Pay0022840 (gene) Melon (Payzawat) v1

Overview


Name	Pay0022840
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	F-box domain-containing protein
Location	chr09: 595309 .. 596413 (+)
RNA-Seq Expression	Pay0022840
Synteny	Pay0022840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATATACCAAAACGATGATGTGGACAGAATCAGCCGTTTACCAGATTGTATTCTTCATGACATTCTATCCTTTTTAGAGACGAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCAATGGAAAACCCTGTTGACTCATATTCCCACACTCAACTTTAACTTTGATTTCATCCCGTATTTGTTAAAATTGTCACGCTCGTTCTTGGATATATCAACATCCTTTAAGCGTTTCATGTTGAGAGCTTTAACACAATATGGTGGTGAATATATTCAAAAATTGACTTACTCGTACTTGGAACTTGGTTAAGAGAGTTTCTTGACAAAAGCCTTATCTTATACGCCATTCCACAATGCTCAACAGCTTTACATTACCACTGACTATGCATTTGAATTGATGTGGTCATGTTTATCAGCTTGCAAATTGCTAACTGTGTTGAAGGTTAAACGTTTCGTTGGATCTCACTTGGAATCCATGGTGTTACCTTCTTTGAGAACGTTTATTTTGGATATTTGTGACGACTATTCTGACTACTACGATTACCAGGTGGACAATGATCAGGACGTCTATGACATACTGTTGAATGGAAATAGAGAGACATTATTCGATCATTTTATGGACTCATCCTAATTTCTTTTCATATATCTATTTCAATTCTGGTTCATCTGTCAAATTAGTCCTTCCTATTTGTTTTGGTGTTATATACTCGGCTCTTTTATTTCTACTAGTTTTTGAAGAAGTTGGGGAAATTTTTTTAAGGTAGGACTCATGCAACCATTGAAAGTTAAGTACTTTTGCCACATGGTTTTAATGGTTTTTCTTTTCAAGTTAAGGAAAGCCACGATTACTTTTGAAACAGAAAAATATTAGCAAACCAGGATAAATTCTATTTGTGCTCAACAGAAACCAAAGTGGTTTGTAGCAATCCCAAGTTGTTGGAAATAAAAAGAAAAATAACAAAATGCGATAATAAAAAAAGTAATCATCACAAATGATCACTTGCTTCCATATTTTCAACATCACCTACAGTTCTATGAAAATTGGAGATAAGTGTCTGGACAAGCTCGAACCTGTATCGTCTACTTGCTTCCATTTGTTTTGA

mRNA sequence

ATGTCAATATACCAAAACGATGATGTGGACAGAATCAGCCGTTTACCAGATTGTATTCTTCATGACATTCTATCCTTTTTAGAGACGAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCAATGGAAAACCCTGTTGACTCATATTCCCACACTCAACTTTAACTTTGATTTCATCCCGTATTTGTTAAAATTGTCACGCTCGTTCTTGGATATATCAACATCCTTTAAGCGTTTCATGTTGAGAGCTTTAACACAATATGGTGGTGAATATATTCAAAAATTGACTTACTCGTACTTGGAACTTGCTTGCAAATTGCTAACTGTGTTGAAGGTTAAACGTTTCGTTGGATCTCACTTGGAATCCATGGTGTTACCTTCTTTGAGAACGTTTATTTTGGATATTTGTGACGACTATTCTGACTACTACGATTACCAGGTGGACAATGATCAGGACGTCTATGACATACTTTCTATGAAAATTGGAGATAAGTGTCTGGACAAGCTCGAACCTGTATCGTCTACTTGCTTCCATTTGTTTTGA

Coding sequence (CDS)

ATGTCAATATACCAAAACGATGATGTGGACAGAATCAGCCGTTTACCAGATTGTATTCTTCATGACATTCTATCCTTTTTAGAGACGAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCAATGGAAAACCCTGTTGACTCATATTCCCACACTCAACTTTAACTTTGATTTCATCCCGTATTTGTTAAAATTGTCACGCTCGTTCTTGGATATATCAACATCCTTTAAGCGTTTCATGTTGAGAGCTTTAACACAATATGGTGGTGAATATATTCAAAAATTGACTTACTCGTACTTGGAACTTGCTTGCAAATTGCTAACTGTGTTGAAGGTTAAACGTTTCGTTGGATCTCACTTGGAATCCATGGTGTTACCTTCTTTGAGAACGTTTATTTTGGATATTTGTGACGACTATTCTGACTACTACGATTACCAGGTGGACAATGATCAGGACGTCTATGACATACTTTCTATGAAAATTGGAGATAAGTGTCTGGACAAGCTCGAACCTGTATCGTCTACTTGCTTCCATTTGTTTTGA

Protein sequence

MSIYQNDDVDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRSFLDISTSFKRFMLRALTQYGGEYIQKLTYSYLELACKLLTVLKVKRFVGSHLESMVLPSLRTFILDICDDYSDYYDYQVDNDQDVYDILSMKIGDKCLDKLEPVSSTCFHLF

Homology

[Close]

BLAST of Pay0022840 vs. ExPASy Swiss-Prot
Match: Q9FWZ1 (F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBL13 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-08
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 6  NDDVDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNF-NFDFIPY--L 65
          +D+VD IS+LPDC+L ++L  L TK VV+T VLS++W+ L  H+P L+  N DF  +   
Sbjct: 14 SDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDNTDFQEFNTF 73

Query: 66 LKLSRSFLDISTS--FKRFMLR 83
          L    SFLD ++    ++F+L+
Sbjct: 74 LSFVDSFLDFNSESFLQKFILK 95

[Close]

BLAST of Pay0022840 vs. ExPASy Swiss-Prot
Match: O23257 (Putative F-box/LRR-repeat protein At4g13960 OS=Arabidopsis thaliana OX=3702 GN=At4g13960 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-08
Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 9  VDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRS 68
          +D +S LPD +L+ ILSFL TK+   T +LSK+W+ L T +P L+ +     +  +    
Sbjct: 1  MDHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKED 60

Query: 69 FLDISTSFKRFMLRALTQYGGEYIQKLT 97
            +I  SF +F+ R L   G   I+KL+
Sbjct: 61 RYEIQKSFMKFVDRVLALQGNSPIKKLS 88

[Close]

BLAST of Pay0022840 vs. ExPASy Swiss-Prot
Match: Q9FJ30 (Putative F-box/LRR-repeat protein At5g41840 OS=Arabidopsis thaliana OX=3702 GN=At5g41840 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.4e-07
Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 10 DRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRSF 69
          DRIS LPD ++  ILSFL TK+   T VL+K+WK LL  +P LNF+ D I +  +  R+ 
Sbjct: 14 DRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFD-DSIYFHPRARRN- 73

Query: 70 LDISTSFKRFM 81
             S S++ FM
Sbjct: 74 -KYSKSYESFM 81

[Close]

BLAST of Pay0022840 vs. ExPASy Swiss-Prot
Match: Q9LX51 (F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana OX=3702 GN=At3g59200 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.7e-07
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 10 DRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRSF 69
          DRIS LP+ ++  ILSFL TK+   T VLSK+W+ L  ++   N +FD   Y     +S 
Sbjct: 7  DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYV--TNLDFDDSDYQDGKPKSD 66

Query: 70 LDISTSFKRFMLRALTQYGGEYIQKLT 97
          +++S SF  F+ R L   G   + K +
Sbjct: 67 VELSRSFMEFVDRVLALQGNGSVNKFS 91

[Close]

BLAST of Pay0022840 vs. ExPASy Swiss-Prot
Match: Q9M190 (Putative F-box/LRR-repeat protein At3g42770 OS=Arabidopsis thaliana OX=3702 GN=At3g42770 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 36/107 (33.64%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 15  LPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRSFLDIST 74
           LPD +L  ILSFL TK+   T +LSK+W+TL T  P L+F+   +    K   +  +I  
Sbjct: 4   LPDELLVQILSFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKKRKWNMRNIQK 63

Query: 75  SFKRFMLRALTQYGGEYIQKLTYSYLELACKLLTVLKVKRFVGSHLE 122
           SF  F+   L   GG+ I+  +  + E    +   + V R++ + LE
Sbjct: 64  SFVGFVDSTLALQGGKGIKSFSLKFKETLGDVNGEVDVNRWICNALE 110

[Close]

BLAST of Pay0022840 vs. ExPASy TrEMBL
Match: A0A0A0KSU4 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650450 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.2e-29
Identity = 79/131 (60.31%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 64  KLSRSFLDISTSFKRFMLRALTQYGGEYIQKLTYSYLEL--------------------- 123
           K  RSFLD+STSF RFMLRALTQ+GGE+IQKL YSYLE                      
Sbjct: 545 KSPRSFLDVSTSFNRFMLRALTQHGGEFIQKLIYSYLEFGEESFLTKALPYTPFHKAQQL 604

Query: 124 ----------------ACKLLTVLKVKRFVGSHLESMVLPSLRTFILDICDDYSDYYDYQ 158
                           ACKLLTVL  K FVGSHLESMVLPSLR F+LDICDDYSDYYDYQ
Sbjct: 605 YITTDYAFESMWSCLSACKLLTVLNGKCFVGSHLESMVLPSLRMFVLDICDDYSDYYDYQ 664

[Close]

BLAST of Pay0022840 vs. ExPASy TrEMBL
Match: A0A0A0KSW6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.4e-16
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 10  DRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFD--FIPYLLKLSR 69
           DRIS LPDC+LH+ILSFL TK VVQTCVLSK+WKTL T IPTLNF+++  +   + K   
Sbjct: 12  DRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTEE 71

Query: 70  SFLDISTSFKRFMLRALTQYGGEYIQKLTYS 99
             +   TSFK F++R L++   + I+KL Y+
Sbjct: 72  DDISKQTSFKNFIIRVLSKLRTKSIRKLAYT 102

[Close]

BLAST of Pay0022840 vs. ExPASy TrEMBL
Match: A0A6J1CJ42 (F-box/FBD/LRR-repeat protein At1g16930-like OS=Momordica charantia OX=3673 GN=LOC111012076 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.1e-16
Identity = 64/164 (39.02%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 8   DVDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSR 67
           DVDRIS LPD +LH ILS L TK  VQTCVLSK+W+++   IPTLNF+FD  P+      
Sbjct: 2   DVDRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRN 61

Query: 68  SFLDISTSFKRFMLRALTQYGGEYIQKLTYS----------------------------- 127
           +      SFKRF+ + ++++ G YIQKL+YS                             
Sbjct: 62  NPKSKEKSFKRFIFKVMSEHRG-YIQKLSYSSPRFHGMNVMTLSICYAQCHNVKELYITA 121

Query: 128 -------YLELACKLLTVLKVKRFVGSH-LESMVLPSLRTFILD 135
                  +   AC  LTVLKV   +  H L S+VLP LR  +++
Sbjct: 122 DSYDSTIWCLSACDFLTVLKVSHVLVYHDLGSLVLPCLRILVVE 164

[Close]

BLAST of Pay0022840 vs. ExPASy TrEMBL
Match: A0A6J1CJ18 (LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820 OS=Momordica charantia OX=3673 GN=LOC111012046 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-15
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 9   VDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRS 68
           +DRIS LPD +LH ILS L T+QVVQTCVLSK+WKTL T IPTLNF+FD  P+   +  S
Sbjct: 11  LDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNS 70

Query: 69  FLD--ISTSFKRFMLRALTQYGGEYIQKLTYS 99
                   SF+RF+LR L+++G + I  L +S
Sbjct: 71  SASNPKEPSFERFILRVLSEHGCKNIITLNFS 102

[Close]

BLAST of Pay0022840 vs. ExPASy TrEMBL
Match: A0A6J1CJT8 (F-box/FBD/LRR-repeat protein At2g04230-like OS=Momordica charantia OX=3673 GN=LOC111012079 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-15
Identity = 60/158 (37.97%), Postives = 80/158 (50.63%), Query Frame = 0


Query: 7   DDVDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLS 66
           ++ DRIS LPDC+L  ILS +  KQVVQTCVLSK+WKTL THIP LNF  D     +  +
Sbjct: 10  EEDDRISLLPDCLLRQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSN 69

Query: 67  RSFLDISTSFKRFMLRALTQYGGEYIQKLTY----------------------------- 126
                  T FK F++R L+++ GE+IQKL+Y                             
Sbjct: 70  HK----PTCFKHFVIRVLSEHRGEHIQKLSYVGHDDLLAESLICHARRHNVGEIYIHTYV 129

Query: 127 ------SYLELACKLLTVLKVKRFVGSHLESMVLPSLR 130
                  +    C  LTVLK+   V  +L ++ LPSL+
Sbjct: 130 NGFRNTKHCLSGCSSLTVLKISCGVADYLGALALPSLK 163

[Close]

BLAST of Pay0022840 vs. NCBI nr
Match: KAE8649007.1 (hypothetical protein Csa_008094 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 6.6e-29
Identity = 79/131 (60.31%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 64  KLSRSFLDISTSFKRFMLRALTQYGGEYIQKLTYSYLEL--------------------- 123
           K  RSFLD+STSF RFMLRALTQ+GGE+IQKL YSYLE                      
Sbjct: 499 KSPRSFLDVSTSFNRFMLRALTQHGGEFIQKLIYSYLEFGEESFLTKALPYTPFHKAQQL 558

Query: 124 ----------------ACKLLTVLKVKRFVGSHLESMVLPSLRTFILDICDDYSDYYDYQ 158
                           ACKLLTVL  K FVGSHLESMVLPSLR F+LDICDDYSDYYDYQ
Sbjct: 559 YITTDYAFESMWSCLSACKLLTVLNGKCFVGSHLESMVLPSLRMFVLDICDDYSDYYDYQ 618

[Close]

BLAST of Pay0022840 vs. NCBI nr
Match: KAE8649006.1 (hypothetical protein Csa_008454 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-16
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 10  DRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFD--FIPYLLKLSR 69
           DRIS LPDC+LH+ILSFL TK VVQTCVLSK+WKTL T IPTLNF+++  +   + K   
Sbjct: 12  DRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTEE 71

Query: 70  SFLDISTSFKRFMLRALTQYGGEYIQKLTYS 99
             +   TSFK F++R L++   + I+KL Y+
Sbjct: 72  DDISKQTSFKNFIIRVLSKLRTKSIRKLAYT 102

[Close]

BLAST of Pay0022840 vs. NCBI nr
Match: XP_004141639.1 (F-box/LRR-repeat protein At3g26922 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-16
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0


Query: 10  DRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFD--FIPYLLKLSR 69
           DRIS LPDC+LH+ILSFL TK VVQTCVLSK+WKTL T IPTLNF+++  +   + K   
Sbjct: 12  DRISLLPDCLLHEILSFLNTKSVVQTCVLSKRWKTLWTEIPTLNFDYNSSYSFSIFKTEE 71

Query: 70  SFLDISTSFKRFMLRALTQYGGEYIQKLTYS 99
             +   TSFK F++R L++   + I+KL Y+
Sbjct: 72  DDISKQTSFKNFIIRVLSKLRTKSIRKLAYT 102

[Close]

BLAST of Pay0022840 vs. NCBI nr
Match: XP_022141790.1 (F-box/FBD/LRR-repeat protein At1g16930-like [Momordica charantia])

HSP 1 Score: 95.1 bits (235), Expect = 6.5e-16
Identity = 64/164 (39.02%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 8   DVDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSR 67
           DVDRIS LPD +LH ILS L TK  VQTCVLSK+W+++   IPTLNF+FD  P+      
Sbjct: 2   DVDRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRN 61

Query: 68  SFLDISTSFKRFMLRALTQYGGEYIQKLTYS----------------------------- 127
           +      SFKRF+ + ++++ G YIQKL+YS                             
Sbjct: 62  NPKSKEKSFKRFIFKVMSEHRG-YIQKLSYSSPRFHGMNVMTLSICYAQCHNVKELYITA 121

Query: 128 -------YLELACKLLTVLKVKRFVGSH-LESMVLPSLRTFILD 135
                  +   AC  LTVLKV   +  H L S+VLP LR  +++
Sbjct: 122 DSYDSTIWCLSACDFLTVLKVSHVLVYHDLGSLVLPCLRILVVE 164

[Close]

BLAST of Pay0022840 vs. NCBI nr
Match: XP_038890212.1 (F-box/FBD/LRR-repeat protein At5g56420-like [Benincasa hispida])

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-15
Identity = 50/98 (51.02%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 8   DVDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPY----LL 67
           D+D IS LPD +LH+IL+ L+T+QVVQTCVLSK+WK+L THIPTLNF++   P+    + 
Sbjct: 2   DMDGISHLPDYLLHEILALLDTRQVVQTCVLSKRWKSLWTHIPTLNFDYSSFPFQRLPIK 61

Query: 68  KLSRSFL--DISTSFKRFMLRALTQYGGEYIQKLTYSY 100
            L  +F     + SF+RF+   L Q+  E I+KL+YSY
Sbjct: 62  DLFNNFTLSSKACSFERFISGVLEQHRSECIKKLSYSY 99

[Close]

BLAST of Pay0022840 vs. TAIR 10
Match: AT1G69630.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0


Query: 6  NDDVDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNF-NFDFIPY--L 65
          +D+VD IS+LPDC+L ++L  L TK VV+T VLS++W+ L  H+P L+  N DF  +   
Sbjct: 14 SDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDNTDFQEFNTF 73

Query: 66 LKLSRSFLDISTS--FKRFMLR 83
          L    SFLD ++    ++F+L+
Sbjct: 74 LSFVDSFLDFNSESFLQKFILK 95

[Close]

BLAST of Pay0022840 vs. TAIR 10
Match: AT4G13960.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 9  VDRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRS 68
          +D +S LPD +L+ ILSFL TK+   T +LSK+W+ L T +P L+ +     +  +    
Sbjct: 1  MDHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKED 60

Query: 69 FLDISTSFKRFMLRALTQYGGEYIQKLT 97
            +I  SF +F+ R L   G   I+KL+
Sbjct: 61 RYEIQKSFMKFVDRVLALQGNSPIKKLS 88

[Close]

BLAST of Pay0022840 vs. TAIR 10
Match: AT3G52670.1 (FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 10  DRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRSF 69
           DR+++LP+ ++  ILSFL T+ V+ T VLSKQW++L   +P L F+ D   Y +      
Sbjct: 10  DRMNQLPEDLILRILSFLPTELVIATSVLSKQWRSLWKLVPNLEFDSD--DYEINPVDIG 69

Query: 70  LDISTSFKRFMLRALTQYGGEYIQKLTYSYLELACKLLTVLKVKRFVGSHLE---SMVLP 129
           L I  +F R  LR L  Y      K T+++    C   T+  +K  +G H++    ++L 
Sbjct: 70  LWIGIAFARH-LRELVLY---VAPKQTFTFPSSLCICNTLETLKLILGIHVDIPCPVLLK 129

Query: 130 SLRTFILD 135
           SLRT  LD
Sbjct: 130 SLRTLHLD 131

[Close]

BLAST of Pay0022840 vs. TAIR 10
Match: AT5G41840.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-08
Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 10 DRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRSF 69
          DRIS LPD ++  ILSFL TK+   T VL+K+WK LL  +P LNF+ D I +  +  R+ 
Sbjct: 14 DRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFD-DSIYFHPRARRN- 73

Query: 70 LDISTSFKRFM 81
             S S++ FM
Sbjct: 74 -KYSKSYESFM 81

[Close]

BLAST of Pay0022840 vs. TAIR 10
Match: AT3G59200.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.0e-08
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 10 DRISRLPDCILHDILSFLETKQVVQTCVLSKQWKTLLTHIPTLNFNFDFIPYLLKLSRSF 69
          DRIS LP+ ++  ILSFL TK+   T VLSK+W+ L  ++   N +FD   Y     +S 
Sbjct: 7  DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYV--TNLDFDDSDYQDGKPKSD 66

Query: 70 LDISTSFKRFMLRALTQYGGEYIQKLT 97
          +++S SF  F+ R L   G   + K +
Sbjct: 67 VELSRSFMEFVDRVLALQGNGSVNKFS 91

The following BLAST results are available for this feature:

BLAST of Pay0022840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FWZ1	3.0e-08	42.68	F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBL13 PE=2 SV=1	[more]
O23257	3.0e-08	36.36	Putative F-box/LRR-repeat protein At4g13960 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9FJ30	4.4e-07	46.48	Putative F-box/LRR-repeat protein At5g41840 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9LX51	5.7e-07	37.93	F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana OX=3702 GN=At3g59200 ...	[more]
Q9M190	1.3e-06	33.64	Putative F-box/LRR-repeat protein At3g42770 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of Pay0022840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSU4	3.2e-29	60.31	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650450 PE=4 ...	[more]
A0A0A0KSW6	2.4e-16	53.85	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650430 PE=4 ...	[more]
A0A6J1CJ42	3.1e-16	39.02	F-box/FBD/LRR-repeat protein At1g16930-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1CJ18	1.2e-15	54.35	LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820 OS=Momordic...	[more]
A0A6J1CJT8	5.9e-15	37.97	F-box/FBD/LRR-repeat protein At2g04230-like OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Pay0022840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649007.1	6.6e-29	60.31	hypothetical protein Csa_008094 [Cucumis sativus]	[more]
KAE8649006.1	4.9e-16	53.85	hypothetical protein Csa_008454 [Cucumis sativus]	[more]
XP_004141639.1	4.9e-16	53.85	F-box/LRR-repeat protein At3g26922 [Cucumis sativus]	[more]
XP_022141790.1	6.5e-16	39.02	F-box/FBD/LRR-repeat protein At1g16930-like [Momordica charantia]	[more]
XP_038890212.1	1.9e-15	51.02	F-box/FBD/LRR-repeat protein At5g56420-like [Benincasa hispida]	[more]

BLAST of Pay0022840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69630.1	2.1e-09	42.68	F-box/RNI-like superfamily protein	[more]
AT4G13960.1	2.1e-09	36.36	F-box/RNI-like superfamily protein	[more]
AT3G52670.1	1.4e-08	35.94	FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein	[more]
AT5G41840.1	3.1e-08	46.48	F-box/RNI-like superfamily protein	[more]
AT3G59200.1	4.0e-08	37.93	F-box/RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 15..56 e-value: 0.0049 score: 26.1
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 11..49 e-value: 2.4E-8 score: 33.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 9..59 score: 10.186324
None	No IPR available	GENE3D	1.20.1280.50		coord: 2..52 e-value: 3.1E-7 score: 32.0
None	No IPR available	PANTHER	PTHR32212	CYCLIN-LIKE F-BOX	coord: 6..128
None	No IPR available	PANTHER	PTHR32212:SF234	F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN	coord: 6..128
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 9..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0022840.1	Pay0022840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding