Pay0022275 (gene) Melon (Payzawat) v1

Overview


Name	Pay0022275
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	photosynthetic NDH subunit of lumenal location 1, chloroplastic
Location	chr09: 6076483 .. 6081779 (+)
RNA-Seq Expression	Pay0022275
Synteny	Pay0022275

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAATCCATTCTTAAAAATTGGGACTAAAGAAAAAGACAATTTTCTCCCATTCATTTTATCCAATTGAACGTAAGAAAATTTCCCAAAAGTAAGGAAGAAAGAAAAGAAACAACAGCAGAAAGAGTGTGGAATATGACCACAAAAACCCAACCCAATTAGATATACCATTCTCGGCTTCCATTTTCCAATTTTCCATTTTATGAGAGCTTCTCTTTATCAGATATGGCCGTTTCAACCTCTTGCCTGAGTTGGGTTCCCACCACTGCATCCAATTGGAAGGTTAGTCTATTTATTTTTATTTTCCGATCTTGCAGGACCCAATTCTTCCTTCTCATTCTACTTTAATTCCAGCTGAAGTTGCTTCCTTTCAATGAGCCTACAACAGCTACTTCTTCATTTTCTTCCTCTAGTACCATCAATTGCTCAATTGAGAGAACTTCTCGTGATGAAGGTAAGATTTGCAATCTTGAGTTCAGTGCTTTGAATCCAGGAGCTGTGTTAGAGATTTGTAGTTTCAGAATGACTGCCATGCTGATTTTAAAAGAATGTGGTTTTCCATTTGGTTTTGTTACTTGTAGGATGGAAATGTTTATTTGGTACTTATTTGGATTGCTTATCTTGGAATTCGCGAGTAAATTTAGAGTTCTGTCTGTAGTTATATGAACTTTGTAGCTTGCATACAAGATGTTTGTAGAAATTTGTAAACCGAAATTGCTTAGAAGAAATGGGTTCAAAATCATTATGGTAACCTTCTTGGGATTGAAGTGTTACGAGTTTACTTGGCCACCAAATGTAGTACTGACTTAGGTAGTTTTTTGGCTTTTATAGTGGGATTGTTCACCTCTTGTGGATTTTGATTCAGTTCTACTTGGAGCTTTTCTTTTCCTCCCTTGTAGTTGCTTCTTGAGCCTGGATATCCTTAATGATCCGTGGTAATATGATGATAATTAACATTTAGGCATTTACAATAGAAGGCCGCTTTTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTGGGTGCGAGTCCCCTCTTTGCTCAAGGTATAAATTTTCAACTTTCTCTAATGATCTAATGTTGGATTCTAAACTAATATTGTGATTGTTATGTGTAGAAGTCCCAAAGAATTATCGAGCATTTGTAGACTATACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGTGAGAAAATTTCAATTTGCAGAAACATGAGATGCATGTAGTAACGCAAAAAATATACTAAAACAACAGTTTCCAAACGTTCCTTGTCTAGGAATTTGATTTTCGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGACATCCATGAAGAAGGGCCATTAGATGAGGTAAAAGAACCTTCCATCTACATCACATTTCAAAATCTGATAAAAGAAGTATGAACAGTTTAACATGACTGATGCAGGTTGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGTTACCATATATGACATGAAGGAGGTTTGCACTTTTCTGTCTCTGAGATCAATTGGTCCATGTAATATTATCTTGAAATTTGTTTCTGTGACATCTTTTTTTATCTTTTATTCTCTTGTTTTAGCGAACGATTGATGGGAAAAATTATTACACCTTTGAGTATAAACTTAGTTCTAGAGCATTCTCCCGCACCGCCTTTGCAACCATAGCCATTGCAAACGGTAAGCTCATATTTTATTAGAATTTTAGACCGTTCCATTTTTTTTTTTTTTTATTTATTTATCAGCTGTAAATCCCATGTTTTTTTAACTATAGGATAGTTTACCCAAAACAAGTTATAAAGAATATCAAATTGAGCTATTCAGTTTAGAAAGAGAGAGAACTGGAAATTTTTCAAACAACAGAATTGAAGTTAACCAAACTCATTTTATCAATTTGTATTATGCAATTCCGTACTAACTCATATCTAACCTATACTTTTAGTTTTTGGAGTGAATATAATTCGATTTATGTTAAGTTCCCAAGTTCTAGCTAATGATTAAAACTATTGATAAAGAGACGAAGAGCAAACACAATTTTTATGTGGAAACCGGGAGAAAAACCATGGCACAAATCTCTCTTTTATTATTTTCTCATAATAACAAATGATACTAGGAAGAAATAAAAAAAGGAAAAAATATTAGGTCAATTCTTCTCCTAGGCTAAGTCCACTAATCTAACACTCCCTTTAAGTTAGGATGTACATATCAATGAGACCCAACTTGCTAACACAAAAGTCAAAGTTCTGTCTTAAAAGTCCCTTAGCGAGGACATCATCAACTAGTTGGCTTGAAGGAATGTACGGAATGCATATGCTACCACTGTGCAGCCTTTCTTTGATGAAGTGTCGATCAATCTCAACATGTTTAGTTCATGTTGAATTAGATTGTTGCGATGCTAATGGTTGCCTTGTTATCACAAAATAATTTCATATCATACAAAGCTTTATGGAACCAAATTTTCACTCATAGTCCTGTACTTGGTCGCAACACTGCTTCTGGCCATGACCCCTTGCTTCTTACCCTTCCAAATTACAAGATTGCCTCATAAAAGGTACAATAACCGAAGGTAGATTTCCGGTCAACAATTGGCCCTGCCCAATCTGAATCAGTATAAACCCTCAATAGTTTTCATGTTCATCTTTCTGAACAGTAGTCCTTTACCAGGAGTCGTTTTTAAGTGTCTCAGGATTCTGTTTATAGCATCCATGTATTCCTCGTTGGGAGCCTACATGAACACTCACAGTACTCACAACAAAGAAAATATCTGGTTAAGTATGGGCAAGTAAATCAACTTACTCACAAGGCATTAATATTGTTCTTTATTAACTAGAACTTTATCATCTAAATTTTCCAGTTTAAAATTGAATTCAATGGGAGTATCAAGAGGACGATACCCTAGCATACTTGTCTTCATCAGCAAATCAAGGGTATACTTCCTCTAAGATATGGAGATACCTTCTTTAGATCTGGCTACCTCCATTACAAGGAAATATTCATATTTACCAAGTCTTTGATTTCAAACTCATGAATCCTCTTTGAGGCAAATTTCAAAACAAACTTCCATCAGGAAGGGAATTGGTCTTTGGCCTAGTATACGCCCTTGAACTACATCAAACTTAGAATTAAGACCAACAAGAAAGTCATAATTCCTGTTAATCTCTTCAATTCTAGAATATTGCAAACCATCATTGGGACTGCTCCAGACTACTTCTCTGCATAGGTCCATAGGTCCATTCCCGGCCATAAAAGAGAAAGCTTATTAAAAAAGGATGTGACATCCCTGGTTCATTCATGAATCTACTTGCTTAGCGCGTATAAGCAAGAAGCATTCTAACGTTTGGAGTATATTGTCTGGGTTGTGTCCCAAAAATATTTAGCAGTTGCAACGCACAGTAAGGGTTTGTCAATATGTGGTTTCGTACTATTGCTCAATGTGGATCGAAGAAGAGAGTCATCTGCCTTTCAGTACCGTTCTTGTTTTTCCTGTCAGAAAACCAAATTTATGTCAGCGGACCATTTTCAGTGACTGAAACCATGAGAAATAGTTATTGTTAGTCAATTTTTCCCTGAAAAATATCTTATAGACTGTGCCATTGTATTAGTCACATAAGAAAAGGATAAATTGGGGAATGAGGTTATCGAATTCTCATAATACATCAGTATGAAGGCCATGACTAAGAGTGTTGAATGTCACCCCTAAGGTAGCCTCAATTGCTGTAATCTATTATCAAAGCACTTCTAGTTGTTGGTAAGCTATACCCGAAGAAGAAGCGAAAGCTTGAACGTTAGGGTTGGAATGTGCCAAAGACTCGTCGACCTCAAATGTTGGGTGAAATTTGAGGATTCCTAACATCGGGATGATAACTAAGGTCAATAGGTGGTAGGGCATACAGAATTGATTGTAGAAGCGGTGGTGGTCGGTCGAAATTAAGTGGCAGTTCATGGATCGGTACGTGGGGGACACTATAGTCCGCAAATGAAGACAAGGGTGGCACAGGTAGATCAGCTGGCGGTGCCTATATAGGATGGCCTATGTGTGTAACTCCGGCGAAGACTGGTGCGACACAAAAAGTTGCGGAATTAAGTCTAAAGGCGATGGAACCATTCATCCGTGTAGCGATAATACGAGGATCGACGACAGTGCTAATATCGACAATTGTCTCCTTTGTTTGGTTTGGTTTCTATCACGAGTTGTACTATCCAAGGTTTGATCATTATCTCGCTCTGATACCATATTGAAAAAGAGACAAAGAGCTAACACAATTTTTACATGGAGACCCTAGTTCAAGGAGAAAAGTCACGATGCAAATCTCTTCTTTATTATTTTCTCTAATAACAAATGATACAAGGGAAAATGAATAGACTACATTGACAAATAAAAAAAGGAAAAAATATTAGGTCAAATCTTCCCTTGGGTCAAGCCCACTAAATCTAACAAAAACCCACATTTGTATATTCAAAGTTCAGATGTTTGGGCTTTGTACTTGCCTCGAGTGGATAAGCCATTTGAGTCTCCCATCATATAGTTAGAGTTTCCTATTATTATAACCCATCCTTGGCTACAATAGAACTTTTTTTAAAAAAAAAAGCTCTTCATTGTTTACCGTATTTAGTATTTTTCATAATCATCGTCTCTTGATTTGTAATGCAGACTAAAATCATTTGCACTCAAAACACATATATAATAACCGACTTAATATCCCAAACAGCCCTAAATGTTTTTTCAGTACACTTCAGCACACCATAAGATATAAGACTTTGAATCATCGACCTCAACAGAAAGAGTACATATCATTATCGTTGGTCTATGTTGGCCAATGGCCGGTAACTTAGCAAGCGCTATAAGCAGCTATTTGTATAATAAGCAGGTAGGTACTACACATTGGTAGTTGGGGCAAACGACAGAAGGTGGAGAAGGTATCGCGATATGCTTAAAGTGGTTGCTGATTCTTTCAGGGTGTTGGATATCTGAGCTGTTTATGAAGGGTGTAAATCTCACCCAGTTTCTCTATTTAAAATTTTCCCTCTTCATTTAATATCTATTGGAAATTATTGTATATAGTTTGGTAATATATCAATGTCCTTGTAAGATAATATAAACATTTGTTATAAAGAGCTACAAAAGTACCCAAGTTCTATTCGACTTCCCATAGGTGTAATATATTATGTTTATTAGACAAAAACAATAGAATTTCAGCATAAAAGATTGTAGTTTATTTCAAAATTG

mRNA sequence

TTTAAATCCATTCTTAAAAATTGGGACTAAAGAAAAAGACAATTTTCTCCCATTCATTTTATCCAATTGAACGTAAGAAAATTTCCCAAAAGTAAGGAAGAAAGAAAAGAAACAACAGCAGAAAGAGTGTGGAATATGACCACAAAAACCCAACCCAATTAGATATACCATTCTCGGCTTCCATTTTCCAATTTTCCATTTTATGAGAGCTTCTCTTTATCAGATATGGCCGTTTCAACCTCTTGCCTGAGTTGGGTTCCCACCACTGCATCCAATTGGAAGCTGAAGTTGCTTCCTTTCAATGAGCCTACAACAGCTACTTCTTCATTTTCTTCCTCTAGTACCATCAATTGCTCAATTGAGAGAACTTCTCGTGATGAAGGCATTTACAATAGAAGGCCGCTTTTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTGGGTGCGAGTCCCCTCTTTGCTCAAGTCCCAAAGAATTATCGAGCATTTGTAGACTATACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGAATTTGATTTTCGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGACATCCATGAAGAAGGGCCATTAGATGAGGTTGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGTTACCATATATGACATGAAGGAGCGAACGATTGATGGGAAAAATTATTACACCTTTGAGTATAAACTTAGTTCTAGAGCATTCTCCCGCACCGCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTACACATTGGTAGTTGGGGCAAACGACAGAAGGTGGAGAAGGTATCGCGATATGCTTAAAGTGGTTGCTGATTCTTTCAGGGTGTTGGATATCTGAGCTGTTTATGAAGGGTGTAAATCTCACCCAGTTTCTCTATTTAAAATTTTCCCTCTTCATTTAATATCTATTGGAAATTATTGTATATAGTTTGGTAATATATCAATGTCCTTGTAAGATAATATAAACATTTGTTATAAAGAGCTACAAAAGTACCCAAGTTCTATTCGACTTCCCATAGGTGTAATATATTATGTTTATTAGACAAAAACAATAGAATTTCAGCATAAAAGATTGTAGTTTATTTCAAAATTG

Coding sequence (CDS)

ATGGCCGTTTCAACCTCTTGCCTGAGTTGGGTTCCCACCACTGCATCCAATTGGAAGCTGAAGTTGCTTCCTTTCAATGAGCCTACAACAGCTACTTCTTCATTTTCTTCCTCTAGTACCATCAATTGCTCAATTGAGAGAACTTCTCGTGATGAAGGCATTTACAATAGAAGGCCGCTTTTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTGGGTGCGAGTCCCCTCTTTGCTCAAGTCCCAAAGAATTATCGAGCATTTGTAGACTATACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGAATTTGATTTTCGAGCCCATGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGACATCCATGAAGAAGGGCCATTAGATGAGGTTGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGTTACCATATATGACATGAAGGAGCGAACGATTGATGGGAAAAATTATTACACCTTTGAGTATAAACTTAGTTCTAGAGCATTCTCCCGCACCGCCTTTGCAACCATAGCCATTGCAAACGGTAGGTACTACACATTGGTAGTTGGGGCAAACGACAGAAGGTGGAGAAGGTATCGCGATATGCTTAAAGTGGTTGCTGATTCTTTCAGGGTGTTGGATATCTGA

Protein sequence

MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPLLLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTFEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

Homology

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BLAST of Pay0022275 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-66
Identity = 133/236 (56.36%), Postives = 167/236 (70.76%), Query Frame = 0


Query: 2   AVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEG-IYNRRPL 61
           ++S  C  + PT +   K ++L  N    A    SS    + S     +  G  + RR  
Sbjct: 5   SLSIRCGGFSPTISH--KTEILCPNPSLKACCLLSSGGKADSSESTYQKGSGNNWKRRQA 64

Query: 62  LLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 121
           L+GVG L  + + A+ L A ++PK+Y  FVD  DGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 65  LVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRY 124

Query: 122 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 181
           LQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ  TIYDMKER  DGKNYYT
Sbjct: 125 LQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYT 184

Query: 182 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEY L +  ++ T+FAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 185 FEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of Pay0022275 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.7e-32
Identity = 77/201 (38.31%), Postives = 108/201 (53.73%), Query Frame = 0


Query: 34  SFSSSSTINCSIERTSRDEGIYNRRPLLLGVGALATSLLGASPL--FAQVPKNYRAFVDY 93
           S SSSS +    +R         R  +  GV A   SLL  +PL   A+  K + A  D 
Sbjct: 37  SSSSSSHLQDKCQR---------RLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDN 96

Query: 94  TDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLV 153
            D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E GP  ++   L+
Sbjct: 97  KDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLI 156

Query: 154 KHRYAAPNQKVTIYDMKERTIDGKNYYTFEYKLSSRAFSRTAFATIAIANGRYYTLVVGA 213
           K   A PNQK T+ D  E  +DGK YY FE+ + +R ++R A  TI + NG +YTL  GA
Sbjct: 157 KKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGA 216

Query: 214 NDRRWRRYRDMLKVVADSFRV 233
           N+RRW + +D L  V DSF++
Sbjct: 217 NERRWEKMKDRLHTVVDSFKI 228

[Close]

BLAST of Pay0022275 vs. ExPASy Swiss-Prot
Match: O23403 (PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.1e-05
Identity = 54/248 (21.77%), Postives = 99/248 (39.92%), Query Frame = 0


Query: 23  LPFNEPTTATSSFSSSST--------INCSIERTSRDEGIYNRRPLLLG--VGALATSLL 82
           L F+ P ++   + S+ +        INC +    +   +  R+ +++G  +  L  S  
Sbjct: 39  LLFSRPISSGPKYQSAKSAKPESPVAINC-LTDAKQVCAVGRRKSMMMGLLMSGLIVSQA 98

Query: 83  GASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT 142
                FA  P  +R ++D  DGYS+ YP +W +      D  F+D  +  +N+ V+F   
Sbjct: 99  NLPTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSP 158

Query: 143 EKKD---IHEEGPLDEVVNFLVKH--------RYAAPNQKVTIYDMKERTIDGKNYYTFE 202
              +   + + G  +EV   +++         R     Q   +        DGK YY  E
Sbjct: 159 SSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVE 218

Query: 203 YKLSSRA-----------------FSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLK 233
             + S A                 ++R   A + + N R Y++ +   ++ +      L+
Sbjct: 219 VNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLR 278

[Close]

BLAST of Pay0022275 vs. ExPASy TrEMBL
Match: A0A1S3CJF3 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501649 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.2e-130
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120
           LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL
Sbjct: 61  LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

Query: 121 QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF 180
           QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF
Sbjct: 121 QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF 180

Query: 181 EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of Pay0022275 vs. ExPASy TrEMBL
Match: A0A1S3CKZ3 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501649 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.0e-128
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQ-VPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFAQ VPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Pay0022275 vs. ExPASy TrEMBL
Match: A0A0A0KNR7 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505780 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 226/236 (95.76%), Postives = 230/236 (97.46%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVP TASNWKLKLLPFNEP+TATSSFSSSSTINCSIER SRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFA ++PKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDGK YYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKIYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Pay0022275 vs. ExPASy TrEMBL
Match: A0A6J1GN22 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455996 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 210/235 (89.36%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPT+ASNWK +LLPFNEP+TAT S+SS +TI CS ERTSR E   NRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120
           LLGVGALA SL  ASPLFA+VPKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRYL
Sbjct: 61  LLGVGALAASLFAASPLFAEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

Query: 121 QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF 180
           QLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYTF
Sbjct: 121 QLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYTF 180

Query: 181 EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           EYKLSSRA+SRT+FATIA+ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 EYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of Pay0022275 vs. ExPASy TrEMBL
Match: A0A6J1JMZ7 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487305 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.2e-115
Identity = 209/235 (88.94%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPT+ASNWK +LLPFNEP+TAT S+SS +T+ CS ERTSR E   NRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120
           LLGVGALATSL  A PLFA+VPKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRYL
Sbjct: 61  LLGVGALATSLFAARPLFAEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

Query: 121 QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF 180
           QLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDGKNYYTF
Sbjct: 121 QLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGKNYYTF 180

Query: 181 EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           EYKLSSRA+SRT+FATIA+ANGRYYTL+VGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 EYKLSSRAYSRTSFATIAVANGRYYTLIVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of Pay0022275 vs. NCBI nr
Match: XP_008463498.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 473.8 bits (1218), Expect = 8.7e-130
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120
           LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL
Sbjct: 61  LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

Query: 121 QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF 180
           QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF
Sbjct: 121 QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF 180

Query: 181 EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of Pay0022275 vs. NCBI nr
Match: XP_008463496.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 469.2 bits (1206), Expect = 2.1e-128
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQ-VPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFAQ VPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAQEVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Pay0022275 vs. NCBI nr
Match: XP_004149826.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic [Cucumis sativus] >KGN51268.1 hypothetical protein Csa_009408 [Cucumis sativus])

HSP 1 Score: 452.2 bits (1162), Expect = 2.7e-123
Identity = 226/236 (95.76%), Postives = 230/236 (97.46%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSCLSWVP TASNWKLKLLPFNEP+TATSSFSSSSTINCSIER SRDEGIYNRRPL
Sbjct: 1   MAVSTSCLSWVPATASNWKLKLLPFNEPSTATSSFSSSSTINCSIERISRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLLGASPLFA ++PKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLGASPLFAEEIPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQK TIYDMKERTIDGK YYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKTTIYDMKERTIDGKIYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Pay0022275 vs. NCBI nr
Match: XP_038889545.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 443.0 bits (1138), Expect = 1.6e-120
Identity = 219/235 (93.19%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSC SWVPTTASNWKL+LLPFNEP+TATSSFSS STINCS E+TSR+EG  NRRPL
Sbjct: 1   MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60

Query: 61  LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120
           LLGVGALATSLL ASPLFA+VPKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRYL
Sbjct: 61  LLGVGALATSLLAASPLFAEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

Query: 121 QLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYTF 180
           QLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYTF
Sbjct: 121 QLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYTF 180

Query: 181 EYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           EYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 EYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 235

[Close]

BLAST of Pay0022275 vs. NCBI nr
Match: XP_038889544.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 438.3 bits (1126), Expect = 4.1e-119
Identity = 219/236 (92.80%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60
           MAVSTSC SWVPTTASNWKL+LLPFNEP+TATSSFSS STINCS E+TSR+EG  NRRPL
Sbjct: 1   MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60

Query: 61  LLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 120
           LLGVGALATSLL ASPLFA +VPKNYRAFVD TDGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 61  LLGVGALATSLLAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

Query: 121 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 180
           LQLQNVRVKFIPTEKKDIHEEG LDEVVNFLVKHRYAAPNQK TIYDMKERTIDG+NYYT
Sbjct: 121 LQLQNVRVKFIPTEKKDIHEEGSLDEVVNFLVKHRYAAPNQKATIYDMKERTIDGRNYYT 180

Query: 181 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEYKLSSRAFSRT+FATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI
Sbjct: 181 FEYKLSSRAFSRTSFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236

[Close]

BLAST of Pay0022275 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 255.8 bits (652), Expect = 3.5e-68
Identity = 121/182 (66.48%), Postives = 147/182 (80.77%), Query Frame = 0


Query: 55  YNRRPLLLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDS 114
           + RR  L+GVG L  + + A+ L A ++PK+Y  FVD  DGYSYYYPSDWREFDFRAHDS
Sbjct: 49  WKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 108

Query: 115 AFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTID 174
           AFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ  TIYDMKER  D
Sbjct: 109 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 168

Query: 175 GKNYYTFEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVL 234
           GKNYYTFEY L +  ++ T+FAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L
Sbjct: 169 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 228

Query: 235 DI 236
            I
Sbjct: 229 QI 230

[Close]

BLAST of Pay0022275 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 254.6 bits (649), Expect = 7.7e-68
Identity = 133/236 (56.36%), Postives = 167/236 (70.76%), Query Frame = 0


Query: 2   AVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEG-IYNRRPL 61
           ++S  C  + PT +   K ++L  N    A    SS    + S     +  G  + RR  
Sbjct: 5   SLSIRCGGFSPTISH--KTEILCPNPSLKACCLLSSGGKADSSESTYQKGSGNNWKRRQA 64

Query: 62  LLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRY 121
           L+GVG L  + + A+ L A ++PK+Y  FVD  DGYSYYYPSDWREFDFRAHDSAFKDRY
Sbjct: 65  LVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRY 124

Query: 122 LQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKERTIDGKNYYT 181
           LQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ  TIYDMKER  DGKNYYT
Sbjct: 125 LQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYT 184

Query: 182 FEYKLSSRAFSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 236
           FEY L +  ++ T+FAT+A+ N RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 185 FEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of Pay0022275 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 )

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-42
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 55  YNRRPLLLGVGALATSLLGASPLFA-QVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDS 114
           + RR  L+GVG L  + + A+ L A ++PK+Y  FVD  DGYSYYYPSDWREFDFRAHDS
Sbjct: 49  WKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 108

Query: 115 AFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLVKHRYAAPNQKVTIYDMKE 170
           AFKDRYLQLQNVRV+FIPTEK DIHE GP++EVV  LVKH++AAPNQ  TIYDMKE
Sbjct: 109 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 164

[Close]

BLAST of Pay0022275 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 139.0 bits (349), Expect = 4.7e-33
Identity = 77/201 (38.31%), Postives = 108/201 (53.73%), Query Frame = 0


Query: 34  SFSSSSTINCSIERTSRDEGIYNRRPLLLGVGALATSLLGASPL--FAQVPKNYRAFVDY 93
           S SSSS +    +R         R  +  GV A   SLL  +PL   A+  K + A  D 
Sbjct: 37  SSSSSSHLQDKCQR---------RLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDN 96

Query: 94  TDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPTEKKDIHEEGPLDEVVNFLV 153
            D Y++ YP  W+E      D  +KD    L++V V  +PT K+ I E GP  ++   L+
Sbjct: 97  KDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLI 156

Query: 154 KHRYAAPNQKVTIYDMKERTIDGKNYYTFEYKLSSRAFSRTAFATIAIANGRYYTLVVGA 213
           K   A PNQK T+ D  E  +DGK YY FE+ + +R ++R A  TI + NG +YTL  GA
Sbjct: 157 KKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGA 216

Query: 214 NDRRWRRYRDMLKVVADSFRV 233
           N+RRW + +D L  V DSF++
Sbjct: 217 NERRWEKMKDRLHTVVDSFKI 228

[Close]

BLAST of Pay0022275 vs. TAIR 10
Match: AT4G15510.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 48.9 bits (115), Expect = 6.5e-06
Identity = 54/248 (21.77%), Postives = 99/248 (39.92%), Query Frame = 0


Query: 23  LPFNEPTTATSSFSSSST--------INCSIERTSRDEGIYNRRPLLLG--VGALATSLL 82
           L F+ P ++   + S+ +        INC +    +   +  R+ +++G  +  L  S  
Sbjct: 39  LLFSRPISSGPKYQSAKSAKPESPVAINC-LTDAKQVCAVGRRKSMMMGLLMSGLIVSQA 98

Query: 83  GASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVKFIPT 142
                FA  P  +R ++D  DGYS+ YP +W +      D  F+D  +  +N+ V+F   
Sbjct: 99  NLPTAFASTPV-FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSP 158

Query: 143 EKKD---IHEEGPLDEVVNFLVKH--------RYAAPNQKVTIYDMKERTIDGKNYYTFE 202
              +   + + G  +EV   +++         R     Q   +        DGK YY  E
Sbjct: 159 SSSNYTSLEDLGSPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVE 218

Query: 203 YKLSSRA-----------------FSRTAFATIAIANGRYYTLVVGANDRRWRRYRDMLK 233
             + S A                 ++R   A + + N R Y++ +   ++ +      L+
Sbjct: 219 VNIKSYANNNELAVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLR 278

The following BLAST results are available for this feature:

BLAST of Pay0022275 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80634	1.1e-66	56.36	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]
P82538	6.7e-32	38.31	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]
O23403	9.1e-05	21.77	PsbP domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Pay0022275 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJF3	4.2e-130	100.00	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]
A0A1S3CKZ3	1.0e-128	99.58	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu...	[more]
A0A0A0KNR7	1.3e-123	95.76	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505780 PE=4 S...	[more]
A0A6J1GN22	1.7e-115	89.36	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]
A0A6J1JMZ7	2.2e-115	88.94	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]

BLAST of Pay0022275 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463498.1	8.7e-130	100.00	PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isofo...	[more]
XP_008463496.1	2.1e-128	99.58	PREDICTED: photosynthetic NDH subunit of lumenal location 1, chloroplastic isofo...	[more]
XP_004149826.1	2.7e-123	95.76	photosynthetic NDH subunit of lumenal location 1, chloroplastic [Cucumis sativus...	[more]
XP_038889545.1	1.6e-120	93.19	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Beni...	[more]
XP_038889544.1	4.1e-119	92.80	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Beni...	[more]

BLAST of Pay0022275 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39470.2	3.5e-68	66.48	PsbP-like protein 2	[more]
AT2G39470.1	7.7e-68	56.36	PsbP-like protein 2	[more]
AT2G39470.3	1.5e-42	70.69	PsbP-like protein 2	[more]
AT3G55330.1	4.7e-33	38.31	PsbP-like protein 1	[more]
AT4G15510.1	6.5e-06	21.77	Photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 84..232 e-value: 4.3E-39 score: 134.1
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 72..232 e-value: 3.4E-38 score: 133.3
None	No IPR available	PANTHER	PTHR31407:SF10	PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 1, CHLOROPLASTIC	coord: 1..235
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 1..235
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 86..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0022275.1	Pay0022275.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding