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Sed0000319 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCTCTATAGCTACGAATATAAGAATTCGAAGCTGACGATTCCGGCGACACAAAAGCAACCCGAAAATCTTCACCCACCGCATCCACATTCCTTCCGATTCTTCTCCGCCGTGATTTTCCGGTGAAGAAAACGATCAAACACTCGGCCGAAATCCATCTTCTACTTTGAATCCACAGGTAATTCGTACTTGTCTTGGATCCTTCACTGCAAATTTGTTTCTACTCTTTACAAACCCTAATGCTGTTCATCTTACGTTGAATTTTTTGTAGCGATTTTTGGGCGTTTCTCATTCCGATGCTCGCTTTTCTTGTTGAGCTTTCGAATCATTTTAGCTATTTTCTCCGATTGTGGTTTGAATTTTGCCACATGATCTTTCACATCCTGATTCTAATTGATCACTCATTGGATTAGATGAAATGTGCGAAATGAATTTGTAGATCGAAGTGTAAAAATATGTAAACGTGAGGGGAGGGCGAAGTGTAGCTTTCACATCCTGATGCTCGTTTTTCTTTTCGAGCTTTCGAATCGTTTTAGCTATTTTCTCCCGTTATGGATTGAATTTTGCTACCTGAACTTTCACGTCCAGATTTTAATTGATCACTCCTCGAATTAATGTGGAAAATGAGTTAGTCGATCGAAGTGTAGTCCCTAAAGGGGTGGTGCCGTGGTCGAAAGCTTGGGATTTGAAGTTACGTTTCCCTCAAGGTCCGAGTTTGATATTAATTTGTAGACACCTCACGTGTTGTTTTTTTAAACAAAGTAACCACACCTGCCCCTAAGCCCCTAAGCCAGGCACCGGAGATATCGAAGGAGTAATGTCATAGGTGAGTCTCGAACTCAGGACCTTGAGGGGAGCATACCCTCAAAGCCCAAGTTTTGAACCATTGCGCCACCGTTTGGAGACAACACCTCCCGTTTTTTCATTCTTTCGATGTCGAGCTATGCCTAGCTCAGGGACTAGAGTAATTACCTCGATAATAGTGGAGCAAAACTCTGATTTCTCAGTTTTCAACGAACAAAAAAAGAAAAAAAGAAAAGGATCGAAGTGTTAAAACATGTAAAAGTGTAATTTCATACCATCAATGAAATCGTTTCTTATAAAAAAAAACATGTAAAAGTGAGGGAATGGTGAAGTGTAGGTTTTAGGAATTGCATTTTGATGATTTGTGATAAAACTTACAGGTTGGATTCGTTTGAAAGTGATCGGAAGAAAGCGTTGTGTATAAGCGCAAGATGGATGGTCGAAGAAGTTATGTCCCTCCTGCATATGTTCCATTAGGGCAGTCTGATTCAGAAGCGGAGATCATCTCGGGAGATGAGGTCCGCCCCACACCAAATGAACTCAAGGATGGATTATCACAATGGTCGTCTGGAATCTGTGCATGTTGCGATGATATGCAGAGCTGTATGCTACTTTCTGCCTTCTGACCTTGATTTATGCGAAGGAAAAATTATGAAGGTGCATCTTGAGTGAATGTGTTATTATATCTAAATGTTAGATATTTTAACTTGGACCAGTGGGTGTTCCCATTATAGAAACTATCGTATCCGGTTGTGAAATATAAGTTTGCTCTACTATCATGGAGTGACCTAGTGGTTAAGAGGTTATACGTTCAATCCATGATGGTCACCTATCTAGGAATTAATTTCCTAAAGTTTCATTTGACATTCAAATGTTGTGGGTTCAAGTGATAGTAGTCGAAAAATGCATCAGCTGGCCTTGATAGTCACAAATAAAAAAAAAAACTTGCTCTGTCACTTATTTTTCAGTGTTATAAGACCCTTGTTAGAAACAATTTTTTTGTGATTTGCGAACCAACTACTCCTGTCAAGGTAAGAAATCTATAAGATTACCTATTTTGGGGCTACAGATTTCATTAGTTCTCTAATTAGTTCGAGTTGTACGGTCAATTTGTGCCCCTACTAGTTTCGACCATCGAAGTATGTATAGCGATTTACTGATCATGGATTCATGGGTGTAAAGTATTTGAAATATAATAGGACACTTGATCTTGTGCACTTTTAGTTTGTTAGATACCAAACATAATTTAGATAATAGGATGACATGAAACGTACCTCTTTTTATTTTTGTAGTGGAATGAGCAGGTTTAATATTGCTATTGACAGTAGTATGATTTGAGTACAAAAGCATTGCATTTAAAATGATCTTGCATGTTCAATGAGTAGCTCATTGCAACATTTTGTTGGCGCAGGTTTTATTGGCCTAATTTGTCCATGTTTTCTGTTTGGGAAGAACGCAGAACTCTTGGGTTCTCGAACAATATTTGGGTCATGTGCAACTCATTTCATTTTGTGGGCACTAATGAACACAGTCTGCTGCTTGTTGACTGATGGACTTTTGTGGAATCTACCCGGATGCTTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTTCGGTCGAAGTACAATTTGCCGGTATGATAACACACTTATTTCCTTTTCATTGCTTATTACCATTATTATGTTTCTACTATCCACTTGTTCATGGTTTTGCAAGCATGAGTAGTGTACGGATATGTACATGGCATGTAGCATTCATAAACGTTGTTATGCGATTTCTTCTGATATGCTTGTCTATGAGAAAAATAAAATATATGGCTGAGTGATCAAAAGGGCCTCAGAGAATTAAGAGATGATGGGTTTCATAACGACTACTTACCTAGGAATTAATTTTTTACGAGTTTTCTTGATAGTAAAGGTAAGATGGTATGCCGTGTGCATATGCTGGTTCAGACACTCCCAAATTAAAAAAGGGGAATTCAATGTATGTAGTATTTTTCTTTAGGTTTGTTTCTACACACGGCTCTAATGCCCTTATCTCTGCCATATAATGTAGCCTAGTTCATTGCAATTTGTGTTCTTTTTAAGCTTAGTCGACGGGTTAGCTTTGCAGATCACTACATTTCCATAAGCCACACCTTTTGATTGCTGCAATGTGATGCAGGAAGCACCTTGTGGAGACTTCGTGACCCACTTTTTCTGCCATTTCTGTGCTATCTGTCAAGAATATAGGGAGATTCGTGAAAGAGCGGGAGGATCCGGTTCCCATGATTTGAGTATGGCTGTTGTTACTCCGCCAACAACTCAAACAATGGATTCTAACCCGGAAAAGTAGTTGCTTCTTTGCTCGAGCTACTGAGAAATGCCGGTAATTTTATTAGATTTATCGCTTAGCACAGAGTTCTTGTTCCCTCTAAACTATGGGATTTTTCATAGTTTCTTCTATACCCTTCTATTATTATTGGAATTTTGCCCCTCCTTTTGTCTGGTTTAATATCATAGTGCTAACAATTCAGTACCTTGTACTGATTGATAAGTTTAGTTTAAAAAAAAACTTTAACATGGAAACATGAGTTAATATGGTTGGTAAATTGATGTTAAATTACGTTGATGTACTGTTTGTTCGATGTTAGAGCTGAAAACAAGAGTAATAATGC CATCTCTATAGCTACGAATATAAGAATTCGAAGCTGACGATTCCGGCGACACAAAAGCAACCCGAAAATCTTCACCCACCGCATCCACATTCCTTCCGATTCTTCTCCGCCGTGATTTTCCGGTGAAGAAAACGATCAAACACTCGGCCGAAATCCATCTTCTACTTTGAATCCACAGGTTGGATTCGTTTGAAAGTGATCGGAAGAAAGCGTTGTGTATAAGCGCAAGATGGATGGTCGAAGAAGTTATGTCCCTCCTGCATATGTTCCATTAGGGCAGTCTGATTCAGAAGCGGAGATCATCTCGGGAGATGAGGTCCGCCCCACACCAAATGAACTCAAGGATGGATTATCACAATGGTCGTCTGGAATCTGTGCATGTTGCGATGATATGCAGAGCTGTTTTATTGGCCTAATTTGTCCATGTTTTCTGTTTGGGAAGAACGCAGAACTCTTGGGTTCTCGAACAATATTTGGGTCATGTGCAACTCATTTCATTTTGTGGGCACTAATGAACACAGTCTGCTGCTTGTTGACTGATGGACTTTTGTGGAATCTACCCGGATGCTTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTTCGGTCGAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTCGTGACCCACTTTTTCTGCCATTTCTGTGCTATCTGTCAAGAATATAGGGAGATTCGTGAAAGAGCGGGAGGATCCGGTTCCCATGATTTGAGTATGGCTGTTGTTACTCCGCCAACAACTCAAACAATGGATTCTAACCCGGAAAAGTAGTTGCTTCTTTGCTCGAGCTACTGAGAAATGCCGGTAATTTTATTAGATTTATCGCTTAGCACAGAGTTCTTGTTCCCTCTAAACTATGGGATTTTTCATAGTTTCTTCTATACCCTTCTATTATTATTGGAATTTTGCCCCTCCTTTTGTCTGGTTTAATATCATAGTGCTAACAATTCAGTACCTTGTACTGATTGATAAGTTTAGTTTAAAAAAAAACTTTAACATGGAAACATGAGTTAATATGGTTGGTAAATTGATGTTAAATTACGTTGATGTACTGTTTGTTCGATGTTAGAGCTGAAAACAAGAGTAATAATGC ATGGATGGTCGAAGAAGTTATGTCCCTCCTGCATATGTTCCATTAGGGCAGTCTGATTCAGAAGCGGAGATCATCTCGGGAGATGAGGTCCGCCCCACACCAAATGAACTCAAGGATGGATTATCACAATGGTCGTCTGGAATCTGTGCATGTTGCGATGATATGCAGAGCTGTTTTATTGGCCTAATTTGTCCATGTTTTCTGTTTGGGAAGAACGCAGAACTCTTGGGTTCTCGAACAATATTTGGGTCATGTGCAACTCATTTCATTTTGTGGGCACTAATGAACACAGTCTGCTGCTTGTTGACTGATGGACTTTTGTGGAATCTACCCGGATGCTTTCTTGCATGTTATGCTTGTGGCTACCGCAAGGCCCTTCGGTCGAAGTACAATTTGCCGGAAGCACCTTGTGGAGACTTCGTGACCCACTTTTTCTGCCATTTCTGTGCTATCTGTCAAGAATATAGGGAGATTCGTGAAAGAGCGGGAGGATCCGGTTCCCATGATTTGAGTATGGCTGTTGTTACTCCGCCAACAACTCAAACAATGGATTCTAACCCGGAAAAGTAG MDGRRSYVPPAYVPLGQSDSEAEIISGDEVRPTPNELKDGLSQWSSGICACCDDMQSCFIGLICPCFLFGKNAELLGSRTIFGSCATHFILWALMNTVCCLLTDGLLWNLPGCFLACYACGYRKALRSKYNLPEAPCGDFVTHFFCHFCAICQEYREIRERAGGSGSHDLSMAVVTPPTTQTMDSNPEK Homology
BLAST of Sed0000319 vs. NCBI nr
Match: XP_038903486.1 (protein PLANT CADMIUM RESISTANCE 10 [Benincasa hispida]) HSP 1 Score: 383.3 bits (983), Expect = 1.2e-102 Identity = 175/189 (92.59%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of Sed0000319 vs. NCBI nr
Match: XP_008443175.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 10 [Cucumis melo]) HSP 1 Score: 378.3 bits (970), Expect = 4.0e-101 Identity = 170/188 (90.43%), Postives = 179/188 (95.21%), Query Frame = 0
BLAST of Sed0000319 vs. NCBI nr
Match: KAE8651159.1 (hypothetical protein Csa_002610 [Cucumis sativus]) HSP 1 Score: 373.6 bits (958), Expect = 9.9e-100 Identity = 168/188 (89.36%), Postives = 177/188 (94.15%), Query Frame = 0
BLAST of Sed0000319 vs. NCBI nr
Match: XP_004136605.1 (protein PLANT CADMIUM RESISTANCE 10 [Cucumis sativus]) HSP 1 Score: 373.6 bits (958), Expect = 9.9e-100 Identity = 168/188 (89.36%), Postives = 177/188 (94.15%), Query Frame = 0
BLAST of Sed0000319 vs. NCBI nr
Match: XP_022971620.1 (protein PLANT CADMIUM RESISTANCE 10-like [Cucurbita maxima]) HSP 1 Score: 371.7 bits (953), Expect = 3.8e-99 Identity = 174/190 (91.58%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy Swiss-Prot
Match: Q8S8T8 (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana OX=3702 GN=PCR10 PE=2 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 3.0e-67 Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy Swiss-Prot
Match: B4FF80 (Cell number regulator 5 OS=Zea mays OX=4577 GN=CNR5 PE=2 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.5e-61 Identity = 111/185 (60.00%), Postives = 130/185 (70.27%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy Swiss-Prot
Match: Q9LS43 (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.2e-20 Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-18 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy Swiss-Prot
Match: Q9LS44 (Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana OX=3702 GN=PCR4 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.4e-18 Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy TrEMBL
Match: A0A1S3B7G5 (protein PLANT CADMIUM RESISTANCE 10 OS=Cucumis melo OX=3656 GN=LOC103486838 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 1.9e-101 Identity = 170/188 (90.43%), Postives = 179/188 (95.21%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy TrEMBL
Match: A0A0A0LH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815450 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 4.8e-100 Identity = 168/188 (89.36%), Postives = 177/188 (94.15%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy TrEMBL
Match: A0A6J1I689 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita maxima OX=3661 GN=LOC111470294 PE=4 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99 Identity = 174/190 (91.58%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy TrEMBL
Match: A0A6J1GI45 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111454399 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.1e-99 Identity = 174/190 (91.58%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of Sed0000319 vs. ExPASy TrEMBL
Match: A0A6J1F1V0 (protein PLANT CADMIUM RESISTANCE 10-like OS=Cucurbita moschata OX=3662 GN=LOC111441625 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 2.7e-95 Identity = 163/189 (86.24%), Postives = 172/189 (91.01%), Query Frame = 0
BLAST of Sed0000319 vs. TAIR 10
Match: AT2G40935.1 (PLAC8 family protein ) HSP 1 Score: 256.1 bits (653), Expect = 2.1e-68 Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 0
BLAST of Sed0000319 vs. TAIR 10
Match: AT2G40935.3 (PLAC8 family protein ) HSP 1 Score: 226.1 bits (575), Expect = 2.4e-59 Identity = 107/186 (57.53%), Postives = 128/186 (68.82%), Query Frame = 0
BLAST of Sed0000319 vs. TAIR 10
Match: AT2G40935.2 (PLAC8 family protein ) HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51 Identity = 86/126 (68.25%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of Sed0000319 vs. TAIR 10
Match: AT3G18470.1 (PLAC8 family protein ) HSP 1 Score: 99.0 bits (245), Expect = 4.4e-21 Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 0
BLAST of Sed0000319 vs. TAIR 10
Match: AT3G18460.1 (PLAC8 family protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19 Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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