAGAGACACTTATACCGTGGAACAGTGGGCGCAGTTGTTTTTGGAGCAGATCATTCGCTATCACGGTGTGCCTAGAGCGCTCCAGAAGGGTTTAGGCACTGAGTGCAGCTTCAGCACAACTTTTCACCCTCAGACCGATGGACAGACTGAGAGGGTGAACCAGATTCTCGAAGATATGTTGAGGGCTTGTGTGTTGGATTTCCCGGGCAGTTGGGACCAGTATCTGTATCTGATGGAGTTTGCATATAACAACGATTATCGATCGGCGATCGAGATGGCTCCATTCGAGGCTTTGTATGGCAAGCGTTGCCGATCTCCCGTGTTCGGGAAGAGGTTGGTGATAGGCGAGTTTTGGGTCCCGAGTTATCTGCGCTTGACCAATGGTGTCGTCGCTTATGCCGATGTTCGGCGTCGGGATTTGGAATTTGAGGTTGGTCAACATGTTTTCTTGAAGGTCGCACCGATGCGAGGTGTTTTGAGGTTTGGCAAGCGTGGAAAGCTGAGTCCCCATTTTGTTGGCCCGTTTGAGATTCTGGAGAGGATCGGCAAGGTTGCTTATAGATTAGCCTTGCCTCCGACATTGTCGGCAGTGCACAGTGTATTTCATGTATCGATGTTGAGGCAGTACGTGCCGGACCCATCGCACATTGTAGATTTTGAGCCCTTGCAGCTGAATGAGGATTTGAGCTTTGAGGAAAAGCCAGTGGGGATTCTTGCTTTTGAGACAAAGGCACTGCGAAATCGTGAAATCCGGCTGGTAAAGGTTCAGTGGAGGAGTCAGAGTTTAGAGGAAGCCACTTGGGAGCGGGAGGATGAGATGAGATTGCAGTATCCCGAGCTGTTTCAATCTTAA

Protein sequence

MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSWDQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVVAYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQS

Homology

[Close]

BLAST of Sed0000366 vs. NCBI nr
Match: KAA0051522.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 455.3 bits (1170), Expect = 4.3e-124
Identity = 217/346 (62.72%), Postives = 262/346 (75.72%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
            MDFI+GLPRT R F+ IWV+V+RLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 1154 MDFITGLPRTLRGFTVIWVVVNRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 1213

Query: 61   -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                         R LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 1214 VSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 1273

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
            D +L+LMEFAYNN Y++ I M PFEALYGK CRSPV+   +       P  ++ TN  + 
Sbjct: 1274 DSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVYWGEVGEQRLMGPELVQSTNEAIQ 1333

Query: 181  --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                          +YADVRR+DLEFEVG  VFLKVAPMRGVLRF +RGKLSPHFVGPFE
Sbjct: 1334 KIRSCMHTAQNRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPHFVGPFE 1393

Query: 241  ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
            +LERIG VAYRLALPP+LS VH VFHVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PVG
Sbjct: 1394 VLERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVG 1453

Query: 301  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
            +LA E K LRNREI  VK+ WR+  +EEATWERED+MR +YPELF+
Sbjct: 1454 VLAREVKVLRNREIPFVKILWRNHRVEEATWEREDDMRSRYPELFE 1499

[Close]

BLAST of Sed0000366 vs. NCBI nr
Match: KAA0060848.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 448.4 bits (1152), Expect = 5.3e-122
Identity = 217/346 (62.72%), Postives = 259/346 (74.86%), Query Frame = 0


Query: 1   MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
           MDFI GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 206 MDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 265

Query: 61  -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                        + LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 266 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 325

Query: 121 DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
           D +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  + 
Sbjct: 326 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 385

Query: 181 --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                         +YADVRR+DLEFEVG  VFLKVAPMRGVLRF KRGKLSP FVGPFE
Sbjct: 386 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFE 445

Query: 241 ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
           ILERIG VAYRLALPP+L+  H VFHVSMLR+YVPDPSH+VD+EPL+++E++S+ E+PV 
Sbjct: 446 ILERIGPVAYRLALPPSLTTAHDVFHVSMLRKYVPDPSHVVDYEPLEIDENMSYTEQPVE 505

Query: 301 ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
           ILA E K LRN+EI LVKV WR+  +EEATWERED+MR +YPELF+
Sbjct: 506 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 551

[Close]

BLAST of Sed0000366 vs. NCBI nr
Match: KAA0053234.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 447.6 bits (1150), Expect = 9.0e-122
Identity = 216/346 (62.43%), Postives = 261/346 (75.43%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
            MDFI+GLPRT + F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 1116 MDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVPVSI 1175

Query: 61   -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                         + LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 1176 VSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 1235

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
            D +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  + 
Sbjct: 1236 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 1295

Query: 181  --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                          +YADVRR+DLEFEVG  VFLKVAPMRGVLRF +RGKLS HFVGPFE
Sbjct: 1296 KIKSRMRTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSSHFVGPFE 1355

Query: 241  ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
            ILERIG VAYRLALPP+LS VH VFHVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV 
Sbjct: 1356 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVE 1415

Query: 301  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
            +LA E K LR++EI LVKV WR+  +EEATWERED+MR +YPELF+
Sbjct: 1416 VLAREVKTLRSKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 1461

[Close]

BLAST of Sed0000366 vs. NCBI nr
Match: KAA0043401.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 447.6 bits (1150), Expect = 9.0e-122
Identity = 214/346 (61.85%), Postives = 262/346 (75.72%), Query Frame = 0


Query: 1   MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
           MDFI+GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 44  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 103

Query: 61  -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                        + LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 104 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 163

Query: 121 DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
           D +L+LMEFAYNN Y++ I MAPFEALYG+ CRSPV    +       P  ++ TN  + 
Sbjct: 164 DSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQ 223

Query: 181 --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                         +YADVRR+DLEFE+G  VFLKVAPM+GVLRF +RGKLSP FVGPFE
Sbjct: 224 KIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 283

Query: 241 ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
           ILERIG VAYRLALPP+LSAVH VFH+SMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV 
Sbjct: 284 ILERIGPVAYRLALPPSLSAVHDVFHISMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 343

Query: 301 ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
           +LA E K LRN++I LVKV WR+  +EEATWERED+MR +YPELF+
Sbjct: 344 VLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 389

[Close]

BLAST of Sed0000366 vs. NCBI nr
Match: KAA0041424.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 446.8 bits (1148), Expect = 1.5e-121
Identity = 216/346 (62.43%), Postives = 261/346 (75.43%), Query Frame = 0


Query: 1   MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
           MDFI+GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                        + LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
           D +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  V 
Sbjct: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAVQ 180

Query: 181 --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                         +YADVRR+DLEFEVG  VFLKVAPM+GVLRF +RGKLSP FVGPFE
Sbjct: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 240

Query: 241 ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
           ILER+G VAYRLALPP+LSAVH VFHVSMLR+YVPDPSH+VD EPL+++E+LS+ E+PV 
Sbjct: 241 ILERVGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDCEPLEIDENLSYVEQPVE 300

Query: 301 ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
           +LA E K LRN++I LVKV WR+  +EEATWERED+MR +YP+LF+
Sbjct: 301 VLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPDLFE 346

[Close]

BLAST of Sed0000366 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.9e-28
Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL 60
            MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ----------------QKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                                     FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WV 180
              ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTV 1168

Query: 181  PSYLRLTN-GVVAYADVRRRDL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEI 240
              +L   N  +  Y D++ +++ EF+ G  V +K     G L   K  KL+P F GPF +
Sbjct: 1169 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGPFYV 1228

Query: 241  LERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY 243
            L++ G   Y L LP ++  +  S FHVS L +Y
Sbjct: 1229 LQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Sed0000366 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.9e-28
Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL 60
            MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ----------------QKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                                     FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WV 180
              ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTV 1168

Query: 181  PSYLRLTN-GVVAYADVRRRDL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEI 240
              +L   N  +  Y D++ +++ EF+ G  V +K     G L   K  KL+P F GPF +
Sbjct: 1169 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGPFYV 1228

Query: 241  LERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY 243
            L++ G   Y L LP ++  +  S FHVS L +Y
Sbjct: 1229 LQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Sed0000366 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.9e-28
Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL 60
            MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ----------------QKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                                     FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WV 180
              ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTV 1168

Query: 181  PSYLRLTN-GVVAYADVRRRDL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEI 240
              +L   N  +  Y D++ +++ EF+ G  V +K     G L   K  KL+P F GPF +
Sbjct: 1169 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGPFYV 1228

Query: 241  LERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY 243
            L++ G   Y L LP ++  +  S FHVS L +Y
Sbjct: 1229 LQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Sed0000366 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.9e-28
Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL 60
            MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ----------------QKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                                     FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WV 180
              ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTV 1168

Query: 181  PSYLRLTN-GVVAYADVRRRDL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEI 240
              +L   N  +  Y D++ +++ EF+ G  V +K     G L   K  KL+P F GPF +
Sbjct: 1169 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGPFYV 1228

Query: 241  LERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY 243
            L++ G   Y L LP ++  +  S FHVS L +Y
Sbjct: 1229 LQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Sed0000366 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.9e-28
Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVPRAL 60
            MDFI+ LP +   ++ ++V+VDR +K A  +P   + T EQ A++F +++I Y G P+ +
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   ----------------QKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                                     FS  + PQTDGQTER NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYG-----KRCRSPVFGKRL------VIGEF-WV 180
              ++ L++ +YNN   SA +M PFE ++           P F  +        I  F  V
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTV 1168

Query: 181  PSYLRLTN-GVVAYADVRRRDL-EFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFEI 240
              +L   N  +  Y D++ +++ EF+ G  V +K     G L   K  KL+P F GPF +
Sbjct: 1169 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLAPSFAGPFYV 1228

Query: 241  LERIGKVAYRLALPPTLSAV-HSVFHVSMLRQY 243
            L++ G   Y L LP ++  +  S FHVS L +Y
Sbjct: 1229 LQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of Sed0000366 vs. ExPASy TrEMBL
Match: A0A5A7U6Z4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00460 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.1e-124
Identity = 217/346 (62.72%), Postives = 262/346 (75.72%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
            MDFI+GLPRT R F+ IWV+V+RLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 1154 MDFITGLPRTLRGFTVIWVVVNRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 1213

Query: 61   -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                         R LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 1214 VSDRDARFTSKFWRGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 1273

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
            D +L+LMEFAYNN Y++ I M PFEALYGK CRSPV+   +       P  ++ TN  + 
Sbjct: 1274 DSHLHLMEFAYNNSYQATIGMTPFEALYGKCCRSPVYWGEVGEQRLMGPELVQSTNEAIQ 1333

Query: 181  --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                          +YADVRR+DLEFEVG  VFLKVAPMRGVLRF +RGKLSPHFVGPFE
Sbjct: 1334 KIRSCMHTAQNRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPHFVGPFE 1393

Query: 241  ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
            +LERIG VAYRLALPP+LS VH VFHVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PVG
Sbjct: 1394 VLERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVG 1453

Query: 301  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
            +LA E K LRNREI  VK+ WR+  +EEATWERED+MR +YPELF+
Sbjct: 1454 VLAREVKVLRNREIPFVKILWRNHRVEEATWEREDDMRSRYPELFE 1499

[Close]

BLAST of Sed0000366 vs. ExPASy TrEMBL
Match: A0A5A7UZZ4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.6e-122
Identity = 217/346 (62.72%), Postives = 259/346 (74.86%), Query Frame = 0


Query: 1   MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
           MDFI GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 206 MDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 265

Query: 61  -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                        + LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 266 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 325

Query: 121 DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
           D +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  + 
Sbjct: 326 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 385

Query: 181 --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                         +YADVRR+DLEFEVG  VFLKVAPMRGVLRF KRGKLSP FVGPFE
Sbjct: 386 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVGPFE 445

Query: 241 ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
           ILERIG VAYRLALPP+L+  H VFHVSMLR+YVPDPSH+VD+EPL+++E++S+ E+PV 
Sbjct: 446 ILERIGPVAYRLALPPSLTTAHDVFHVSMLRKYVPDPSHVVDYEPLEIDENMSYTEQPVE 505

Query: 301 ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
           ILA E K LRN+EI LVKV WR+  +EEATWERED+MR +YPELF+
Sbjct: 506 ILAREVKTLRNKEIPLVKVLWRNHRIEEATWEREDDMRSRYPELFE 551

[Close]

BLAST of Sed0000366 vs. ExPASy TrEMBL
Match: A0A5A7UDB1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00190 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.4e-122
Identity = 216/346 (62.43%), Postives = 261/346 (75.43%), Query Frame = 0


Query: 1    MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
            MDFI+GLPRT + F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 1116 MDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVPVSI 1175

Query: 61   -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                         + LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 1176 VSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 1235

Query: 121  DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
            D +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  + 
Sbjct: 1236 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAIQ 1295

Query: 181  --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                          +YADVRR+DLEFEVG  VFLKVAPMRGVLRF +RGKLS HFVGPFE
Sbjct: 1296 KIKSRMRTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSSHFVGPFE 1355

Query: 241  ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
            ILERIG VAYRLALPP+LS VH VFHVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV 
Sbjct: 1356 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVE 1415

Query: 301  ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
            +LA E K LR++EI LVKV WR+  +EEATWERED+MR +YPELF+
Sbjct: 1416 VLAREVKTLRSKEIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 1461

[Close]

BLAST of Sed0000366 vs. ExPASy TrEMBL
Match: A0A5A7TPA9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18932G00010 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.4e-122
Identity = 214/346 (61.85%), Postives = 262/346 (75.72%), Query Frame = 0


Query: 1   MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
           MDFI+GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 44  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 103

Query: 61  -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                        + LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 104 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 163

Query: 121 DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
           D +L+LMEFAYNN Y++ I MAPFEALYG+ CRSPV    +       P  ++ TN  + 
Sbjct: 164 DSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQ 223

Query: 181 --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                         +YADVRR+DLEFE+G  VFLKVAPM+GVLRF +RGKLSP FVGPFE
Sbjct: 224 KIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 283

Query: 241 ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
           ILERIG VAYRLALPP+LSAVH VFH+SMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV 
Sbjct: 284 ILERIGPVAYRLALPPSLSAVHDVFHISMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 343

Query: 301 ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
           +LA E K LRN++I LVKV WR+  +EEATWERED+MR +YPELF+
Sbjct: 344 VLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELFE 389

[Close]

BLAST of Sed0000366 vs. ExPASy TrEMBL
Match: A0A5A7TDB5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41502G00010 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 7.4e-122
Identity = 216/346 (62.43%), Postives = 261/346 (75.43%), Query Frame = 0


Query: 1   MDFISGLPRTPRKFSQIWVIVDRLTKSAHFIPGRDTYTVEQWAQLFLEQIIRYHGVP--- 60
           MDFI+GLPRT R F+ IWV+VDRLTKSAHF+PG+ TYT  +WAQL++ +I+R HGVP   
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  -------------RALQKGLGTECSFSTTFHPQTDGQTERVNQILEDMLRACVLDFPGSW 120
                        + LQ  +GT   FST FHPQTDGQTER+NQ+LEDMLRAC L+FPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DQYLYLMEFAYNNDYRSAIEMAPFEALYGKRCRSPVFGKRLVIGEFWVPSYLRLTNGVV- 180
           D +L+LMEFAYNN Y++ I MAPFEALYGK CRSPV    +       P  ++ TN  V 
Sbjct: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNEAVQ 180

Query: 181 --------------AYADVRRRDLEFEVGQHVFLKVAPMRGVLRFGKRGKLSPHFVGPFE 240
                         +YADVRR+DLEFEVG  VFLKVAPM+GVLRF +RGKLSP FVGPFE
Sbjct: 181 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 240

Query: 241 ILERIGKVAYRLALPPTLSAVHSVFHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG 300
           ILER+G VAYRLALPP+LSAVH VFHVSMLR+YVPDPSH+VD EPL+++E+LS+ E+PV 
Sbjct: 241 ILERVGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHVVDCEPLEIDENLSYVEQPVE 300

Query: 301 ILAFETKALRNREIRLVKVQWRSQSLEEATWEREDEMRLQYPELFQ 316
           +LA E K LRN++I LVKV WR+  +EEATWERED+MR +YP+LF+
Sbjct: 301 VLAREVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPDLFE 346

The following BLAST results are available for this feature:

BLAST of Sed0000366 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051522.1	4.3e-124	62.72	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0060848.1	5.3e-122	62.72	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053234.1	9.0e-122	62.43	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0043401.1	9.0e-122	61.85	pol protein [Cucumis melo var. makuwa]	[more]
KAA0041424.1	1.5e-121	62.43	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Sed0000366 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	7.9e-28	31.87	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	7.9e-28	31.87	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	7.9e-28	31.87	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	7.9e-28	31.87	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	7.9e-28	31.87	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Sed0000366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U6Z4	2.1e-124	62.72	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UZZ4	2.6e-122	62.72	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE...	[more]
A0A5A7UDB1	4.4e-122	62.43	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10...	[more]
A0A5A7TPA9	4.4e-122	61.85	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18932G00010 ...	[more]
A0A5A7TDB5	7.4e-122	62.43	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41502G00010 ...	[more]

BLAST of Sed0000366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..144 e-value: 4.7E-28 score: 99.8
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 89..310
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 89..310
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..135 score: 9.002059
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 229..307
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000366.1	Sed0000366.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity