Sed0000047 (gene) Chayote v1

Overview


Name	Sed0000047
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CCHC-type domain-containing protein
Location	LG11: 19349531 .. 19351164 (-)
RNA-Seq Expression	Sed0000047
Synteny	Sed0000047

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATTTAGAGCTAGCTGGTCAAGAAGCTCAAGGTGTTTTTGAGCTTGAGGATAATGAAATTTCAGAGTACGAAAGTGTGCTTGAAAATGTGGTTGCATGCAAGATACTCTCAGAGAATCAATCTAGCCCAGATGTGTTTAAAAAATTAATTCCAAAAATTTGGAACACTGAACAGAAGGTTTTGATTGAATCAGTGGGCGGTAATGTATTTGTTTGTACATTTAGTAATTCAGTTGTTAGAGATAAGGTTCTCGAAGCGAGCCCATGGATATATGATAACGCTTTGTTGCTTTTCGAAAAGATGACTGGGGATAAACGTGTTTCTGAGATGGAGTTTGGGTTTGCAGCGTTTTGGGTCCGTCTTCACGATGTTCCCCCCGCCTGCCACACGGAAAATAGTGCGAAAGGTTTGGGTAAATTAATGGGAGATTTTATCAAATGGGATTTTGAGGGGGATCAACGAAATAGGGGAAAATTTCTAAGGCTCAAGGTGTCGATTGACATTCGTTTACCGCTGAGAAGAGCTCTGAAGGTGAAGAGTGGAGCAATGGCGGATGAAAAATGGGTTCGAATTTCGTATGAAAAATTACCTGATTTTTGTCAAGGGTGTGGGAGAATAGGTCACTTGGCTAGTGGATGCACTTTTGTGGTCATAGGTGAAGGTCTTCGGTTTCCATTCGGAGAAGATTTGAGAGAGCCAACGAATTATTTCAAAGGGGATAGATCTGATTTTCAGAGGCATGGAGGAAGAGGGAGAGGTCGTGGAAGAGGAAGATTGGATGAGCATAGATCAGAGGACCTTGCTTTTTCGGAAGGGCGAGCTTGTGAGAAGGTTGGTTGCGATCAAAGAAGATCGAAGGAGACGAAGGAAGGGCAGTTTCAGGCGAGATTTGAGAGGAGCTCCACTGCCAACGGTTCGTCGGCCTTTACCTCGGGAGAAGGCGAGGTTTTTTGGGGTGAAGATCAGTTTGCGCAGAAGAATTCAGCCAATTTTGGGGCTAGGTCAGCTACGGAGGAAAAAGAACTGGGCAGAGACTTCTCAAATCAGTTTAATGAAGTGGCAGAGAAGGGACATGTGGCAAAATCTCAAAATGACAGATGTGATGAAAAAGGGAAAGCTAAAGTTATCGCAAAAGGTTTGAACGAGCTTTTATTTGGGCCATTTGATATTCATATTAAAGCCCACCAACACTTGGATTTGGGAGCTTCTTTTTATGGGTCAAGGAAAGGTGTGGTAATTAATGAATTGAGTTCCATGAATAATCCTAAAAAAGGAAGCATGAATTTACATTCTGCCTGTGTGGAGAAAAAAATTAAAAATGTGGTGAAAAAAGTTTATTATTCTAATGAAAATGACTTCAAAAAAGATAAAAAGATATTTGAAGATATTGATGGGTTTAGAGACCCAATTGGACCAATTGCGGAGGATTTAACCATTTCCCTTCAAAAATTGGAGGAGCAGCAAGATTTTTCAAGGATTGATCATGAGGTGTTGGAAATGGAAAAACAGTTGAATATAAAAAATGATTTTGAAGGTGGGCATGAAGGGATAATTGATGAAAAAATTAGTGGAAAAAAATCAGTCATAAAATGGAAGAGGCGAGCACAATTGGGAGGGAGATCGATTGA

mRNA sequence

ATGGAGAATTTAGAGCTAGCTGGTCAAGAAGCTCAAGGTGTTTTTGAGCTTGAGGATAATGAAATTTCAGAGTACGAAAGTGTGCTTGAAAATGTGGTTGCATGCAAGATACTCTCAGAGAATCAATCTAGCCCAGATGTGTTTAAAAAATTAATTCCAAAAATTTGGAACACTGAACAGAAGGTTTTGATTGAATCAGTGGGCGGTAATGTATTTGTTTGTACATTTAGTAATTCAGTTGTTAGAGATAAGGTTCTCGAAGCGAGCCCATGGATATATGATAACGCTTTGTTGCTTTTCGAAAAGATGACTGGGGATAAACGTGTTTCTGAGATGGAGTTTGGGTTTGCAGCGTTTTGGGTCCGTCTTCACGATGTTCCCCCCGCCTGCCACACGGAAAATAGTGCGAAAGGTTTGGGTAAATTAATGGGAGATTTTATCAAATGGGATTTTGAGGGGGATCAACGAAATAGGGGAAAATTTCTAAGGCTCAAGGTGTCGATTGACATTCGTTTACCGCTGAGAAGAGCTCTGAAGGTGAAGAGTGGAGCAATGGCGGATGAAAAATGGGTTCGAATTTCGTATGAAAAATTACCTGATTTTTGTCAAGGGTGTGGGAGAATAGGTCACTTGGCTAGTGGATGCACTTTTGTGGTCATAGGTGAAGGTCTTCGGTTTCCATTCGGAGAAGATTTGAGAGAGCCAACGAATTATTTCAAAGGGGATAGATCTGATTTTCAGAGGCATGGAGGAAGAGGGAGAGGTCGTGGAAGAGGAAGATTGGATGAGCATAGATCAGAGGACCTTGCTTTTTCGGAAGGGCGAGCTTGTGAGAAGGTTGGTTGCGATCAAAGAAGATCGAAGGAGACGAAGGAAGGGCAGTTTCAGGCGAGATTTGAGAGGAGCTCCACTGCCAACGGTTCGTCGGCCTTTACCTCGGGAGAAGGCGAGGTTTTTTGGGGTGAAGATCAGTTTGCGCAGAAGAATTCAGCCAATTTTGGGGCTAGGTCAGCTACGGAGGAAAAAGAACTGGGCAGAGACTTCTCAAATCAGTTTAATGAAGTGGCAGAGAAGGGACATGTGGCAAAATCTCAAAATGACAGATGTGATGAAAAAGGGAAAGCTAAAGTTATCGCAAAAGGTTTGAACGAGCTTTTATTTGGGCCATTTGATATTCATATTAAAGCCCACCAACACTTGGATTTGGGAGCTTCTTTTTATGGGTCAAGGAAAGATAAAAAGATATTTGAAGATATTGATGGGTTTAGAGACCCAATTGGACCAATTGCGGAGGATTTAACCATTTCCCTTCAAAAATTGGAGGAGCAGCAAGATTTTTCAAGGATTGATCATGAGGTGTTGGAAATGGAAAAACATCATAAAATGGAAGAGGCGAGCACAATTGGGAGGGAGATCGATTGA

Coding sequence (CDS)

ATGGAGAATTTAGAGCTAGCTGGTCAAGAAGCTCAAGGTGTTTTTGAGCTTGAGGATAATGAAATTTCAGAGTACGAAAGTGTGCTTGAAAATGTGGTTGCATGCAAGATACTCTCAGAGAATCAATCTAGCCCAGATGTGTTTAAAAAATTAATTCCAAAAATTTGGAACACTGAACAGAAGGTTTTGATTGAATCAGTGGGCGGTAATGTATTTGTTTGTACATTTAGTAATTCAGTTGTTAGAGATAAGGTTCTCGAAGCGAGCCCATGGATATATGATAACGCTTTGTTGCTTTTCGAAAAGATGACTGGGGATAAACGTGTTTCTGAGATGGAGTTTGGGTTTGCAGCGTTTTGGGTCCGTCTTCACGATGTTCCCCCCGCCTGCCACACGGAAAATAGTGCGAAAGGTTTGGGTAAATTAATGGGAGATTTTATCAAATGGGATTTTGAGGGGGATCAACGAAATAGGGGAAAATTTCTAAGGCTCAAGGTGTCGATTGACATTCGTTTACCGCTGAGAAGAGCTCTGAAGGTGAAGAGTGGAGCAATGGCGGATGAAAAATGGGTTCGAATTTCGTATGAAAAATTACCTGATTTTTGTCAAGGGTGTGGGAGAATAGGTCACTTGGCTAGTGGATGCACTTTTGTGGTCATAGGTGAAGGTCTTCGGTTTCCATTCGGAGAAGATTTGAGAGAGCCAACGAATTATTTCAAAGGGGATAGATCTGATTTTCAGAGGCATGGAGGAAGAGGGAGAGGTCGTGGAAGAGGAAGATTGGATGAGCATAGATCAGAGGACCTTGCTTTTTCGGAAGGGCGAGCTTGTGAGAAGGTTGGTTGCGATCAAAGAAGATCGAAGGAGACGAAGGAAGGGCAGTTTCAGGCGAGATTTGAGAGGAGCTCCACTGCCAACGGTTCGTCGGCCTTTACCTCGGGAGAAGGCGAGGTTTTTTGGGGTGAAGATCAGTTTGCGCAGAAGAATTCAGCCAATTTTGGGGCTAGGTCAGCTACGGAGGAAAAAGAACTGGGCAGAGACTTCTCAAATCAGTTTAATGAAGTGGCAGAGAAGGGACATGTGGCAAAATCTCAAAATGACAGATGTGATGAAAAAGGGAAAGCTAAAGTTATCGCAAAAGGTTTGAACGAGCTTTTATTTGGGCCATTTGATATTCATATTAAAGCCCACCAACACTTGGATTTGGGAGCTTCTTTTTATGGGTCAAGGAAAGATAAAAAGATATTTGAAGATATTGATGGGTTTAGAGACCCAATTGGACCAATTGCGGAGGATTTAACCATTTCCCTTCAAAAATTGGAGGAGCAGCAAGATTTTTCAAGGATTGATCATGAGGTGTTGGAAATGGAAAAACATCATAAAATGGAAGAGGCGAGCACAATTGGGAGGGAGATCGATTGA

Protein sequence

MENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQKVLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWVRLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVKSGAMADEKWVRISYEKLPDFCQGCGRIGHLASGCTFVVIGEGLRFPFGEDLREPTNYFKGDRSDFQRHGGRGRGRGRGRLDEHRSEDLAFSEGRACEKVGCDQRRSKETKEGQFQARFERSSTANGSSAFTSGEGEVFWGEDQFAQKNSANFGARSATEEKELGRDFSNQFNEVAEKGHVAKSQNDRCDEKGKAKVIAKGLNELLFGPFDIHIKAHQHLDLGASFYGSRKDKKIFEDIDGFRDPIGPIAEDLTISLQKLEEQQDFSRIDHEVLEMEKHHKMEEASTIGREID

Homology

[Close]

BLAST of Sed0000047 vs. NCBI nr
Match: TXG53376.1 (hypothetical protein EZV62_022545 [Acer yangbiense])

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-34
Identity = 84/214 (39.25%), Postives = 128/214 (59.81%), Query Frame = 0


Query: 2   ENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQK 61
           ENL LA ++   +   E+  I   + V   +V  K+LS  + + + FK LI +IW+   +
Sbjct: 11  ENLSLAEEDGVVLEMSEETSIDGVKDVNRCLVG-KVLSYKKVNREAFKGLIEQIWSPFGQ 70

Query: 62  VLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWV 121
           V +ESVG N+F+  F+N   R++VL+  PW + N+L++ EK TG+  VS++ F  A FWV
Sbjct: 71  VEVESVGDNLFMFYFNNGEDRNRVLQRGPWHFGNSLIVLEKSTGEGNVSKLGFNRADFWV 130

Query: 122 RLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVK 181
           ++HD+P  C    +AK L K +G+ ++   E  +   GKF+ +KV IDI  PL+R LK+K
Sbjct: 131 QIHDIPILCMNRRTAKWLAKQIGEVVEIPSE-SRECWGKFMWVKVRIDILKPLKRWLKLK 190

Query: 182 SGAMADEKWVRISYEKLPDFCQGCGRIGHLASGC 216
            G   +   V + YEKLPDFC  CGR+G+    C
Sbjct: 191 IGQTDEVTLVSLKYEKLPDFCYACGRMGYGMKEC 222

[Close]

BLAST of Sed0000047 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense])

HSP 1 Score: 155.6 bits (392), Expect = 1.1e-33
Identity = 75/214 (35.05%), Postives = 127/214 (59.35%), Query Frame = 0


Query: 2   ENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQK 61
           ENL L  ++A  V E+ ++ I + +  ++  +  K+L+  + + + FK LI +IWN   +
Sbjct: 11  ENLSLEDEDA-AVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQIWNQFGQ 70

Query: 62  VLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWV 121
           V +E VG N F+  F+N   R+KV    PW++  +L++ EK  G   +++++F  A FWV
Sbjct: 71  VEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKFNQADFWV 130

Query: 122 RLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVK 181
           ++HD+P  C  + + K L + +G+ ++   E  +   GK++R+KV +DI  PL+R L++K
Sbjct: 131 QIHDIPIMCMNQRTTKWLAEYIGEVVEIPTE-SRECWGKYVRVKVQVDITKPLKRWLRIK 190

Query: 182 SGAMADEKWVRISYEKLPDFCQGCGRIGHLASGC 216
            G   +   V + YE+LPDFC  CGRIGH    C
Sbjct: 191 LGKYEEITMVALKYERLPDFCFACGRIGHSVREC 222

[Close]

BLAST of Sed0000047 vs. NCBI nr
Match: TXG50019.1 (hypothetical protein EZV62_025894 [Acer yangbiense])

HSP 1 Score: 149.8 bits (377), Expect = 5.8e-32
Identity = 76/204 (37.25%), Postives = 112/204 (54.90%), Query Frame = 0


Query: 33  VACKILSENQSSPDVFKKLIPKIWNTEQKVLIESVGGNVFVCTFSNSVVRDKVLEASPWI 92
           +A K+LS    + + F  ++P+IW T ++  IE + GN+F  TF     R  VL   PW 
Sbjct: 41  LAGKLLSVKHVNREAFLSVLPRIWRTVKEFEIEILEGNIFSFTFKEESDRRSVLRGGPWS 100

Query: 93  YDNALLLFEKMTGDKRVSEMEFGFAAFWVRLHDVPPACHTENSAKGLGKLMGDFIKWDFE 152
           +D ALL+ E+ TG   + EM+F   AFW+++H VP  C T    + LG ++G+  + D  
Sbjct: 101 FDKALLVLEEPTGKGDIREMKFDKVAFWIQIHKVPLLCMTSEIGRFLGSMIGEVKEIDDG 160

Query: 153 GDQRNRGKFLRLKVSIDIRLPLRRALKVKSGAMADEKWVRISYEKLPDFCQGCGRIGHLA 212
           G     GK++R++V +D+  PLRR L+V       E  + + YE+LPD C  CGRIGH+ 
Sbjct: 161 GSGDCVGKYIRVRVVVDVTKPLRRMLRVDVLGDGKETNMLLRYERLPDHCYRCGRIGHVV 220

Query: 213 SGCTFV---VIGEGLRFPFGEDLR 234
             C+ V   V  E     FG  LR
Sbjct: 221 RDCSIVPSSVEPEDYNLMFGSWLR 244

[Close]

BLAST of Sed0000047 vs. NCBI nr
Match: TXG57113.1 (hypothetical protein EZV62_018426 [Acer yangbiense])

HSP 1 Score: 148.3 bits (373), Expect = 1.7e-31
Identity = 75/214 (35.05%), Postives = 124/214 (57.94%), Query Frame = 0


Query: 2   ENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQK 61
           E+L +A +E + + E+ +    +    ++  +  K+LS  + + + FK LI +IWN   +
Sbjct: 11  ESLFIA-EEDRAILEMSEETSVDGVEDVDRCLVVKVLSGKKVNREAFKGLIEQIWNPNGQ 70

Query: 62  VLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWV 121
           V +E VG N F+  F N+  R++V    PW + N+L++ EK  G   +S++ F  A FWV
Sbjct: 71  VEVELVGDNRFMFYFINNEDRNRVWNRGPWHFGNSLIVLEKPVGPGNISKLSFNKADFWV 130

Query: 122 RLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVK 181
           ++HD+P  C    +AK L + +G+ ++   E  +   GKF+R+KV IDI  PL+R L++K
Sbjct: 131 QIHDIPILCMNRRTAKWLAEQIGEVVEIPLE-SRECWGKFMRVKVRIDILKPLKRWLRLK 190

Query: 182 SGAMADEKWVRISYEKLPDFCQGCGRIGHLASGC 216
            G   +   V + YE+LP+FC  CG+IGH    C
Sbjct: 191 LGKCDEITTVGLKYERLPEFCYACGKIGHGIKEC 222

[Close]

BLAST of Sed0000047 vs. NCBI nr
Match: TXG63385.1 (hypothetical protein EZV62_010379 [Acer yangbiense])

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-31
Identity = 75/214 (35.05%), Postives = 122/214 (57.01%), Query Frame = 0


Query: 2   ENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQK 61
           ENL L   E + V E+ ++   E +  ++  +  K+LS  + + + FK LI +IWN    
Sbjct: 11  ENLTLV-DEDEAVLEMAEDFEQEGDEDVDRCLVGKVLSGKKVNREAFKGLIKQIWNPYGN 70

Query: 62  VLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWV 121
           V +E V  N+F   F+N   R++V    PW + N+L++ EK  G   ++++ F  A FW+
Sbjct: 71  VKVELVDDNIFTFHFANKEDRNRVWFRGPWHFGNSLIVLEKQMGLGNIAQLGFNKAEFWI 130

Query: 122 RLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVK 181
           ++HD+P +C    +AK L + +G+ ++   E  +  RGKF+R+KV IDI   L+R LK+K
Sbjct: 131 QIHDIPISCMNRRTAKWLTEQIGEVVEIPTE-SRECRGKFMRVKVRIDISKALKRWLKLK 190

Query: 182 SGAMADEKWVRISYEKLPDFCQGCGRIGHLASGC 216
                +   + + YE+LPDFC  CG+IGH    C
Sbjct: 191 LNRSEEITMMNLKYERLPDFCFACGKIGHCIREC 222

[Close]

BLAST of Sed0000047 vs. ExPASy TrEMBL
Match: A0A5C7HB59 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-34
Identity = 84/214 (39.25%), Postives = 128/214 (59.81%), Query Frame = 0


Query: 2   ENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQK 61
           ENL LA ++   +   E+  I   + V   +V  K+LS  + + + FK LI +IW+   +
Sbjct: 11  ENLSLAEEDGVVLEMSEETSIDGVKDVNRCLVG-KVLSYKKVNREAFKGLIEQIWSPFGQ 70

Query: 62  VLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWV 121
           V +ESVG N+F+  F+N   R++VL+  PW + N+L++ EK TG+  VS++ F  A FWV
Sbjct: 71  VEVESVGDNLFMFYFNNGEDRNRVLQRGPWHFGNSLIVLEKSTGEGNVSKLGFNRADFWV 130

Query: 122 RLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVK 181
           ++HD+P  C    +AK L K +G+ ++   E  +   GKF+ +KV IDI  PL+R LK+K
Sbjct: 131 QIHDIPILCMNRRTAKWLAKQIGEVVEIPSE-SRECWGKFMWVKVRIDILKPLKRWLKLK 190

Query: 182 SGAMADEKWVRISYEKLPDFCQGCGRIGHLASGC 216
            G   +   V + YEKLPDFC  CGR+G+    C
Sbjct: 191 IGQTDEVTLVSLKYEKLPDFCYACGRMGYGMKEC 222

[Close]

BLAST of Sed0000047 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-34
Identity = 75/214 (35.05%), Postives = 127/214 (59.35%), Query Frame = 0


Query: 2   ENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQK 61
           ENL L  ++A  V E+ ++ I + +  ++  +  K+L+  + + + FK LI +IWN   +
Sbjct: 11  ENLSLEDEDA-AVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQIWNQFGQ 70

Query: 62  VLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWV 121
           V +E VG N F+  F+N   R+KV    PW++  +L++ EK  G   +++++F  A FWV
Sbjct: 71  VEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKFNQADFWV 130

Query: 122 RLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVK 181
           ++HD+P  C  + + K L + +G+ ++   E  +   GK++R+KV +DI  PL+R L++K
Sbjct: 131 QIHDIPIMCMNQRTTKWLAEYIGEVVEIPTE-SRECWGKYVRVKVQVDITKPLKRWLRIK 190

Query: 182 SGAMADEKWVRISYEKLPDFCQGCGRIGHLASGC 216
            G   +   V + YE+LPDFC  CGRIGH    C
Sbjct: 191 LGKYEEITMVALKYERLPDFCFACGRIGHSVREC 222

[Close]

BLAST of Sed0000047 vs. ExPASy TrEMBL
Match: A0A5C7GZQ4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025894 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-32
Identity = 76/204 (37.25%), Postives = 112/204 (54.90%), Query Frame = 0


Query: 33  VACKILSENQSSPDVFKKLIPKIWNTEQKVLIESVGGNVFVCTFSNSVVRDKVLEASPWI 92
           +A K+LS    + + F  ++P+IW T ++  IE + GN+F  TF     R  VL   PW 
Sbjct: 41  LAGKLLSVKHVNREAFLSVLPRIWRTVKEFEIEILEGNIFSFTFKEESDRRSVLRGGPWS 100

Query: 93  YDNALLLFEKMTGDKRVSEMEFGFAAFWVRLHDVPPACHTENSAKGLGKLMGDFIKWDFE 152
           +D ALL+ E+ TG   + EM+F   AFW+++H VP  C T    + LG ++G+  + D  
Sbjct: 101 FDKALLVLEEPTGKGDIREMKFDKVAFWIQIHKVPLLCMTSEIGRFLGSMIGEVKEIDDG 160

Query: 153 GDQRNRGKFLRLKVSIDIRLPLRRALKVKSGAMADEKWVRISYEKLPDFCQGCGRIGHLA 212
           G     GK++R++V +D+  PLRR L+V       E  + + YE+LPD C  CGRIGH+ 
Sbjct: 161 GSGDCVGKYIRVRVVVDVTKPLRRMLRVDVLGDGKETNMLLRYERLPDHCYRCGRIGHVV 220

Query: 213 SGCTFV---VIGEGLRFPFGEDLR 234
             C+ V   V  E     FG  LR
Sbjct: 221 RDCSIVPSSVEPEDYNLMFGSWLR 244

[Close]

BLAST of Sed0000047 vs. ExPASy TrEMBL
Match: A0A5C7HJ97 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018426 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.2e-32
Identity = 75/214 (35.05%), Postives = 124/214 (57.94%), Query Frame = 0


Query: 2   ENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQK 61
           E+L +A +E + + E+ +    +    ++  +  K+LS  + + + FK LI +IWN   +
Sbjct: 11  ESLFIA-EEDRAILEMSEETSVDGVEDVDRCLVVKVLSGKKVNREAFKGLIEQIWNPNGQ 70

Query: 62  VLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWV 121
           V +E VG N F+  F N+  R++V    PW + N+L++ EK  G   +S++ F  A FWV
Sbjct: 71  VEVELVGDNRFMFYFINNEDRNRVWNRGPWHFGNSLIVLEKPVGPGNISKLSFNKADFWV 130

Query: 122 RLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVK 181
           ++HD+P  C    +AK L + +G+ ++   E  +   GKF+R+KV IDI  PL+R L++K
Sbjct: 131 QIHDIPILCMNRRTAKWLAEQIGEVVEIPLE-SRECWGKFMRVKVRIDILKPLKRWLRLK 190

Query: 182 SGAMADEKWVRISYEKLPDFCQGCGRIGHLASGC 216
            G   +   V + YE+LP+FC  CG+IGH    C
Sbjct: 191 LGKCDEITTVGLKYERLPEFCYACGKIGHGIKEC 222

[Close]

BLAST of Sed0000047 vs. ExPASy TrEMBL
Match: A0A5C7I2R5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010379 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-31
Identity = 75/214 (35.05%), Postives = 122/214 (57.01%), Query Frame = 0


Query: 2   ENLELAGQEAQGVFELEDNEISEYESVLENVVACKILSENQSSPDVFKKLIPKIWNTEQK 61
           ENL L   E + V E+ ++   E +  ++  +  K+LS  + + + FK LI +IWN    
Sbjct: 11  ENLTLV-DEDEAVLEMAEDFEQEGDEDVDRCLVGKVLSGKKVNREAFKGLIKQIWNPYGN 70

Query: 62  VLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWV 121
           V +E V  N+F   F+N   R++V    PW + N+L++ EK  G   ++++ F  A FW+
Sbjct: 71  VKVELVDDNIFTFHFANKEDRNRVWFRGPWHFGNSLIVLEKQMGLGNIAQLGFNKAEFWI 130

Query: 122 RLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVK 181
           ++HD+P +C    +AK L + +G+ ++   E  +  RGKF+R+KV IDI   L+R LK+K
Sbjct: 131 QIHDIPISCMNRRTAKWLTEQIGEVVEIPTE-SRECRGKFMRVKVRIDISKALKRWLKLK 190

Query: 182 SGAMADEKWVRISYEKLPDFCQGCGRIGHLASGC 216
                +   + + YE+LPDFC  CG+IGH    C
Sbjct: 191 LNRSEEITMMNLKYERLPDFCFACGKIGHCIREC 222

[Close]

BLAST of Sed0000047 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 71.2 bits (173), Expect = 2.4e-12
Identity = 46/199 (23.12%), Postives = 85/199 (42.71%), Query Frame = 0


Query: 52  IPKIWNTEQKVLIESVGGNVFVCTFSNSVVRDKVLEASPWIYDNALLLFEKMTGDKRVSE 111
           +P  W    +V    +    F   F + +     L  +PW+++   +  ++   +   +E
Sbjct: 58  LPYQWGLGTQVHGRILDDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRW--EDFPTE 117

Query: 112 MEFGFAAFWVRLHDVPPACHTENSAKGLGKLMGDFIKWDFEGDQRNRGKFLRLKVSIDIR 171
               F   WV +  +P    +E + + +   +G+ +  DF  +  ++  F+R+KV +D  
Sbjct: 118 DFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFT 177

Query: 172 LPLRRALKVKSGAMADEKWVRISYEKLPDFCQGCGRIGHLASGCTFVVIGEGLRFPFGED 231
            PLR   +V+  A  +   +   YEKL   C  C R+ H  S C +VV  E +     + 
Sbjct: 178 EPLRFFRRVRF-ASRERAMIGFEYEKLQRVCTNCCRVNHQVSHCPYVVHQEEMDNE-PDV 237

Query: 232 LREPTNYFKGDRSDFQRHG 251
           L  P  Y   D  + + HG
Sbjct: 238 LVSPERYDDEDSLNQEDHG 252

[Close]

BLAST of Sed0000047 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 51.2 bits (121), Expect = 2.6e-06
Identity = 31/131 (23.66%), Postives = 53/131 (40.46%), Query Frame = 0


Query: 85  VLEASPWIYDNALLLFEKMTGDKRVSEMEFGFAAFWVRLHDVPPACHTENSAKGLGKLMG 144
           +L   PW +++ + + ++ T  K  S+ EF    FW+++  +P    T      +G+ MG
Sbjct: 75  ILRRGPWSFNDWMCVIQRWT--KLHSDAEFKRIPFWIQIRGIPLRFLTARIITSIGERMG 134

Query: 145 DFIKWDFEGDQRNRGKFLRLKVSIDIRLPLRRALKVKSGAMADEKWVRISYEKLPDFCQG 204
            F+       + N G+                          D   ++  YEKL +FC  
Sbjct: 135 LFL-------ETNLGR--------------------------DVSVLKFQYEKLKNFCTT 170

Query: 205 CGRIGHLASGC 216
           CG + H AS C
Sbjct: 195 CGMLSHDASEC 170

[Close]

BLAST of Sed0000047 vs. TAIR 10
Match: AT5G32613.1 (Zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 47.8 bits (112), Expect = 2.9e-05
Identity = 32/129 (24.81%), Postives = 59/129 (45.74%), Query Frame = 0


Query: 105 GDKRVSEMEFGFAAFWVRLHDVPPACHTENSAKGLGKLMGDFIKWDFEG-DQRNRGKFLR 164
           G+  +   E   A  W  L +VPP  ++      +   +G+ +  +       N G+  +
Sbjct: 219 GESPLEPQELQTAQTWAILKNVPPQLYSLEGISVIASGIGEPLHTEKSRLGPVNIGR-TK 278

Query: 165 LKVSIDIRLPLRRALKVKSGAMADEKWVRISYEKLPDFCQGCGRIGHLASGCTFVVIGEG 224
           +KV  ++  PL  ++ V+     +   V ++Y + P  C  CGR GHL S C+  ++   
Sbjct: 279 VKVVTNLGTPLPDSIVVRD-VQGNTARVAVTYPRPPPKCLNCGRYGHLLSRCSKPLM--- 338

Query: 225 LRFPFGEDL 233
            + PF +DL
Sbjct: 339 KKLPFKKDL 342

The following BLAST results are available for this feature:

BLAST of Sed0000047 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG53376.1	2.8e-34	39.25	hypothetical protein EZV62_022545 [Acer yangbiense]	[more]
TXG48193.1	1.1e-33	35.05	hypothetical protein EZV62_027487 [Acer yangbiense]	[more]
TXG50019.1	5.8e-32	37.25	hypothetical protein EZV62_025894 [Acer yangbiense]	[more]
TXG57113.1	1.7e-31	35.05	hypothetical protein EZV62_018426 [Acer yangbiense]	[more]
TXG63385.1	2.2e-31	35.05	hypothetical protein EZV62_010379 [Acer yangbiense]	[more]

BLAST of Sed0000047 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0000047 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7HB59	1.3e-34	39.25	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1	[more]
A0A5C7GU64	5.1e-34	35.05	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748...	[more]
A0A5C7GZQ4	2.8e-32	37.25	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02589...	[more]
A0A5C7HJ97	8.2e-32	35.05	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01842...	[more]
A0A5C7I2R5	1.1e-31	35.05	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01037...	[more]

BLAST of Sed0000047 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36228.1	2.4e-12	23.12	nucleic acid binding;zinc ion binding	[more]
AT3G42140.1	2.6e-06	23.66	zinc ion binding;nucleic acid binding	[more]
AT5G32613.1	2.9e-05	24.81	Zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 437..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..260
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 5..269
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 168..216 e-value: 4.7E-11 score: 42.2
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 26..166 e-value: 6.0E-23 score: 81.0
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 5..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000047.1	Sed0000047.1	mRNA