Sed0000148 (gene) Chayote v1

Overview
NameSed0000148
Typegene
OrganismSechium edule (Chayote v1)
Descriptionethylene-responsive transcription factor ERF039
LocationLG04: 31597154 .. 31597910 (+)
RNA-Seq ExpressionSed0000148
SyntenySed0000148
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTTTCGAAACCCTTGAAAATACAGCCGTCCCCTAGAATGGAGGATGGAAGTGGTACATATGGAGTATCCAATGGGTGGTAAGCTGAAAGGGCAAAAAAGTAGAAAGTAGAAACGTGGTGTGTATTTAAGGCCGCCCTTTGATTGTGTGTGAACCCTCCATGGAAGATCCTCTTCAAAGCAGCTTCCAATTAGAGTCTTCTGCATCCTCCTCCTCAGGAATGAAAAAGAACCCAAAAAGGGGAAGCGACTATCGGGGGGTCCGAATGCGCCAATGGGGGAAGTGGGTTTCCGAAATCAGAGAGCCCAAAAAGAAATCCCGGATCTGGTTGGGCACTTTCCCCACCCCCGAAATGGCCGCCAGAGCCCACGACGTCGCCGCCAGAGCCATCAAAGGCCCCTCCGCCGTCCTCAACTTCCCCGAACTCGCCCACCGCCTCCCCCTCCCCGCCACCTCTTCCCCCAAGGCCATCCGAGCCGCCGCCGCCAGAGCCGCCTCCTTCTCCGACGCCCCCTCCGCCGCCGACCCTTTCTTCGATGACCTTCCCGATCTCTTCCTTCACCCCAATCGCCATCTCGATACCCTCTGTTTCGACTCTGTTTTCGGCCGCCCCTTCTCGCCCTCGCCCGAATCTTTCGCCTACGCCTCCCTTCCAGAAGCTTCCACATTTTGATCTCTCTTTTTTCTTTTTGGGTTTTTCTGTTTTTTTTTCTAATTTCATCCTCATCTTTATTGTTTACTTCTATTATTAATTTG

mRNA sequence

ATATTTTCGAAACCCTTGAAAATACAGCCGTCCCCTAGAATGGAGGATGGAAGTGGTACATATGGAGTATCCAATGGGTGGTAAGCTGAAAGGGCAAAAAAGTAGAAAGTAGAAACGTGGTGTGTATTTAAGGCCGCCCTTTGATTGTGTGTGAACCCTCCATGGAAGATCCTCTTCAAAGCAGCTTCCAATTAGAGTCTTCTGCATCCTCCTCCTCAGGAATGAAAAAGAACCCAAAAAGGGGAAGCGACTATCGGGGGGTCCGAATGCGCCAATGGGGGAAGTGGGTTTCCGAAATCAGAGAGCCCAAAAAGAAATCCCGGATCTGGTTGGGCACTTTCCCCACCCCCGAAATGGCCGCCAGAGCCCACGACGTCGCCGCCAGAGCCATCAAAGGCCCCTCCGCCGTCCTCAACTTCCCCGAACTCGCCCACCGCCTCCCCCTCCCCGCCACCTCTTCCCCCAAGGCCATCCGAGCCGCCGCCGCCAGAGCCGCCTCCTTCTCCGACGCCCCCTCCGCCGCCGACCCTTTCTTCGATGACCTTCCCGATCTCTTCCTTCACCCCAATCGCCATCTCGATACCCTCTGTTTCGACTCTGTTTTCGGCCGCCCCTTCTCGCCCTCGCCCGAATCTTTCGCCTACGCCTCCCTTCCAGAAGCTTCCACATTTTGATCTCTCTTTTTTCTTTTTGGGTTTTTCTGTTTTTTTTTCTAATTTCATCCTCATCTTTATTGTTTACTTCTATTATTAATTTG

Coding sequence (CDS)

ATGGAAGATCCTCTTCAAAGCAGCTTCCAATTAGAGTCTTCTGCATCCTCCTCCTCAGGAATGAAAAAGAACCCAAAAAGGGGAAGCGACTATCGGGGGGTCCGAATGCGCCAATGGGGGAAGTGGGTTTCCGAAATCAGAGAGCCCAAAAAGAAATCCCGGATCTGGTTGGGCACTTTCCCCACCCCCGAAATGGCCGCCAGAGCCCACGACGTCGCCGCCAGAGCCATCAAAGGCCCCTCCGCCGTCCTCAACTTCCCCGAACTCGCCCACCGCCTCCCCCTCCCCGCCACCTCTTCCCCCAAGGCCATCCGAGCCGCCGCCGCCAGAGCCGCCTCCTTCTCCGACGCCCCCTCCGCCGCCGACCCTTTCTTCGATGACCTTCCCGATCTCTTCCTTCACCCCAATCGCCATCTCGATACCCTCTGTTTCGACTCTGTTTTCGGCCGCCCCTTCTCGCCCTCGCCCGAATCTTTCGCCTACGCCTCCCTTCCAGAAGCTTCCACATTTTGA

Protein sequence

MEDPLQSSFQLESSASSSSGMKKNPKRGSDYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAASFSDAPSAADPFFDDLPDLFLHPNRHLDTLCFDSVFGRPFSPSPESFAYASLPEASTF
Homology
[Close]
BLAST of Sed0000148 vs. NCBI nr
Match: XP_022158471.1 (ethylene-responsive transcription factor ERF039 [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-44
Identity = 123/206 (59.71%), Postives = 132/206 (64.08%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASSSSGMKKN-----------PKRGSD-----YRGVRMRQWGKWVS 60
           MEDPL   FQ +S +SSSS   KN            K GSD     YRGVRMRQWGKWVS
Sbjct: 1   MEDPLH-IFQFQSQSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWGKWVS 60

Query: 61  EIREPKKKSRIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAI 120
           EIREPKKKSRIWLGTF TPEMAARAHDVAAR IKG +A LNFPELAHRLP PA+SSPK I
Sbjct: 61  EIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSSPKDI 120

Query: 121 RAAAARAASF-------------SDAPSAA-------DPFFDDLPDLFLHPNRHLDTLC- 162
           RAAA +AASF             S A +AA       DPFF DLPDL L PN  ++TLC 
Sbjct: 121 RAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFF-DLPDLLLDPNHQIETLCF 180

[Close]
BLAST of Sed0000148 vs. NCBI nr
Match: XP_023005548.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita maxima])

HSP 1 Score: 186.0 bits (471), Expect = 2.6e-43
Identity = 121/212 (57.08%), Postives = 131/212 (61.79%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASSSSGMK--KNPKRGSD-----YRGVRMRQWGKWVSEIREPKKKS 60
           MEDPLQ  FQ +SS+SS    K  K  K G+D     YRGVRMRQWGKWVSEIREPKKKS
Sbjct: 1   MEDPLQ-RFQFQSSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKS 60

Query: 61  RIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAAS 120
           RIWLGTF TPEMAARAHDVAAR IKG SA LNFPELAHR P PA+SS K IRAAAA+AA+
Sbjct: 61  RIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKAAT 120

Query: 121 F-----------SDAPSAA--------------------DPFFDDLPDLFLHPNRHLDTL 166
           F            DA S +                    DPFF DLPDLFLHPN  + T 
Sbjct: 121 FPINSTDEDDDDDDAASQSDRNRSPSSVAAAAKSPGEIDDPFF-DLPDLFLHPNHQIGTF 180

[Close]
BLAST of Sed0000148 vs. NCBI nr
Match: XP_023540688.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.9 bits (468), Expect = 5.9e-43
Identity = 122/215 (56.74%), Postives = 132/215 (61.40%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASSSSGMK--KNPKRGSD-----YRGVRMRQWGKWVSEIREPKKKS 60
           MEDPLQ  FQ +SS+SS    K  K  K G+D     YRGVRMRQWGKWVSEIREPKKKS
Sbjct: 1   MEDPLQ-RFQFQSSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKS 60

Query: 61  RIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAAS 120
           RIWLGTF TPEMAARAHDVAAR IKG SA LNFPELAHR P PA+SS K IRAAAA+AA+
Sbjct: 61  RIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKAAT 120

Query: 121 F------------------------SDAPSAA----------DPFFDDLPDLFLHPNRHL 166
           F                        S A +AA          DPFF DLPDLFLHPN  +
Sbjct: 121 FPINSTDEDDDDDAASQSDRNCSPSSVAAAAAAAAKSPGEIDDPFF-DLPDLFLHPNHQI 180

[Close]
BLAST of Sed0000148 vs. NCBI nr
Match: XP_022945031.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita moschata] >KAG6596868.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028400.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-42
Identity = 119/209 (56.94%), Postives = 129/209 (61.72%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASS-SSGMKKNPKRGSD-----YRGVRMRQWGKWVSEIREPKKKSR 60
           MEDPLQ  FQ +SS+S       K  K G+D     YRGVRMRQWGKWVSEIREPKKKSR
Sbjct: 1   MEDPLQ-RFQFQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR 60

Query: 61  IWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAASF 120
           IWLGTF TPEMAARAHDVAAR IKG SA LNFPELAHR P PA+SS K IRAAAA+AA+F
Sbjct: 61  IWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKAATF 120

Query: 121 ---------SDAPSAA--------------------DPFFDDLPDLFLHPNRHLDTLC-- 166
                     DA S +                    DPFF DLPDLFLHPN  + T C  
Sbjct: 121 PINSTDEDDDDAASQSDRNRSPSSVAAAAKSPGEIDDPFF-DLPDLFLHPNHQIGTFCFS 180

[Close]
BLAST of Sed0000148 vs. NCBI nr
Match: XP_008448820.1 (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis melo] >KAA0041073.1 ethylene-responsive transcription factor ERF039 [Cucumis melo var. makuwa])

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-42
Identity = 120/205 (58.54%), Postives = 127/205 (61.95%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASSSSGMKKN---------PKRGSD-----YRGVRMRQWGKWVSEI 60
           MEDPLQ  FQ  S +SSSS   KN          K GSD     YRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLQ-RFQFHSQSSSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRA 120
           REPKKKSRIWLGTF TPEMAARAHDVAA+ IKG SA LNFPELAHRLP PA+SSPK IRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120

Query: 121 AAARAASFSDA--PSA---------------------ADPFFDDLPDLFL-HPNRHLDTL 159
           AAA+AA F+D   P A                      D  F DLPDLF+  PN  +DT 
Sbjct: 121 AAAKAALFNDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPNHQIDTF 180

[Close]
BLAST of Sed0000148 vs. ExPASy Swiss-Prot
Match: Q9SUK8 (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-33
Identity = 81/135 (60.00%), Postives = 96/135 (71.11%), Query Frame = 0 

Query: 15  ASSSSGMKKNPKRGSDYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAA 74
           +S +   +K   +  ++RGVRMRQWGKWVSEIREP+KKSRIWLGTF TPEMAARAHDVAA
Sbjct: 24  SSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAA 83

Query: 75  RAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAASFS----DAPSA-------ADP 134
            AIKG SA LNFPELA+ LP PA++ PK I+ AAA AA+      ++PS+       AD 
Sbjct: 84  LAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAVDWKAPESPSSTVTSSPVADD 143

Query: 135 FFDDLPDLFLHPNRH 139
            F DLPDL L  N H
Sbjct: 144 AFSDLPDLLLDVNDH 158

[Close]
BLAST of Sed0000148 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-32
Identity = 82/146 (56.16%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 30  DYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPEL 89
           ++RGVRMRQWGKWVSEIREPKKKSRIWLGTF T EMAARAHDVAA AIKG SA LNFPEL
Sbjct: 44  NFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPEL 103

Query: 90  AHRLPLPATSSPKAIRAAAARAA----------SFSDAPS-------------AADPFFD 149
           A+ LP PA++ PK I+AAAA AA          + S +PS              +D  F 
Sbjct: 104 AYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAFS 163

Query: 150 DLPDLFLHPNRHLDTLCFDSVFGRPF 153
           DLPDL L+ N ++D       +  PF
Sbjct: 164 DLPDLLLNVNHNIDGFWDSFPYEEPF 189

[Close]
BLAST of Sed0000148 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-32
Identity = 78/145 (53.79%), Postives = 93/145 (64.14%), Query Frame = 0 

Query: 16  SSSSGMKKNPKRGSDYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAAR 75
           S  +  KK  +    YRGVRMR WGKWVSEIREP+KKSRIWLGTF TPEMAARAHD AA 
Sbjct: 28  SHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAAL 87

Query: 76  AIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAASFSDAPSAADPFFDDLPDLFLHP 135
            IKG SAVLNFPELA  LP PA+SSP+ ++AAAA AA+   +PS++     D   +    
Sbjct: 88  TIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPA 147

Query: 136 NRHLDTLCFDSVFGRPFSPSPESFA 161
              L +  + +      SPS E  A
Sbjct: 148 ETQLSSSSYSTCTSSSLSPSSEEAA 172

[Close]
BLAST of Sed0000148 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29
Identity = 73/121 (60.33%), Postives = 86/121 (71.07%), Query Frame = 0 

Query: 13  SSASSSSGMKKNPKRGSD------YRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMA 72
           S  S +   +K  KRG D      YRGVRMR WGKWVSEIREP+KKSRIWLGTFPTPEMA
Sbjct: 27  SDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMA 86

Query: 73  ARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAA------SFSDAPSA 122
           ARAHDVAA +IKG +A+LNFPELA   P P + SP+ I+ AA +AA      SFS + S+
Sbjct: 87  ARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSS 146

[Close]
BLAST of Sed0000148 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0 

Query: 16  SSSSGMKKNPKRGSDYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAAR 75
           SSS   KK   +   YRGVRMR WGKWVSEIREP+KKSRIWLGTFPT EMA RAHDVAA 
Sbjct: 4   SSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAM 63

Query: 76  AIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAA 113
           +IKG SA+LNFPEL+  LP P + SP+ +RAAA +AA
Sbjct: 64  SIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAA 100

[Close]
BLAST of Sed0000148 vs. ExPASy TrEMBL
Match: A0A6J1E0Z9 (ethylene-responsive transcription factor ERF039 OS=Momordica charantia OX=3673 GN=LOC111024955 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.3e-44
Identity = 123/206 (59.71%), Postives = 132/206 (64.08%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASSSSGMKKN-----------PKRGSD-----YRGVRMRQWGKWVS 60
           MEDPL   FQ +S +SSSS   KN            K GSD     YRGVRMRQWGKWVS
Sbjct: 1   MEDPLH-IFQFQSQSSSSSSEIKNCSKEIIKGSKKVKLGSDGKHPTYRGVRMRQWGKWVS 60

Query: 61  EIREPKKKSRIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAI 120
           EIREPKKKSRIWLGTF TPEMAARAHDVAAR IKG +A LNFPELAHRLP PA+SSPK I
Sbjct: 61  EIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGRAAFLNFPELAHRLPRPASSSPKDI 120

Query: 121 RAAAARAASF-------------SDAPSAA-------DPFFDDLPDLFLHPNRHLDTLC- 162
           RAAA +AASF             S A +AA       DPFF DLPDL L PN  ++TLC 
Sbjct: 121 RAAALQAASFDLPPESDLNRSPSSSAAAAAQSPEQDDDPFF-DLPDLLLDPNHQIETLCF 180

[Close]
BLAST of Sed0000148 vs. ExPASy TrEMBL
Match: A0A6J1L2H3 (ethylene-responsive transcription factor ERF038-like OS=Cucurbita maxima OX=3661 GN=LOC111498502 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43
Identity = 121/212 (57.08%), Postives = 131/212 (61.79%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASSSSGMK--KNPKRGSD-----YRGVRMRQWGKWVSEIREPKKKS 60
           MEDPLQ  FQ +SS+SS    K  K  K G+D     YRGVRMRQWGKWVSEIREPKKKS
Sbjct: 1   MEDPLQ-RFQFQSSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKS 60

Query: 61  RIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAAS 120
           RIWLGTF TPEMAARAHDVAAR IKG SA LNFPELAHR P PA+SS K IRAAAA+AA+
Sbjct: 61  RIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKAAT 120

Query: 121 F-----------SDAPSAA--------------------DPFFDDLPDLFLHPNRHLDTL 166
           F            DA S +                    DPFF DLPDLFLHPN  + T 
Sbjct: 121 FPINSTDEDDDDDDAASQSDRNRSPSSVAAAAKSPGEIDDPFF-DLPDLFLHPNHQIGTF 180

[Close]
BLAST of Sed0000148 vs. ExPASy TrEMBL
Match: A0A6J1FZQ3 (ethylene-responsive transcription factor ERF038-like OS=Cucurbita moschata OX=3662 GN=LOC111449391 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.8e-43
Identity = 119/209 (56.94%), Postives = 129/209 (61.72%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASS-SSGMKKNPKRGSD-----YRGVRMRQWGKWVSEIREPKKKSR 60
           MEDPLQ  FQ +SS+S       K  K G+D     YRGVRMRQWGKWVSEIREPKKKSR
Sbjct: 1   MEDPLQ-RFQFQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR 60

Query: 61  IWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAASF 120
           IWLGTF TPEMAARAHDVAAR IKG SA LNFPELAHR P PA+SS K IRAAAA+AA+F
Sbjct: 61  IWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKAATF 120

Query: 121 ---------SDAPSAA--------------------DPFFDDLPDLFLHPNRHLDTLC-- 166
                     DA S +                    DPFF DLPDLFLHPN  + T C  
Sbjct: 121 PINSTDEDDDDAASQSDRNRSPSSVAAAAKSPGEIDDPFF-DLPDLFLHPNHQIGTFCFS 180

[Close]
BLAST of Sed0000148 vs. ExPASy TrEMBL
Match: A0A5A7TD44 (Ethylene-responsive transcription factor ERF039 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00450 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.1e-42
Identity = 120/205 (58.54%), Postives = 127/205 (61.95%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASSSSGMKKN---------PKRGSD-----YRGVRMRQWGKWVSEI 60
           MEDPLQ  FQ  S +SSSS   KN          K GSD     YRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLQ-RFQFHSQSSSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRA 120
           REPKKKSRIWLGTF TPEMAARAHDVAA+ IKG SA LNFPELAHRLP PA+SSPK IRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120

Query: 121 AAARAASFSDA--PSA---------------------ADPFFDDLPDLFL-HPNRHLDTL 159
           AAA+AA F+D   P A                      D  F DLPDLF+  PN  +DT 
Sbjct: 121 AAAKAALFNDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPNHQIDTF 180

[Close]
BLAST of Sed0000148 vs. ExPASy TrEMBL
Match: A0A1S3BK05 (ethylene-responsive transcription factor ERF039 OS=Cucumis melo OX=3656 GN=LOC103490873 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.1e-42
Identity = 120/205 (58.54%), Postives = 127/205 (61.95%), Query Frame = 0 

Query: 1   MEDPLQSSFQLESSASSSSGMKKN---------PKRGSD-----YRGVRMRQWGKWVSEI 60
           MEDPLQ  FQ  S +SSSS   KN          K GSD     YRGVRMRQWGKWVSEI
Sbjct: 1   MEDPLQ-RFQFHSQSSSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQWGKWVSEI 60

Query: 61  REPKKKSRIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRA 120
           REPKKKSRIWLGTF TPEMAARAHDVAA+ IKG SA LNFPELAHRLP PA+SSPK IRA
Sbjct: 61  REPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRA 120

Query: 121 AAARAASFSDA--PSA---------------------ADPFFDDLPDLFL-HPNRHLDTL 159
           AAA+AA F+D   P A                      D  F DLPDLF+  PN  +DT 
Sbjct: 121 AAAKAALFNDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPNHQIDTF 180

[Close]
BLAST of Sed0000148 vs. TAIR 10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 81/135 (60.00%), Postives = 96/135 (71.11%), Query Frame = 0 

Query: 15  ASSSSGMKKNPKRGSDYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAA 74
           +S +   +K   +  ++RGVRMRQWGKWVSEIREP+KKSRIWLGTF TPEMAARAHDVAA
Sbjct: 24  SSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAA 83

Query: 75  RAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAASFS----DAPSA-------ADP 134
            AIKG SA LNFPELA+ LP PA++ PK I+ AAA AA+      ++PS+       AD 
Sbjct: 84  LAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAVDWKAPESPSSTVTSSPVADD 143

Query: 135 FFDDLPDLFLHPNRH 139
            F DLPDL L  N H
Sbjct: 144 AFSDLPDLLLDVNDH 158

[Close]
BLAST of Sed0000148 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 82/146 (56.16%), Postives = 95/146 (65.07%), Query Frame = 0 

Query: 30  DYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAARAIKGPSAVLNFPEL 89
           ++RGVRMRQWGKWVSEIREPKKKSRIWLGTF T EMAARAHDVAA AIKG SA LNFPEL
Sbjct: 44  NFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPEL 103

Query: 90  AHRLPLPATSSPKAIRAAAARAA----------SFSDAPS-------------AADPFFD 149
           A+ LP PA++ PK I+AAAA AA          + S +PS              +D  F 
Sbjct: 104 AYHLPRPASADPKDIQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIALSDDAFS 163

Query: 150 DLPDLFLHPNRHLDTLCFDSVFGRPF 153
           DLPDL L+ N ++D       +  PF
Sbjct: 164 DLPDLLLNVNHNIDGFWDSFPYEEPF 189

[Close]
BLAST of Sed0000148 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 2.6e-33
Identity = 78/145 (53.79%), Postives = 93/145 (64.14%), Query Frame = 0 

Query: 16  SSSSGMKKNPKRGSDYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAAR 75
           S  +  KK  +    YRGVRMR WGKWVSEIREP+KKSRIWLGTF TPEMAARAHD AA 
Sbjct: 28  SHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAAL 87

Query: 76  AIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAASFSDAPSAADPFFDDLPDLFLHP 135
            IKG SAVLNFPELA  LP PA+SSP+ ++AAAA AA+   +PS++     D   +    
Sbjct: 88  TIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPA 147

Query: 136 NRHLDTLCFDSVFGRPFSPSPESFA 161
              L +  + +      SPS E  A
Sbjct: 148 ETQLSSSSYSTCTSSSLSPSSEEAA 172

[Close]
BLAST of Sed0000148 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 9.3e-31
Identity = 73/121 (60.33%), Postives = 86/121 (71.07%), Query Frame = 0 

Query: 13  SSASSSSGMKKNPKRGSD------YRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMA 72
           S  S +   +K  KRG D      YRGVRMR WGKWVSEIREP+KKSRIWLGTFPTPEMA
Sbjct: 27  SDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMA 86

Query: 73  ARAHDVAARAIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAA------SFSDAPSA 122
           ARAHDVAA +IKG +A+LNFPELA   P P + SP+ I+ AA +AA      SFS + S+
Sbjct: 87  ARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSS 146

[Close]
BLAST of Sed0000148 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0 

Query: 16  SSSSGMKKNPKRGSDYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAAR 75
           SSS   KK   +   YRGVRMR WGKWVSEIREP+KKSRIWLGTFPT EMA RAHDVAA 
Sbjct: 4   SSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAM 63

Query: 76  AIKGPSAVLNFPELAHRLPLPATSSPKAIRAAAARAA 113
           +IKG SA+LNFPEL+  LP P + SP+ +RAAA +AA
Sbjct: 64  SIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAA 100

The following BLAST results are available for this feature:
BLAST of Sed0000148 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158471.16.9e-4459.71ethylene-responsive transcription factor ERF039 [Momordica charantia][more]
XP_023005548.12.6e-4357.08ethylene-responsive transcription factor ERF038-like [Cucurbita maxima][more]
XP_023540688.15.9e-4356.74ethylene-responsive transcription factor ERF038-like [Cucurbita pepo subsp. pepo... [more]
XP_022945031.11.0e-4256.94ethylene-responsive transcription factor ERF038-like [Cucurbita moschata] >KAG65... [more]
XP_008448820.12.2e-4258.54PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis melo] >KAA00... [more]
BLAST of Sed0000148 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SUK81.5e-3360.00Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9ZQP31.7e-3256.16Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ... [more]
O806543.7e-3253.79Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LYD31.3e-2960.33Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702... [more]
Q9M0801.7e-2969.07Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Sed0000148 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E0Z93.3e-4459.71ethylene-responsive transcription factor ERF039 OS=Momordica charantia OX=3673 G... [more]
A0A6J1L2H31.3e-4357.08ethylene-responsive transcription factor ERF038-like OS=Cucurbita maxima OX=3661... [more]
A0A6J1FZQ34.8e-4356.94ethylene-responsive transcription factor ERF038-like OS=Cucurbita moschata OX=36... [more]
A0A5A7TD441.1e-4258.54Ethylene-responsive transcription factor ERF039 OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3BK051.1e-4258.54ethylene-responsive transcription factor ERF039 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Sed0000148 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G16750.11.1e-3460.00Integrase-type DNA-binding superfamily protein [more]
AT2G35700.11.2e-3356.16ERF family protein 38 [more]
AT1G77200.12.6e-3353.79Integrase-type DNA-binding superfamily protein [more]
AT5G11590.19.3e-3160.33Integrase-type DNA-binding superfamily protein [more]
AT4G32800.11.2e-3069.07Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 53..69
score: 66.52
coord: 31..42
score: 70.15
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 30..93
e-value: 2.2E-39
score: 146.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 29..79
e-value: 7.2E-14
score: 51.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 30..87
score: 23.208761
IPR001471AP2/ERF domainCDDcd00018AP2coord: 29..89
e-value: 6.66253E-36
score: 117.373
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 30..88
e-value: 1.5E-25
score: 91.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR31985:SF5ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042coord: 12..117
NoneNo IPR availablePANTHERPTHR31985ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATEDcoord: 12..117
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 29..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0000148.1Sed0000148.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity