Sed0000149 (gene) Chayote v1

Overview
NameSed0000149
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG04: 25578911 .. 25583838 (+)
RNA-Seq ExpressionSed0000149
SyntenySed0000149
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGACGTCTTCGGGCAAGGCGAAGCAGAAGATAAGGAAATTTTGGAAGTTGTAGCGGACGATACACAGTTGGCACTTCACCAACCTCATACTAAGGCTTTCATGCTGGATTTAGCGAACTCCCAAGAAACAACCTCTGAAGCAACTTCGAGCAAGCAGTTCGTGGAAGACTTGGAGCGTTTCGTAAGTGCAGAAAGGGATCTGATGAAAGTAGATCCGTGTAGCAAAACCAATGTCTCGCCGCAAGGTGGAAATGCTGCTGATCTAATCAGTAACGAGATCACTATCATGATCGATGAAGAAAGCACTCCTTGCGGAGGTGAAGAAAAGGTCAACTCTAAGGAGGTGCTGGAAAGAGAATTGGAAGAAGGTAGAATCGCTGCCGCAAACTCTGAAAGCGAAGAGGAGTCTGAACTCGAGCCTTTGCAAAGAAAGCCGAGGTTAAAGGGAATTCCAGGGTTGAAGAGGAAAAGGATAGAGAACCATACAACTACCTCTTCGCCGCCTAAGAAGCAGATCAAAAGCAAAATGGCAACGGTTCGCTTGGCGGAGAAAATGAGCAAAGTCATCAGCAAGAATGTCATAATGTATCAATGGAAGAAGTTCTTGTTCGAGCAGGTGTTTGACCTCGATCTTAAAGGCATGTCTCAGTCCGTAGTCACCCAAATTGAAAATCGAAGCTAGAGCCATCTCTGCACATATCCCGGCGAAGCATGGAGAGACTAGGTAATCGAATTCTTCACTAGTCTGATCGATCGTTCAGGCCAACAAGCAACCATTTGCGACCAAAAAATCACTTGGGCACCCAAAGATTAGAATAAATACTTCATGCTAGAAGACGAAGACTCGGACTATGAGAAGTTTTTAAACGGGTAAGCCAAGGGCGATCTTGAGACTTGCCTTAAGGTCATAGGGATCGAAGAAGCTACTTTGGACAAAAAACCACAGTCTCACTGATTTCATACAATGAATCTAAATGATGACGGACGCATCTGGGCATCATTTCTGAAATCTTCGCTCATGCCTATTTTGCATGATTCTACACTCACGGTTCGACTAGCGCTGCTCATCTACTCAATTATGGTCGGCCTCTCGATGAACATAAGACGCCTTATTTCATTAGAAATTCAAGCGTGGAAATGGGCGAAAGGCGAGGCACTTCATCTTCCCTCATTTCATCTCCGAGCTCCACTGACACTAAGGGTTGAAGGGAAAACCAAATGATTCTTTTATCACCAGATGAAAAATAATCTTTTTCACCCTGAAGGCACCTACACGCACAACTCGCTCGACCAAAAAGAATAAGGCAACCTCTAGCGGAAACGAAGAGCAACTGCAATGTTACGAGGAATCAGGGACGAGAATCACACCTTTTATCACTACTTCTATGAGCGAGAAAGGGAGCTACAACAAGTCCTCGTTGACCCGAATGGAGGTACTTATCAGTGGCATCCGCTTCTAGAATTCCAGCCTCAATCGGCAGAATCAAGCGATGACTCCTCTGCACAATAATGGAAGTTTATTTTCTCTTATCTTCTTTCGCTAATATATTTTTTTTAGTACTTTGTGATTACTTGCTTCTTATTACTTTTCCATTTTCCCACGCTTATATGTATCATTTTTGCAAAATAATATGAAGCAAATTGAATACTATCGATTTCGAGTAGTAAGATGTCTATTGTTTGTCTCTGTGTGAATTTTACTATTAACAATCTCTGTGAATAATTCAAGTCTATTTCTTTATATAAATAATTTTCTAATTCTTCAATGCTGGTGCGAAACTTGTAAATGAAAGAGCGAAATCGTGGTCCATATCGCAAACCCATTAAGCTTAAACCGTTAATTTCAAAAATATCCTTGTCCATAGAGAAACCCAATTAAATTTTACCCAAGCCTTAAACTTCTAGCAAACTTTAAGTTTGAGGGTGTTGTGTGTTGTCATTGGAACAATGAAAAGTCTAAGTTTGGGGGTGGAATTTTTCGAAGCGAAAGAAAATATGCTTCATGAATGATTTAGCATAGAAATAGACGTCATTTCGCTAAAGTAAAAGGTGAGATTTGCAAAGCCTAACCCAGAGGTGAAAAAACAATTCAAAAATTTCAAAATGCCCCCAAAGCAAAATGCAAGAGCGAAGTGAATCAAAGGCTAGTAGCCCAAGTCCTGGGAGTATTTCTCCACTGTCAATTTCTCGAATATCGCGTACATATATTTATACCAAACAGTCGATGAAAAATTGAGCAAAGGACAGTAGGAAACTATGAGTGAGGAATCCCCAGTGAACTGTAAAAGGACAACATTCACTTCGACAAAAGATAAGATGTACCAATCATAAAGGGAGCGAAAGGTTTAAAGCAAATAGCGAAATTTATTGGTTAGTCAAGTTGTAAGGAACCAAAGAGTTAAAAGTCTAAAGAAAAAGAGGTTTGCGCAAATAAGTGGCTAATACGATTGAAAGATAAGAGTTCATAAATTTAAAAAGCTTCACTCAACATGTTCCAGTTAGAAAGGAATGTTGCTTAAAAATTTACTTGAATTTTCAAAGTGTGTTGTTAATTGTCTTTCACAAAGTTGATGAAAATAACTCGCTGTCTCGAAAGAAGATAGAAAAAAAAAGCAAGTGCTCTTAAGTGAAAACTAAGCTATTAATCGGGACGAGAAATAATGCAAGTTTGGGGGTGTGATAACTCACAAGAATTGCTCAATAATTGAGAAATAAAGTAGCTTAAATTAGTAGGTATATGGAGAAAATGTCCTATAATTAACTACTGAAATAAGGAACGTTGCCCCAATAGACTATAAACTGAAGCATAAGCGAAATGTCATATAATATCTTGCTTAAAATGAATGTAGAAGTTTGTTGCAACAAAATGTGCACGAATGCATAAGAAATTGTTAAGTGTTAAAAGAACTGATATTTGTAGTTTGTTGTAGTGACATTCGGGGAAGCCAAGTAGAATGAAATAACCAATAATCTCTCAAGCAAAAGGTTGGGAGAAATTATCTAACCTAGGGGACGTGTGGAATAGATCTAGAGTTCAAAGGATTCATCTTGGCCGTTGGTTAGTGTCGGCTCTGACGCACTCGAAAAAGTGCATCATGGAGCATAATGAAGTAAGAAACAGAGCAGCTTTTTGGCAGAAGCGGATCGTGGAGCAAGCGTCGCAGCGAATGTCGGGAGGCCTATATAAGGCGAGGTGTTCCTCAGAAGAAGGGTTGGCCAATTTTTCTCTTCAGAAATTTCTCATTCAGTTTGTGTTCATCATTCCGGTCCGACTAGAATTTTACACATTTGAAGACGATTACATTGTAACTGGAATTTACACCGGAGATCTGTCAAGCTATCAAAGGTTTAGGCGTTTTCTTACTCTTCCATCCTTATACATTGTTATTTTGTGTAATCTTATTTCTATTAAAGCATGTTTTCCATCCTTTGTTTGTGTTTGAACATGTTTTCTATCAAAGCTATCAAATGGTTTTGGGGAAGTAAGGGATTTCGCTAAGGCGACGTGGGTAGCGAACAGAACGTATTATGCATGTTGTCTCTTATCTAATATACATTTCATTTTACAACTGTTTGTATTAACTCTGTGATGATTCGAGAGAGGAAATATAGAGCGAACTTGCGTGTATGAAATTAAGACTGTTAAACTTACTTGCTAATTAAAAAACGCATAGAGATAAGGTTCGTCTAATGCTAACTGCTGGTTTTTTAGTTGTTTGAGTTCAAGATGACCAAATTAAGATCTTGAGAAAGCCGAATACTAGAGTTCGAGAGAACCAAGGGGATTCTTGTTAGTGTTTGCCTTCACTATTCGCTTCATTTAAGCGAATCCCTGAAAACCTTTACCCTCCCGATAATTCATCTCATATATTTATTCGGTTATTTCATTTATTCATTCACAATCAATACTCGTTTATCCAAAACATTGGTTACTTTGACTCTTACATGAAAAAAAATTTAAAACAAGTCGAAAATTCTTGTGGAGAATGACCTATACTGACAGATAAACTTGCTACAATAGACTGTGTATTCTTGCACAATCGTTGGAATTGACTCACACACTTTGCTTGGTTAATTAGATATCTCGCTTCAGCGAAATTATATCATCTCCACGTCACCATTCTCACATCATTATTACTTACTTAATTTGTGTGATGGATAATTCCACAACAGGAGCCCTGGCTCAAGATCGATCGTACCAATTGACACACATGCATAACTTGAGGTATGGGTTGCTAACATCGTGGCAATATACCTTGACCGAACCTCAACCCAAACCGGTTCTCCCTAACCGGCTTCAAGTTATGGCCCATTCCTTTGACTCGATTGAACCGGTCCGAGCATTCGACTCAATAGAGTTTTCAAGTTGGGCCATGATTCGACACACTTTTTGTCGAGTTCCTTCTTTGCATTGGTTTATCTTTGGGCTCTTCTTTAGGCCAAACTTCATATGGTGCATCATCTGCCTCAACTTCATTATAGTTTTGTAGCTGGTGTAGTTGCGGTTTTTCGCTTTTAGTTTTGTCTTGGGTTTTATGGGTGTCCTTTGGTCTAGTTAATTGATAAAGGATTATCTTAATAGAAAGTCGATCAGTCAGTTCAATGGTAGGAGAAGTTCCCTTGCGGGATCTACTCTTCCTCTTTTATCTTTGGCCAAGTCACGTTCCTCAGTTAGCAATATGATTATTGATTTGTCCCCAAATAATCTGGAAAGTATTCATCCATTTCTGTGTTGATGTTTTTTGGTTGATTTTCTCTTTTGGAATCTTGTTATTCCAATTCTACAAAGATCTTGGTTGGAGTTGACGCTCCTCTATTTTATTTGGCTTTTCCATGTGTTAGGGCAGCCACCTTCCGACGGGGGCTAAGTTATGTGTGAGGGTTGTACCCCCTTCTGTTGTGTTTCATCTCTTAGAGGTATGA

mRNA sequence

ATGATGGACGTCTTCGGGCAAGGCGAAGCAGAAGATAAGGAAATTTTGGAAGTTGTAGCGGACGATACACAGTTGGCACTTCACCAACCTCATACTAAGGCTTTCATGCTGGATTTAGCGAACTCCCAAGAAACAACCTCTGAAGCAACTTCGAGCAAGCAGTTCGTGGAAGACTTGGAGCGTTTCGTAAGTGCAGAAAGGGATCTGATGAAAGTAGATCCGTGTAGCAAAACCAATGTCTCGCCGCAAGGTGGAAATGCTGCTGATCTAATCAGTAACGAGATCACTATCATGATCGATGAAGAAAGCACTCCTTGCGGAGGTGAAGAAAAGGTCAACTCTAAGGAGGTGCTGGAAAGAGAATTGGAAGAAGGTAGAATCGCTGCCGCAAACTCTGAAAGCGAAGAGGAGTCTGAACTCGAGCCTTTGCAAAGAAAGCCGAGAAAGTCGATCAGTCAGTTCAATGGTAGGAGAAGTTCCCTTGCGGGATCTACTCTTCCTCTTTTATCTTTGGCCAAGTCACGTTCCTCAGGCAGCCACCTTCCGACGGGGGCTAAGTTATGTGTGAGGGTTGTACCCCCTTCTGTTGTGTTTCATCTCTTAGAGGTATGA

Coding sequence (CDS)

ATGATGGACGTCTTCGGGCAAGGCGAAGCAGAAGATAAGGAAATTTTGGAAGTTGTAGCGGACGATACACAGTTGGCACTTCACCAACCTCATACTAAGGCTTTCATGCTGGATTTAGCGAACTCCCAAGAAACAACCTCTGAAGCAACTTCGAGCAAGCAGTTCGTGGAAGACTTGGAGCGTTTCGTAAGTGCAGAAAGGGATCTGATGAAAGTAGATCCGTGTAGCAAAACCAATGTCTCGCCGCAAGGTGGAAATGCTGCTGATCTAATCAGTAACGAGATCACTATCATGATCGATGAAGAAAGCACTCCTTGCGGAGGTGAAGAAAAGGTCAACTCTAAGGAGGTGCTGGAAAGAGAATTGGAAGAAGGTAGAATCGCTGCCGCAAACTCTGAAAGCGAAGAGGAGTCTGAACTCGAGCCTTTGCAAAGAAAGCCGAGAAAGTCGATCAGTCAGTTCAATGGTAGGAGAAGTTCCCTTGCGGGATCTACTCTTCCTCTTTTATCTTTGGCCAAGTCACGTTCCTCAGGCAGCCACCTTCCGACGGGGGCTAAGTTATGTGTGAGGGTTGTACCCCCTTCTGTTGTGTTTCATCTCTTAGAGGTATGA

Protein sequence

MMDVFGQGEAEDKEILEVVADDTQLALHQPHTKAFMLDLANSQETTSEATSSKQFVEDLERFVSAERDLMKVDPCSKTNVSPQGGNAADLISNEITIMIDEESTPCGGEEKVNSKEVLERELEEGRIAAANSESEEESELEPLQRKPRKSISQFNGRRSSLAGSTLPLLSLAKSRSSGSHLPTGAKLCVRVVPPSVVFHLLEV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0000149.1Sed0000149.1mRNA