Sed0000118 (gene) Chayote v1

Overview
NameSed0000118
Typegene
OrganismSechium edule (Chayote v1)
Descriptiondiphthamide biosynthesis protein 3-like
LocationLG10: 37154570 .. 37157195 (-)
RNA-Seq ExpressionSed0000118
SyntenySed0000118
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAGCCTAATTTTGACGCAGTCTCGAAAATCCTAAACCCTAGCCCTTCCGCAATCCCACCACCAAAATCGCCGGTTGCAGACTTGCCGTCGCCGTCGTCGTCGCCGCCGAGCCGGTCGAATCCACCGGAGAAACGATGTCGTACGACGACGTTGAGATCGAAGACATGGAATGGAACGAGGAGCTGCAGTCGTTCACGTATCCATGCCCCTGCGGCGACTTGTTCCAGATCACGAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACCGTCATCTACAACATGGAAGATTTTCAAGGAGATTCTGATCAGAACCGTAACAAAGGACTCGAGCCCTCTAAGCAACCGCCCATCGTCGTCGCTTAAGAATTCAGGTTCTTAATTCATTCAACTTTTTTGGACTTGTTTTATTGATTGAGGCGATTCCTTTTTACCTTGTTCATATTCTGATATACCGATTCTATAATTTTATTTGGGGATTGAAAGATTTTTGAGTCTGAACCTGGTGTTTCTTCGGGTTTTAGAATTTAGAAGGTCATGAATTGGTTTGTGTGATTGGAAAAATAGAATATGATTTCACTCGGTTTGTTGTGTAGCTTAGTTTTACATATACGATAGCCGTTTAGAATTCTGGCAGGCTTAGCTTTACCATGATAGGATTTTCAATTGGTTTGTCTTCTATTCTCTGTGGTAAATCGTTCAGAGATAAGTTTGTGGGAATGAATACTTTTTTTCTTGAAGCATTATGCGGGTGTGTTTGTTTGTGTTCATCAAGTCTTAAAAGGATTCATCAGTGTTTCAAAAGGCTCACCTGGGCGCCCGTCTAGACTCAAGATGCTGGTCTTGCAGCCCCGCCTTTAAACGAGGCTTAAGCCAAAAGTTGAACTCTAGGCGTGTGCCTTCCTATGAAGCCATGAGGCATCAAGCCTTAGAACTTCTTGATTACTTATAAAAATATTATGTTAACTAATTGTAAACACAAAAAATCTTATGTTTATAGTTTATTTTTAAAAAAAGAAGAGGTAGCATAGATGGGGTGAGAACATAACTATGCTATCTCTCCTTTGTCAATGTTCTTATATGTATAGTACTCATGAAAAAAGTATGTGCCTTTTCTTATGTCACACTTAAGTCTTAGGAGGCTATCGCACCCTACTCCTCAGTGCCTTTTAGCTTTTAAAAACGTTGGATTTACCATTTGAGGATATCTTTTTGGTCTTTTAGGTTTAATGAGTAGCCTTCAACTTCTCCATTTTTGTTAATGGTGAATGTTAATCTAGAGGGAAGCTTTTTGTTCCCAAGGGATGGTCCGGTGGTCGAAGACTTGGGCTTTGAAAGTGCGTTTCTCTCAAGATCTCAAATTCAAGACTCACCAGTCACCTGTGACATTAATTTGTAGACACTTCCCGTGTCTCCATTTCTTTGATGTCTCTCGGTGCTTGGCCTAGGAACGGACGCGGTTACCTCGAGTATAGTGGAGCAAAGCTCCGATTTTCCGGTTTTCAAAAAAAATAAATTTTAGAGGGAAGCCTTTTGCTTTTAGGGGTCATGGCAAGGAGATGTCCTCTCCCCCTTTCTTTTCACCTTAGTTGTGGATGTTCTGATTAGGCTTGTGTTCGTGGGTGTTAATGGGTTCAGATGGGAAAGAAGTTAGTTCACTTGTCTCATCTCCCGCTTGCTGATACGTTTTCTTCTCCGGTAAGGACGAGACCATTCCTCTGTCACTGTGTAGACCCTTAGCTTTAGCGTGAACTTTTTAACATCGTTGTTCAACATTGACTAGAAAGTGATTATGATGAAGTGGACAACCTTCAACCATGTTCTTTGTTGTCTACCGCTCCATATCAATCCCCAGAGTATTCCAATTCGTCTATAAGAATACTTTTTGTCTATAAAATTTTGTTCCAGCTTTATATGGATGTTCATTTTTTGCAGAGAGCTCGATTATGAATCATGGTGTCATCACGGCAGCAGATGAAATTTTGTCAGCCTGAGATGTTTGTGTTGCATGTGCAAAATTACATTAAAGTACTATTTTTGTTCCATCAAAAGTAATTTAGAGTCTTGATCTTTTTTTTGACATGCTATCTTTGGTCGAACCCTACCCCTATCTCCATGATGTGATAAAGGGAGAACTTTTAGACATAAGAATTAAACCCTCGTTTGATAACCATTTTGTCGTAGGTTTTTCCTTACGTGAAAATCTACATCTTACCTATATTTTAAGAAACCATACCAAAATGTGGAAACAAAAAAAAGCTTCCAAAGTTTGTTTTTGTCTTTGAAATTTTGTTAGCATTCATATACTTTCTTAAGAAAGATGGAGGAAATTTGAGTAAAAATAAGATTAAATTTCAAAAGCAAAATGGTTATTAGACGGGGTTTAAGATATGGTAACCTTAACTATATAATTTAATCTTTTGATTGAAATATTTTAATAGTTTTTCTGTTTTTATTTGTCTTTCTTAGCCCTTCTTGTTTGTGTATGAAAACTTCATGATACTAACTTGTTTAGTTATTAAGATTGTAAGATGGATTGATCCATGTGTTTGAACTCATCGATTTTTGAAGATCGATGGGAGGAGATGTTGAAGAC

mRNA sequence

AAGAAAGCCTAATTTTGACGCAGTCTCGAAAATCCTAAACCCTAGCCCTTCCGCAATCCCACCACCAAAATCGCCGGTTGCAGACTTGCCGTCGCCGTCGTCGTCGCCGCCGAGCCGGTCGAATCCACCGGAGAAACGATGTCGTACGACGACGTTGAGATCGAAGACATGGAATGGAACGAGGAGCTGCAGTCGTTCACGTATCCATGCCCCTGCGGCGACTTGTTCCAGATCACGAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACCGTCATCTACAACATGGAAGATTTTCAAGGAGATTCTGATCAGAACCGTAACAAAGGACTCGAGCCCTCTAAGCAACCGCCCATCGTCGTCGCTTAAGAATTCAGAGAGCTCGATTATGAATCATGGTGTCATCACGGCAGCAGATGAAATTTTGTCAGCCTGAGATGTTTGTGTTGCATGTGCAAAATTACATTAAAGTACTATTTTTGTTCCATCAAAAGTAATTTAGAGTCTTGATCTTTTTTTTGACATGCTATCTTTGGTCGAACCCTACCCCTATCTCCATGATGTGATAAAGGGAGAACTTTTAGACATAAGAATTAAACCCTCGTTTGATAACCATTTTGTCGTAGGTTTTTCCTTACGTGAAAATCTACATCTTACCTATATTTTAAGAAACCATACCAAAATGTGGAAACAAAAAAAAGCTTCCAAAGTTTGTTTTTGTCTTTGAAATTTTGTTAGCATTCATATACTTTCTTAAGAAAGATGGAGGAAATTTGAGTAAAAATAAGATTAAATTTCAAAAGCAAAATGGTTATTAGACGGGGTTTAAGATATGGTAACCTTAACTATATAATTTAATCTTTTGATTGAAATATTTTAATAGTTTTTCTGTTTTTATTTGTCTTTCTTAGCCCTTCTTGTTTGTGTATGAAAACTTCATGATACTAACTTGTTTAGTTATTAAGATTGTAAGATGGATTGATCCATGTGTTTGAACTCATCGATTTTTGAAGATCGATGGGAGGAGATGTTGAAGAC

Coding sequence (CDS)

ATGTCGTACGACGACGTTGAGATCGAAGACATGGAATGGAACGAGGAGCTGCAGTCGTTCACGTATCCATGCCCCTGCGGCGACTTGTTCCAGATCACGAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACCGTCATCTACAACATGGAAGATTTTCAAGGAGATTCTGATCAGAACCGTAACAAAGGACTCGAGCCCTCTAAGCAACCGCCCATCGTCGTCGCTTAA

Protein sequence

MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDFQGDSDQNRNKGLEPSKQPPIVVA
Homology
[Close]
BLAST of Sed0000118 vs. NCBI nr
Match: XP_038887330.1 (diphthamide biosynthesis protein 3-like [Benincasa hispida] >XP_038887331.1 diphthamide biosynthesis protein 3-like [Benincasa hispida])

HSP 1 Score: 172.9 bits (437), Expect = 1.2e-39
Identity = 79/85 (92.94%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQ+FTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF GDS+Q  NKGLEPSKQ PIVVA
Sbjct: 61 DFLGDSNQKNNKGLEPSKQQPIVVA 85

[Close]
BLAST of Sed0000118 vs. NCBI nr
Match: XP_022972367.1 (diphthamide biosynthesis protein 3-like [Cucurbita maxima])

HSP 1 Score: 171.8 bits (434), Expect = 2.6e-39
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQ+FTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF GDSD   NKGL+PSKQ PIVVA
Sbjct: 61 DFLGDSDHKNNKGLQPSKQQPIVVA 85

[Close]
BLAST of Sed0000118 vs. NCBI nr
Match: XP_022136247.1 (diphthamide biosynthesis protein 3-like [Momordica charantia])

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-38
Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQ++TYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNQELQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF GDSDQ  NKG++PSKQ PIVVA
Sbjct: 61 DFLGDSDQKNNKGIQPSKQQPIVVA 85

[Close]
BLAST of Sed0000118 vs. NCBI nr
Match: XP_008454889.1 (PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890.1 PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >KAA0031262.1 diphthamide biosynthesis protein 3-like [Cucumis melo var. makuwa] >TYK06714.1 diphthamide biosynthesis protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 2.2e-38
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQ+FTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF  DS+Q  NKGLEPSKQ PIVVA
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIVVA 85

[Close]
BLAST of Sed0000118 vs. NCBI nr
Match: OVA13807.1 (zinc finger protein [Macleaya cordata])

HSP 1 Score: 167.2 bits (422), Expect = 6.3e-38
Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQ+FTYPCPCGDLFQITKE+LK+GEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEELKIGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF GDSD+N  K LEPSKQ P+ VA
Sbjct: 61 DFMGDSDRNSKKNLEPSKQQPVAVA 85

[Close]
BLAST of Sed0000118 vs. ExPASy Swiss-Prot
Match: Q9VGQ9 (DPH3 homolog OS=Drosophila melanogaster OX=7227 GN=CG14701 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.4e-18
Identity = 39/66 (59.09%), Postives = 52/66 (78.79%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED E++EE + + YPCPCGD FQI+KE+L  GEE+A CPSCSL I VIY+ E F
Sbjct: 5  HDEVEIEDFEYDEEEEMYYYPCPCGDRFQISKEELIEGEEVATCPSCSLVIKVIYDPEMF 64

Query: 63 QGDSDQ 69
          + + D+
Sbjct: 65 KAEEDE 70

[Close]
BLAST of Sed0000118 vs. ExPASy Swiss-Prot
Match: Q74Z32 (Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-17
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD+VEIEDM ++ + Q FTYPCPCGD FQI+ +D+  GE+IA CPSCSL I V+Y + D 
Sbjct: 4  YDEVEIEDMTFDPDTQLFTYPCPCGDRFQISIDDMCDGEDIAVCPSCSLMIKVVYELHDL 63

Query: 63 QGDSDQNRNKGLEP 77
          Q   D+    G+EP
Sbjct: 64 QEYYDE---AGVEP 74

[Close]
BLAST of Sed0000118 vs. ExPASy Swiss-Prot
Match: Q4P8G2 (Diphthamide biosynthesis protein 3 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.9e-17
Identity = 36/67 (53.73%), Postives = 52/67 (77.61%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD++E+EDM +++E   F YPCPCGD F+IT++ LK  E++ARCPSCSL I V+++  DF
Sbjct: 6  YDEIELEDMSYDDEKDVFHYPCPCGDRFEITRQQLKDAEDVARCPSCSLIIRVVFDPIDF 65

Query: 63 Q-GDSDQ 69
          + GD D+
Sbjct: 66 EDGDEDE 72

[Close]
BLAST of Sed0000118 vs. ExPASy Swiss-Prot
Match: Q21102 (DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-17
Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED E++EE   + YPCPCGD F+I +E L++GE++A+CPSCSL I VIY+ EDF
Sbjct: 5  HDEVEIEDFEFDEEKDVYHYPCPCGDRFEIPREMLEMGEDVAQCPSCSLLIRVIYDPEDF 64

[Close]
BLAST of Sed0000118 vs. ExPASy Swiss-Prot
Match: Q6VUC1 (DPH3 homolog OS=Cricetulus griseus OX=10029 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.9e-17
Identity = 35/60 (58.33%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 3  YDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED +++E+ +++ YPCPCGD F ITKEDL+ GE++A CPSCSL I VIY+ + F
Sbjct: 5  HDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDKDQF 64

[Close]
BLAST of Sed0000118 vs. ExPASy TrEMBL
Match: A0A6J1I4L9 (diphthamide biosynthesis protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111470942 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQ+FTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF GDSD   NKGL+PSKQ PIVVA
Sbjct: 61 DFLGDSDHKNNKGLQPSKQQPIVVA 85

[Close]
BLAST of Sed0000118 vs. ExPASy TrEMBL
Match: A0A6J1C519 (diphthamide biosynthesis protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007992 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39
Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQ++TYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNQELQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF GDSDQ  NKG++PSKQ PIVVA
Sbjct: 61 DFLGDSDQKNNKGIQPSKQQPIVVA 85

[Close]
BLAST of Sed0000118 vs. ExPASy TrEMBL
Match: A0A1S3BZL5 (diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQ+FTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF  DS+Q  NKGLEPSKQ PIVVA
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIVVA 85

[Close]
BLAST of Sed0000118 vs. ExPASy TrEMBL
Match: A0A5A7SJN1 (Diphthamide biosynthesis protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00150 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQ+FTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF  DS+Q  NKGLEPSKQ PIVVA
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIVVA 85

[Close]
BLAST of Sed0000118 vs. ExPASy TrEMBL
Match: A0A200QTM0 (Zinc finger protein OS=Macleaya cordata OX=56857 GN=BVC80_1769g68 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-38
Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQ+FTYPCPCGDLFQITKE+LK+GEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEELKIGEEIARCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DF GDSD+N  K LEPSKQ P+ VA
Sbjct: 61 DFMGDSDRNSKKNLEPSKQQPVAVA 85

[Close]
BLAST of Sed0000118 vs. TAIR 10
Match: AT2G15910.2 (CSL zinc finger domain-containing protein )

HSP 1 Score: 145.2 bits (365), Expect = 2.4e-35
Identity = 65/85 (76.47%), Postives = 73/85 (85.88%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEE+Q++TYPCPCGDLFQITKEDL+LGEEIA CPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEEIQAYTYPCPCGDLFQITKEDLRLGEEIANCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPIVVA 86
          DFQ D+ +N     EP  + P+ VA
Sbjct: 61 DFQNDTKKNN----EPKTRHPVAVA 81

[Close]
BLAST of Sed0000118 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 141.4 bits (355), Expect = 3.5e-34
Identity = 63/82 (76.83%), Postives = 71/82 (86.59%), Query Frame = 0 

Query: 1  MSYDDVEIEDMEWNEELQSFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEE+Q++TYPCPCGDLFQITKEDL+LGEEIA CPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEEIQAYTYPCPCGDLFQITKEDLRLGEEIANCPSCSLYITVIYNME 60

Query: 61 DFQGDSDQNRNKGLEPSKQPPI 83
          DFQ D+ +N     EP  + P+
Sbjct: 61 DFQNDTKKNN----EPKTRHPV 78

The following BLAST results are available for this feature:
BLAST of Sed0000118 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887330.11.2e-3992.94diphthamide biosynthesis protein 3-like [Benincasa hispida] >XP_038887331.1 diph... [more]
XP_022972367.12.6e-3991.76diphthamide biosynthesis protein 3-like [Cucurbita maxima][more]
XP_022136247.11.3e-3888.24diphthamide biosynthesis protein 3-like [Momordica charantia][more]
XP_008454889.12.2e-3890.59PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890.... [more]
OVA13807.16.3e-3887.06zinc finger protein [Macleaya cordata][more]
BLAST of Sed0000118 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9VGQ93.4e-1859.09DPH3 homolog OS=Drosophila melanogaster OX=7227 GN=CG14701 PE=3 SV=1[more]
Q74Z322.2e-1755.41Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 1... [more]
Q4P8G22.9e-1753.73Diphthamide biosynthesis protein 3 OS=Ustilago maydis (strain 521 / FGSC 9021) O... [more]
Q211024.9e-1760.00DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1[more]
Q6VUC14.9e-1758.33DPH3 homolog OS=Cricetulus griseus OX=10029 GN=DPH3 PE=3 SV=1[more]
BLAST of Sed0000118 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I4L91.2e-3991.76diphthamide biosynthesis protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111470... [more]
A0A6J1C5196.2e-3988.24diphthamide biosynthesis protein 3-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A1S3BZL51.1e-3890.59diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 ... [more]
A0A5A7SJN11.1e-3890.59Diphthamide biosynthesis protein 3-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A200QTM03.1e-3887.06Zinc finger protein OS=Macleaya cordata OX=56857 GN=BVC80_1769g68 PE=4 SV=1[more]
BLAST of Sed0000118 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G15910.22.4e-3576.47CSL zinc finger domain-containing protein [more]
AT2G15910.13.5e-3476.83CSL zinc finger domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007872DPH-type metal-binding domainPFAMPF05207zf-CSLcoord: 4..58
e-value: 1.6E-22
score: 78.9
IPR007872DPH-type metal-binding domainPROSITEPS51074DPH_MBcoord: 2..58
score: 23.482386
IPR036671DPH-type metal-binding domain superfamilyGENE3D3.10.660.10DPH Zinc fingercoord: 1..80
e-value: 5.7E-30
score: 104.9
IPR036671DPH-type metal-binding domain superfamilySUPERFAMILY144217CSL zinc fingercoord: 2..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..85
NoneNo IPR availablePANTHERPTHR21454:SF2DPH3 HOMOLOGcoord: 2..72
IPR044248Diphthamide biosynthesis protein 3/4-likePANTHERPTHR21454DPH3 HOMOLOG-RELATEDcoord: 2..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0000118.1Sed0000118.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process GO:0002098 tRNA wobble uridine modification
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding