Sed0000315 (gene) Chayote v1

Overview


Name	Sed0000315
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Zinc finger BED domain-containing protein DAYSLEEPER-like
Location	LG10: 8717770 .. 8719553 (+)
RNA-Seq Expression	Sed0000315
Synteny	Sed0000315

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACAAGAATGATTGCTAAGTTCGAAAAATATTGGAGCGTGATTCATGATGTATTGGCAATAACAACAATTTTAGATCCTAGGTTTAAGATGAGATTGATTGAATTTTATTTCCCTCAAATCTATAGATCTCATTCTACTGTTGAAGTGCAACGTGTTAAAGATCTGTGCAAAGAATTGATTAATTATTATAAGTCAAGTTCAATTACAGAGGAAGACATTTCATGTTCTTCAAAGGAGGTGGATAGTTCTAGTCCTAGACTTAGTCCAAAGAAAGATCGATTTCTTAAGTTTGATGAGTTTGTAAATAATGTTGCAAGTGTTGTCAATGTAAAATCAGATTTAGATCTTTATTTAGAGGAAAGTCTTCTACCACGAACTGATAACTTTGACATTTTGTCTTGGTGGAGGTCAAATGGGGTAAAGTATCCTACTTTGTACGAAATTGCCAAAGATATTTTAGAAGTTCCAGTTACTACGGTTGCTTCAGAGTCAACATTTAGTATTGGTGGTAGGCATGTAGGACCACATCGATCTCAAATTCATGGTAACTTATTGGAAGCTTTGATGTGTACTCAAGATTGGTTATGGACAGAAGGTATGAATAACATTTGTTTTTCATTGTTATTGTTATTAAAGAAGTTTTTTTTATAAATTAGTTAAACTAAGAAGTTTTATTTTGTACTTGTATTCAATAGACAAATCTACTCCCATAGATGCCGAAGTGTTGGAGACTATTCTCCATGATCAAGATTCCGATGATGAGGTAAGTAGTTTCTATTAGGTTTGTTTTTTCTAGCTACTTTTTTATTATTTGTTTATGATAATATTTTTCCATCTATTTTTTCTAGCAAATATGTGATACAAACATCGATGATTATTGAAGAATGTATGCATAAGGTAGGTTGAAAATTGTGCTTAATGTTATGAATTTTTGAAGAAATTTATTGAACTCTCTTATTGAAATGAGAATCCTCTACAAAATTAGACTTTTTCTCTCCATAGTTCTTATCTCCACTCTCTCTATGTTAACTAATATGTATAATATGTGTGTGTGGTGAAATGATTTTCAGGTAATTGGTCCAGTTGAATAAGAATAGCTCATGAGGCATGAATATAAGCAAATGTAAAGAAAGATTTACTTTGTAATGGATTGAGTTTGCATTTTGTAAGGAAAACTCTACTTTCACATTTTGGAAGAATATTTGACTTTGCATTTTGCAATGAATGTTGATGATGGACATTTGTGAATCCATAGTTTGTGAAAATTTGTAAATGTAGTGAATTTGTAAAGAAAGCTTTATTTTGTAATAGATTGCGGATGAGATTGCATTGTTTTGTAAAGAAAGCTTCACTTTGTATTGTAATCACATTTTGGAAGAATATTTTGACTTTGCAAGTTGTTGAAAATTTATTAATTTTGACTTTGCACTTTGCAGGTCGTTGAAAATTAATTTATTTTGACTTTTAAGGTTGTTAAAAATTTATTTGTTAAAGCTGTAGATTGATATTATGTTTATGGAACTCTTTATAAAAAAAAATACTTATACGTAGGGCAGGATAAAAAAAAATGTGAAAAAATACAAATTTTGAAAAAAAAATTTAATGGGGAAAAATTCCCCGCGGGGAACCCGATCCCCGCTAATTCCCTATGGGGAATCCCCACCCCGATCCCTGCAAACAAAACGGTGAATTTCGCGGGGACGGGGTCCAATTTTGGTCGCGAGGACAGGAACGGGGAAGGCATTCCCAGGCCCTGCCCCACCTCGATCCATCTCTAA

mRNA sequence

ATGGCCACAAGAATGATTGCTAAGTTCGAAAAATATTGGAGCGTGATTCATGATGTATTGGCAATAACAACAATTTTAGATCCTAGGTTTAAGATGAGATTGATTGAATTTTATTTCCCTCAAATCTATAGATCTCATTCTACTGTTGAAGTGCAACGTGTTAAAGATCTGTGCAAAGAATTGATTAATTATTATAAGTCAAGTTCAATTACAGAGGAAGACATTTCATGTTCTTCAAAGGAGGTGGATAGTTCTAGTCCTAGACTTAACAAATCTACTCCCATAGATGCCGAAGTGTTGGAGACTATTCTCCATGATCAAGATTCCGATGATGAGGACAGGAACGGGGAAGGCATTCCCAGGCCCTGCCCCACCTCGATCCATCTCTAA

Coding sequence (CDS)

ATGGCCACAAGAATGATTGCTAAGTTCGAAAAATATTGGAGCGTGATTCATGATGTATTGGCAATAACAACAATTTTAGATCCTAGGTTTAAGATGAGATTGATTGAATTTTATTTCCCTCAAATCTATAGATCTCATTCTACTGTTGAAGTGCAACGTGTTAAAGATCTGTGCAAAGAATTGATTAATTATTATAAGTCAAGTTCAATTACAGAGGAAGACATTTCATGTTCTTCAAAGGAGGTGGATAGTTCTAGTCCTAGACTTAACAAATCTACTCCCATAGATGCCGAAGTGTTGGAGACTATTCTCCATGATCAAGATTCCGATGATGAGGACAGGAACGGGGAAGGCATTCCCAGGCCCTGCCCCACCTCGATCCATCTCTAA

Protein sequence

MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKSSSITEEDISCSSKEVDSSSPRLNKSTPIDAEVLETILHDQDSDDEDRNGEGIPRPCPTSIHL

Homology

[Close]

BLAST of Sed0000315 vs. NCBI nr
Match: KGN44253.1 (hypothetical protein Csa_016011 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 6.0e-24
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 8   KFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKS 67
           ++EKYWSVIH VLAI T+LDPRFKMRLIEFYF QIY SH  VE++RV++LC +L+  Y S
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYGSHYIVEIERVRELCCDLMKVYSS 65

Query: 68  -SSITEE--DISCSSKEVDSSSPR---LNKSTPIDAEVLETILHDQDSDDED 114
            SSI EE    S S+ + D SS +    NK TP+DA+VLE + HDQD DD++
Sbjct: 66  KSSIIEEPPSTSYSTSKRDGSSSKTSLANKHTPMDAKVLENVFHDQDIDDDE 117

[Close]

BLAST of Sed0000315 vs. NCBI nr
Match: XP_038884881.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida])

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-21
Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           MA+RMIAKFEKYWSVIH VLAI T+LDPRFKMRLI+FYFPQIY  H TVE++RV+DLC +
Sbjct: 196 MASRMIAKFEKYWSVIHGVLAIATVLDPRFKMRLIQFYFPQIYGFHHTVEIKRVRDLCCD 255

Query: 61  LINYYKSSSITEED 75
           L+ +Y S+S T E+
Sbjct: 256 LMKFYSSNSRTIEE 269

[Close]

BLAST of Sed0000315 vs. NCBI nr
Match: TYK23151.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 9.0e-20
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
          MA+RMI+KFEKYWSVIH  LAI T LDP+FKMRLIEFYFPQIY SH   E++RV++LC +
Sbjct: 1  MASRMISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIYESHYVAEIKRVRELCCD 60

Query: 61 LINYYKSSSITEEDISCSSKEVDSSSPRLNKST 94
          L+ +Y S S T E+   S+    S+S R   S+
Sbjct: 61 LMTFYSSKSRTIEEPQRSTSTPYSTSKRDGSSS 93

[Close]

BLAST of Sed0000315 vs. NCBI nr
Match: XP_023742636.1 (zinc finger BED domain-containing protein RICESLEEPER 2 [Lactuca sativa])

HSP 1 Score: 90.9 bits (224), Expect = 8.7e-15
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 1  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
          MA  MIAKF++YWS+IH VLAI TILDPRFKM+LIE+YFP+IY   S  EV+R++ L  E
Sbjct: 17 MAANMIAKFDQYWSLIHGVLAIATILDPRFKMKLIEYYFPKIYGDVSPQEVERIRKLTYE 76

Query: 61 LINYYKSSSITEEDISCSSKE 82
          L+  YK     E   S ++ E
Sbjct: 77 LVREYKPYDAKETQSSLNNSE 97

[Close]

BLAST of Sed0000315 vs. NCBI nr
Match: XP_023738785.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Lactuca sativa])

HSP 1 Score: 88.2 bits (217), Expect = 5.7e-14
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           MA  MI KF++YWS IH VLAI TILDPRFKM+LIE+YFP+IY   S  EV+R++ L  E
Sbjct: 158 MAANMIEKFDQYWSFIHGVLAIATILDPRFKMKLIEYYFPKIYGDVSPQEVERIRKLTYE 217

Query: 61  LINYYKSSSITEEDISCSSKE 82
           L+  YK     E   S ++ E
Sbjct: 218 LVREYKPYDAKETQSSLNNSE 238

[Close]

BLAST of Sed0000315 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           +A  M  +F+KYW   + VLAI  ++DPRFKM+L+EF + +IY   +   V+ V D   E
Sbjct: 496 IAKDMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHE 555

Query: 61  LINYY 66
           L N Y
Sbjct: 556 LYNEY 560

[Close]

BLAST of Sed0000315 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.1e-07
Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           +A  M  +F+KYW   + VLAI  ++DPRFKM+L+EF + +IY   +   V+ V D   E
Sbjct: 496 IAKDMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHE 555

Query: 61  LINYY 66
           L   Y
Sbjct: 556 LYKEY 560

[Close]

BLAST of Sed0000315 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 28/69 (40.58%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           MA  M  KFEKYW V +  LA+   LDPR+K  LIEFY  + +     V V     + ++
Sbjct: 558 MAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRK 617

Query: 61  LINYYKSSS 70
           L  +Y S S
Sbjct: 618 LYQFYSSCS 626

[Close]

BLAST of Sed0000315 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 28/69 (40.58%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           MA  M  KFEKYW V +  LA+   LDPR+K  LIEFY  + +     V V     + ++
Sbjct: 527 MAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRK 586

Query: 61  LINYYKSSS 70
           L  +Y S S
Sbjct: 587 LYQFYSSCS 595

[Close]

BLAST of Sed0000315 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05
Identity = 29/97 (29.90%), Postives = 48/97 (49.48%), Query Frame = 0


Query: 5   MIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINY 64
           M  +F+KYW   + VLAI  ++DPRFKM+L+EF + +I+   +   V+ V D   EL + 
Sbjct: 541 MHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSVEAAKYVKVVDDAIHELYSE 600

Query: 65  YKSSSITEEDISCSSKEVDSSSPRLNKSTPIDAEVLE 102
           Y +      D   +      + P  ++    D  + E
Sbjct: 601 YATQGEANRDAHVTDNSAAVTPPNGDELLDFDIYLSE 637

[Close]

BLAST of Sed0000315 vs. ExPASy TrEMBL
Match: A0A0A0K403 (DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.9e-24
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 8   KFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKELINYYKS 67
           ++EKYWSVIH VLAI T+LDPRFKMRLIEFYF QIY SH  VE++RV++LC +L+  Y S
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYGSHYIVEIERVRELCCDLMKVYSS 65

Query: 68  -SSITEE--DISCSSKEVDSSSPR---LNKSTPIDAEVLETILHDQDSDDED 114
            SSI EE    S S+ + D SS +    NK TP+DA+VLE + HDQD DD++
Sbjct: 66  KSSIIEEPPSTSYSTSKRDGSSSKTSLANKHTPMDAKVLENVFHDQDIDDDE 117

[Close]

BLAST of Sed0000315 vs. ExPASy TrEMBL
Match: A0A5D3DHK7 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001630 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 4.4e-20
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 0


Query: 1  MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
          MA+RMI+KFEKYWSVIH  LAI T LDP+FKMRLIEFYFPQIY SH   E++RV++LC +
Sbjct: 1  MASRMISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIYESHYVAEIKRVRELCCD 60

Query: 61 LINYYKSSSITEEDISCSSKEVDSSSPRLNKST 94
          L+ +Y S S T E+   S+    S+S R   S+
Sbjct: 61 LMTFYSSKSRTIEEPQRSTSTPYSTSKRDGSSS 93

[Close]

BLAST of Sed0000315 vs. ExPASy TrEMBL
Match: A0A5C7H408 (DUF4413 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024185 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.0e-14
Identity = 38/74 (51.35%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           MA  M+ KF+KYW VIH +LAI TILDPRFK++LIE+YFP+IY + S   + RV+ +C +
Sbjct: 87  MAANMVGKFDKYWMVIHGLLAIATILDPRFKLKLIEYYFPKIYVNDSEKHIDRVRKMCYD 146

Query: 61  LINYYKSSSITEED 75
           L+N Y+  +   +D
Sbjct: 147 LVNEYQVKNSDWQD 160

[Close]

BLAST of Sed0000315 vs. ExPASy TrEMBL
Match: A0A2N9I292 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46327 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.0e-14
Identity = 39/84 (46.43%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           MA RM+ KF+ YW+VIH V+A+ TILDPR+K+ L+E+YFP IY   +  E+QR++D+C E
Sbjct: 339 MAFRMLEKFDSYWNVIHGVMAVATILDPRYKIELLEYYFPIIYGDQADDEIQRIRDICYE 398

Query: 61  LINYYKSSSITEEDI--SCSSKEV 83
           ++  Y S  + +E    +C+S++V
Sbjct: 399 MLRDYNSERMGKEANRGTCASEDV 422

[Close]

BLAST of Sed0000315 vs. ExPASy TrEMBL
Match: A0A2N9EE68 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS816 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.0e-14
Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           M  RM+ KF+ YW+VIH+++A+ TILDPR+K+ L+E+YFP IY   +  E+QR++D+C E
Sbjct: 470 MTFRMLEKFDSYWNVIHEIMAVATILDPRYKIELLEYYFPIIYGDQADDEIQRIRDICYE 529

Query: 61  LINYYKSSSITEEDI--SCSSKEV-------------DSSSPRLNKSTPIDAEVLETILH 113
           ++  Y S  + +E    +C+S++V              S   +   ST  +   ++ IL 
Sbjct: 530 MLRDYNSGRMGKEANRGTCASEDVVAIDDSLVNFDNFVSQKKKGTSSTKEEDMDIQNILD 589

[Close]

BLAST of Sed0000315 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 50.8 bits (120), Expect = 9.3e-07
Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 1   MATRMIAKFEKYWSVIHDVLAITTILDPRFKMRLIEFYFPQIYRSHSTVEVQRVKDLCKE 60
           +A  M  K +KYW     VLA+  ++DPRFKM+L+EF F +I+   +   ++ V D   E
Sbjct: 491 IAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKNIKTVDDGIHE 550

Query: 61  LINYY 66
           L   Y
Sbjct: 551 LFTEY 555

The following BLAST results are available for this feature:

BLAST of Sed0000315 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44253.1	6.0e-24	58.93	hypothetical protein Csa_016011 [Cucumis sativus]	[more]
XP_038884881.1	1.6e-21	71.62	zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]	[more]
TYK23151.1	9.0e-20	58.06	zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. mak...	[more]
XP_023742636.1	8.7e-15	55.56	zinc finger BED domain-containing protein RICESLEEPER 2 [Lactuca sativa]	[more]
XP_023738785.1	5.7e-14	54.32	zinc finger BED domain-containing protein RICESLEEPER 2-like [Lactuca sativa]	[more]

BLAST of Sed0000315 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9FJG3	1.8e-07	43.08	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q6AVI0	9.1e-07	41.54	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
P08770	1.2e-06	40.58	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	1.2e-06	40.58	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q75HY5	1.0e-05	29.90	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]

BLAST of Sed0000315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K403	2.9e-24	58.93	DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=...	[more]
A0A5D3DHK7	4.4e-20	58.06	Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. m...	[more]
A0A5C7H408	8.0e-14	51.35	DUF4413 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024185 ...	[more]
A0A2N9I292	8.0e-14	46.43	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46327 PE=4 SV=1	[more]
A0A2N9EE68	8.0e-14	36.22	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS816 PE=4 SV=1	[more]

BLAST of Sed0000315 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	9.3e-07	38.46	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025525	hAT-like transposase, RNase-H fold	PFAM	PF14372	DUF4413	coord: 1..65 e-value: 4.1E-17 score: 62.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..129
None	No IPR available	PANTHER	PTHR23272:SF148	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE	coord: 1..104
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 1..104
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000315.1	Sed0000315.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0043039	tRNA aminoacylation
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016874	ligase activity