Sed0000228 (gene) Chayote v1

Overview


Name	Sed0000228
Type	gene
Organism	Sechium edule (Chayote v1)
Description	AT-rich interactive domain protein
Location	LG08: 2109112 .. 2111001 (-)
RNA-Seq Expression	Sed0000228
Synteny	Sed0000228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACTATCTTAAAAATCTCAATATCCCTCTCCTTATCCGCTCGTAAAACCTTCCTCTCCATTTCTCAGACTCTGAGCTCACTCTCCTCCACTCAAATGGCTCTGACCATAACCACCGCCAGAGCCGCCGCCGGCGGTGGAATCCTCCACCAAATCACCACCAGAAATCCTCCTAACCAACTCCTCCTCCGCCGCAGCGCGTTCTCTCCGCCGTCCAACGAAGCCCGCACCGCCCTCCACATCGTTCAGGCCAAGAAATCCTCATCTCGAACCGGCCGATTCGACGGTAAGAACCGACGGAGCTCGGCGACGACGACTAAGGAACAGAAAGAAGAACAGGAACTAGAAGAAGAAGATCGGAATCGGGCGGCGGGATTTGAAAGAGACGGTCCGATCGTTGATAGCGGCGGCGTAGCGTTTGATGTGGAGGCGAATATGCCGGAGTTGCCTGGCCTTCAGCCGGATTTCTGGGAGGGCTCGCAGTGGGATCCGTTCGGCTTCTTCCTCGAATACTTGTGGGCTTTTGGCATCGCTTTTGCGGTACACTGCTTTTCCCCCTTTCTTCAATTTTGTTTTTCCACTAATTGTTATGAATAATTGGAACAACAATCAAAGAATATGAGAAAAATGCTAGACAAAGAACACGACTATTTACGCGGTTTGCTAATGTTATGTTCGTTACGTGGAGGTAATTGACACAATAGCGAGATCTTCGACTAAGTAATTGTAGCTCAACATAATTCAAGGCATTTCAACCGTCCCTAATAATTTATGTTATGAAAACGGCAATCAACAATTGATCGAAGAATAAAGAAACGTGGGAGAAGAAGAATAAACACACATAAATTTACGTGGTTCACGTAGTGTTAGCTAGTCCATGGGCGGGGGGACAACAATTTGATTAAGGAGAGGCGAATTGCAGAGTTACAGAATGAACGTCATAATACGGCTAGGGCTTAATTCGAGTTTATACATACACTCTCATTAAACCCTAAATGCGTAAGCATTAACCAGACCCGGCTCGCTGACCGGTGAGCGAGACCCCCCGACTACTAATCGCAGGGCATTGGTGCGTTCATGGCATATCTCAACAATTTCCAATCATTATTTTGATTGATTCTGCTGTCTGTTTAAATCAAAGTTAGGATTTAGCAGAAGATTCAGAATTTCAGTTTATATATATATATATTTGTAATTAAGGGATGGCATTTGAGAAAGACTTGGCCAAATTACTGATTTCTAGGAAGATATTAACCAGCATCTTCAGCATTTGGGCGTTTAAATTTCAATCCCTTAGTTCTTATTCGTTTGTTTGACATATACAGAACAGAACTATGATCTTTAACATTATTTAGATGTTTTCTTTTGGGGGGACTTTCTAGAATAAAGGGTAGTACATTAGTCTAGTTCTGTTTCTTTAGTTGATGAATGATATATAACACTAATTCATTCATCATTTTAATAGCTTATTGCTTGTGGGATTGCTGTCACTACATATAACGAAGGAGCAACCGATTTTAAGGACACGCCTGCGTATAAAGAATCGGTTCAAACTCAAGAGATATTAGAAGAACCCGAGGGATCGAGCGCAGATGTCTTTGAATCCAATCCAACTGAGGTGGCTCCTAGTTTGGAATGATCTTGATATTTCGGTATCGAAAAAAGATTACACAACCTGGATAGGTTATCACCCTGGCAAAGTAACATAGGGTACTGTGTGAATTTGTAATGGCATATTTCTCTAGGTATGTTATGACAACTTTGTCTTATTGTATCTAGTCAAGATTTTGATTTTATATGTCTTAGTTTTCTTATTGGTATATTGTTTATTTAGGTCATTTTGATTTCTTTCATTCTATCAATCTGTTATGGCCTTTGTGATGTTGACTTA

mRNA sequence

TAACTATCTTAAAAATCTCAATATCCCTCTCCTTATCCGCTCGTAAAACCTTCCTCTCCATTTCTCAGACTCTGAGCTCACTCTCCTCCACTCAAATGGCTCTGACCATAACCACCGCCAGAGCCGCCGCCGGCGGTGGAATCCTCCACCAAATCACCACCAGAAATCCTCCTAACCAACTCCTCCTCCGCCGCAGCGCGTTCTCTCCGCCGTCCAACGAAGCCCGCACCGCCCTCCACATCGTTCAGGCCAAGAAATCCTCATCTCGAACCGGCCGATTCGACGGTAAGAACCGACGGAGCTCGGCGACGACGACTAAGGAACAGAAAGAAGAACAGGAACTAGAAGAAGAAGATCGGAATCGGGCGGCGGGATTTGAAAGAGACGGTCCGATCGTTGATAGCGGCGGCGTAGCGTTTGATGTGGAGGCGAATATGCCGGAGTTGCCTGGCCTTCAGCCGGATTTCTGGGAGGGCTCGCAGTGGGATCCGTTCGGCTTCTTCCTCGAATACTTGTGGGCTTTTGGCATCGCTTTTGCGCTTATTGCTTGTGGGATTGCTGTCACTACATATAACGAAGGAGCAACCGATTTTAAGGACACGCCTGCGTATAAAGAATCGGTTCAAACTCAAGAGATATTAGAAGAACCCGAGGGATCGAGCGCAGATGTCTTTGAATCCAATCCAACTGAGGTGGCTCCTAGTTTGGAATGATCTTGATATTTCGGTATCGAAAAAAGATTACACAACCTGGATAGGTTATCACCCTGGCAAAGTAACATAGGGTACTGTGTGAATTTGTAATGGCATATTTCTCTAGGTATGTTATGACAACTTTGTCTTATTGTATCTAGTCAAGATTTTGATTTTATATGTCTTAGTTTTCTTATTGGTATATTGTTTATTTAGGTCATTTTGATTTCTTTCATTCTATCAATCTGTTATGGCCTTTGTGATGTTGACTTA

Coding sequence (CDS)

ATGGCTCTGACCATAACCACCGCCAGAGCCGCCGCCGGCGGTGGAATCCTCCACCAAATCACCACCAGAAATCCTCCTAACCAACTCCTCCTCCGCCGCAGCGCGTTCTCTCCGCCGTCCAACGAAGCCCGCACCGCCCTCCACATCGTTCAGGCCAAGAAATCCTCATCTCGAACCGGCCGATTCGACGGTAAGAACCGACGGAGCTCGGCGACGACGACTAAGGAACAGAAAGAAGAACAGGAACTAGAAGAAGAAGATCGGAATCGGGCGGCGGGATTTGAAAGAGACGGTCCGATCGTTGATAGCGGCGGCGTAGCGTTTGATGTGGAGGCGAATATGCCGGAGTTGCCTGGCCTTCAGCCGGATTTCTGGGAGGGCTCGCAGTGGGATCCGTTCGGCTTCTTCCTCGAATACTTGTGGGCTTTTGGCATCGCTTTTGCGCTTATTGCTTGTGGGATTGCTGTCACTACATATAACGAAGGAGCAACCGATTTTAAGGACACGCCTGCGTATAAAGAATCGGTTCAAACTCAAGAGATATTAGAAGAACCCGAGGGATCGAGCGCAGATGTCTTTGAATCCAATCCAACTGAGGTGGCTCCTAGTTTGGAATGA

Protein sequence

MALTITTARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSRTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELPGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEILEEPEGSSADVFESNPTEVAPSLE

Homology

[Close]

BLAST of Sed0000228 vs. NCBI nr
Match: XP_022134616.1 (uncharacterized protein LOC111006843 [Momordica charantia])

HSP 1 Score: 300.1 bits (767), Expect = 1.5e-77
Identity = 162/207 (78.26%), Postives = 178/207 (85.99%), Query Frame = 0


Query: 1   MALTITTARAA--AGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSR 60
           MALTIT   AA  +GGGIL++ +T+ P NQ LLRR+A  PPSNEART LH+VQAKKSS R
Sbjct: 1   MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEART-LHVVQAKKSSFR 60

Query: 61  TGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELP 120
           TGRFD KNRRSS TTTKEQ+E    EEE+RNR A  ERDGP V++ GVAFDV+ N+PELP
Sbjct: 61  TGRFDSKNRRSS-TTTKEQEE----EEEERNRMAEIERDGPNVENAGVAFDVDENLPELP 120

Query: 121 GLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180
           GLQPDFWEG +WDP GFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT
Sbjct: 121 GLQPDFWEGPRWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180

Query: 181 QEILEEPEGSSADVFESNPTEVAPSLE 206
           QE+LEEPE S+ DVFESNPTEVAPSLE
Sbjct: 181 QELLEEPEASNPDVFESNPTEVAPSLE 201

[Close]

BLAST of Sed0000228 vs. NCBI nr
Match: XP_038876354.1 (uncharacterized protein LOC120068690 [Benincasa hispida])

HSP 1 Score: 287.7 bits (735), Expect = 7.7e-74
Identity = 155/207 (74.88%), Postives = 168/207 (81.16%), Query Frame = 0


Query: 1   MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSR 60
           MALTIT   A    GGGIL++ +TR P NQ LLRR+A  PPS EART L++VQAKKSS R
Sbjct: 1   MALTITNGGATGGTGGGILYRSSTRTPSNQFLLRRNALFPPSKEART-LYVVQAKKSSFR 60

Query: 61  TGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELP 120
           TGRFDGKNRRSS TT       QE EEE+RNR A   RD P V++ GVAFDV+ N+PELP
Sbjct: 61  TGRFDGKNRRSSTTT-------QEQEEEERNRTAEILRDSPNVENAGVAFDVDENLPELP 120

Query: 121 GLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180
           GLQPDFWEG QWD  GFFLEYLWAFGI FALIACGIAVTTYNEGATDFKDTPAYKESVQT
Sbjct: 121 GLQPDFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180

Query: 181 QEILEEPEGSSADVFESNPTEVAPSLE 206
           +EILEEPE S+ DVFESNPTEVAPSLE
Sbjct: 181 REILEEPEASNPDVFESNPTEVAPSLE 199

[Close]

BLAST of Sed0000228 vs. NCBI nr
Match: XP_022987248.1 (uncharacterized protein LOC111484859 [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 3.4e-69
Identity = 148/207 (71.50%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 1   MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSR 60
           MALTIT   A    GGGIL++ +TR P NQ L RR+A   PS EART LH+V +KKSS R
Sbjct: 1   MALTITNGGATCGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEART-LHVVHSKKSSFR 60

Query: 61  TGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELP 120
            GR D KNRRSS +T    KE++E EEE+RNR A       I ++ GVAFDV+ N+PELP
Sbjct: 61  IGRIDSKNRRSSTST----KEQEEQEEEERNRMA------EIAENAGVAFDVDENLPELP 120

Query: 121 GLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180
           GLQPDFWEG QWDP GFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQT
Sbjct: 121 GLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQT 180

Query: 181 QEILEEPEGSSADVFESNPTEVAPSLE 206
           QEILEEPE S+ DVFESNPTEVAPSLE
Sbjct: 181 QEILEEPEASNPDVFESNPTEVAPSLE 196

[Close]

BLAST of Sed0000228 vs. NCBI nr
Match: KAG6589553.1 (hypothetical protein SDJN03_14976, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023239.1 hypothetical protein SDJN02_14264 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 4.4e-69
Identity = 150/207 (72.46%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 1   MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSR 60
           MALTIT   A    GGGIL++ +TR P NQ+L RR+A   PS EART LH+V +KKSS R
Sbjct: 1   MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEART-LHVVHSKKSSFR 60

Query: 61  TGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELP 120
            GR D KNRRSS T+TKEQ+E+Q   EE+RNR A       I ++ GVAFDV+ N+PELP
Sbjct: 61  IGRIDSKNRRSS-TSTKEQEEQQ---EEERNRMA------EIAENAGVAFDVDENLPELP 120

Query: 121 GLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180
           GLQPDFWEG QWDP GFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQT
Sbjct: 121 GLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQT 180

Query: 181 QEILEEPEGSSADVFESNPTEVAPSLE 206
           QEILEEPE S+ DVFESNPTEVAPSLE
Sbjct: 181 QEILEEPEASNPDVFESNPTEVAPSLE 196

[Close]

BLAST of Sed0000228 vs. NCBI nr
Match: XP_008453388.1 (PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo] >KAA0041427.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa] >KAA0058066.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa] >TYK28412.1 putative AT-rich interactive domain-containing protein 5A [Cucumis melo var. makuwa])

HSP 1 Score: 270.8 bits (691), Expect = 9.8e-69
Identity = 153/208 (73.56%), Postives = 166/208 (79.81%), Query Frame = 0


Query: 1   MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSS 60
           M LTIT   A AG  GGIL++  TR PP N  L RR+A   PS EART LH+VQAKKSS 
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEART-LHVVQAKKSSF 60

Query: 61  RTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPEL 120
           RTGRFD KNRRSS TT KEQ +E   EEE+RNR AG E   PIV++ GV FDV+ N+PEL
Sbjct: 61  RTGRFDSKNRRSS-TTIKEQDKE---EEEERNRTAGIEMGSPIVENAGVVFDVDENLPEL 120

Query: 121 PGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQ 180
           PGLQPDFWEG QWD  GFFLEYLWAFGI FALIACGIAVTTYNEGATDFK+TPAYKESVQ
Sbjct: 121 PGLQPDFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQ 180

Query: 181 TQEILEEPEGSSADVFESNPTEVAPSLE 206
           T+EIL EPE S+ DVFESNPTEVAPSLE
Sbjct: 181 TREIL-EPEASNPDVFESNPTEVAPSLE 202

[Close]

BLAST of Sed0000228 vs. ExPASy TrEMBL
Match: A0A6J1BYA9 (uncharacterized protein LOC111006843 OS=Momordica charantia OX=3673 GN=LOC111006843 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.3e-78
Identity = 162/207 (78.26%), Postives = 178/207 (85.99%), Query Frame = 0


Query: 1   MALTITTARAA--AGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSR 60
           MALTIT   AA  +GGGIL++ +T+ P NQ LLRR+A  PPSNEART LH+VQAKKSS R
Sbjct: 1   MALTITNGGAAGGSGGGILYRTSTKIPSNQFLLRRNALFPPSNEART-LHVVQAKKSSFR 60

Query: 61  TGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELP 120
           TGRFD KNRRSS TTTKEQ+E    EEE+RNR A  ERDGP V++ GVAFDV+ N+PELP
Sbjct: 61  TGRFDSKNRRSS-TTTKEQEE----EEEERNRMAEIERDGPNVENAGVAFDVDENLPELP 120

Query: 121 GLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180
           GLQPDFWEG +WDP GFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT
Sbjct: 121 GLQPDFWEGPRWDPLGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180

Query: 181 QEILEEPEGSSADVFESNPTEVAPSLE 206
           QE+LEEPE S+ DVFESNPTEVAPSLE
Sbjct: 181 QELLEEPEASNPDVFESNPTEVAPSLE 201

[Close]

BLAST of Sed0000228 vs. ExPASy TrEMBL
Match: A0A6J1JIX0 (uncharacterized protein LOC111484859 OS=Cucurbita maxima OX=3661 GN=LOC111484859 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.6e-69
Identity = 148/207 (71.50%), Postives = 164/207 (79.23%), Query Frame = 0


Query: 1   MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSR 60
           MALTIT   A    GGGIL++ +TR P NQ L RR+A   PS EART LH+V +KKSS R
Sbjct: 1   MALTITNGGATCGTGGGILYRTSTRTPSNQFLFRRNALFSPSKEART-LHVVHSKKSSFR 60

Query: 61  TGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELP 120
            GR D KNRRSS +T    KE++E EEE+RNR A       I ++ GVAFDV+ N+PELP
Sbjct: 61  IGRIDSKNRRSSTST----KEQEEQEEEERNRMA------EIAENAGVAFDVDENLPELP 120

Query: 121 GLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180
           GLQPDFWEG QWDP GFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQT
Sbjct: 121 GLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQT 180

Query: 181 QEILEEPEGSSADVFESNPTEVAPSLE 206
           QEILEEPE S+ DVFESNPTEVAPSLE
Sbjct: 181 QEILEEPEASNPDVFESNPTEVAPSLE 196

[Close]

BLAST of Sed0000228 vs. ExPASy TrEMBL
Match: A0A5A7UV79 (Putative AT-rich interactive domain-containing protein 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00400 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.7e-69
Identity = 153/208 (73.56%), Postives = 166/208 (79.81%), Query Frame = 0


Query: 1   MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSS 60
           M LTIT   A AG  GGIL++  TR PP N  L RR+A   PS EART LH+VQAKKSS 
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEART-LHVVQAKKSSF 60

Query: 61  RTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPEL 120
           RTGRFD KNRRSS TT KEQ +E   EEE+RNR AG E   PIV++ GV FDV+ N+PEL
Sbjct: 61  RTGRFDSKNRRSS-TTIKEQDKE---EEEERNRTAGIEMGSPIVENAGVVFDVDENLPEL 120

Query: 121 PGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQ 180
           PGLQPDFWEG QWD  GFFLEYLWAFGI FALIACGIAVTTYNEGATDFK+TPAYKESVQ
Sbjct: 121 PGLQPDFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQ 180

Query: 181 TQEILEEPEGSSADVFESNPTEVAPSLE 206
           T+EIL EPE S+ DVFESNPTEVAPSLE
Sbjct: 181 TREIL-EPEASNPDVFESNPTEVAPSLE 202

[Close]

BLAST of Sed0000228 vs. ExPASy TrEMBL
Match: A0A1S3BW57 (uncharacterized protein LOC103494120 OS=Cucumis melo OX=3656 GN=LOC103494120 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.7e-69
Identity = 153/208 (73.56%), Postives = 166/208 (79.81%), Query Frame = 0


Query: 1   MALTITTARAAAG--GGILHQITTRNPP-NQLLLRRSAFSPPSNEARTALHIVQAKKSSS 60
           M LTIT   A AG  GGIL++  TR PP N  L RR+A   PS EART LH+VQAKKSS 
Sbjct: 1   MPLTITNGGATAGTTGGILYRTFTRTPPSNYFLFRRNALFHPSKEART-LHVVQAKKSSF 60

Query: 61  RTGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPEL 120
           RTGRFD KNRRSS TT KEQ +E   EEE+RNR AG E   PIV++ GV FDV+ N+PEL
Sbjct: 61  RTGRFDSKNRRSS-TTIKEQDKE---EEEERNRTAGIEMGSPIVENAGVVFDVDENLPEL 120

Query: 121 PGLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQ 180
           PGLQPDFWEG QWD  GFFLEYLWAFGI FALIACGIAVTTYNEGATDFK+TPAYKESVQ
Sbjct: 121 PGLQPDFWEGPQWDALGFFLEYLWAFGIVFALIACGIAVTTYNEGATDFKETPAYKESVQ 180

Query: 181 TQEILEEPEGSSADVFESNPTEVAPSLE 206
           T+EIL EPE S+ DVFESNPTEVAPSLE
Sbjct: 181 TREIL-EPEASNPDVFESNPTEVAPSLE 202

[Close]

BLAST of Sed0000228 vs. ExPASy TrEMBL
Match: A0A6J1E7K1 (uncharacterized protein LOC111430129 OS=Cucurbita moschata OX=3662 GN=LOC111430129 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 6.2e-69
Identity = 149/207 (71.98%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 1   MALTITT--ARAAAGGGILHQITTRNPPNQLLLRRSAFSPPSNEARTALHIVQAKKSSSR 60
           MALTIT   A    GGGIL++ +TR P NQ+L RR+A   PS EART LH+V +KKSS R
Sbjct: 1   MALTITNGGATCGTGGGILYRTSTRTPSNQVLFRRNALFSPSKEART-LHVVHSKKSSFR 60

Query: 61  TGRFDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELP 120
            GR D KNRRSS T+TKEQ+E+Q   EE++NR A       I ++ GVAFDV+ N+PELP
Sbjct: 61  IGRIDSKNRRSS-TSTKEQEEQQ---EEEQNRMA------EIAENAGVAFDVDENLPELP 120

Query: 121 GLQPDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQT 180
           GLQPDFWEG QWDP GFFLEYLWAFGIAFA+IACGIAVTTYNEGATDFKDTPAYKESVQT
Sbjct: 121 GLQPDFWEGQQWDPLGFFLEYLWAFGIAFAVIACGIAVTTYNEGATDFKDTPAYKESVQT 180

Query: 181 QEILEEPEGSSADVFESNPTEVAPSLE 206
           QEILEEPE S+ DVFESNPTEVAPSLE
Sbjct: 181 QEILEEPEASNPDVFESNPTEVAPSLE 196

[Close]

BLAST of Sed0000228 vs. TAIR 10
Match: AT1G73885.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 3.1e-28
Identity = 69/144 (47.92%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 62  FDGKNRRSSATTTKEQKEEQELEEEDRNRAAGFERDGPIVDSGGVAFDVEANMPELPGLQ 121
           FDG+N  S      E  +   +      R  G  +D P           +  + +LPGL+
Sbjct: 51  FDGENPPSQIVINDEDGDRTVV----NTRFRGDPKDAP-----------KFAIKDLPGLE 110

Query: 122 PDFWEGSQWDPFGFFLEYLWAFGIAFALIACGIAVTTYNEGATDFKDTPAYKESVQTQEI 181
           PD +EG +WD  GFF++YLWAFGI FALI+ G+A  TYNEGATDFK+TP YKE++Q++++
Sbjct: 111 PDPFEGEKWDGLGFFVQYLWAFGILFALISGGLAAGTYNEGATDFKETPVYKEAIQSRDL 170

Query: 182 LEEPEGS-SADVFESNPTEVAPSL 205
           L+E E S S DVFESNPTEVAP++
Sbjct: 171 LDEAESSNSEDVFESNPTEVAPTI 179

The following BLAST results are available for this feature:

BLAST of Sed0000228 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134616.1	1.5e-77	78.26	uncharacterized protein LOC111006843 [Momordica charantia]	[more]
XP_038876354.1	7.7e-74	74.88	uncharacterized protein LOC120068690 [Benincasa hispida]	[more]
XP_022987248.1	3.4e-69	71.50	uncharacterized protein LOC111484859 [Cucurbita maxima]	[more]
KAG6589553.1	4.4e-69	72.46	hypothetical protein SDJN03_14976, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008453388.1	9.8e-69	73.56	PREDICTED: uncharacterized protein LOC103494120 [Cucumis melo] >KAA0041427.1 put...	[more]

BLAST of Sed0000228 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0000228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYA9	7.3e-78	78.26	uncharacterized protein LOC111006843 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JIX0	1.6e-69	71.50	uncharacterized protein LOC111484859 OS=Cucurbita maxima OX=3661 GN=LOC111484859...	[more]
A0A5A7UV79	4.7e-69	73.56	Putative AT-rich interactive domain-containing protein 5A OS=Cucumis melo var. m...	[more]
A0A1S3BW57	4.7e-69	73.56	uncharacterized protein LOC103494120 OS=Cucumis melo OX=3656 GN=LOC103494120 PE=...	[more]
A0A6J1E7K1	6.2e-69	71.98	uncharacterized protein LOC111430129 OS=Cucurbita moschata OX=3662 GN=LOC1114301...	[more]

BLAST of Sed0000228 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73885.1	3.1e-28	47.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..205
None	No IPR available	PANTHER	PTHR36004:SF1	AT-RICH INTERACTIVE DOMAIN PROTEIN	coord: 1..205
None	No IPR available	PANTHER	PTHR36004	AT-RICH INTERACTIVE DOMAIN PROTEIN	coord: 1..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000228.1	Sed0000228.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane