Pay0022157 (gene) Melon (Payzawat) v1

Overview
NamePay0022157
Typegene
OrganismCucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Descriptionglycine-rich protein 5-like
Locationchr12: 23914661 .. 23915243 (+)
RNA-Seq ExpressionPay0022157
SyntenyPay0022157
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTTTGGCTTTCAAATATCTCTGGCTGGTGGTTCTATGTGCACTAATTTGTGCCTCAGAGCCCAGAAGACTTGTAATTACAAATGGGGGAGAGATTGAGAGTGAAAAGACATTGCCTTTCCAGTTCTTTCCTGGATACGGAGGCGGGCTCGGTGGAGGCGGAGGGTTTGGTGGTGGCGGGGGTGGTGGGTTAGGTGGTGGTTCGGGCTTCGGCAGTGGAGGTGGAGGGGGTTTCGGATCTGGCATTGGAGGTCTAGGGAGTGGCGGGGGCGGGGGGTTTGGCGGTGGTGGTGGTGGCGGCATTTTAGGTGGCGGAGCTGGCGGAGGAGGTGGTGGTGGATTTGGAGGTGGACTGCCTTGAGTTCAAAATTGCGTTTGTTTCAATCAGACGTTACTTTACTATATATTTGAGGGCTTTGTTAAATAATTACTATATATAGATTTGGTTAATTATAATGTTATTAATTGTATGTTAGAAGATGTTTGTTTTGTTGTGTGTCTTTACATTTATGTGATTTCATGTTATAAAGTTTAATGAATATGGTTTTTACTATGAAGTATACCAATGAACAATAACC

mRNA sequence

ATGGGTTCTTTGGCTTTCAAATATCTCTGGCTGGTGGTTCTATGTGCACTAATTTGTGCCTCAGAGCCCAGAAGACTTGTAATTACAAATGGGGGAGAGATTGAGAGTGAAAAGACATTGCCTTTCCAGTTCTTTCCTGGATACGGAGGCGGGCTCGGTGGAGGCGGAGGGTTTGGTGGTGGCGGGGGTGGTGGGTTAGGTGGTGGTTCGGGCTTCGGCAGTGGAGGTGGAGGGGGTTTCGGATCTGGCATTGGAGGTCTAGGGAGTGGCGGGGGCGGGGGGTTTGGCGGTGGTGGTGGTGGCGGCATTTTAGGTGGCGGAGCTGGCGGAGGAGGTGGTGGTGGATTTGGAGGTGGACTGCCTTGAGTTCAAAATTGCGTTTGTTTCAATCAGACGTTACTTTACTATATATTTGAGGGCTTTGTTAAATAATTACTATATATAGATTTGGTTAATTATAATGTTATTAATTGTATGTTAGAAGATGTTTGTTTTGTTGTGTGTCTTTACATTTATGTGATTTCATGTTATAAAGTTTAATGAATATGGTTTTTACTATGAAGTATACCAATGAACAATAACC

Coding sequence (CDS)

ATGGGTTCTTTGGCTTTCAAATATCTCTGGCTGGTGGTTCTATGTGCACTAATTTGTGCCTCAGAGCCCAGAAGACTTGTAATTACAAATGGGGGAGAGATTGAGAGTGAAAAGACATTGCCTTTCCAGTTCTTTCCTGGATACGGAGGCGGGCTCGGTGGAGGCGGAGGGTTTGGTGGTGGCGGGGGTGGTGGGTTAGGTGGTGGTTCGGGCTTCGGCAGTGGAGGTGGAGGGGGTTTCGGATCTGGCATTGGAGGTCTAGGGAGTGGCGGGGGCGGGGGGTTTGGCGGTGGTGGTGGTGGCGGCATTTTAGGTGGCGGAGCTGGCGGAGGAGGTGGTGGTGGATTTGGAGGTGGACTGCCTTGA

Protein sequence

MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGLP
Homology
[Close]
BLAST of Pay0022157 vs. ExPASy TrEMBL
Match: A0A5D3BMG3 (Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005650 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]
BLAST of Pay0022157 vs. ExPASy TrEMBL
Match: E5GC63 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]
BLAST of Pay0022157 vs. ExPASy TrEMBL
Match: A0A1S3BEW4 (glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC103489125 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]
BLAST of Pay0022157 vs. ExPASy TrEMBL
Match: A0A0A0LS00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.3e-34
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGS AFKYLWLVVLCALI ASEPR+LVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]
BLAST of Pay0022157 vs. ExPASy TrEMBL
Match: A0A6J1CF04 (glycine-rich protein 5-like OS=Momordica charantia OX=3673 GN=LOC111010881 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 

Query: 3   SLAFKYLWLVVLCALICASEPRRLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGF 62
           +LA K LWLV+L ALICASEPR+ ++ NGG+I    E+EKTLPFQFFPG+GGGLGGGGGF
Sbjct: 5   ALASKVLWLVLLGALICASEPRK-IVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 64

Query: 63  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGG 122
           GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGG
Sbjct: 65  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGG 124

[Close]
BLAST of Pay0022157 vs. NCBI nr
Match: XP_008446362.1 (PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0056845.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa] >TYJ99348.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.6e-37
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]
BLAST of Pay0022157 vs. NCBI nr
Match: XP_011648421.1 (glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothetical protein Csa_013856 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 2.7e-34
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGS AFKYLWLVVLCALI ASEPR+LVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG
Sbjct: 1   MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGGGL
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]
BLAST of Pay0022157 vs. NCBI nr
Match: XP_038895952.1 (glycine-rich cell wall structural protein-like [Benincasa hispida])

HSP 1 Score: 145.6 bits (366), Expect = 2.8e-31
Identity = 114/123 (92.68%), Postives = 118/123 (95.93%), Query Frame = 0 

Query: 1   MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
           MGSLAFK+LWLVVLCALI ASEPR+LVITNGGEIESEKTL FQFFPG+GGGLGGGGG+GG
Sbjct: 1   MGSLAFKFLWLVVLCALIWASEPRKLVITNGGEIESEKTLAFQFFPGFGGGLGGGGGYGG 60

Query: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGF--GGGGGGGILGGGAGGGGGGGFGG 120
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGF  GGGGGGGILGGGAGGG GGGFGG
Sbjct: 61  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGGGILGGGAGGGAGGGFGG 120

Query: 121 GLP 122
           GLP
Sbjct: 121 GLP 123

[Close]
BLAST of Pay0022157 vs. NCBI nr
Match: XP_022140151.1 (glycine-rich protein 5-like [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-25
Identity = 105/123 (85.37%), Postives = 113/123 (91.87%), Query Frame = 0 

Query: 3   SLAFKYLWLVVLCALICASEPRRLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGF 62
           +LA K LWLV+L ALICASEPR+ ++ NGG+I    E+EKTLPFQFFPG+GGGLGGGGGF
Sbjct: 5   ALASKVLWLVLLGALICASEPRK-IVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 64

Query: 63  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGG 122
           GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGG
Sbjct: 65  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGG 124

[Close]
BLAST of Pay0022157 vs. NCBI nr
Match: XP_022994117.1 (glycine-rich protein 5 [Cucurbita maxima])

HSP 1 Score: 114.4 bits (285), Expect = 6.9e-22
Identity = 105/124 (84.68%), Postives = 108/124 (87.10%), Query Frame = 0 

Query: 1   MGS-LAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFG 60
           MGS LA K+LWL+VL ALICASEPRRLV T GG   SEKT  FQFFPGYGGGLGGGGGFG
Sbjct: 1   MGSFLALKFLWLLVLFALICASEPRRLVGTGGG-FGSEKTGYFQFFPGYGGGLGGGGGFG 60

Query: 61  GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGG--GGGILGGGAGGGGGGGFG 120
           GGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGGGG  G G+LGGGAGGG GGGFG
Sbjct: 61  GGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGGSGSGVLGGGAGGGAGGGFG 120

Query: 121 GGLP 122
           GGLP
Sbjct: 121 GGLP 123

The following BLAST results are available for this feature:
BLAST of Pay0022157 vs.
Match NameE-valueIdentityDescription
BLAST of Pay0022157 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BMG31.3e-37100.00Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695... [more]
E5GC631.3e-37100.00Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A1S3BEW41.3e-37100.00glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC10348912... [more]
A0A0A0LS001.3e-3496.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1[more]
A0A6J1CF041.1e-2585.37glycine-rich protein 5-like OS=Momordica charantia OX=3673 GN=LOC111010881 PE=4 ... [more]
BLAST of Pay0022157 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008446362.12.6e-37100.00PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 ... [more]
XP_011648421.12.7e-3496.69glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothet... [more]
XP_038895952.12.8e-3192.68glycine-rich cell wall structural protein-like [Benincasa hispida][more]
XP_022140151.12.3e-2585.37glycine-rich protein 5-like [Momordica charantia][more]
XP_022994117.16.9e-2284.68glycine-rich protein 5 [Cucurbita maxima][more]
BLAST of Pay0022157 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Pay0022157.1Pay0022157.1mRNA