Pay0022315 (gene) Melon (Payzawat) v1

Overview


Name	Pay0022315
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	DNA-directed DNA polymerase
Location	chr05: 17070459 .. 17070880 (-)
RNA-Seq Expression	Pay0022315
Synteny	Pay0022315

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCGTACGTAAAATTCTTGAAAGATATTTTCACGAAGAAACGAAAGATGACAGAATGTGAGATTGTAGCTCTAATGCAGGTAATAATCGATGTCTTCAAGAATGGGGTACCAGAGAATATGAAAGATCCTGAAAGCTTCACGGTGCCTTGCTCAATAGGCAACGTGAATCTTGGTCGCTCGTTATTTGATCTTGGAGCAAGTATCAATTATATTTGATGCCTTTCTCTGTCTTCAAGAAGTTGGGAATAGCGAAAACTTAACCGACCAAAATGGCACTCAGTTTCACTGATAGATCCATAGCACGACTAGAGGAAAAAATTAAAGATGTATTGATTAAGGTGGACAAATTCATATTTTTCGCAGACTTCGTTATCCTAGACTATATGAAGCTGATCGAGAGGTTTCAATCATTTTAG

mRNA sequence

ATGCCTTCGTACGTAAAATTCTTGAAAGATATTTTCACGAAGAAACGAAAGATGACAGAATGTGAGATTGTAGCTCTAATGCAGGTAATAATCGATGTCTTCAAGAATGGGGTACCAGAGAATATGAAAGATCCTGAAAGCTTCACGGTGCCTTGCTCAATAGGCAACGTGAATCTTGGTCGCTCGTTATTTGATCTTGGAGCAACACGACTAGAGGAAAAAATTAAAGATGTATTGATTAAGGTGGACAAATTCATATTTTTCGCAGACTTCGTTATCCTAGACTATATGAAGCTGATCGAGAGGTTTCAATCATTTTAG

Coding sequence (CDS)

ATGCCTTCGTACGTAAAATTCTTGAAAGATATTTTCACGAAGAAACGAAAGATGACAGAATGTGAGATTGTAGCTCTAATGCAGGTAATAATCGATGTCTTCAAGAATGGGGTACCAGAGAATATGAAAGATCCTGAAAGCTTCACGGTGCCTTGCTCAATAGGCAACGTGAATCTTGGTCGCTCGTTATTTGATCTTGGAGCAACACGACTAGAGGAAAAAATTAAAGATGTATTGATTAAGGTGGACAAATTCATATTTTTCGCAGACTTCGTTATCCTAGACTATATGAAGCTGATCGAGAGGTTTCAATCATTTTAG

Protein sequence

MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLGRSLFDLGATRLEEKIKDVLIKVDKFIFFADFVILDYMKLIERFQSF

Homology

[Close]

BLAST of Pay0022315 vs. ExPASy TrEMBL
Match: A0A5D3BKH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00080 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.0e-22
Identity = 64/128 (50.00%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 1   MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLG 60
           MPSY+KFLK I  KKRK+ + E VAL Q   DVFKNGVP+ M D  SF V CSIG ++LG
Sbjct: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60

Query: 61  RSLFDLGAT--------------------------------RLEEKIKDVLIKVDKFIFF 97
           R+L+ LGA+                                +LEEKI+DVL+KVDKF+F 
Sbjct: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120

[Close]

BLAST of Pay0022315 vs. ExPASy TrEMBL
Match: A0A1S3C108 (uncharacterized protein LOC103495785 OS=Cucumis melo OX=3656 GN=LOC103495785 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.0e-22
Identity = 64/128 (50.00%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 1   MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLG 60
           MPSY+KFLK I  KKRK+ + E VAL Q   DVFKNGVP+ M D  SF V CSIG ++LG
Sbjct: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60

Query: 61  RSLFDLGAT--------------------------------RLEEKIKDVLIKVDKFIFF 97
           R+L+ LGA+                                +LEEKI+DVL+KVDKF+F 
Sbjct: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120

[Close]

BLAST of Pay0022315 vs. ExPASy TrEMBL
Match: A0A5D3DPZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00150 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-20
Identity = 61/109 (55.96%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 1   MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLG 60
           M SY+KFLKDI  KKRK+ + E VAL Q   D FKNGVPE M DP SFTV  S G ++LG
Sbjct: 1   MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60

Query: 61  RSLFDLGATRL-------------EEKIKDVLIKVDKFIFFADFVILDY 97
            +L DLGA+               E KI+DVL+KVDKF+F  DFVILDY
Sbjct: 61  CALCDLGASINLMPLSIFKKVGIGEGKIEDVLVKVDKFLFSEDFVILDY 109

[Close]

BLAST of Pay0022315 vs. ExPASy TrEMBL
Match: A0A5D3DF12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00350 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.0e-20
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 18 MTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLGRSLFDLGAT 70
          MTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNV+LGRSLFDLGA+
Sbjct: 1  MTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVDLGRSLFDLGAS 52

[Close]

BLAST of Pay0022315 vs. ExPASy TrEMBL
Match: A0A1S4E2V6 (uncharacterized protein LOC107991723 OS=Cucumis melo OX=3656 GN=LOC107991723 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.2e-19
Identity = 58/128 (45.31%), Postives = 74/128 (57.81%), Query Frame = 0


Query: 1   MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLG 60
           MPSYVKFLKDI  KK ++ + + VALMQ   DVF+NGVP  M DP SF + CSIG ++LG
Sbjct: 56  MPSYVKFLKDILAKKSRLNDFQTVALMQETSDVFRNGVPRKMTDPRSFMILCSIGWMDLG 115

Query: 61  RSLFDLGA--------------------------------TRLEEKIKDVLIKVDKFIFF 97
             L+DLGA                                T+ ++ I+D+L KVDKF+F 
Sbjct: 116 CVLYDLGASINLMPLYIFKKLEMGEVQPTHMRLQFADRSITKPKDTIEDILAKVDKFLFL 175

[Close]

BLAST of Pay0022315 vs. NCBI nr
Match: XP_008455671.1 (PREDICTED: uncharacterized protein LOC103495785 [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-21
Identity = 64/128 (50.00%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 1   MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLG 60
           MPSY+KFLK I  KKRK+ + E VAL Q   DVFKNGVP+ M D  SF V CSIG ++LG
Sbjct: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60

Query: 61  RSLFDLGAT--------------------------------RLEEKIKDVLIKVDKFIFF 97
           R+L+ LGA+                                +LEEKI+DVL+KVDKF+F 
Sbjct: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120

[Close]

BLAST of Pay0022315 vs. NCBI nr
Match: TYJ99636.1 (uncharacterized protein E5676_scaffold562G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-21
Identity = 64/128 (50.00%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 1   MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLG 60
           MPSY+KFLK I  KKRK+ + E VAL Q   DVFKNGVP+ M D  SF V CSIG ++LG
Sbjct: 1   MPSYIKFLKGILAKKRKINDFETVALTQTTSDVFKNGVPKKMTDLGSFIVSCSIGGMDLG 60

Query: 61  RSLFDLGAT--------------------------------RLEEKIKDVLIKVDKFIFF 97
           R+L+ LGA+                                +LEEKI+DVL+KVDKF+F 
Sbjct: 61  RALYKLGASINLMYLFIFKKLRIEEVQSSHMRLSFADRSFAKLEEKIEDVLVKVDKFLFS 120

[Close]

BLAST of Pay0022315 vs. NCBI nr
Match: KAA0035429.1 (uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa] >TYK25723.1 uncharacterized protein E5676_scaffold862G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 7.4e-20
Identity = 61/109 (55.96%), Postives = 71/109 (65.14%), Query Frame = 0


Query: 1   MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLG 60
           M SY+KFLKDI  KKRK+ + E VAL Q   D FKNGVPE M DP SFTV  S G ++LG
Sbjct: 1   MSSYIKFLKDILAKKRKINDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLG 60

Query: 61  RSLFDLGATRL-------------EEKIKDVLIKVDKFIFFADFVILDY 97
            +L DLGA+               E KI+DVL+KVDKF+F  DFVILDY
Sbjct: 61  CALCDLGASINLMPLSIFKKVGIGEGKIEDVLVKVDKFLFSEDFVILDY 109

[Close]

BLAST of Pay0022315 vs. NCBI nr
Match: KAA0032227.1 (uncharacterized protein E6C27_scaffold219G00420 [Cucumis melo var. makuwa] >TYK22174.1 uncharacterized protein E5676_scaffold333G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 18 MTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLGRSLFDLGAT 70
          MTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNV+LGRSLFDLGA+
Sbjct: 1  MTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVDLGRSLFDLGAS 52

[Close]

BLAST of Pay0022315 vs. NCBI nr
Match: XP_038885952.1 (uncharacterized protein LOC120076255 [Benincasa hispida])

HSP 1 Score: 105.5 bits (262), Expect = 2.8e-19
Identity = 62/128 (48.44%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 1   MPSYVKFLKDIFTKKRKMTECEIVALMQVIIDVFKNGVPENMKDPESFTVPCSIGNVNLG 60
           MPSYVKFLKDI T KRK+ E E VAL      +F+N +P  MKDPESFT+PCSIG   + 
Sbjct: 211 MPSYVKFLKDILTNKRKIGENETVALTYECSALFQNSIPTKMKDPESFTLPCSIGGKEVK 270

Query: 61  RSLFDLGA--------------------------------TRLEEKIKDVLIKVDKFIFF 97
            +L DLGA                                T  E KIKDVL++VDKFIF 
Sbjct: 271 NALCDLGASINLMPLSIFKKLHIDKARPTTVTLQLTDRSITHPEGKIKDVLVQVDKFIFP 330

The following BLAST results are available for this feature:

BLAST of Pay0022315 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0022315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKH1	5.0e-22	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C108	5.0e-22	50.00	uncharacterized protein LOC103495785 OS=Cucumis melo OX=3656 GN=LOC103495785 PE=...	[more]
A0A5D3DPZ2	3.6e-20	55.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DF12	8.0e-20	96.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E2V6	5.2e-19	45.31	uncharacterized protein LOC107991723 OS=Cucumis melo OX=3656 GN=LOC107991723 PE=...	[more]

BLAST of Pay0022315 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455671.1	1.0e-21	50.00	PREDICTED: uncharacterized protein LOC103495785 [Cucumis melo]	[more]
TYJ99636.1	1.0e-21	50.00	uncharacterized protein E5676_scaffold562G00080 [Cucumis melo var. makuwa]	[more]
KAA0035429.1	7.4e-20	55.96	uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa] >TYK2...	[more]
KAA0032227.1	1.6e-19	96.15	uncharacterized protein E6C27_scaffold219G00420 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_038885952.1	2.8e-19	48.44	uncharacterized protein LOC120076255 [Benincasa hispida]	[more]

BLAST of Pay0022315 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33067	FAMILY NOT NAMED	coord: 4..68
None	No IPR available	PANTHER	PTHR33067:SF28	SUBFAMILY NOT NAMED	coord: 4..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0022315.1	Pay0022315.1	mRNA