Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAAACAACCAGCAATCATCGAAATCGAATCAATTTCGTCGAGAGAAAAATTCAGATCGACCATGGAAGCCCTATCTGGAGCATCTTCTTCATCTCCATCAGCAATTGAATTCGTGTTCTTCGATGATTTTGAGTACGAATTCGTTGAAGAAGTCGAACGCCTTTCGAATTGGGAGCTGCTCGATGCTTCAGATGCCGATTTCGAAATGTACGGTAATGGAGGCGACGATGAAGGAGGGGAAAATCGCAGCGTTGACGGCCGAAATCTTGAAGATCTTCGAGAGCGGATGATTTCTCCTGTTGTAGCGGTGCCGGTTTCTGTTGTTGAGGAACGGATCGGCGATCGCTTAGGTATTGATGTTTATTTGCTTCAGAATCAGGAGGAAATCGGCTTCGCGTACGGTTACGACGAGGCGGAGGAGGAGGAAGTCGACGGCGATGTTGACGATGATGGCGACGAGTCCGATCTGGACGACGAACTCGTTCCGTGGTCGGTCAGTGACAAACTCGGACGGCAAAGGATGAGGAAATTAGGTAAAAGAGGATTTACGAAGATGTATAATTCCAAGAGATCGCCGTTTTTGTTCACTAAGGCTGGATGTGTTCGTGGAAAACACGGACTCGGCTTGAAGCACAGTTATTAGATCAAGAACAGCTTCTCTGCTCGATCAAGTGCTTGAAAAAGGTAACCGAATCTAGTTCCAATTTGGCTTAATTAGAAGTAAATAAATGTAAGACAAAGCAAAATTAGTAGTTGCGTTTATTGTAAGTAGAAGTAACTCGTTAATCTGTAAATCGAATTTGCTGGATTGGTTTCTGTAGATTCTCAAGGCTCGGATGGATTAACATGAACACTAACTCGTTTATGATCATCTTTTGTTGATTAATCATCAATTTGTGTCCACAAAATTGATATGGATATGCTTTGTTGGTTAGCTGTTTGGTTGTTTTGTTTGTGGTTCATGTAATTTGTATAAGAAAATCTGGAATTTGGGCCACACCATCTGAATGATTGACACTTATTTGTATCACTTGTCGAGATTTTTCTAAGTGAAAGCCAAGCGTCCAGTCTAAACTTTTCTTTGTTTTTTATTTCTTGTTTTTTAGTTCAGCTTCAAGAACACATTAGAAACTTTTTGGATTTGTGTTTTTATTCTCACCTTGGCAGAGAACTTCAAAAACTTAAAAACATTGTATAAGATGTGATGGTAGATCATTTAATTCTTTGTGATTAGTTCAGATTAGCTCAATTGTCTGAATCTACTACTCCTTAATATTGTTGTATTAAAAAAAAAGGAACCCTTTGTGATTAAGGACTTAGGGGAGAAAATATATTAAGTATATATATTAAAGTCTTATAGATTAAAT
mRNA sequence
AAGAAAAACAACCAGCAATCATCGAAATCGAATCAATTTCGTCGAGAGAAAAATTCAGATCGACCATGGAAGCCCTATCTGGAGCATCTTCTTCATCTCCATCAGCAATTGAATTCGTGTTCTTCGATGATTTTGAGTACGAATTCGTTGAAGAAGTCGAACGCCTTTCGAATTGGGAGCTGCTCGATGCTTCAGATGCCGATTTCGAAATGTACGGTAATGGAGGCGACGATGAAGGAGGGGAAAATCGCAGCGTTGACGGCCGAAATCTTGAAGATCTTCGAGAGCGGATGATTTCTCCTGTTGTAGCGGTGCCGGTTTCTGTTGTTGAGGAACGGATCGGCGATCGCTTAGGTATTGATGTTTATTTGCTTCAGAATCAGGAGGAAATCGGCTTCGCGTACGGTTACGACGAGGCGGAGGAGGAGGAAGTCGACGGCGATGTTGACGATGATGGCGACGAGTCCGATCTGGACGACGAACTCGTTCCGTGGTCGGTCAGTGACAAACTCGGACGGCAAAGGATGAGGAAATTAGGTAAAAGAGGATTTACGAAGATGTATAATTCCAAGAGATCGCCGTTTTTGTTCACTAAGGCTGGATGTGTTCGTGGAAAACACGGACTCGGCTTGAAGCACAGTTATTAGATCAAGAACAGCTTCTCTGCTCGATCAAGTGCTTGAAAAAGGTAACCGAATCTAGTTCCAATTTGGCTTAATTAGAAGTAAATAAATGTAAGACAAAGCAAAATTAGTAGTTGCGTTTATTGTAAGTAGAAGTAACTCGTTAATCTGTAAATCGAATTTGCTGGATTGGTTTCTGTAGATTCTCAAGGCTCGGATGGATTAACATGAACACTAACTCGTTTATGATCATCTTTTGTTGATTAATCATCAATTTGTGTCCACAAAATTGATATGGATATGCTTTGTTGGTTAGCTGTTTGGTTGTTTTGTTTGTGGTTCATGTAATTTGTATAAGAAAATCTGGAATTTGGGCCACACCATCTGAATGATTGACACTTATTTGTATCACTTGTCGAGATTTTTCTAAGTGAAAGCCAAGCGTCCAGTCTAAACTTTTCTTTGTTTTTTATTTCTTGTTTTTTAGTTCAGCTTCAAGAACACATTAGAAACTTTTTGGATTTGTGTTTTTATTCTCACCTTGGCAGAGAACTTCAAAAACTTAAAAACATTGTATAAGATGTGATGGTAGATCATTTAATTCTTTGTGATTAGTTCAGATTAGCTCAATTGTCTGAATCTACTACTCCTTAATATTGTTGTATTAAAAAAAAAGGAACCCTTTGTGATTAAGGACTTAGGGGAGAAAATATATTAAGTATATATATTAAAGTCTTATAGATTAAAT
Coding sequence (CDS)
ATGGAAGCCCTATCTGGAGCATCTTCTTCATCTCCATCAGCAATTGAATTCGTGTTCTTCGATGATTTTGAGTACGAATTCGTTGAAGAAGTCGAACGCCTTTCGAATTGGGAGCTGCTCGATGCTTCAGATGCCGATTTCGAAATGTACGGTAATGGAGGCGACGATGAAGGAGGGGAAAATCGCAGCGTTGACGGCCGAAATCTTGAAGATCTTCGAGAGCGGATGATTTCTCCTGTTGTAGCGGTGCCGGTTTCTGTTGTTGAGGAACGGATCGGCGATCGCTTAGGTATTGATGTTTATTTGCTTCAGAATCAGGAGGAAATCGGCTTCGCGTACGGTTACGACGAGGCGGAGGAGGAGGAAGTCGACGGCGATGTTGACGATGATGGCGACGAGTCCGATCTGGACGACGAACTCGTTCCGTGGTCGGTCAGTGACAAACTCGGACGGCAAAGGATGAGGAAATTAGGTAAAAGAGGATTTACGAAGATGTATAATTCCAAGAGATCGCCGTTTTTGTTCACTAAGGCTGGATGTGTTCGTGGAAAACACGGACTCGGCTTGAAGCACAGTTATTAG
Protein sequence
MEALSGASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGGDDEGGENRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDEAEEEEVDGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKAGCVRGKHGLGLKHSY
Homology
BLAST of Sed0000236 vs. NCBI nr
Match:
XP_011658549.2 (uncharacterized protein LOC101212092 [Cucumis sativus] >KAE8645645.1 hypothetical protein Csa_020485 [Cucumis sativus])
HSP 1 Score: 271.6 bits (693), Expect = 5.4e-69
Identity = 147/193 (76.17%), Postives = 166/193 (86.01%), Query Frame = 0
Query: 1 MEALSGASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGGDDEGGE 60
MEA+SG+SSSS S++EFVF+DDFEYEFVE++ERLSNWELLDA DAD EM GNGG+++GG
Sbjct: 37 MEAISGSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGG- 96
Query: 61 NRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDEAEE 120
N SVD +DLRE MISPV+AVP+S+VE+RI L D Y L NQ E GFAYGY++AEE
Sbjct: 97 NCSVDDNVSQDLRE-MISPVLAVPISLVEDRIDCSLE-DAYFLHNQAEDGFAYGYNDAEE 156
Query: 121 EEVDGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKAGC 180
E+ +VDDD DE DLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK GC
Sbjct: 157 ED---EVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGC 216
Query: 181 VRGKHGLGLKHSY 194
VRGKHGLGLKHSY
Sbjct: 217 VRGKHGLGLKHSY 223
BLAST of Sed0000236 vs. NCBI nr
Match:
XP_023553634.1 (histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 147/199 (73.87%), Postives = 163/199 (81.91%), Query Frame = 0
Query: 1 MEALSGASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGGDDEGGE 60
MEA+SGASSSS S++EF F+DDFEYEFVE+VERLSNWE L+ASDAD EM GNGG+ E G+
Sbjct: 1 MEAMSGASSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKE-GK 60
Query: 61 NRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDEAEE 120
N V R EDLRE +ISPVV VP+S+ E+RI D L DVY LQN E GFAYGY++AEE
Sbjct: 61 NCCVVARIPEDLRE-IISPVVVVPISLAEDRIFDPLE-DVYFLQNHAEDGFAYGYNDAEE 120
Query: 121 EEV------DGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFL 180
+E D D DDD DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFL
Sbjct: 121 DEPDKDDDDDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFL 180
Query: 181 FTKAGCVRGKHGLGLKHSY 194
FTK GCVRGKHGLGLKHSY
Sbjct: 181 FTKPGCVRGKHGLGLKHSY 196
BLAST of Sed0000236 vs. NCBI nr
Match:
XP_022969470.1 (uncharacterized protein LOC111468462 [Cucurbita maxima])
HSP 1 Score: 261.5 bits (667), Expect = 5.6e-66
Identity = 148/199 (74.37%), Postives = 163/199 (81.91%), Query Frame = 0
Query: 1 MEALSGA---SSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGGDDE 60
MEA+SGA SSSS S++EF F+DDFEYEFVE+VERLSNWE L+ASDAD EM GNGG+ E
Sbjct: 1 MEAMSGASSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKE 60
Query: 61 GGENRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDE 120
G+N V R EDL E MISPVV VP+S+ E+RI D L DVY LQN E GFAYGY++
Sbjct: 61 -GKNCCVVARIPEDLLE-MISPVVVVPISLAEDRIFDPLE-DVYFLQNHAEDGFAYGYND 120
Query: 121 AEEEEV---DGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFL 180
AEE+E DGD DDD DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFL
Sbjct: 121 AEEDETDKDDGDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFL 180
Query: 181 FTKAGCVRGKHGLGLKHSY 194
FTK GCVRGKHGLGLKHSY
Sbjct: 181 FTKPGCVRGKHGLGLKHSY 196
BLAST of Sed0000236 vs. NCBI nr
Match:
KAA0033784.1 (nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa] >TYK22350.1 nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa])
HSP 1 Score: 260.8 bits (665), Expect = 9.5e-66
Identity = 147/194 (75.77%), Postives = 164/194 (84.54%), Query Frame = 0
Query: 1 MEALSGASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGGDDEGGE 60
MEA+SG+SSS S++EFVF+DDFEYEFVE++ERLSNWELLDA DAD EM GNGG+++ GE
Sbjct: 1 MEAVSGSSSS--SSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQ-GE 60
Query: 61 NRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDEAEE 120
N SVD +DLRE MISPV+AVP+S+VE+RI L D L NQ E GFAYGYD+AEE
Sbjct: 61 NYSVDDNVSQDLRE-MISPVLAVPISLVEDRIDGSLE-DACFLHNQAEDGFAYGYDDAEE 120
Query: 121 E-EVDGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKAG 180
E EVD DD+ DE DLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK G
Sbjct: 121 EDEVD---DDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPG 180
Query: 181 CVRGKHGLGLKHSY 194
CVRGKHGLGLKHSY
Sbjct: 181 CVRGKHGLGLKHSY 186
BLAST of Sed0000236 vs. NCBI nr
Match:
XP_008448068.1 (PREDICTED: uncharacterized protein LOC103490356 [Cucumis melo])
HSP 1 Score: 258.8 bits (660), Expect = 3.6e-65
Identity = 147/200 (73.50%), Postives = 165/200 (82.50%), Query Frame = 0
Query: 1 MEALSG------ASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGG 60
MEA+SG +SSSS S++EFVF+DDFEYEFVE++ERLSNWELLDA DAD EM GNGG
Sbjct: 1 MEAVSGSSSSSSSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG 60
Query: 61 DDEGGENRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYG 120
+++ GEN SVD +DLRE MISPV+AVP+S+VE+RI L D L NQ E GFAYG
Sbjct: 61 EEQ-GENYSVDDNVSQDLRE-MISPVLAVPISLVEDRIDGSLE-DACFLHNQAEDGFAYG 120
Query: 121 YDEAEEE-EVDGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPF 180
YD+AEEE EVD D++ DE DLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPF
Sbjct: 121 YDDAEEEDEVD---DEEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPF 180
Query: 181 LFTKAGCVRGKHGLGLKHSY 194
LFTK GCVRGKHGLGLKHSY
Sbjct: 181 LFTKPGCVRGKHGLGLKHSY 194
BLAST of Sed0000236 vs. ExPASy TrEMBL
Match:
A0A0A0K4F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004150 PE=4 SV=1)
HSP 1 Score: 271.6 bits (693), Expect = 2.6e-69
Identity = 147/193 (76.17%), Postives = 166/193 (86.01%), Query Frame = 0
Query: 1 MEALSGASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGGDDEGGE 60
MEA+SG+SSSS S++EFVF+DDFEYEFVE++ERLSNWELLDA DAD EM GNGG+++GG
Sbjct: 1 MEAISGSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQGG- 60
Query: 61 NRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDEAEE 120
N SVD +DLRE MISPV+AVP+S+VE+RI L D Y L NQ E GFAYGY++AEE
Sbjct: 61 NCSVDDNVSQDLRE-MISPVLAVPISLVEDRIDCSLE-DAYFLHNQAEDGFAYGYNDAEE 120
Query: 121 EEVDGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKAGC 180
E+ +VDDD DE DLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK GC
Sbjct: 121 ED---EVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGC 180
Query: 181 VRGKHGLGLKHSY 194
VRGKHGLGLKHSY
Sbjct: 181 VRGKHGLGLKHSY 187
BLAST of Sed0000236 vs. ExPASy TrEMBL
Match:
A0A6J1I004 (uncharacterized protein LOC111468462 OS=Cucurbita maxima OX=3661 GN=LOC111468462 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 2.7e-66
Identity = 148/199 (74.37%), Postives = 163/199 (81.91%), Query Frame = 0
Query: 1 MEALSGA---SSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGGDDE 60
MEA+SGA SSSS S++EF F+DDFEYEFVE+VERLSNWE L+ASDAD EM GNGG+ E
Sbjct: 1 MEAMSGASSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKE 60
Query: 61 GGENRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDE 120
G+N V R EDL E MISPVV VP+S+ E+RI D L DVY LQN E GFAYGY++
Sbjct: 61 -GKNCCVVARIPEDLLE-MISPVVVVPISLAEDRIFDPLE-DVYFLQNHAEDGFAYGYND 120
Query: 121 AEEEEV---DGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFL 180
AEE+E DGD DDD DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFL
Sbjct: 121 AEEDETDKDDGDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFL 180
Query: 181 FTKAGCVRGKHGLGLKHSY 194
FTK GCVRGKHGLGLKHSY
Sbjct: 181 FTKPGCVRGKHGLGLKHSY 196
BLAST of Sed0000236 vs. ExPASy TrEMBL
Match:
A0A5A7SRG7 (Nuclear polyadenylated RNA-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00680 PE=4 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 4.6e-66
Identity = 147/194 (75.77%), Postives = 164/194 (84.54%), Query Frame = 0
Query: 1 MEALSGASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGGDDEGGE 60
MEA+SG+SSS S++EFVF+DDFEYEFVE++ERLSNWELLDA DAD EM GNGG+++ GE
Sbjct: 1 MEAVSGSSSS--SSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGGEEQ-GE 60
Query: 61 NRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDEAEE 120
N SVD +DLRE MISPV+AVP+S+VE+RI L D L NQ E GFAYGYD+AEE
Sbjct: 61 NYSVDDNVSQDLRE-MISPVLAVPISLVEDRIDGSLE-DACFLHNQAEDGFAYGYDDAEE 120
Query: 121 E-EVDGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKAG 180
E EVD DD+ DE DLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTK G
Sbjct: 121 EDEVD---DDEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPG 180
Query: 181 CVRGKHGLGLKHSY 194
CVRGKHGLGLKHSY
Sbjct: 181 CVRGKHGLGLKHSY 186
BLAST of Sed0000236 vs. ExPASy TrEMBL
Match:
A0A1S3BJG2 (uncharacterized protein LOC103490356 OS=Cucumis melo OX=3656 GN=LOC103490356 PE=4 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 1.8e-65
Identity = 147/200 (73.50%), Postives = 165/200 (82.50%), Query Frame = 0
Query: 1 MEALSG------ASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGG 60
MEA+SG +SSSS S++EFVF+DDFEYEFVE++ERLSNWELLDA DAD EM GNGG
Sbjct: 1 MEAVSGSSSSSSSSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNGG 60
Query: 61 DDEGGENRSVDGRNLEDLRERMISPVVAVPVSVVEERIGDRLGIDVYLLQNQEEIGFAYG 120
+++ GEN SVD +DLRE MISPV+AVP+S+VE+RI L D L NQ E GFAYG
Sbjct: 61 EEQ-GENYSVDDNVSQDLRE-MISPVLAVPISLVEDRIDGSLE-DACFLHNQAEDGFAYG 120
Query: 121 YDEAEEE-EVDGDVDDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPF 180
YD+AEEE EVD D++ DE DLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPF
Sbjct: 121 YDDAEEEDEVD---DEEEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPF 180
Query: 181 LFTKAGCVRGKHGLGLKHSY 194
LFTK GCVRGKHGLGLKHSY
Sbjct: 181 LFTKPGCVRGKHGLGLKHSY 194
BLAST of Sed0000236 vs. ExPASy TrEMBL
Match:
A0A6J1F1D0 (NAD-dependent protein deacetylase HST1-like OS=Cucurbita moschata OX=3662 GN=LOC111441242 PE=4 SV=1)
HSP 1 Score: 250.8 bits (639), Expect = 4.8e-63
Identity = 147/203 (72.41%), Postives = 163/203 (80.30%), Query Frame = 0
Query: 1 MEALSGASSSSPSAIEFVFFDDFEYEFVEEVERLSNWELLDASDADFEMYGNGG------ 60
MEA SGA+SSS S++EFVF DD EYEFVEEVERLSNWELLDASDADFE+ GNG
Sbjct: 1 MEAPSGAASSSSSSVEFVFHDDLEYEFVEEVERLSNWELLDASDADFEIDGNGDEQEEEE 60
Query: 61 -DDEGGENRSVDGRNLEDLRERMISPVVAVPV-SVVEERIGDRLGIDVYLLQNQEEIGFA 120
++E GE+ SVD R +DLR + VVA+P+ S+VEERI D DVYLLQNQ E GFA
Sbjct: 61 EEEEEGESCSVDVRVPKDLRGKR---VVAMPISSLVEERI-DGPFDDVYLLQNQVENGFA 120
Query: 121 YGYDEAEEEEVDGDV---DDDGDESDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSK 180
YG ++ EE+E D DV DDDGDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSK
Sbjct: 121 YGCNDLEEDESDDDVVDDDDDGDECDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSK 180
Query: 181 RSPFLFTKAGCVRGKHGLGLKHS 193
RSPFLFTK GCVRGKHGLGLKHS
Sbjct: 181 RSPFLFTKPGCVRGKHGLGLKHS 199
BLAST of Sed0000236 vs. TAIR 10
Match:
AT4G34630.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )
HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15
Identity = 71/196 (36.22%), Postives = 101/196 (51.53%), Query Frame = 0
Query: 29 EEVERLSNWELLDASDADFEMYGNGGDDEGGENRSVDGRNLEDL----RERMISP-VVAV 88
+EV+ L WE+++ SD +F ++ SVD + +D+ ++P V++
Sbjct: 17 QEVD-LDLWEVVNPSDGEF----------SDDSFSVDSLSDDDVISLDDASFVAPSVISP 76
Query: 89 PVSVVEERIGDRLGIDVYLLQNQEEIGFAYGYDEAEEEEVD------------------- 148
P ++ G L +D L +++G DE +E ++
Sbjct: 77 PHEIIPIADGGDLAVD---LDGDDDVGDDVVRDEVDENDLGWSQQRMMFLGGGSGYSVGI 136
Query: 149 --GD-VDDDGDES-------DLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFL 191
GD V+DDG+E DLD+ELVP SVS K+GRQRMRKLGKR K+Y SK SPFL
Sbjct: 137 TYGDSVNDDGEEDREYDDSYDLDEELVPRSVSKKVGRQRMRKLGKRAIAKVYASKISPFL 196
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_011658549.2 | 5.4e-69 | 76.17 | uncharacterized protein LOC101212092 [Cucumis sativus] >KAE8645645.1 hypothetica... | [more] |
| XP_023553634.1 | 1.5e-66 | 73.87 | histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_022969470.1 | 5.6e-66 | 74.37 | uncharacterized protein LOC111468462 [Cucurbita maxima] | [more] |
| KAA0033784.1 | 9.5e-66 | 75.77 | nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa] >TY... | [more] |
| XP_008448068.1 | 3.6e-65 | 73.50 | PREDICTED: uncharacterized protein LOC103490356 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K4F3 | 2.6e-69 | 76.17 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004150 PE=4 SV=1 | [more] |
| A0A6J1I004 | 2.7e-66 | 74.37 | uncharacterized protein LOC111468462 OS=Cucurbita maxima OX=3661 GN=LOC111468462... | [more] |
| A0A5A7SRG7 | 4.6e-66 | 75.77 | Nuclear polyadenylated RNA-binding protein 3-like OS=Cucumis melo var. makuwa OX... | [more] |
| A0A1S3BJG2 | 1.8e-65 | 73.50 | uncharacterized protein LOC103490356 OS=Cucumis melo OX=3656 GN=LOC103490356 PE=... | [more] |
| A0A6J1F1D0 | 4.8e-63 | 72.41 | NAD-dependent protein deacetylase HST1-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G34630.1 | 2.1e-15 | 36.22 | unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac... | [more] |
