Sed0000128 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTTCAATACGCTCTTCCCCCCTGCAACTTCGCCGGAGAAAAACCCAAAATGTTACCGGCGACGGCGAAAAGCAACAAGATCCGGCGCATTGTTCGGCTCCGTCAAATGCTAAAGCAGTGGCACAGGAAGGCATGCCAGGCATCCTCCCGAGCGCCGCCGTCCGACGTCCCCGCCGGTCACGTCGCCGTCTGCGTCGGGAGCGGCTGCCGGCGATTCATCGTCCGCACGACCTTCCTGAACCATCCGATCTTCCAGAAGCTTCTCTCGCAGGCCGAAGAAGAGTACGGCTTCGCGACGCTCGGTCCTCTGGCGCTTCCCTGCGACGAATCGGTCTTCGAAGAGGTTCTCCGAGTCGTCGCTCGCTCCGATCTGAGTAACTCGTCGCGAAATCCGAATCTCAAGGATCTGCAGAGGCGATGCGATGAAGATGTCAGAAAGAGCCTCGAGTTTCTCGGCGAATCGAGACCTTTACTGACTGTATTCGCCGATGATAAATCCGTTTGTTGAAGCGTTCGAGTGGCCGATTCGCCGATCAGACGACTCGGAATCTCCGATTCTAGTTCCGGTAAGTCATAGTCCTTCACTTTTGCTGTAGTTTTCGGATCAAAGTGAAATTACTGGTCCTCCACCGGTCAGATTTGGCCGGAGAGACGGCCGGACGGCCAGTATCAACGGCTGATTTAGCGAGTCTTTCGGCCTGTAATCGGAATATTTTCTTAATCGCCTGTAAATGCCCTAATGAGGCCTCCATTAACATTTCTCATGTAGAATTAAAATTGCAGAC CTCTTTCAATACGCTCTTCCCCCCTGCAACTTCGCCGGAGAAAAACCCAAAATGTTACCGGCGACGGCGAAAAGCAACAAGATCCGGCGCATTGTTCGGCTCCGTCAAATGCTAAAGCAGTGGCACAGGAAGGCATGCCAGGCATCCTCCCGAGCGCCGCCGTCCGACGTCCCCGCCGGTCACGTCGCCGTCTGCGTCGGGAGCGGCTGCCGGCGATTCATCGTCCGCACGACCTTCCTGAACCATCCGATCTTCCAGAAGCTTCTCTCGCAGGCCGAAGAAGAGTACGGCTTCGCGACGCTCGGTCCTCTGGCGCTTCCCTGCGACGAATCGGTCTTCGAAGAGGTTCTCCGAGTCGTCGCTCGCTCCGATCTGAGTAACTCGTCGCGAAATCCGAATCTCAAGGATCTGCAGAGGCGATGCGATGAAGATGTCAGAAAGAGCCTCGAGTTTCTCGGCGAATCGAGACCTTTACTGACTGTATTCGCCGATGATAAATCCGTTTGTTGAAGCGTTCGAGTGGCCGATTCGCCGATCAGACGACTCGGAATCTCCGATTCTAGTTCCGGTAAGTCATAGTCCTTCACTTTTGCTGTAGTTTTCGGATCAAAGTGAAATTACTGGTCCTCCACCGGTCAGATTTGGCCGGAGAGACGGCCGGACGGCCAGTATCAACGGCTGATTTAGCGAGTCTTTCGGCCTGTAATCGGAATATTTTCTTAATCGCCTGTAAATGCCCTAATGAGGCCTCCATTAACATTTCTCATGTAGAATTAAAATTGCAGAC ATGTTACCGGCGACGGCGAAAAGCAACAAGATCCGGCGCATTGTTCGGCTCCGTCAAATGCTAAAGCAGTGGCACAGGAAGGCATGCCAGGCATCCTCCCGAGCGCCGCCGTCCGACGTCCCCGCCGGTCACGTCGCCGTCTGCGTCGGGAGCGGCTGCCGGCGATTCATCGTCCGCACGACCTTCCTGAACCATCCGATCTTCCAGAAGCTTCTCTCGCAGGCCGAAGAAGAGTACGGCTTCGCGACGCTCGGTCCTCTGGCGCTTCCCTGCGACGAATCGGTCTTCGAAGAGGTTCTCCGAGTCGTCGCTCGCTCCGATCTGAGTAACTCGTCGCGAAATCCGAATCTCAAGGATCTGCAGAGGCGATGCGATGAAGATGTCAGAAAGAGCCTCGAGTTTCTCGGCGAATCGAGACCTTTACTGACTGTATTCGCCGATGATAAATCCGTTTGTTGA MLPATAKSNKIRRIVRLRQMLKQWHRKACQASSRAPPSDVPAGHVAVCVGSGCRRFIVRTTFLNHPIFQKLLSQAEEEYGFATLGPLALPCDESVFEEVLRVVARSDLSNSSRNPNLKDLQRRCDEDVRKSLEFLGESRPLLTVFADDKSVC Homology
BLAST of Sed0000128 vs. NCBI nr
Match: XP_038902037.1 (auxin-responsive protein SAUR71-like [Benincasa hispida]) HSP 1 Score: 253.8 bits (647), Expect = 9.2e-64 Identity = 128/149 (85.91%), Postives = 137/149 (91.95%), Query Frame = 0
BLAST of Sed0000128 vs. NCBI nr
Match: XP_004147056.1 (auxin-induced protein X10A [Cucumis sativus]) HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61 Identity = 124/153 (81.05%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of Sed0000128 vs. NCBI nr
Match: XP_008457620.1 (PREDICTED: auxin-responsive protein SAUR64 [Cucumis melo]) HSP 1 Score: 245.0 bits (624), Expect = 4.3e-61 Identity = 123/153 (80.39%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Sed0000128 vs. NCBI nr
Match: KAA0045662.1 (auxin-responsive protein SAUR64 [Cucumis melo var. makuwa] >TYK02600.1 auxin-responsive protein SAUR64 [Cucumis melo var. makuwa]) HSP 1 Score: 245.0 bits (624), Expect = 4.3e-61 Identity = 123/153 (80.39%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Sed0000128 vs. NCBI nr
Match: XP_023006979.1 (auxin-responsive protein SAUR71-like [Cucurbita maxima]) HSP 1 Score: 241.9 bits (616), Expect = 3.6e-60 Identity = 120/148 (81.08%), Postives = 129/148 (87.16%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11 Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-11 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-11 Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.2e-11 Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.4e-11 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy TrEMBL
Match: A0A0A0LM48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=3 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 124/153 (81.05%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy TrEMBL
Match: A0A5A7TQK8 (Auxin-responsive protein SAUR64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00010 PE=3 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 2.1e-61 Identity = 123/153 (80.39%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy TrEMBL
Match: A0A1S3C5H3 (auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=3 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 2.1e-61 Identity = 123/153 (80.39%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy TrEMBL
Match: A0A6J1L3P0 (auxin-responsive protein SAUR71-like OS=Cucurbita maxima OX=3661 GN=LOC111499611 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60 Identity = 120/148 (81.08%), Postives = 129/148 (87.16%), Query Frame = 0
BLAST of Sed0000128 vs. ExPASy TrEMBL
Match: A0A6J1G6T1 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111451389 PE=3 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59 Identity = 121/152 (79.61%), Postives = 129/152 (84.87%), Query Frame = 0
BLAST of Sed0000128 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 161.8 bits (408), Expect = 4.4e-40 Identity = 85/145 (58.62%), Postives = 106/145 (73.10%), Query Frame = 0
BLAST of Sed0000128 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 151.4 bits (381), Expect = 6.0e-37 Identity = 79/145 (54.48%), Postives = 99/145 (68.28%), Query Frame = 0
BLAST of Sed0000128 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 146.0 bits (367), Expect = 2.5e-35 Identity = 81/152 (53.29%), Postives = 107/152 (70.39%), Query Frame = 0
BLAST of Sed0000128 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 146.0 bits (367), Expect = 2.5e-35 Identity = 81/152 (53.29%), Postives = 107/152 (70.39%), Query Frame = 0
BLAST of Sed0000128 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34 Identity = 77/143 (53.85%), Postives = 95/143 (66.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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