Sed0000195 (gene) Chayote v1

Overview


Name	Sed0000195
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Calcium-binding protein CML10
Location	LG11: 23985407 .. 23985852 (+)
RNA-Seq Expression	Sed0000195
Synteny	Sed0000195

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATTTCATCCCCTTCCATCGTCTTCTCGTTCCATGGGGAACTCGAAAAGTATACGCTACATCCGAGTCTTGGTTCCGCTGACAGAAGAGGAACTCGCTAACGTTTTTAAGAGCCACGACCGAGATGGTGACGGAAAGCTGACAAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCGCGCTTCAGCTCCTTCAGAGTCAAAGAAGCCCTACGTTTTGCCGATACCAACGGTGACGGAGTCATCAGCATGCATGAGATGAAAAATCTTATTCACTATGCCCAAACTTGTAAATATTATATATCTTAGTTAAAACTATGCATATGTTTTCTCAAACGAATATGTTAAATTAGTTATTGTTTATGCTTCATGTGTGTATTATTGTGTATTTAAATTAGTGATAAACAAAATTGGTTGAAATTAAAACCTCCAACATCTAGG

mRNA sequence

AAAAATTTCATCCCCTTCCATCGTCTTCTCGTTCCATGGGGAACTCGAAAAGTATACGCTACATCCGAGTCTTGGTTCCGCTGACAGAAGAGGAACTCGCTAACGTTTTTAAGAGCCACGACCGAGATGGTGACGGAAAGCTGACAAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCGCGCTTCAGCTCCTTCAGAGTCAAAGAAGCCCTACGTTTTGCCGATACCAACGGTGACGGAGTCATCAGCATGCATGAGATGAAAAATCTTATTCACTATGCCCAAACTTGTAAATATTATATATCTTAGTTAAAACTATGCATATGTTTTCTCAAACGAATATGTTAAATTAGTTATTGTTTATGCTTCATGTGTGTATTATTGTGTATTTAAATTAGTGATAAACAAAATTGGTTGAAATTAAAACCTCCAACATCTAGG

Coding sequence (CDS)

ATGGGGAACTCGAAAAGTATACGCTACATCCGAGTCTTGGTTCCGCTGACAGAAGAGGAACTCGCTAACGTTTTTAAGAGCCACGACCGAGATGGTGACGGAAAGCTGACAAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCGCGCTTCAGCTCCTTCAGAGTCAAAGAAGCCCTACGTTTTGCCGATACCAACGGTGACGGAGTCATCAGCATGCATGAGATGAAAAATCTTATTCACTATGCCCAAACTTGTAAATATTATATATCTTAG

Protein sequence

MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKNLIHYAQTCKYYIS

Homology

[Close]

BLAST of Sed0000195 vs. NCBI nr
Match: KAA0060899.1 (putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa])

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30
Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEA 60
          MGNSKS  Y RVLVP +EE+LANVFK+HDRDGDG LTKEELKQAF+YLGSRFS+FRV+EA
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEA 60

Query: 61 LRFADTNGDGVISMHEMKNLIHYAQTCKYYIS 93
          LR ADTNGDGVISM EM  LI YA+T KY IS
Sbjct: 61 LRAADTNGDGVISMDEMGKLIKYAKTRKYTIS 92

[Close]

BLAST of Sed0000195 vs. NCBI nr
Match: KAG7020569.1 (hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.9 bits (346), Expect = 4.4e-29
Identity = 69/89 (77.53%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEA 60
          MGN+KS  Y RVLVP TEE+LA +FKSHDRDGDGKL+KEELKQAF YLGSRFSSFRVKEA
Sbjct: 1  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 60

Query: 61 LRFADTNGDGVISMHEMKNLIHYAQTCKY 90
          LR ADTNGDG ISM EM  LI Y +  KY
Sbjct: 61 LRAADTNGDGFISMDEMNKLIKYTKGRKY 89

[Close]

BLAST of Sed0000195 vs. NCBI nr
Match: KAG7020566.1 (hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135.2 bits (339), Expect = 2.9e-28
Identity = 67/85 (78.82%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 1   MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEA 60
           MGN+KS  Y RVLVP TEE+LA +FKSHDRDGDGKL+KEELKQAF YLGSRFSSFRVKEA
Sbjct: 36  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 95

Query: 61  LRFADTNGDGVISMHEMKNLIHYAQ 86
           LR ADTNGDG ISM EM  LI Y +
Sbjct: 96  LRAADTNGDGFISMDEMNKLIKYTK 120

[Close]

BLAST of Sed0000195 vs. NCBI nr
Match: KAG6585663.1 (hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135.2 bits (339), Expect = 2.9e-28
Identity = 67/85 (78.82%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 1  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEA 60
          MGN+KS  Y RVLVP TEE+LA +FKSHDRDGDGKL+KEELKQAF YLGSRFSSFRVKEA
Sbjct: 1  MGNAKSTNYKRVLVPFTEEQLAAIFKSHDRDGDGKLSKEELKQAFNYLGSRFSSFRVKEA 60

Query: 61 LRFADTNGDGVISMHEMKNLIHYAQ 86
          LR ADTNGDG ISM EM  LI Y +
Sbjct: 61 LRAADTNGDGFISMDEMNKLIKYTK 85

[Close]

BLAST of Sed0000195 vs. NCBI nr
Match: KAG6585662.1 (hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.0 bits (336), Expect = 6.4e-28
Identity = 67/89 (75.28%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEA 60
          MGNSKS  Y RVLVPLTEE+LA +FKSHDRDGDGKLTKEELKQAF YLGSRFSSFR  EA
Sbjct: 1  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEA 60

Query: 61 LRFADTNGDGVISMHEMKNLIHYAQTCKY 90
          LR AD +GDG I+M EM  LI Y +  KY
Sbjct: 61 LRAADADGDGTINMAEMSKLIQYTKNRKY 89

[Close]

BLAST of Sed0000195 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.7e-08
Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 18  EEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEM 77
           EEE+   FK  D+DG+G +T EEL      LG R S   V + +R ADT+GDGVI+  E 
Sbjct: 84  EEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143

Query: 78  KNLI 82
             +I
Sbjct: 144 SRVI 147

[Close]

BLAST of Sed0000195 vs. ExPASy Swiss-Prot
Match: P62203 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 6.5e-07
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 17  TEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHE 76
           TEEEL   F+  DRDGDG ++ +EL+     LG + ++  V E +R AD +GDG I+  E
Sbjct: 82  TEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEE 141

Query: 77  MKNLI 82
              ++
Sbjct: 142 FVKMM 146

[Close]

BLAST of Sed0000195 vs. ExPASy Swiss-Prot
Match: P24044 (Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4)

HSP 1 Score: 54.7 bits (130), Expect = 6.5e-07
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 17  TEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHE 76
           TEEEL   F+  DRDGDG ++ +EL+     LG + ++  V E +R AD +GDG I+  E
Sbjct: 82  TEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEE 141

Query: 77  MKNLI 82
              ++
Sbjct: 142 FVKMM 146

[Close]

BLAST of Sed0000195 vs. ExPASy Swiss-Prot
Match: Q9FZ75 (Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.5e-07
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 14  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVIS 73
           V +  E+L  +FKS DRDG+G ++  EL  A   +G   +   + E ++ ADTNGDGVIS
Sbjct: 76  VLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVIS 135

Query: 74  MHEMKNLI 82
             E  +++
Sbjct: 136 FGEFASIM 143

[Close]

BLAST of Sed0000195 vs. ExPASy Swiss-Prot
Match: Q9LI84 (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 8.5e-07
Identity = 26/68 (38.24%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 14  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVIS 73
           V + +E+L  VF+S DRDG+G +T  EL  +   +G   +   + E +  AD+NGDGVIS
Sbjct: 81  VLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEMMTEADSNGDGVIS 140

Query: 74  MHEMKNLI 82
            +E  +++
Sbjct: 141 FNEFSHIM 148

[Close]

BLAST of Sed0000195 vs. ExPASy TrEMBL
Match: A0A5A7V5B0 (Putative Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00320 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.1e-31
Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEA 60
          MGNSKS  Y RVLVP +EE+LANVFK+HDRDGDG LTKEELKQAF+YLGSRFS+FRV+EA
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEA 60

Query: 61 LRFADTNGDGVISMHEMKNLIHYAQTCKYYIS 93
          LR ADTNGDGVISM EM  LI YA+T KY IS
Sbjct: 61 LRAADTNGDGVISMDEMGKLIKYAKTRKYTIS 92

[Close]

BLAST of Sed0000195 vs. ExPASy TrEMBL
Match: A0A0A0LRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-30
Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEA 60
          MGNSKS  Y RVLVP +EE+LANVFK+HDRDGDG LTKEELKQAF+YLGSRF +FRV+EA
Sbjct: 1  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGHLTKEELKQAFEYLGSRFCNFRVEEA 60

Query: 61 LRFADTNGDGVISMHEMKNLIHYAQTCKYYIS 93
          LR ADTNGDGVISM EM  LI YA+T KY IS
Sbjct: 61 LRAADTNGDGVISMDEMGKLIKYAKTRKYTIS 92

[Close]

BLAST of Sed0000195 vs. ExPASy TrEMBL
Match: A0A7N2KRS3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-18
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 5   KSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFA 64
           K++ + R  VP  E++L N+FKSHD DGDGKL+++ELK AFKYLGSR+ ++R  +ALR A
Sbjct: 234 KAMAFKRTSVPFNEQQLLNIFKSHDVDGDGKLSRDELKNAFKYLGSRWDAYRTDQALRQA 293

Query: 65  DTNGDGVISMHEMKNLIHYAQTCKYYI 92
           D N DG I+  E+K L+ YA  C Y +
Sbjct: 294 DANDDGYITEDELKKLVEYALDCGYTV 320

[Close]

BLAST of Sed0000195 vs. ExPASy TrEMBL
Match: A0A2N9FYQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20260 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.0e-18
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 0


Query: 5  KSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFA 64
          K + + R  +P TEE+L N+FKSHD DGDGKL+++E+K+AFKYLGSR+ ++R  +A+  A
Sbjct: 4  KVMSFKRTTIPFTEEQLMNIFKSHDADGDGKLSQDEVKKAFKYLGSRWDAYRANQAIHLA 63

Query: 65 DTNGDGVISMHEMKNLIHYAQTCKYYI 92
          D + DG I   E+K L+ YA  C Y I
Sbjct: 64 DADDDGYIEEEELKKLVQYALDCGYTI 90

[Close]

BLAST of Sed0000195 vs. ExPASy TrEMBL
Match: A0A0A0LP43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357350 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.6e-16
Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 1  MGNSKSIRYIRVLVPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEA 60
          MG S  + +      LTE E+A VFK+HD+DGDG+LTKEELK AFKYLG +F++FRV +A
Sbjct: 1  MGTSNGLIFKCFPASLTEFEVAKVFKNHDKDGDGRLTKEELKSAFKYLGYKFTTFRVHQA 60

Query: 61 LRFADTNGDGVISMHEMKNLIHY 84
          L  AD N D VIS  EM  LI Y
Sbjct: 61 LHAADDNCDDVISFEEMSKLIMY 83

[Close]

BLAST of Sed0000195 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 54.3 bits (129), Expect = 6.0e-08
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 14  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVIS 73
           V +  E+L  +FKS DRDG+G ++  EL  A   +G   +   + E ++ ADTNGDGVIS
Sbjct: 76  VLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVIS 135

Query: 74  MHEMKNLI 82
             E  +++
Sbjct: 136 FGEFASIM 143

[Close]

BLAST of Sed0000195 vs. TAIR 10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 54.3 bits (129), Expect = 6.0e-08
Identity = 26/68 (38.24%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 14  VPLTEEELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVIS 73
           V + +E+L  VF+S DRDG+G +T  EL  +   +G   +   + E +  AD+NGDGVIS
Sbjct: 81  VLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEMMTEADSNGDGVIS 140

Query: 74  MHEMKNLI 82
            +E  +++
Sbjct: 141 FNEFSHIM 148

[Close]

BLAST of Sed0000195 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07
Identity = 23/63 (36.51%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 19  EELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMK 78
           +EL  VF+  DRDGDG +++ EL +  K +G + ++   +  +R AD +GDG +S HE  
Sbjct: 84  DELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFS 143

Query: 79  NLI 82
            ++
Sbjct: 144 KMM 146

[Close]

BLAST of Sed0000195 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family )

HSP 1 Score: 51.2 bits (121), Expect = 5.1e-07
Identity = 24/61 (39.34%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 20 ELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKN 79
          EL  VF+  D+DGDGK+T +EL ++FK LG       + + ++  D NGDG + + E   
Sbjct: 5  ELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGE 64

Query: 80 L 81
          L
Sbjct: 65 L 65

[Close]

BLAST of Sed0000195 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 50.8 bits (120), Expect = 6.6e-07
Identity = 24/61 (39.34%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 20 ELANVFKSHDRDGDGKLTKEELKQAFKYLGSRFSSFRVKEALRFADTNGDGVISMHEMKN 79
          EL+ VF+  D++GDGK+ K ELK  FK +G       + E +   D NGDG + + E  +
Sbjct: 5  ELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGS 64

Query: 80 L 81
          L
Sbjct: 65 L 65

The following BLAST results are available for this feature:

BLAST of Sed0000195 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060899.1	1.1e-30	79.35	putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]	[more]
KAG7020569.1	4.4e-29	77.53	hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7020566.1	2.9e-28	78.82	hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6585663.1	2.9e-28	78.82	hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6585662.1	6.4e-28	75.28	hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0000195 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05933	7.7e-08	45.31	Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c...	[more]
P62203	6.5e-07	40.00	Calmodulin OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF14_0323 PE=3 SV=...	[more]
P24044	6.5e-07	40.00	Calmodulin OS=Plasmodium falciparum OX=5833 PE=3 SV=4	[more]
Q9FZ75	8.5e-07	39.71	Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 ...	[more]
Q9LI84	8.5e-07	38.24	Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 ...	[more]

BLAST of Sed0000195 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5B0	5.1e-31	79.35	Putative Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LRB6	2.5e-30	78.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357340 PE=4 SV=1	[more]
A0A7N2KRS3	2.2e-18	52.87	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2N9FYQ0	5.0e-18	50.57	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20260 PE=4 SV=1	[more]
A0A0A0LP43	3.6e-16	57.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357350 PE=4 SV=1	[more]

BLAST of Sed0000195 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18530.1	6.0e-08	39.71	EF hand calcium-binding protein family	[more]
AT3G25600.1	6.0e-08	38.24	Calcium-binding EF-hand family protein	[more]
AT3G51920.1	3.0e-07	36.51	calmodulin 9	[more]
AT4G03290.1	5.1e-07	39.34	EF hand calcium-binding protein family	[more]
AT4G12860.1	6.6e-07	39.34	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 56..84 e-value: 0.17 score: 21.0 coord: 20..48 e-value: 6.8E-4 score: 28.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 18..80 e-value: 1.1E-12 score: 48.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 16..51 score: 16.521873
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 52..87 score: 10.97069
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 20..82 e-value: 4.7829E-16 score: 64.1061
None	No IPR available	GENE3D	1.10.238.10		coord: 3..82 e-value: 1.6E-17 score: 65.4
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 12..85
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 12..85
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 29..41
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 65..77
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 12..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000195.1	Sed0000195.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding