Pay0022860 (gene) Melon (Payzawat) v1

Overview
NamePay0022860
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
DescriptionStress response protein nst1
Locationchr04: 11935574 .. 11935756 (-)
RNA-Seq ExpressionPay0022860
SyntenyPay0022860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAACTAGTGTGTTTGGAATGGGGAGTGTTTTGATAATGCTTGTGGTGGTTGGACTTGTTCTGTTTCTGCCGCTGTTGATCGGATCCCTTCAACCGCCGTCCGGCTTTCTTCTTCTCCTTTTTCCAGTCACTCTCGCCGCCGTGTTCTTCATCCTCTCACGTGCGTCCTCCCATTGA

mRNA sequence

ATGGAAGAAACTAGTGTGTTTGGAATGGGGAGTGTTTTGATAATGCTTGTGGTGGTTGGACTTGTTCTGTTTCTGCCGCTGTTGATCGGATCCCTTCAACCGCCGTCCGGCTTTCTTCTTCTCCTTTTTCCAGTCACTCTCGCCGCCGTGTTCTTCATCCTCTCACGTGCGTCCTCCCATTGA

Coding sequence (CDS)

ATGGAAGAAACTAGTGTGTTTGGAATGGGGAGTGTTTTGATAATGCTTGTGGTGGTTGGACTTGTTCTGTTTCTGCCGCTGTTGATCGGATCCCTTCAACCGCCGTCCGGCTTTCTTCTTCTCCTTTTTCCAGTCACTCTCGCCGCCGTGTTCTTCATCCTCTCACGTGCGTCCTCCCATTGA

Protein sequence

MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH
Homology
BLAST of Pay0022860 vs. ExPASy TrEMBL
Match: A0A5A7T8Q7 (Stress response protein nst1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001370 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-20
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60
          MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH
Sbjct: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60

BLAST of Pay0022860 vs. ExPASy TrEMBL
Match: A0A1S3BHY2 (uncharacterized protein LOC103490051 OS=Cucumis melo OX=3656 GN=LOC103490051 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-20
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60
          MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH
Sbjct: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60

BLAST of Pay0022860 vs. ExPASy TrEMBL
Match: A0A2P5EXP0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_139530 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-05
Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0

Query: 2  EETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASS 60
          ++  V G+ SV+++LVV  L+LFLPL +G +QPPS F LL+FP+ L  VF +LSRASS
Sbjct: 34 KDNGVCGVVSVVMILVVAALLLFLPLGMGPVQPPSAFTLLIFPLVLLVVFILLSRASS 91

BLAST of Pay0022860 vs. ExPASy TrEMBL
Match: A0A6P3ZL55 (stress response protein nst1 OS=Ziziphus jujuba OX=326968 GN=LOC107415812 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.0e-05
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0

Query: 3   ETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 61
           +  VFG GS+L+++VV  L+LFLPL +G++QPP  F LL  PV L  VF  LSRAS+H
Sbjct: 165 QDEVFGGGSILMIIVVGALLLFLPLTMGAVQPPPLFSLLAIPVFLLVVFIFLSRASTH 222

BLAST of Pay0022860 vs. ExPASy TrEMBL
Match: A0A2P5C9B1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_171750 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-04
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 0

Query: 2  EETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASS 60
          ++  V G+ SV+ +LVV  L+LFLPL +G +QPPS F LL+ P+ L  VF +LSRASS
Sbjct: 34 KDGGVCGVVSVVTILVVAALLLFLPLGMGPVQPPSAFTLLIVPLVLLVVFILLSRASS 91

BLAST of Pay0022860 vs. NCBI nr
Match: XP_008447644.1 (PREDICTED: uncharacterized protein LOC103490051 [Cucumis melo] >KAA0037855.1 stress response protein nst1 [Cucumis melo var. makuwa] >TYK09825.1 stress response protein nst1 [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 7.1e-20
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60
          MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH
Sbjct: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60

BLAST of Pay0022860 vs. NCBI nr
Match: XP_011652820.1 (uncharacterized protein LOC105435116 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 0

Query: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60
          MEET VFGMGSVLIMLVVVGLVL LPL+IGSLQPPSGFLLLLFPVTLAAVFFILSRASSH
Sbjct: 1  MEETGVFGMGSVLIMLVVVGLVLLLPLVIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60

BLAST of Pay0022860 vs. NCBI nr
Match: XP_038888108.1 (uncharacterized protein LOC120078008 [Benincasa hispida])

HSP 1 Score: 98.2 bits (243), Expect = 2.5e-17
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0

Query: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60
          ME+TSVFGMGSVL+MLVVVGLVLFLPL+IGSLQPPSG LLL+FPVTLAAVFF LSRASSH
Sbjct: 1  MEKTSVFGMGSVLMMLVVVGLVLFLPLVIGSLQPPSGLLLLIFPVTLAAVFFFLSRASSH 60

BLAST of Pay0022860 vs. NCBI nr
Match: KAE8650841.1 (hypothetical protein Csa_017605, partial [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 3.1e-15
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0

Query: 1  MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILS 56
          MEET VFGMGSVLIMLVVVGLVL LPL+IGSLQPPSGFLLLLFPVTLAAVFFILS
Sbjct: 1  MEETGVFGMGSVLIMLVVVGLVLLLPLVIGSLQPPSGFLLLLFPVTLAAVFFILS 55

BLAST of Pay0022860 vs. NCBI nr
Match: KAG7011309.1 (hypothetical protein SDJN02_26213, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.0 bits (214), Expect = 5.9e-14
Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 1   MEETSVFGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFILSRASSH 60
           M E SV GMGSVLIMLVVVG +LFLPL+IGS+QPPSG +LL+FPVTLAAVFF+LSRASS+
Sbjct: 52  MGENSVCGMGSVLIMLVVVGCILFLPLVIGSVQPPSGLMLLIFPVTLAAVFFLLSRASSN 111

BLAST of Pay0022860 vs. TAIR 10
Match: AT4G14315.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 39.7 bits (91), Expect = 1.0e-03
Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 0

Query: 7  FGMGSVLIMLVVVGLVLFLPLLIGSLQPPSGFLLLLFPVTLAAVFFIL 55
          FGMGSVL ++VV  ++LF+PL++G +  PS  ++L+FPV L  VF  L
Sbjct: 7  FGMGSVLAIVVVALMLLFVPLMMGPVTAPSLPMILMFPVVLLFVFLYL 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T8Q73.5e-20100.00Stress response protein nst1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S3BHY23.5e-20100.00uncharacterized protein LOC103490051 OS=Cucumis melo OX=3656 GN=LOC103490051 PE=... [more]
A0A2P5EXP03.1e-0555.17Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_139530 PE=4 SV... [more]
A0A6P3ZL557.0e-0555.17stress response protein nst1 OS=Ziziphus jujuba OX=326968 GN=LOC107415812 PE=4 S... [more]
A0A2P5C9B15.9e-0453.45Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_171750 PE... [more]
Match NameE-valueIdentityDescription
XP_008447644.17.1e-20100.00PREDICTED: uncharacterized protein LOC103490051 [Cucumis melo] >KAA0037855.1 str... [more]
XP_011652820.12.3e-1895.00uncharacterized protein LOC105435116 [Cucumis sativus][more]
XP_038888108.12.5e-1790.00uncharacterized protein LOC120078008 [Benincasa hispida][more]
KAE8650841.13.1e-1594.55hypothetical protein Csa_017605, partial [Cucumis sativus][more]
KAG7011309.15.9e-1480.00hypothetical protein SDJN02_26213, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT4G14315.11.0e-0350.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0022860.1Pay0022860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane