Sed0000360 (gene) Chayote v1

Overview


Name	Sed0000360
Type	gene
Organism	Sechium edule (Chayote v1)
Description	fasciclin-like arabinogalactan protein 11
Location	LG03: 13898544 .. 13899734 (-)
RNA-Seq Expression	Sed0000360
Synteny	Sed0000360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCAAACAAAAAACAGCTTTAAAACACTCTCCTCATGCTCTGTTCTTCCTGCTTCCTCAAGCAAAATCCCATCTCTTTCATCTCACCAAAATACCCAATTACTTTCCATCTTGAAATCCCCATTTCACCAAACCAAAATTTCCCTTCTTATAAAACCCCATTTTCAATCCCTCAAAAACAGAGCAATTCCAACAAACAAAAATTCCTCTGTTTTTCCCCACATTCATCATGAACAAACGTTTCCCAATCTCCATCTTCCTCGCCATCTTATTCTTCTCCAAATCCATTTCAGCTCAATCACCCGGCCCCTCCGGCCCGACAAACATCACGGCCATTCTCGAAAAAGCCGGCCAATACACAACCTTCCTGAAACTCCTCAAAATCACACAACAGAGCGATCAAATCAACAATCAACTCAACAACTCCAACCAAGGCCAAGGCCTCACCGTCTTCGCTCCGCCGGACAATGCCTTCACAAATCTCAAACCCGGAACTCTAAATTCGCTTTCCGATCAGCAAAAAGTCCAATTGGTTCAATTCCATGTCCTCCCTTCTTTCATTTCCATGTCCCAATTTCAAACCGTTAGCAACCCACTTCGGACTCAGGCCGGAAACAGCAATGCCGGCCAGTTTCCGTTGAATGTCACCACTTCTGGGTCGCAGGTTAATTTGACCACCGGCGTCGATGACGCCGTCGTCTCCAACACCATTTTCTCCGATGGAAAATTGGCTGTTTATCAGCTCGATAATGTGCTTCTCCCCGTTGATCTTTTTGGGACCGTGCCGGCGCCGGCACCGGCGCCGACCAAGCCGGTGAAGGCGGTTTCTGGTTCTGATGCTCCGGCTGCGGCTTCTAAGGATAGTTCTAGTGGTGACTCTGGCGCCGCCGTGGTTTTGAATTTCCGTTTTGCGGCGGCGGTTGCGGCGGTGGTTGGAGTTGTGGTTGCGTTTGGTTTGGAGCTATGAGGGTTTTTTATTGGTTTAGAGGATTTGATTGTTTTTTTGGAGTTGGAAGTGAATTTGAAGAATAATTTTTTTTTTTTTTTCAATGTCTATGTTGTATCTTTGTTGATTGTATTTTTCAATTTTGTTGTATGAAACTATGAATTGCCATACTTTTTTCTATATTCTTTGCTGAGGTTTTAATTTTTGTTTCTATATTCTTAATTAAAATTTTTGTTTCAATGTCA

mRNA sequence

CACCAAACAAAAAACAGCTTTAAAACACTCTCCTCATGCTCTGTTCTTCCTGCTTCCTCAAGCAAAATCCCATCTCTTTCATCTCACCAAAATACCCAATTACTTTCCATCTTGAAATCCCCATTTCACCAAACCAAAATTTCCCTTCTTATAAAACCCCATTTTCAATCCCTCAAAAACAGAGCAATTCCAACAAACAAAAATTCCTCTGTTTTTCCCCACATTCATCATGAACAAACGTTTCCCAATCTCCATCTTCCTCGCCATCTTATTCTTCTCCAAATCCATTTCAGCTCAATCACCCGGCCCCTCCGGCCCGACAAACATCACGGCCATTCTCGAAAAAGCCGGCCAATACACAACCTTCCTGAAACTCCTCAAAATCACACAACAGAGCGATCAAATCAACAATCAACTCAACAACTCCAACCAAGGCCAAGGCCTCACCGTCTTCGCTCCGCCGGACAATGCCTTCACAAATCTCAAACCCGGAACTCTAAATTCGCTTTCCGATCAGCAAAAAGTCCAATTGGTTCAATTCCATGTCCTCCCTTCTTTCATTTCCATGTCCCAATTTCAAACCGTTAGCAACCCACTTCGGACTCAGGCCGGAAACAGCAATGCCGGCCAGTTTCCGTTGAATGTCACCACTTCTGGGTCGCAGGTTAATTTGACCACCGGCGTCGATGACGCCGTCGTCTCCAACACCATTTTCTCCGATGGAAAATTGGCTGTTTATCAGCTCGATAATGTGCTTCTCCCCGTTGATCTTTTTGGGACCGTGCCGGCGCCGGCACCGGCGCCGACCAAGCCGGTGAAGGCGGTTTCTGGTTCTGATGCTCCGGCTGCGGCTTCTAAGGATAGTTCTAGTGGTGACTCTGGCGCCGCCGTGGTTTTGAATTTCCGTTTTGCGGCGGCGGTTGCGGCGGTGGTTGGAGTTGTGGTTGCGTTTGGTTTGGAGCTATGAGGGTTTTTTATTGGTTTAGAGGATTTGATTGTTTTTTTGGAGTTGGAAGTGAATTTGAAGAATAATTTTTTTTTTTTTTTCAATGTCTATGTTGTATCTTTGTTGATTGTATTTTTCAATTTTGTTGTATGAAACTATGAATTGCCATACTTTTTTCTATATTCTTTGCTGAGGTTTTAATTTTTGTTTCTATATTCTTAATTAAAATTTTTGTTTCAATGTCA

Coding sequence (CDS)

ATGAACAAACGTTTCCCAATCTCCATCTTCCTCGCCATCTTATTCTTCTCCAAATCCATTTCAGCTCAATCACCCGGCCCCTCCGGCCCGACAAACATCACGGCCATTCTCGAAAAAGCCGGCCAATACACAACCTTCCTGAAACTCCTCAAAATCACACAACAGAGCGATCAAATCAACAATCAACTCAACAACTCCAACCAAGGCCAAGGCCTCACCGTCTTCGCTCCGCCGGACAATGCCTTCACAAATCTCAAACCCGGAACTCTAAATTCGCTTTCCGATCAGCAAAAAGTCCAATTGGTTCAATTCCATGTCCTCCCTTCTTTCATTTCCATGTCCCAATTTCAAACCGTTAGCAACCCACTTCGGACTCAGGCCGGAAACAGCAATGCCGGCCAGTTTCCGTTGAATGTCACCACTTCTGGGTCGCAGGTTAATTTGACCACCGGCGTCGATGACGCCGTCGTCTCCAACACCATTTTCTCCGATGGAAAATTGGCTGTTTATCAGCTCGATAATGTGCTTCTCCCCGTTGATCTTTTTGGGACCGTGCCGGCGCCGGCACCGGCGCCGACCAAGCCGGTGAAGGCGGTTTCTGGTTCTGATGCTCCGGCTGCGGCTTCTAAGGATAGTTCTAGTGGTGACTCTGGCGCCGCCGTGGTTTTGAATTTCCGTTTTGCGGCGGCGGTTGCGGCGGTGGTTGGAGTTGTGGTTGCGTTTGGTTTGGAGCTATGA

Protein sequence

MNKRFPISIFLAILFFSKSISAQSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGVVVAFGLEL

Homology

[Close]

BLAST of Sed0000360 vs. NCBI nr
Match: XP_038883042.1 (fasciclin-like arabinogalactan protein 11 [Benincasa hispida])

HSP 1 Score: 387.5 bits (994), Expect = 8.6e-104
Identity = 207/247 (83.81%), Postives = 224/247 (90.69%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISAQS---PGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           +N  FPIS FL  L F +SISAQS   PGPSGPTNIT ILEK GQ++TF+KLLK TQQSD
Sbjct: 2   INNLFPISFFLIFLLFCQSISAQSTQPPGPSGPTNITGILEKGGQFSTFIKLLKSTQQSD 61

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTVFAPPDNAF+NLKPGTLNSLSDQQKVQL+QFHVLP+FISMSQFQ
Sbjct: 62  QINNQLNNSNQGQGLTVFAPPDNAFSNLKPGTLNSLSDQQKVQLIQFHVLPTFISMSQFQ 121

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQ+PLNVTTSGSQVNLTTGVDDAVVSNTI++DG+LAVYQ+D VLL
Sbjct: 122 TVSNPLRTQAGNSNAGQYPLNVTTSGSQVNLTTGVDDAVVSNTIYTDGQLAVYQVDKVLL 181

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFGTV APAPAP+KPVKAVSGSDAPA ASKD+SS DSGAA  LN+RFAAA  AVVG 
Sbjct: 182 PVDLFGTVAAPAPAPSKPVKAVSGSDAPAGASKDTSSDDSGAAAALNYRFAAAFGAVVGF 241

Query: 241 VVAFGLE 245
           VVAF L+
Sbjct: 242 VVAFALQ 248

[Close]

BLAST of Sed0000360 vs. NCBI nr
Match: XP_016900740.1 (PREDICTED: fasciclin-like arabinogalactan protein 11 [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 2.3e-101
Identity = 203/246 (82.52%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISAQS---PGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           +N  FPIS FL  L FS+S+SAQS   PGPSGPTNI+AILEK GQ++TF+KLLK TQQSD
Sbjct: 2   INNIFPISFFLISLLFSESVSAQSTQPPGPSGPTNISAILEKGGQFSTFIKLLKSTQQSD 61

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTVFAPPDNAF+NLKPGTLNSLSDQQKVQLVQ+HV+P+FISMSQFQ
Sbjct: 62  QINNQLNNSNQGQGLTVFAPPDNAFSNLKPGTLNSLSDQQKVQLVQYHVVPTFISMSQFQ 121

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVV+NTI++DG+LAVYQ+D VLL
Sbjct: 122 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVANTIYTDGQLAVYQVDKVLL 181

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFGTV APAPAP+KPVKAVSGSDAPA ASKD+SS D+GAA  +N+RF AA  AVVG 
Sbjct: 182 PVDLFGTVAAPAPAPSKPVKAVSGSDAPAGASKDTSSDDTGAAPAMNYRFTAAFGAVVGF 241

Query: 241 VVAFGL 244
           VVAF L
Sbjct: 242 VVAFVL 247

[Close]

BLAST of Sed0000360 vs. NCBI nr
Match: XP_022979163.1 (fasciclin-like arabinogalactan protein 11 [Cucurbita maxima])

HSP 1 Score: 368.6 bits (945), Expect = 4.1e-98
Identity = 202/247 (81.78%), Postives = 218/247 (88.26%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISA---QSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           MN  FPIS FL  L F  S+SA   QSP PSGPTNIT ILEKAGQ++TF+KLLK TQQSD
Sbjct: 33  MNTLFPISFFLISLLFCNSVSAQSTQSPAPSGPTNITGILEKAGQFSTFIKLLKSTQQSD 92

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTV APPDNAF NLKPGTLNSLSDQQKVQLVQFHVLP+FISMSQFQ
Sbjct: 93  QINNQLNNSNQGQGLTVLAPPDNAFANLKPGTLNSLSDQQKVQLVQFHVLPNFISMSQFQ 152

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGV DAVV+NTI++DG+LAVYQ+D VLL
Sbjct: 153 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVANTIYTDGQLAVYQVDKVLL 212

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFGTV APAPAP KPVKAVSGSDAPAAASKD+SS +SGAA  L++RF    AAVVG 
Sbjct: 213 PVDLFGTVDAPAPAPAKPVKAVSGSDAPAAASKDTSSDNSGAAEALSYRF----AAVVGF 272

Query: 241 VVAFGLE 245
           +VAF L+
Sbjct: 273 MVAFALQ 275

[Close]

BLAST of Sed0000360 vs. NCBI nr
Match: XP_004143241.1 (fasciclin-like arabinogalactan protein 11 [Cucumis sativus] >KGN48139.1 hypothetical protein Csa_004225 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 4.1e-98
Identity = 202/246 (82.11%), Postives = 221/246 (89.84%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISAQS---PGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           +N  FPIS FL  L FSKSISAQS   PG SGPTNI+AILEKAGQ++T  KLLK TQQSD
Sbjct: 2   INNIFPISFFLISLLFSKSISAQSTQPPGFSGPTNISAILEKAGQFSTMNKLLKSTQQSD 61

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTVFAPPDNAF+NLKPGTLNSLSDQQKVQLVQ+HV+P+FISMSQFQ
Sbjct: 62  QINNQLNNSNQGQGLTVFAPPDNAFSNLKPGTLNSLSDQQKVQLVQYHVVPTFISMSQFQ 121

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGV DAVV+NTI++DG+LAVYQ+D VLL
Sbjct: 122 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVANTIYTDGQLAVYQVDKVLL 181

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFGTV APAPAP+KPVKAVSG+DAPA ASKD+SS DSGAA  +++RFAAA  AVVG 
Sbjct: 182 PVDLFGTVAAPAPAPSKPVKAVSGADAPAGASKDTSSDDSGAAPAMSYRFAAAFGAVVGF 241

Query: 241 VVAFGL 244
           VV F L
Sbjct: 242 VVPFVL 247

[Close]

BLAST of Sed0000360 vs. NCBI nr
Match: KAG6604433.1 (Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.5 bits (942), Expect = 9.2e-98
Identity = 201/247 (81.38%), Postives = 218/247 (88.26%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISA---QSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           MN  FPIS FL  L F  S+SA   QSP PSGPTNIT ILEKAGQ++TF+KLLK TQQSD
Sbjct: 1   MNALFPISFFLVSLLFCNSVSAQSTQSPAPSGPTNITGILEKAGQFSTFIKLLKSTQQSD 60

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTV APPDNAF NLKPGTLNSLSDQQKVQLVQFHVLP+FISMSQFQ
Sbjct: 61  QINNQLNNSNQGQGLTVLAPPDNAFANLKPGTLNSLSDQQKVQLVQFHVLPNFISMSQFQ 120

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGV DAVV+NTI++DG+LAVYQ+D VLL
Sbjct: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVANTIYTDGQLAVYQVDKVLL 180

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFG+V APAPAP KPVKAVSGSDAPAAASKD+SS +SGAA  L++RF    AAVVG 
Sbjct: 181 PVDLFGSVEAPAPAPAKPVKAVSGSDAPAAASKDTSSDNSGAAEALSYRF----AAVVGF 240

Query: 241 VVAFGLE 245
           +VAF L+
Sbjct: 241 MVAFALQ 243

[Close]

BLAST of Sed0000360 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-61
Identity = 135/222 (60.81%), Postives = 164/222 (73.87%), Query Frame = 0


Query: 22  AQSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQLNNSNQGQGLTVFAPPDNA 81
           A +PGPSGPTNITAILEKAGQ+T F++LLK TQ SDQIN QLN+S+   GLTVFAP DNA
Sbjct: 26  APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSS-SNGLTVFAPTDNA 85

Query: 82  FTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTT 141
           F +LK GTLNSLSDQQKVQLVQFHVLP+ I+M QFQTVSNPLRTQAG+   G+FPLN+T+
Sbjct: 86  FNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITS 145

Query: 142 SGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLFGTVPAPAPAPTKPVKAVSG 201
           SG+QVN+TTGV  A V+N+++SD +LAVYQ+D VLLP+ +FG+  APAPAP K      G
Sbjct: 146 SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSVAPAPAPEKGGSVSKG 205

Query: 202 SDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGVVVAFGL 244
           S +      DS+  DS  A    F F   +  V  +  +  L
Sbjct: 206 SASGGDDGGDST--DSSDAERTGFGFGIRITTVAAIAASSSL 244

[Close]

BLAST of Sed0000360 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52
Identity = 119/224 (53.12%), Postives = 155/224 (69.20%), Query Frame = 0


Query: 17  SKSISAQSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQLNNSNQGQGLTVFA 76
           S+   A +P P GPTN+T ILEKAGQ+T F++LLK T  ++Q+  QLNNS+   G+T+FA
Sbjct: 24  SQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSD--NGITIFA 83

Query: 77  PPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNPLRTQAGNSNAGQFP 136
           P D++FT LK GTLNSL+D+Q+V+L+QFHV+PS++S S FQT+SNPLRTQAG+S  G FP
Sbjct: 84  PSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFP 143

Query: 137 LNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLFG-TVPAPAPAPTKP 196
           LNVTTSG+ VN+T+GV +  VS  ++SDG+LAVYQ+D VLLP  +F    PAPAPAP+  
Sbjct: 144 LNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPRPPAPAPAPSVS 203

Query: 197 VKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGVVV 240
                  D+      DSSS DS A      R   +V   V   V
Sbjct: 204 KSKKKKDDS------DSSSDDSPADASFALRNVGSVCDAVSFCV 239

[Close]

BLAST of Sed0000360 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.5e-39
Identity = 103/228 (45.18%), Postives = 142/228 (62.28%), Query Frame = 0


Query: 6   PISIFLAILFFSKSI---SAQSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQ 65
           P+ +  A+L  +K+    +A +P P+GP N+TAILEK GQ+TTF+ LL ITQ   Q+N Q
Sbjct: 10  PLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQVNIQ 69

Query: 66  LNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNP 125
           +N+S+  +G+TVFAP DNAF NLKPGTLN LS   +V+L+ +HV P + SM    +VSNP
Sbjct: 70  VNSSS--EGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSNP 129

Query: 126 LRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLF 185
           +RTQA   + G + LN T   +Q+N++TG  +  +SN++     LAVY +D VLLP ++F
Sbjct: 130 VRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMF 189

Query: 186 G--TVPAPAPAPTKPVKAV---SGSDAPAAASKDSSSGDSGAAVVLNF 226
           G   +   APAP      V   SGS   AA+  D  SG     V L F
Sbjct: 190 GEHKLSPIAPAPKSKSGGVTDDSGSTKKAASPSD-KSGSGEKKVGLGF 234

[Close]

BLAST of Sed0000360 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.0e-38
Identity = 102/220 (46.36%), Postives = 138/220 (62.73%), Query Frame = 0


Query: 9   IFLAILFFSKSISAQ----SPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQLN 68
           + L  +F S  I+AQ    +PGP+GP NITAILEK GQ+ T ++LL  TQ  +QIN Q+N
Sbjct: 9   LLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQIN 68

Query: 69  NSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNPLR 128
           +S+  +G+TV AP DNAF NLKPGTLN LS   +V+L+ +HV P F ++    +VSNP+R
Sbjct: 69  SSS--EGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVR 128

Query: 129 TQA-GNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLFG 188
           TQA G    G + LN T  G+QVN++TGV +  +S ++  +  LAVY +D VLLP ++FG
Sbjct: 129 TQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFG 188

Query: 189 ----TVPAPAPAPTKP-VKAVSGSDAPAAASKDSSSGDSG 219
               +  AP P    P V   S S   AAA  +S    SG
Sbjct: 189 ERKISPMAPPPKSKSPDVSDDSESSKKAAAPSESEKSGSG 226

[Close]

BLAST of Sed0000360 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-36
Identity = 105/248 (42.34%), Postives = 146/248 (58.87%), Query Frame = 0


Query: 5   FPISIFLAILFFSKSISAQSPGPS-----GPTNITAILEKAGQYTTFLKLLKITQQSDQI 64
           F   + L  LF    I +Q   P+      P N+TAILE   Q+TT ++LL  TQ   Q+
Sbjct: 6   FSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQV 65

Query: 65  NNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTV 124
           + QLN+S+  QG+T+FAP DNAF  LKPGTLNSL+ QQ++QL+ +H++P + S+S     
Sbjct: 66  SVQLNSSD--QGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLA 125

Query: 125 SNPLRTQAGNSNAGQFPLNVT--TSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 184
           SNP+RTQA   + G F LN T     +QVN++TGV +  ++N +     LAVY +D+VLL
Sbjct: 126 SNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLL 185

Query: 185 PVDLFG--TVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVV 244
           P +LFG  T P  APAP K   + S +D+PAA  +  S+G S     L            
Sbjct: 186 PEELFGTKTTPTGAPAP-KSSTSSSDADSPAADDEHKSAGSSVKRTSL------------ 238

[Close]

BLAST of Sed0000360 vs. ExPASy TrEMBL
Match: A0A1S4DYE6 (fasciclin-like arabinogalactan protein 11 OS=Cucumis melo OX=3656 GN=LOC103491194 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 203/246 (82.52%), Postives = 224/246 (91.06%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISAQS---PGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           +N  FPIS FL  L FS+S+SAQS   PGPSGPTNI+AILEK GQ++TF+KLLK TQQSD
Sbjct: 2   INNIFPISFFLISLLFSESVSAQSTQPPGPSGPTNISAILEKGGQFSTFIKLLKSTQQSD 61

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTVFAPPDNAF+NLKPGTLNSLSDQQKVQLVQ+HV+P+FISMSQFQ
Sbjct: 62  QINNQLNNSNQGQGLTVFAPPDNAFSNLKPGTLNSLSDQQKVQLVQYHVVPTFISMSQFQ 121

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVV+NTI++DG+LAVYQ+D VLL
Sbjct: 122 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVANTIYTDGQLAVYQVDKVLL 181

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFGTV APAPAP+KPVKAVSGSDAPA ASKD+SS D+GAA  +N+RF AA  AVVG 
Sbjct: 182 PVDLFGTVAAPAPAPSKPVKAVSGSDAPAGASKDTSSDDTGAAPAMNYRFTAAFGAVVGF 241

Query: 241 VVAFGL 244
           VVAF L
Sbjct: 242 VVAFVL 247

[Close]

BLAST of Sed0000360 vs. ExPASy TrEMBL
Match: A0A6J1IVC0 (fasciclin-like arabinogalactan protein 11 OS=Cucurbita maxima OX=3661 GN=LOC111478882 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.0e-98
Identity = 202/247 (81.78%), Postives = 218/247 (88.26%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISA---QSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           MN  FPIS FL  L F  S+SA   QSP PSGPTNIT ILEKAGQ++TF+KLLK TQQSD
Sbjct: 33  MNTLFPISFFLISLLFCNSVSAQSTQSPAPSGPTNITGILEKAGQFSTFIKLLKSTQQSD 92

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTV APPDNAF NLKPGTLNSLSDQQKVQLVQFHVLP+FISMSQFQ
Sbjct: 93  QINNQLNNSNQGQGLTVLAPPDNAFANLKPGTLNSLSDQQKVQLVQFHVLPNFISMSQFQ 152

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGV DAVV+NTI++DG+LAVYQ+D VLL
Sbjct: 153 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVANTIYTDGQLAVYQVDKVLL 212

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFGTV APAPAP KPVKAVSGSDAPAAASKD+SS +SGAA  L++RF    AAVVG 
Sbjct: 213 PVDLFGTVDAPAPAPAKPVKAVSGSDAPAAASKDTSSDNSGAAEALSYRF----AAVVGF 272

Query: 241 VVAFGLE 245
           +VAF L+
Sbjct: 273 MVAFALQ 275

[Close]

BLAST of Sed0000360 vs. ExPASy TrEMBL
Match: A0A0A0KH46 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G445040 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.0e-98
Identity = 202/246 (82.11%), Postives = 221/246 (89.84%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISAQS---PGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           +N  FPIS FL  L FSKSISAQS   PG SGPTNI+AILEKAGQ++T  KLLK TQQSD
Sbjct: 2   INNIFPISFFLISLLFSKSISAQSTQPPGFSGPTNISAILEKAGQFSTMNKLLKSTQQSD 61

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTVFAPPDNAF+NLKPGTLNSLSDQQKVQLVQ+HV+P+FISMSQFQ
Sbjct: 62  QINNQLNNSNQGQGLTVFAPPDNAFSNLKPGTLNSLSDQQKVQLVQYHVVPTFISMSQFQ 121

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGV DAVV+NTI++DG+LAVYQ+D VLL
Sbjct: 122 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVANTIYTDGQLAVYQVDKVLL 181

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFGTV APAPAP+KPVKAVSG+DAPA ASKD+SS DSGAA  +++RFAAA  AVVG 
Sbjct: 182 PVDLFGTVAAPAPAPSKPVKAVSGADAPAGASKDTSSDDSGAAPAMSYRFAAAFGAVVGF 241

Query: 241 VVAFGL 244
           VV F L
Sbjct: 242 VVPFVL 247

[Close]

BLAST of Sed0000360 vs. ExPASy TrEMBL
Match: A0A6J1EDI6 (fasciclin-like arabinogalactan protein 11 OS=Cucurbita moschata OX=3662 GN=LOC111433203 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97
Identity = 200/247 (80.97%), Postives = 217/247 (87.85%), Query Frame = 0


Query: 1   MNKRFPISIFLAILFFSKSISA---QSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSD 60
           MN  FPIS FL  L F  S+SA   QSP PSGPTNIT ILEKAGQ++TF+KLLK TQQSD
Sbjct: 1   MNALFPISFFLVSLLFCNSVSAQSTQSPAPSGPTNITGILEKAGQFSTFIKLLKSTQQSD 60

Query: 61  QINNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQ 120
           QINNQLNNSNQGQGLTV APPDNAF NLKPGTLNSLSDQQKVQLVQFHVLP+FISMSQFQ
Sbjct: 61  QINNQLNNSNQGQGLTVLAPPDNAFANLKPGTLNSLSDQQKVQLVQFHVLPNFISMSQFQ 120

Query: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 180
           TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGV DAVV+NTI++DG+LAVYQ+D VLL
Sbjct: 121 TVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVANTIYTDGQLAVYQVDKVLL 180

Query: 181 PVDLFGTVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGV 240
           PVDLFG+V APAPAP KPVKAVSGSDAPAAASKD+SS +SGAA  L++RF    AAVVG 
Sbjct: 181 PVDLFGSVEAPAPAPAKPVKAVSGSDAPAAASKDTSSDNSGAAEALSYRF----AAVVGF 240

Query: 241 VVAFGLE 245
           +VA  L+
Sbjct: 241 MVALALQ 243

[Close]

BLAST of Sed0000360 vs. ExPASy TrEMBL
Match: A0A5A7TVT2 (Fasciclin-like arabinogalactan protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00630 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.9e-96
Identity = 191/226 (84.51%), Postives = 210/226 (92.92%), Query Frame = 0


Query: 18  KSISAQSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQLNNSNQGQGLTVFAP 77
           K+ S Q PGPSGPTNI+AILEK GQ++TF+KLLK TQQSDQINNQLNNSNQGQGLTVFAP
Sbjct: 28  KAQSTQPPGPSGPTNISAILEKGGQFSTFIKLLKSTQQSDQINNQLNNSNQGQGLTVFAP 87

Query: 78  PDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNPLRTQAGNSNAGQFPL 137
           PDNAF+NLKPGTLNSLSDQQKVQLVQ+HV+P+FISMSQFQTVSNPLRTQAGNSNAGQFPL
Sbjct: 88  PDNAFSNLKPGTLNSLSDQQKVQLVQYHVVPTFISMSQFQTVSNPLRTQAGNSNAGQFPL 147

Query: 138 NVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLFGTVPAPAPAPTKPVK 197
           NVTTSGSQVNLTTGVDDAVV+NTI++DG+LAVYQ+D VLLPVDLFGTV APAPAP+KPVK
Sbjct: 148 NVTTSGSQVNLTTGVDDAVVANTIYTDGQLAVYQVDKVLLPVDLFGTVAAPAPAPSKPVK 207

Query: 198 AVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGVVVAFGL 244
           AVSGSDAPA ASKD+SS D+GAA  +N+RF AA  AVVG VVAF L
Sbjct: 208 AVSGSDAPAGASKDTSSDDTGAAPAMNYRFTAAFGAVVGFVVAFVL 253

[Close]

BLAST of Sed0000360 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-62
Identity = 135/222 (60.81%), Postives = 164/222 (73.87%), Query Frame = 0


Query: 22  AQSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQLNNSNQGQGLTVFAPPDNA 81
           A +PGPSGPTNITAILEKAGQ+T F++LLK TQ SDQIN QLN+S+   GLTVFAP DNA
Sbjct: 26  APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSS-SNGLTVFAPTDNA 85

Query: 82  FTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTT 141
           F +LK GTLNSLSDQQKVQLVQFHVLP+ I+M QFQTVSNPLRTQAG+   G+FPLN+T+
Sbjct: 86  FNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITS 145

Query: 142 SGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLFGTVPAPAPAPTKPVKAVSG 201
           SG+QVN+TTGV  A V+N+++SD +LAVYQ+D VLLP+ +FG+  APAPAP K      G
Sbjct: 146 SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSVAPAPAPEKGGSVSKG 205

Query: 202 SDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGVVVAFGL 244
           S +      DS+  DS  A    F F   +  V  +  +  L
Sbjct: 206 SASGGDDGGDST--DSSDAERTGFGFGIRITTVAAIAASSSL 244

[Close]

BLAST of Sed0000360 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-53
Identity = 119/224 (53.12%), Postives = 155/224 (69.20%), Query Frame = 0


Query: 17  SKSISAQSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQLNNSNQGQGLTVFA 76
           S+   A +P P GPTN+T ILEKAGQ+T F++LLK T  ++Q+  QLNNS+   G+T+FA
Sbjct: 24  SQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSD--NGITIFA 83

Query: 77  PPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNPLRTQAGNSNAGQFP 136
           P D++FT LK GTLNSL+D+Q+V+L+QFHV+PS++S S FQT+SNPLRTQAG+S  G FP
Sbjct: 84  PSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFP 143

Query: 137 LNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLFG-TVPAPAPAPTKP 196
           LNVTTSG+ VN+T+GV +  VS  ++SDG+LAVYQ+D VLLP  +F    PAPAPAP+  
Sbjct: 144 LNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPRPPAPAPAPSVS 203

Query: 197 VKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVVGVVV 240
                  D+      DSSS DS A      R   +V   V   V
Sbjct: 204 KSKKKKDDS------DSSSDDSPADASFALRNVGSVCDAVSFCV 239

[Close]

BLAST of Sed0000360 vs. TAIR 10
Match: AT1G03870.1 (FASCICLIN-like arabinoogalactan 9 )

HSP 1 Score: 162.9 bits (411), Expect = 3.2e-40
Identity = 103/228 (45.18%), Postives = 142/228 (62.28%), Query Frame = 0


Query: 6   PISIFLAILFFSKSI---SAQSPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQ 65
           P+ +  A+L  +K+    +A +P P+GP N+TAILEK GQ+TTF+ LL ITQ   Q+N Q
Sbjct: 10  PLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQVNIQ 69

Query: 66  LNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNP 125
           +N+S+  +G+TVFAP DNAF NLKPGTLN LS   +V+L+ +HV P + SM    +VSNP
Sbjct: 70  VNSSS--EGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSNP 129

Query: 126 LRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLF 185
           +RTQA   + G + LN T   +Q+N++TG  +  +SN++     LAVY +D VLLP ++F
Sbjct: 130 VRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMF 189

Query: 186 G--TVPAPAPAPTKPVKAV---SGSDAPAAASKDSSSGDSGAAVVLNF 226
           G   +   APAP      V   SGS   AA+  D  SG     V L F
Sbjct: 190 GEHKLSPIAPAPKSKSGGVTDDSGSTKKAASPSD-KSGSGEKKVGLGF 234

[Close]

BLAST of Sed0000360 vs. TAIR 10
Match: AT5G44130.1 (FASCICLIN-like arabinogalactan protein 13 precursor )

HSP 1 Score: 161.8 bits (408), Expect = 7.1e-40
Identity = 102/220 (46.36%), Postives = 138/220 (62.73%), Query Frame = 0


Query: 9   IFLAILFFSKSISAQ----SPGPSGPTNITAILEKAGQYTTFLKLLKITQQSDQINNQLN 68
           + L  +F S  I+AQ    +PGP+GP NITAILEK GQ+ T ++LL  TQ  +QIN Q+N
Sbjct: 9   LLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQIN 68

Query: 69  NSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTVSNPLR 128
           +S+  +G+TV AP DNAF NLKPGTLN LS   +V+L+ +HV P F ++    +VSNP+R
Sbjct: 69  SSS--EGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVR 128

Query: 129 TQA-GNSNAGQFPLNVTTSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLLPVDLFG 188
           TQA G    G + LN T  G+QVN++TGV +  +S ++  +  LAVY +D VLLP ++FG
Sbjct: 129 TQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFG 188

Query: 189 ----TVPAPAPAPTKP-VKAVSGSDAPAAASKDSSSGDSG 219
               +  AP P    P V   S S   AAA  +S    SG
Sbjct: 189 ERKISPMAPPPKSKSPDVSDDSESSKKAAAPSESEKSGSG 226

[Close]

BLAST of Sed0000360 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 154.8 bits (390), Expect = 8.7e-38
Identity = 105/248 (42.34%), Postives = 146/248 (58.87%), Query Frame = 0


Query: 5   FPISIFLAILFFSKSISAQSPGPS-----GPTNITAILEKAGQYTTFLKLLKITQQSDQI 64
           F   + L  LF    I +Q   P+      P N+TAILE   Q+TT ++LL  TQ   Q+
Sbjct: 6   FSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQV 65

Query: 65  NNQLNNSNQGQGLTVFAPPDNAFTNLKPGTLNSLSDQQKVQLVQFHVLPSFISMSQFQTV 124
           + QLN+S+  QG+T+FAP DNAF  LKPGTLNSL+ QQ++QL+ +H++P + S+S     
Sbjct: 66  SVQLNSSD--QGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLA 125

Query: 125 SNPLRTQAGNSNAGQFPLNVT--TSGSQVNLTTGVDDAVVSNTIFSDGKLAVYQLDNVLL 184
           SNP+RTQA   + G F LN T     +QVN++TGV +  ++N +     LAVY +D+VLL
Sbjct: 126 SNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLL 185

Query: 185 PVDLFG--TVPAPAPAPTKPVKAVSGSDAPAAASKDSSSGDSGAAVVLNFRFAAAVAAVV 244
           P +LFG  T P  APAP K   + S +D+PAA  +  S+G S     L            
Sbjct: 186 PEELFGTKTTPTGAPAP-KSSTSSSDADSPAADDEHKSAGSSVKRTSL------------ 238

The following BLAST results are available for this feature:

BLAST of Sed0000360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883042.1	8.6e-104	83.81	fasciclin-like arabinogalactan protein 11 [Benincasa hispida]	[more]
XP_016900740.1	2.3e-101	82.52	PREDICTED: fasciclin-like arabinogalactan protein 11 [Cucumis melo]	[more]
XP_022979163.1	4.1e-98	81.78	fasciclin-like arabinogalactan protein 11 [Cucurbita maxima]	[more]
XP_004143241.1	4.1e-98	82.11	fasciclin-like arabinogalactan protein 11 [Cucumis sativus] >KGN48139.1 hypothet...	[more]
KAG6604433.1	9.2e-98	81.38	Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Sed0000360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEJ6	1.9e-61	60.81	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEE9	2.1e-52	53.13	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9ZWA8	4.5e-39	45.18	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]
Q9FFH6	1.0e-38	46.36	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9SIL7	1.2e-36	42.34	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]

BLAST of Sed0000360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DYE6	1.1e-101	82.52	fasciclin-like arabinogalactan protein 11 OS=Cucumis melo OX=3656 GN=LOC10349119...	[more]
A0A6J1IVC0	2.0e-98	81.78	fasciclin-like arabinogalactan protein 11 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0KH46	2.0e-98	82.11	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G445040 PE=3 S...	[more]
A0A6J1EDI6	2.2e-97	80.97	fasciclin-like arabinogalactan protein 11 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A5A7TVT2	1.9e-96	84.51	Fasciclin-like arabinogalactan protein 11 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Sed0000360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03170.1	1.3e-62	60.81	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G60490.1	1.5e-53	53.13	FASCICLIN-like arabinogalactan-protein 12	[more]
AT1G03870.1	3.2e-40	45.18	FASCICLIN-like arabinoogalactan 9	[more]
AT5G44130.1	7.1e-40	46.36	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT2G20520.1	8.7e-38	42.34	FASCICLIN-like arabinogalactan 6	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 73..179 e-value: 2.2E-21 score: 87.0
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 42..178 e-value: 5.9E-18 score: 65.3
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 30..176 score: 20.481815
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 16..178 e-value: 3.2E-19 score: 71.6
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 28..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..215
None	No IPR available	PANTHER	PTHR32077:SF65	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11	coord: 5..239
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 5..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000360.1	Sed0000360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane