Sed0000093 (gene) Chayote v1

Overview


Name	Sed0000093
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nuclear transcription factor Y subunit
Location	LG02: 41630257 .. 41634676 (-)
RNA-Seq Expression	Sed0000093
Synteny	Sed0000093

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCCTATCAAATGGGGTTCCTATGCCTCTTTCCACCACCTGCTCTTGCTCTTTCTTCTTCTTCTCCTCCAACTTTTTGCTAATCTTTTGAATTTGTGAGTACTTTTTTCACCCTTTTCCTTTTTTGCCCTTTTCTTCTGTCTCTACTCTGCTTTCTTGTTTGAGACTTTTTTCATCTGGGTATGTTTATTTCTTTCTCCCTTTGATTTCTTGTAATAGTTGTATTGGTTTCTTCAATCTCCTTCTTTTGTCTATTTGTGTATGTTGTTATTGTTTTGTTGTTTAGTGATTTAAGGTTGTTCTTTGTTTTTTTTTTTTTACCCTTTTGAAGTGGCTATTCATCTTCTTCTCTTATATGAGCTTTCAATTTGCTTGACTTCTCTTTTCCCCCCTTTTTGATTTCATTTGATAGGCTTATTGAGGTTTAGACCTATTGAAATGTGTTTTTGTGCTGAATTTGAAGTCTCTATCTCTGGATTGTAGGAACTTGTGTGAAAGATTATAAGGTTTCTTTGTGATTTTGATTGTTGGAAAAATGGCTCCACAAACTGGCTTTTTGAAAGAACATGAAGGAATTGTCCCCAACTTTCTTGGCCAGTTATCTTCTGCTTCTCCTGCTCGTCTGTGGAGTCCCTTTGGGCTTGGTTCCCAATCTGTTTTTGGGGATTTTGGTCAGCTCAAGGCTTCCTCCATTGAAGGGAAGGAGTTTTCTGCTACCAAACAAGCTGCCCCGGTTGGGGTTCCGGGTTTCGAGAAAGTTAACACAGCTCCATTTTCTATCTATCCTGGTAACTTTTTGTTTCTTTGCTTCATTTTCATTCCCTATGATCATATCTTTTATTTCGAGTTAAACAACAATTGGGAGTGAAGGGATTCGAATTTCGAACTTGTAATCTTTTGGTTTTTGGGTCGTACATGATGCCACGGGAATTCTACTCCTTTTGGCATTCCCATGATCCTAGTCGGTTGGTTATGTAGTGTCTCTCTTTAGATTACATGAAAGCTCTCTTTTCTAATTCTTAGGATGTAGTATTTGATGTAGAAGCCTTCTTTGTCTTCCAAGCAATTTACTTACAAAAGGAAGATGCATAGCACTAGTTGAAAGTTGACCTTATGTAGGAAGTTGGTATTTGAAAGTTTGATGGTTTCTTATTCTTATTCTTTCAATGACCTAAGATGATAAATAGTATAAGCAAAACTTGAGCTGAGTTGCTCGTAAATGGTGGGTGTACCGGTTAACGAGTGAGTCAGTGACTGTGTTTCAGTTGTTCAACATTTCAATCATTTCCTTAGTACTAAAAAAAATAGAGGTGACAGAAGATTGGTTATTCACACAATTGATTGGTTCCCTGAAAATGAATAGCATAGGGAGATTCATGGAGAAGTTGAATAGTTTTTTCTGACATGTAGCTTGCATATGCTCTGAGGTACTGCTATTCATTGAGTGATAGCGCACCCTAGTGTTTATAAGAGGAAACATGTTAGCGGGGGAGGGACGTAGATTGTTTGTGTCGATCAGCTTGACTCATAGCTTAGTACTGTGACGTTGGGGACGGGGGAATTCGTGAGGAAGGGAGCATATAAAATGAAAGTGTATTGAGAGGGTATGCTATTACTGTGTTGAGTTCACTTAGGCTGGTGGGCAGGCAGCCTTTGGCCCTTTGGACATCTTCAAGCTTGTATCCTCATTGTGAATAAAATTTATAAAGTTCTATCCAAGAGTAATTTCTAAGAAATTCCCAACTTCCATGTGGATTTAGTAGAAATGAAATGACATGCATCCAAATGTACAGTAAAGATTTGAAAGTCAAGTGCAGTTCTGTTGTTCAATTTATGTCTGAATCATCTACTGTTGAAGTACACTCTTTGTAACATAGAAGCACTACTGCTTTTCTTTTGTGCATTCTATTAAGTAATTGGATCAATTTTCCTTGACTAATACTCTACCATCTCTTCTTCAAATCATCATTTTCTTATTGCTTCATCTAGGGCAAGATAAATTTTTTTTTTCTAACTCTTGGTTCATAAAACCATCATGAATTGGTCTAGTGGTCAAATAAGACCCTTGAAATTCAATAAATATTTAGAGGCTAATCTATGGTAGCCACCCACTTACCTAAGAATTAATTTCCTACGAGTTTCCTTCATCACCAAATGTAATAGGGTCAAGCAGTTGTCTCGTGAGAAAGCTAAAGTGTGCGTAAGTTGACCCGGACACACACATGTCATAACCGTGGACCCATAAGTTAAAATCTCAATGTTTTTTAAACAAGGAAAGAAAGGAGTATGAAACTCAAGAAAATACTTTTTCTTTTCCTCTTTTTGTGCTTGCTTTGTTAAAATGCCAATCATAATGGTGAACTTTCTATCCTTCTCTGATGAGTAATTTTCTCTTAAAAAATCCAAGCAGGTGACACTAAGAACTCTGTGGATGCACAAAAACCTTCAGTTTTTTCCCTTCAATCACCTGGGTCAGAATATCACACTCGTTTTGAGCTCGGATTTGGTCAGCCTGTGGTAGGATCTTAAATGCCAATTGAATTTTTCTACAACAATGCTATTTGTTTATATCATATCTCTGATTCTGAAAACAAAATATGTAGTTATGTGCAAATTATCCATATATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGTATGTTTCCTTCCATTCTTCAACTACTTCCTTTTTACCTTCTTTTTTTTTTCGTGTACGTATTCGATGTGAATCAACTTTTTTTCTAAAATGTTTTCCAACAAAAAAATAGGCGAATTTTGTTTTGGCCGACTCGACGCACTTCCATCTAGAACAAATGAAAGAGTACAAGGGGAGTACCAAAAAAATAACCAATTCTTTGAGGAGCCCAATTAGCTCAAGATAAGTAAAGGTGAAACTCTGTTAGCTAGCTGCTTAGGGTGAGAATGGGAAATGGACAACAATACAATGTAGCCAAAAACAAGAGATAGGCCAACAAGATGGTGCCTCTTTTGGGTTCACCAAACTTGAATCAGATCTTAATTTCATTTTCATTGGACCTAATACGTGTTTGGGCTTGGCTTAATGAACTCTGATACTATATTTGATAGTGTGGACATCCATCTCAAAACCAATTGGTGATGAGAGTAGTCTGCCTTTCTTATATATTGTTACGAGGTCTCCACTCTTTTTGATGTTGGATCCTAACAAGAGATAAGTAATGTTTTTCAATAATACATTTGTTGGTTGGTTTCTGCTGTTCATTGTAAGCTATCTGGATTAGGCCACTCTGGCCTATCTATTATTCGCAAAGACTTAACCATTTGCGATAATCAGGGCCGGATTATGCTGCCAATGAGCTTAACAACAGATGATGGACCAATTTACGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATCCGCTCTAAGGCAATGATGAAGAATCGACTCGCAAGAACTCGTAAGGTATGCAAGTGTAAGTCTTACTGATGTGTTTCTCCTAACTTTAAACACTTAAATATGATATACTAGCCAGTATCATGTTACTTCTGTACGATCAAACTGTTGATATATATTGCACATCTTGCAGCCATATATGCATGAATCGCGCCATCTCCATGCAATGCGTCGTCCACGGGGATCTGGTGGCCGATTCTTGAACACGAAGAATCTGAAAAATGGGAAAGATTTTGTGGAACCGAAGAAAGTCAATGATATCAATCTTTCTGATTCAACAACTGGTTCTCAATGTTCTGTGGTTCTCCAAAACTCCCCAAATGAAGGCAAGGTTGGGAGAGGCTTTAATCTCTCGAACTCCGAGATATCGAGCATGTTCCAGAGAGGGCTGCAGCGTTTTCAAATCAACCATCTTGGACCACCAATGCAGTCACTGGCAGAGATCATTGATGGGGGAGGGCATGGCATGGTTCTCCCCAAATGGATTGCAGCAGCTGACAACTGCTGCAATCTTTATGTTTGACGGCGAAGGCGAAGGGTTTTGGTGCAATGACTTGCACCAAAACCCATCTTCGATGCGACCAAATACAGCTTGCTGCAATGTCGTCGTCGTCGTCTGCGATGGCAATTGTTTCAAGCTTTGCGATGAGGATAGTCCTGCGTTTGGTTGCAATGGCAAGTCATTTTTGGCTCGGATGTCTCTTATCTCTCCGTATCCCTTTTCGGGCGGAGAGAAACAAATGATTCATCCAATCAGATAGGTTACCCAGTATGAAGTAATTGGCAGTAGACAAGAAAAAGGTTTGTTGAAGAATAAGAGCATCAAAAGTATGAATTCAACAGTGTTTATGTAAACAAAGTAAGACAAGAAGAATGTTTATGAAGTTCAGTGTGTTTGGTTGTTCAAATTCAGACATTGAAAAGCAATTTGTTCTGTGAACAAAGATGCTTTGGCTTAT

mRNA sequence

GCTCCTATCAAATGGGGTTCCTATGCCTCTTTCCACCACCTGCTCTTGCTCTTTCTTCTTCTTCTCCTCCAACTTTTTGCTAATCTTTTGAATTTGAACTTGTGTGAAAGATTATAAGGTTTCTTTGTGATTTTGATTGTTGGAAAAATGGCTCCACAAACTGGCTTTTTGAAAGAACATGAAGGAATTGTCCCCAACTTTCTTGGCCAGTTATCTTCTGCTTCTCCTGCTCGTCTGTGGAGTCCCTTTGGGCTTGGTTCCCAATCTGTTTTTGGGGATTTTGGTCAGCTCAAGGCTTCCTCCATTGAAGGGAAGGAGTTTTCTGCTACCAAACAAGCTGCCCCGGTTGGGGTTCCGGGTTTCGAGAAAGTTAACACAGCTCCATTTTCTATCTATCCTGGTGACACTAAGAACTCTGTGGATGCACAAAAACCTTCAGTTTTTTCCCTTCAATCACCTGGGTCAGAATATCACACTCGTTTTGAGCTCGGATTTGGTCAGCCTGTGTTATGTGCAAATTATCCATATATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGCCGGATTATGCTGCCAATGAGCTTAACAACAGATGATGGACCAATTTACGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATCCGCTCTAAGGCAATGATGAAGAATCGACTCGCAAGAACTCGTAAGCCATATATGCATGAATCGCGCCATCTCCATGCAATGCGTCGTCCACGGGGATCTGGTGGCCGATTCTTGAACACGAAGAATCTGAAAAATGGGAAAGATTTTGTGGAACCGAAGAAAGTCAATGATATCAATCTTTCTGATTCAACAACTGGTTCTCAATGTTCTGTGGTTCTCCAAAACTCCCCAAATGAAGGCAAGGTTGGGAGAGGCTTTAATCTCTCGAACTCCGAGATATCGAGCATGTTCCAGAGAGGGCTGCAGCGTTTTCAAATCAACCATCTTGGACCACCAATGCAGTCACTGGCAGAGATCATTGATGGGGGAGGGCATGGCATGGTTCTCCCCAAATGGATTGCAGCAGCTGACAACTGCTGCAATCTTTATGTTTGACGGCGAAGGCGAAGGGTTTTGGTGCAATGACTTGCACCAAAACCCATCTTCGATGCGACCAAATACAGCTTGCTGCAATGTCGTCGTCGTCGTCTGCGATGGCAATTGTTTCAAGCTTTGCGATGAGGATAGTCCTGCGTTTGGTTGCAATGGCAAGTCATTTTTGGCTCGGATGTCTCTTATCTCTCCGTATCCCTTTTCGGGCGGAGAGAAACAAATGATTCATCCAATCAGATAGGTTACCCAGTATGAAGTAATTGGCAGTAGACAAGAAAAAGGTTTGTTGAAGAATAAGAGCATCAAAAGTATGAATTCAACAGTGTTTATGTAAACAAAGTAAGACAAGAAGAATGTTTATGAAGTTCAGTGTGTTTGGTTGTTCAAATTCAGACATTGAAAAGCAATTTGTTCTGTGAACAAAGATGCTTTGGCTTAT

Coding sequence (CDS)

ATGGCTCCACAAACTGGCTTTTTGAAAGAACATGAAGGAATTGTCCCCAACTTTCTTGGCCAGTTATCTTCTGCTTCTCCTGCTCGTCTGTGGAGTCCCTTTGGGCTTGGTTCCCAATCTGTTTTTGGGGATTTTGGTCAGCTCAAGGCTTCCTCCATTGAAGGGAAGGAGTTTTCTGCTACCAAACAAGCTGCCCCGGTTGGGGTTCCGGGTTTCGAGAAAGTTAACACAGCTCCATTTTCTATCTATCCTGGTGACACTAAGAACTCTGTGGATGCACAAAAACCTTCAGTTTTTTCCCTTCAATCACCTGGGTCAGAATATCACACTCGTTTTGAGCTCGGATTTGGTCAGCCTGTGTTATGTGCAAATTATCCATATATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGCCGGATTATGCTGCCAATGAGCTTAACAACAGATGATGGACCAATTTACGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATCCGCTCTAAGGCAATGATGAAGAATCGACTCGCAAGAACTCGTAAGCCATATATGCATGAATCGCGCCATCTCCATGCAATGCGTCGTCCACGGGGATCTGGTGGCCGATTCTTGAACACGAAGAATCTGAAAAATGGGAAAGATTTTGTGGAACCGAAGAAAGTCAATGATATCAATCTTTCTGATTCAACAACTGGTTCTCAATGTTCTGTGGTTCTCCAAAACTCCCCAAATGAAGGCAAGGTTGGGAGAGGCTTTAATCTCTCGAACTCCGAGATATCGAGCATGTTCCAGAGAGGGCTGCAGCGTTTTCAAATCAACCATCTTGGACCACCAATGCAGTCACTGGCAGAGATCATTGATGGGGGAGGGCATGGCATGGTTCTCCCCAAATGGATTGCAGCAGCTGACAACTGCTGCAATCTTTATGTTTGA

Protein sequence

MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSIEGKEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPSVFSLQSPGSEYHTRFELGFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINLSDSTTGSQCSVVLQNSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPMQSLAEIIDGGGHGMVLPKWIAAADNCCNLYV

Homology

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BLAST of Sed0000093 vs. NCBI nr
Match: XP_022151376.1 (nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377.1 nuclear transcription factor Y subunit A-10 [Momordica charantia])

HSP 1 Score: 535.8 bits (1379), Expect = 2.5e-148
Identity = 276/331 (83.38%), Postives = 295/331 (89.12%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSIE-----G 60
           MAPQTG+LKEHEGIVPN LGQLSS SPARLWS FG GSQ++FGDFGQLKASSIE     G
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSS-SPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNG 60

Query: 61  KEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFEL 120
           KEF+  KQAA V   G EKVNTAPFSIYPGD KNSVDAQKPS VFSLQSP SEYHTRFEL
Sbjct: 61  KEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFEL 120

Query: 121 GFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180
           GFGQPV+CANYPYMEQHYGILSAYGPQIPGR+MLPMSLTTDDGPIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDIN 240
           IR+KAMM+NRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK+GK  +E KKV+++N
Sbjct: 181 IRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN 240

Query: 241 LSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPM 300
           LS+S TGSQCSVVLQ      NSPNE K GRGFNLS+SE+ SMF RGLQRFQI+HL P M
Sbjct: 241 LSES-TGSQCSVVLQSESGTLNSPNEAK-GRGFNLSSSEVPSMFSRGLQRFQISHLRPSM 300

Query: 301 QSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
           QSLAEIIDGGGHGMVLPKW+AAADNCC+L V
Sbjct: 301 QSLAEIIDGGGHGMVLPKWVAAADNCCDLCV 328

[Close]

BLAST of Sed0000093 vs. NCBI nr
Match: XP_022934917.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita moschata])

HSP 1 Score: 523.5 bits (1347), Expect = 1.3e-144
Identity = 266/332 (80.12%), Postives = 287/332 (86.45%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSI------E 60
           MAPQTG+LKEHEG+VPN LGQLSS SPARLWS +G G QS FGDFGQ+KASS        
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSS-SPARLWSGYGQGCQSFFGDFGQVKASSTIQQLGSN 60

Query: 61  GKEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFE 120
           GKEF+ T+QA  V   GFEK+NTAPFSIYPGD K SVD QKPS +FSLQSP SEYH RFE
Sbjct: 61  GKEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFE 120

Query: 121 LGFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180
           LGFGQP++CANYPYMEQHYGILSAY PQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR
Sbjct: 121 LGFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180

Query: 181 QIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDI 240
           +IR+KAMM+NRLA+TRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK  +EPKK+ DI
Sbjct: 181 KIRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKASMEPKKIEDI 240

Query: 241 NLSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPP 300
           NLSDST  SQCSVVLQ      NSPN GK GRGF+LS+SE+SS F RGLQRFQINH GP 
Sbjct: 241 NLSDSTGSSQCSVVLQSESGALNSPNGGK-GRGFSLSSSEVSSTFSRGLQRFQINHFGPS 300

Query: 301 MQSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
           MQSLAEIIDGGGHGMVLPKW+AAADNCC+L V
Sbjct: 301 MQSLAEIIDGGGHGMVLPKWVAAADNCCDLCV 330

[Close]

BLAST of Sed0000093 vs. NCBI nr
Match: XP_038906117.1 (nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_038906118.1 nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_038906119.1 nuclear transcription factor Y subunit A-10-like [Benincasa hispida])

HSP 1 Score: 518.8 bits (1335), Expect = 3.2e-143
Identity = 268/331 (80.97%), Postives = 292/331 (88.22%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSIE-----G 60
           MAPQTG+LKEHEGIVPN LGQLSS SPARLWS FG GSQS+FGDFG +KASSIE     G
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSS-SPARLWSAFGQGSQSIFGDFGHVKASSIEQLGSNG 60

Query: 61  KEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFEL 120
           KEF+ +KQ A     G EK+NTAPFSIYPGD K S+DAQKPS +FSLQSP SEYH RFEL
Sbjct: 61  KEFNGSKQVA----HGPEKLNTAPFSIYPGDCKISMDAQKPSPMFSLQSPLSEYHNRFEL 120

Query: 121 GFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180
           GFGQP++CANYPYMEQHYGILSA+GPQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPMICANYPYMEQHYGILSAFGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDIN 240
           IR+KAMM+N+LARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK  +E KK++D+N
Sbjct: 181 IRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMELKKIDDVN 240

Query: 241 LSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPM 300
           LSDS TGSQCSVVLQ      NSPNE K GRGF+LS+SE+SS+F RGLQRFQINHLGP M
Sbjct: 241 LSDS-TGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSIFPRGLQRFQINHLGPSM 300

Query: 301 QSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
            SLAEIIDGGGHGMVLPKW+AAADNCCNL V
Sbjct: 301 PSLAEIIDGGGHGMVLPKWVAAADNCCNLCV 324

[Close]

BLAST of Sed0000093 vs. NCBI nr
Match: XP_023527628.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo] >XP_023527629.1 nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo] >XP_023552348.1 nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo] >XP_023552349.1 nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.9 bits (1330), Expect = 1.2e-142
Identity = 264/332 (79.52%), Postives = 285/332 (85.84%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSI------E 60
           MAPQTG+LKEHEG+VPN LGQLSS SPARLWS +G G QS FGDFGQ+KASS        
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSS-SPARLWSGYGQGCQSFFGDFGQVKASSTIQQLGSN 60

Query: 61  GKEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFE 120
           GKEF+ T+QA  V   GFEK+NTAPFSIYPGD K SVD QKPS +FSLQSP SEYH RFE
Sbjct: 61  GKEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFE 120

Query: 121 LGFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180
           LGFGQP++CANYPYMEQHYGILSAY PQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR
Sbjct: 121 LGFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180

Query: 181 QIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDI 240
           +IR+KAMM+NRLA+TRKPYMHESRHLHAMRRPRGSGGRFLNTK LKNGK  +EPKK  DI
Sbjct: 181 KIRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKALKNGKASMEPKKFEDI 240

Query: 241 NLSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPP 300
           NLSDST  SQCSVVLQ      NSPNEGK GRGF+LS+SE+SSM  RGLQ+FQIN LGP 
Sbjct: 241 NLSDSTGSSQCSVVLQSESGALNSPNEGK-GRGFSLSSSEVSSMLSRGLQQFQINQLGPS 300

Query: 301 MQSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
           MQSLAEIIDGGGHGMVLPKW+AA DNCC+L V
Sbjct: 301 MQSLAEIIDGGGHGMVLPKWVAAVDNCCDLCV 330

[Close]

BLAST of Sed0000093 vs. NCBI nr
Match: KAG7017510.1 (Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 516.5 bits (1329), Expect = 1.6e-142
Identity = 263/332 (79.22%), Postives = 285/332 (85.84%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSI------E 60
           MAPQTG+LKEHEG+VPN LGQLSS SPARLWS +G G QS FGDFGQ+KASS        
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSS-SPARLWSGYGQGCQSFFGDFGQVKASSTIQQLGSN 60

Query: 61  GKEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFE 120
           GKEF+ T+QA  V   GFEK+NTAPFSIYPGD K SVD QKPS +FSLQSP SEYH RFE
Sbjct: 61  GKEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFE 120

Query: 121 LGFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180
           LGFGQP++CANYPYMEQHYGILSAY PQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR
Sbjct: 121 LGFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180

Query: 181 QIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDI 240
           +IR+KAMM+NRLA+TRKPYMHESRHLHAMRRPRGSGGRFLNTK LKNGK  +EPKK+ D+
Sbjct: 181 KIRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKALKNGKASMEPKKIEDM 240

Query: 241 NLSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPP 300
           NLSDST  SQCSVVLQ      NSPN GK GRGF+LS+SE+SS F RGLQ FQINH GP 
Sbjct: 241 NLSDSTGSSQCSVVLQSENGALNSPNGGK-GRGFSLSSSEVSSTFSRGLQLFQINHFGPS 300

Query: 301 MQSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
           MQSLAEIIDGGGHGMVLPKW+AAADNCC+L V
Sbjct: 301 MQSLAEIIDGGGHGMVLPKWVAAADNCCDLCV 330

[Close]

BLAST of Sed0000093 vs. ExPASy Swiss-Prot
Match: Q9M9X4 (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.9e-40
Identity = 128/318 (40.25%), Postives = 162/318 (50.94%), Query Frame = 0


Query: 22  LSSASPARLWSPFG---LGSQSVFGD---FGQLKASSIEGKEFSATKQAAPVGVPGFEKV 81
           L SA     W+ FG   L  +S+ GD   F  +K  S+        KQ+           
Sbjct: 10  LFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQS--------NSA 69

Query: 82  NTAPFSIYPGDTKNSVDAQKP--SVFSLQSPGSEYHTRFELGFGQPVLCANYPYME-QHY 141
               FS+  GD K+     KP  + FS+QSP        ELGF QP +   YPY E Q+Y
Sbjct: 70  THLAFSL--GDVKSPRLVPKPHGATFSMQSP------CLELGFSQPPIYTKYPYGEQQYY 129

Query: 142 GILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRSKAM----MKNRLART 201
           G++SAYG Q   R+MLP+++ T+D  IYVN+KQYHGIIRRRQ R+KA      K   +R 
Sbjct: 130 GVVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRC 189

Query: 202 RKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINLSDS-----TTGSQ 261
           RKPYMH SRHLHA+RRPRGSGGRFLNTK+          KK +      S      + SQ
Sbjct: 190 RKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQ 249

Query: 262 CSVVLQNSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPMQSLAEIIDGGGHGMV 317
            S V+        +  G N+S SE++SM            L  P+ SL         GMV
Sbjct: 250 NSEVVHPENGTMNLSNGLNVSGSEVTSMNY---------FLSSPVHSLG--------GMV 292

[Close]

BLAST of Sed0000093 vs. ExPASy Swiss-Prot
Match: Q8LFU0 (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=NFYA10 PE=2 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 3.4e-39
Identity = 123/315 (39.05%), Postives = 165/315 (52.38%), Query Frame = 0


Query: 21  QLSSASPARLWSPFG---LGSQSVFGD----FGQLKASSIEGKEFSATKQAAPVGVPGFE 80
           +L S      W+ FG   L ++S+ G+    F  +KA + E ++    KQ          
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQ---------- 64

Query: 81  KVNTAPFSIYPGDTKNSVDAQKPSV-FSLQSPGSEYHTRFELGFGQPVLCANYPYMEQHY 140
             +T  F+  PG  K+S D  KP V F++QS        FE GF QP++   +P++EQ+Y
Sbjct: 65  -TSTTLFTFSPGGEKSSRDVPKPHVAFAMQS------ACFEFGFAQPMMYTKHPHVEQYY 124

Query: 141 GILSAYGPQ-IPGRIMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRSKAMMKNRLARTRK 200
           G++SAYG Q   GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ R+KA    +L+R RK
Sbjct: 125 GVVSAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRK 184

Query: 201 PYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINLSDSTTGSQCSVVL-- 260
           PYMH SRHLHAMRRPRGSGGRFLNTK     K                 + SQ S V   
Sbjct: 185 PYMHHSRHLHAMRRPRGSGGRFLNTKTADAAK-------------QSKPSNSQSSEVFHP 244

Query: 261 -QNSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPMQSLAEIIDGGGHGMVLP-K 320
              + N  +     NLS+S ++SM       F  +    P             GMV+P K
Sbjct: 245 ENETINSSREANESNLSDSAVTSM-----DYFLSSSAYSP------------GGMVMPIK 269

[Close]

BLAST of Sed0000093 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 4.1e-24
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 124 NYPYMEQHYG--ILSAYGPQ-----------IPGRIMLPMSLTTDDGPIYVNAKQYHGII 183
           ++ Y + HYG  + + Y PQ           IPGR+ LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 184 RRRQIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNL 219
           RRRQ R+K   +N+L R RKPY+HESRH+HA++RPRGSGGRFLNTK L
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKL 240

[Close]

BLAST of Sed0000093 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.5e-22
Identity = 63/156 (40.38%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 116 FGQPVLCANYPYMEQHY---------------GI-LSAYGPQIPGRIMLPMSLTTDDGPI 175
           + +P+    YPY + +Y               G+ L   G Q PG   +P+     + P+
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPG---VPLQCDAVEEPV 103

Query: 176 YVNAKQYHGIIRRRQIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK 235
           +VNAKQYHGI+RRRQ R+K   +NR  + +KPYMHESRHLHA+RRPRG GGRFLN K  +
Sbjct: 104 FVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK-E 163

Query: 236 NGKDFVEPKKVNDINLSDSTTG--SQCSVVLQNSPN 254
           NG    E +  +D N S++++   S+   +  + PN
Sbjct: 164 NGDHKEEEEATSDENTSEASSSLRSEKLAMATSGPN 195

[Close]

BLAST of Sed0000093 vs. ExPASy Swiss-Prot
Match: Q9LNP6 (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NFYA8 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 9.4e-21
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 124 NYPYMEQHYGIL--SAYGPQIP------GRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQI 183
           ++ Y + H+G L  +AY PQ         R+ LP  L  ++ P++VNAKQ+H I+RRRQ 
Sbjct: 132 SFHYADPHFGGLMPAAYLPQATIWNPQMTRVPLPFDLIENE-PVFVNAKQFHAIMRRRQQ 191

Query: 184 RSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINL 243
           R+K   +N+L + RKPY+HESRH+HA++RPRGSGGRFLNTK L+   D   PK+   I  
Sbjct: 192 RAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQESTD---PKQDMPIQ- 251

Query: 244 SDSTTGSQCSVVLQNSPN 254
               TG+    VL    N
Sbjct: 252 QQHATGNMSRFVLYQLQN 264

[Close]

BLAST of Sed0000093 vs. ExPASy TrEMBL
Match: A0A6J1DDB6 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019330 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.2e-148
Identity = 276/331 (83.38%), Postives = 295/331 (89.12%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSIE-----G 60
           MAPQTG+LKEHEGIVPN LGQLSS SPARLWS FG GSQ++FGDFGQLKASSIE     G
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSS-SPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNG 60

Query: 61  KEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFEL 120
           KEF+  KQAA V   G EKVNTAPFSIYPGD KNSVDAQKPS VFSLQSP SEYHTRFEL
Sbjct: 61  KEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFEL 120

Query: 121 GFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180
           GFGQPV+CANYPYMEQHYGILSAYGPQIPGR+MLPMSLTTDDGPIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDIN 240
           IR+KAMM+NRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK+GK  +E KKV+++N
Sbjct: 181 IRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN 240

Query: 241 LSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPM 300
           LS+S TGSQCSVVLQ      NSPNE K GRGFNLS+SE+ SMF RGLQRFQI+HL P M
Sbjct: 241 LSES-TGSQCSVVLQSESGTLNSPNEAK-GRGFNLSSSEVPSMFSRGLQRFQISHLRPSM 300

Query: 301 QSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
           QSLAEIIDGGGHGMVLPKW+AAADNCC+L V
Sbjct: 301 QSLAEIIDGGGHGMVLPKWVAAADNCCDLCV 328

[Close]

BLAST of Sed0000093 vs. ExPASy TrEMBL
Match: A0A6J1F452 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111441949 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.3e-145
Identity = 266/332 (80.12%), Postives = 287/332 (86.45%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSI------E 60
           MAPQTG+LKEHEG+VPN LGQLSS SPARLWS +G G QS FGDFGQ+KASS        
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSS-SPARLWSGYGQGCQSFFGDFGQVKASSTIQQLGSN 60

Query: 61  GKEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFE 120
           GKEF+ T+QA  V   GFEK+NTAPFSIYPGD K SVD QKPS +FSLQSP SEYH RFE
Sbjct: 61  GKEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFE 120

Query: 121 LGFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180
           LGFGQP++CANYPYMEQHYGILSAY PQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR
Sbjct: 121 LGFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180

Query: 181 QIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDI 240
           +IR+KAMM+NRLA+TRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK  +EPKK+ DI
Sbjct: 181 KIRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKASMEPKKIEDI 240

Query: 241 NLSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPP 300
           NLSDST  SQCSVVLQ      NSPN GK GRGF+LS+SE+SS F RGLQRFQINH GP 
Sbjct: 241 NLSDSTGSSQCSVVLQSESGALNSPNGGK-GRGFSLSSSEVSSTFSRGLQRFQINHFGPS 300

Query: 301 MQSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
           MQSLAEIIDGGGHGMVLPKW+AAADNCC+L V
Sbjct: 301 MQSLAEIIDGGGHGMVLPKWVAAADNCCDLCV 330

[Close]

BLAST of Sed0000093 vs. ExPASy TrEMBL
Match: A0A6J1IY51 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111481693 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 6.5e-142
Identity = 263/332 (79.22%), Postives = 284/332 (85.54%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSI------E 60
           MAPQTG+LKEHEG+VPN LGQLSS SPARLWS +G G QS FGDFGQLKASS        
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSS-SPARLWSGYGQGCQSFFGDFGQLKASSTIQQLGSN 60

Query: 61  GKEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFE 120
           GKEF+ T+QA  V   GFEK+NTAPFSIYPGD K SVD QKPS +FSLQSP SEYH RFE
Sbjct: 61  GKEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFE 120

Query: 121 LGFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180
           LGFGQP++CANYPYMEQHYGILSAY PQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR
Sbjct: 121 LGFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRR 180

Query: 181 QIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDI 240
           +IR+KAMM+NRLA+TRKPYMHESRHLHAMRRPRGSGGRFLNTK LKNGK  +EPKK+ D+
Sbjct: 181 KIRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKALKNGKASMEPKKIEDM 240

Query: 241 NLSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPP 300
           NLSDST  SQCSVVLQ      NSPNEGK GRGF+LS+SE+SSMF RGLQRFQINHLGP 
Sbjct: 241 NLSDSTGSSQCSVVLQSESGALNSPNEGK-GRGFSLSSSEVSSMFSRGLQRFQINHLGPS 300

Query: 301 MQSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
            QS  EIIDGG HGMVLPKW+AAADNC +L V
Sbjct: 301 RQSQTEIIDGGEHGMVLPKWVAAADNCYDLCV 330

[Close]

BLAST of Sed0000093 vs. ExPASy TrEMBL
Match: A0A1S3B7N7 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103486690 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 4.2e-141
Identity = 262/331 (79.15%), Postives = 289/331 (87.31%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSIE-----G 60
           MAPQTG LKEHE I+PN LGQL S SPARLWS FG G QS+FGDFGQ+KASSI+     G
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQL-SPSPARLWSAFGQGPQSIFGDFGQVKASSIQQLGSNG 60

Query: 61  KEFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFEL 120
           KEF+ TKQ   V   G +K+NTAPFSIYPGD K S+DAQKPS VFSLQSP +EYH RFEL
Sbjct: 61  KEFNGTKQ---VVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFEL 120

Query: 121 GFGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180
           GFGQP++C NYPYMEQHYGILSAYGPQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDIN 240
           IR+KAMM+N+LARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK  +EPKK++++N
Sbjct: 181 IRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVN 240

Query: 241 LSDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPM 300
           LSDS TGSQCSVVLQ      NSPNE K GRGF+LS+SE+SS+F RGLQRFQINHLGP +
Sbjct: 241 LSDS-TGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSIFSRGLQRFQINHLGPSI 300

Query: 301 QSLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
            SLAEIIDGGGHGMVLPKW+AAADNCC+L V
Sbjct: 301 PSLAEIIDGGGHGMVLPKWVAAADNCCDLCV 325

[Close]

BLAST of Sed0000093 vs. ExPASy TrEMBL
Match: A0A0A0LE75 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_3G782710 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 4.2e-141
Identity = 261/330 (79.09%), Postives = 290/330 (87.88%), Query Frame = 0


Query: 1   MAPQTGFLKEHEGIVPNFLGQLSSASPARLWSPFGLGSQSVFGDFGQLKASSIE----GK 60
           MAPQTG LKEHE I+PN LGQL S +PARLWS  G GSQS+FGDFGQ+KASSI+    GK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQL-SPTPARLWSALGQGSQSIFGDFGQVKASSIQLGSNGK 60

Query: 61  EFSATKQAAPVGVPGFEKVNTAPFSIYPGDTKNSVDAQKPS-VFSLQSPGSEYHTRFELG 120
           EF+ TKQ   V   G +K+NTAPFSIYPGD K S+DAQKPS VFSLQSP +EYH RFELG
Sbjct: 61  EFNGTKQ---VVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELG 120

Query: 121 FGQPVLCANYPYMEQHYGILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQI 180
           FGQP++CANYPYM+QHYGILSAYGPQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRRQI
Sbjct: 121 FGQPLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQI 180

Query: 181 RSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINL 240
           R+KAMM+N+LARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK  +EPKK++++NL
Sbjct: 181 RAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNL 240

Query: 241 SDSTTGSQCSVVLQ------NSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPMQ 300
           SDS TGSQCSVVLQ      NSPNE K GRGF+LS+SE+SS+F RGLQRFQINHLGP + 
Sbjct: 241 SDS-TGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSLFSRGLQRFQINHLGPSIP 300

Query: 301 SLAEIIDGGGHGMVLPKWIAAADNCCNLYV 320
           SLAEIIDGGGHGMVLPKW+AAADNCC+L V
Sbjct: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 324

[Close]

BLAST of Sed0000093 vs. TAIR 10
Match: AT3G05690.1 (nuclear factor Y, subunit A2 )

HSP 1 Score: 166.0 bits (419), Expect = 4.9e-41
Identity = 128/318 (40.25%), Postives = 162/318 (50.94%), Query Frame = 0


Query: 22  LSSASPARLWSPFG---LGSQSVFGD---FGQLKASSIEGKEFSATKQAAPVGVPGFEKV 81
           L SA     W+ FG   L  +S+ GD   F  +K  S+        KQ+           
Sbjct: 10  LFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQS--------NSA 69

Query: 82  NTAPFSIYPGDTKNSVDAQKP--SVFSLQSPGSEYHTRFELGFGQPVLCANYPYME-QHY 141
               FS+  GD K+     KP  + FS+QSP        ELGF QP +   YPY E Q+Y
Sbjct: 70  THLAFSL--GDVKSPRLVPKPHGATFSMQSP------CLELGFSQPPIYTKYPYGEQQYY 129

Query: 142 GILSAYGPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRQIRSKAM----MKNRLART 201
           G++SAYG Q   R+MLP+++ T+D  IYVN+KQYHGIIRRRQ R+KA      K   +R 
Sbjct: 130 GVVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRC 189

Query: 202 RKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINLSDS-----TTGSQ 261
           RKPYMH SRHLHA+RRPRGSGGRFLNTK+          KK +      S      + SQ
Sbjct: 190 RKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQ 249

Query: 262 CSVVLQNSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPMQSLAEIIDGGGHGMV 317
            S V+        +  G N+S SE++SM            L  P+ SL         GMV
Sbjct: 250 NSEVVHPENGTMNLSNGLNVSGSEVTSMNY---------FLSSPVHSLG--------GMV 292

[Close]

BLAST of Sed0000093 vs. TAIR 10
Match: AT5G06510.1 (nuclear factor Y, subunit A10 )

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-40
Identity = 123/315 (39.05%), Postives = 165/315 (52.38%), Query Frame = 0


Query: 21  QLSSASPARLWSPFG---LGSQSVFGD----FGQLKASSIEGKEFSATKQAAPVGVPGFE 80
           +L S      W+ FG   L ++S+ G+    F  +KA + E ++    KQ          
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQ---------- 64

Query: 81  KVNTAPFSIYPGDTKNSVDAQKPSV-FSLQSPGSEYHTRFELGFGQPVLCANYPYMEQHY 140
             +T  F+  PG  K+S D  KP V F++QS        FE GF QP++   +P++EQ+Y
Sbjct: 65  -TSTTLFTFSPGGEKSSRDVPKPHVAFAMQS------ACFEFGFAQPMMYTKHPHVEQYY 124

Query: 141 GILSAYGPQ-IPGRIMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRSKAMMKNRLARTRK 200
           G++SAYG Q   GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ R+KA    +L+R RK
Sbjct: 125 GVVSAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRK 184

Query: 201 PYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINLSDSTTGSQCSVVL-- 260
           PYMH SRHLHAMRRPRGSGGRFLNTK     K                 + SQ S V   
Sbjct: 185 PYMHHSRHLHAMRRPRGSGGRFLNTKTADAAK-------------QSKPSNSQSSEVFHP 244

Query: 261 -QNSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPMQSLAEIIDGGGHGMVLP-K 320
              + N  +     NLS+S ++SM       F  +    P             GMV+P K
Sbjct: 245 ENETINSSREANESNLSDSAVTSM-----DYFLSSSAYSP------------GGMVMPIK 269

[Close]

BLAST of Sed0000093 vs. TAIR 10
Match: AT5G06510.2 (nuclear factor Y, subunit A10 )

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-40
Identity = 123/315 (39.05%), Postives = 165/315 (52.38%), Query Frame = 0


Query: 21  QLSSASPARLWSPFG---LGSQSVFGD----FGQLKASSIEGKEFSATKQAAPVGVPGFE 80
           +L S      W+ FG   L ++S+ G+    F  +KA + E ++    KQ          
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSGEASDSFTGVKAVTTEAEQGVVDKQ---------- 64

Query: 81  KVNTAPFSIYPGDTKNSVDAQKPSV-FSLQSPGSEYHTRFELGFGQPVLCANYPYMEQHY 140
             +T  F+  PG  K+S D  KP V F++QS        FE GF QP++   +P++EQ+Y
Sbjct: 65  -TSTTLFTFSPGGEKSSRDVPKPHVAFAMQS------ACFEFGFAQPMMYTKHPHVEQYY 124

Query: 141 GILSAYGPQ-IPGRIMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRSKAMMKNRLARTRK 200
           G++SAYG Q   GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ R+KA    +L+R RK
Sbjct: 125 GVVSAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRK 184

Query: 201 PYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINLSDSTTGSQCSVVL-- 260
           PYMH SRHLHAMRRPRGSGGRFLNTK     K                 + SQ S V   
Sbjct: 185 PYMHHSRHLHAMRRPRGSGGRFLNTKTADAAK-------------QSKPSNSQSSEVFHP 244

Query: 261 -QNSPNEGKVGRGFNLSNSEISSMFQRGLQRFQINHLGPPMQSLAEIIDGGGHGMVLP-K 320
              + N  +     NLS+S ++SM       F  +    P             GMV+P K
Sbjct: 245 ENETINSSREANESNLSDSAVTSM-----DYFLSSSAYSP------------GGMVMPIK 269

[Close]

BLAST of Sed0000093 vs. TAIR 10
Match: AT5G06510.3 (nuclear factor Y, subunit A10 )

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-37
Identity = 106/244 (43.44%), Postives = 136/244 (55.74%), Query Frame = 0


Query: 85  GDTKNSVDAQKPSV-FSLQSPGSEYHTRFELGFGQPVLCANYPYMEQHYGILSAYGPQ-I 144
           G  K+S D  KP V F++QS        FE GF QP++   +P++EQ+YG++SAYG Q  
Sbjct: 16  GGEKSSRDVPKPHVAFAMQS------ACFEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRS 75

Query: 145 PGRIMLPMSL-TTDDGPIYVNAKQYHGIIRRRQIRSKAMMKNRLARTRKPYMHESRHLHA 204
            GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ R+KA    +L+R RKPYMH SRHLHA
Sbjct: 76  SGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHA 135

Query: 205 MRRPRGSGGRFLNTKNLKNGKDFVEPKKVNDINLSDSTTGSQCSVVL---QNSPNEGKVG 264
           MRRPRGSGGRFLNTK     K                 + SQ S V      + N  +  
Sbjct: 136 MRRPRGSGGRFLNTKTADAAK-------------QSKPSNSQSSEVFHPENETINSSREA 195

Query: 265 RGFNLSNSEISSMFQRGLQRFQINHLGPPMQSLAEIIDGGGHGMVLP-KWIAAADN--CC 320
              NLS+S ++SM       F  +    P             GMV+P KW AAA +  CC
Sbjct: 196 NESNLSDSAVTSM-----DYFLSSSAYSP------------GGMVMPIKWNAAAMDIGCC 220

[Close]

BLAST of Sed0000093 vs. TAIR 10
Match: AT1G72830.1 (nuclear factor Y, subunit A3 )

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-25
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 124 NYPYMEQHYG--ILSAYGPQ-----------IPGRIMLPMSLTTDDGPIYVNAKQYHGII 183
           ++ Y + HYG  + + Y PQ           IPGR+ LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 184 RRRQIRSKAMMKNRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNL 219
           RRRQ R+K   +N+L R RKPY+HESRH+HA++RPRGSGGRFLNTK L
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKL 240

The following BLAST results are available for this feature:

BLAST of Sed0000093 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151376.1	2.5e-148	83.38	nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377....	[more]
XP_022934917.1	1.3e-144	80.12	nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]	[more]
XP_038906117.1	3.2e-143	80.97	nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_0389061...	[more]
XP_023527628.1	1.2e-142	79.52	nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo] >X...	[more]
KAG7017510.1	1.6e-142	79.22	Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Sed0000093 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9X4	6.9e-40	40.25	Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8LFU0	3.4e-39	39.05	Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
Q93ZH2	4.1e-24	54.63	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	8.5e-22	40.38	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LNP6	9.4e-21	44.93	Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Sed0000093 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDB6	1.2e-148	83.38	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1F452	6.3e-145	80.12	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IY51	6.5e-142	79.22	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114816...	[more]
A0A1S3B7N7	4.2e-141	79.15	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103486690 P...	[more]
A0A0A0LE75	4.2e-141	79.09	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_3G78271...	[more]

BLAST of Sed0000093 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05690.1	4.9e-41	40.25	nuclear factor Y, subunit A2	[more]
AT5G06510.1	2.4e-40	39.05	nuclear factor Y, subunit A10	[more]
AT5G06510.2	2.4e-40	39.05	nuclear factor Y, subunit A10	[more]
AT5G06510.3	1.5e-37	43.44	nuclear factor Y, subunit A10	[more]
AT1G72830.1	2.9e-25	54.63	nuclear factor Y, subunit A3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 189..212 score: 80.32 coord: 158..180 score: 64.98
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 154..215 e-value: 2.6E-33 score: 126.7
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 158..212 e-value: 1.0E-24 score: 86.9
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 4..317
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 155..215 score: 34.601749
None	No IPR available	GENE3D	6.10.250.2430		coord: 156..216 e-value: 7.3E-29 score: 101.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..218
None	No IPR available	PANTHER	PTHR12632:SF39	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-10	coord: 4..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000093.1	Sed0000093.1	mRNA
Sed0000093.2	Sed0000093.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity