Pay0022144 (gene) Melon (Payzawat) v1

Overview


Name	Pay0022144
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr03: 18922641 .. 18923083 (+)
RNA-Seq Expression	Pay0022144
Synteny	Pay0022144

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAACATTCACAATTGAACTCGTTTGTCATCTTATTACTTCTTGATCTCTACACCATGGGAGGCAACCACAGGCAAAAAAAGACTCATTCTTCCTTCTCCATCTTTAGTTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTCTATGAGCATGGTACCAATTGTGAGGATGTGGCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGTATTGATAGAAAAGCCAAAGATTACATTGACAGGATTTATAGAAATCGTATCTTTGAAACAGAGCGTCAAACTGTCACTCTTCATCCCAATGGACCAAATTCCAATGTGTAGAAGTTTTATTTGTTTTCTTTCTTTCTTCTTTGTTTTTTTTTTTTTTTTTCCTTCAACAATTAAATTATTGTAATTTGCTTCTAGCTCAG

mRNA sequence

CCCAAACATTCACAATTGAACTCGTTTGTCATCTTATTACTTCTTGATCTCTACACCATGGGAGGCAACCACAGGCAAAAAAAGACTCATTCTTCCTTCTCCATCTTTAGTTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTCTATGAGCATGGTACCAATTGTGAGGATGTGGCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGTATTGATAGAAAAGCCAAAGATTACATTGACAGGATTTATAGAAATCGTATCTTTGAAACAGAGCGTCAAACTGTCACTCTTCATCCCAATGGACCAAATTCCAATGTGTAGAAGTTTTATTTGTTTTCTTTCTTTCTTCTTTGTTTTTTTTTTTTTTTTTCCTTCAACAATTAAATTATTGTAATTTGCTTCTAGCTCAG

Coding sequence (CDS)

ATGGGAGGCAACCACAGGCAAAAAAAGACTCATTCTTCCTTCTCCATCTTTAGTTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTCTATGAGCATGGTACCAATTGTGAGGATGTGGCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGTATTGATAGAAAAGCCAAAGATTACATTGACAGGATTTATAGAAATCGTATCTTTGAAACAGAGCGTCAAACTGTCACTCTTCATCCCAATGGACCAAATTCCAATGTGTAG

Protein sequence

MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNCEDVASSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV

Homology

[Close]

BLAST of Pay0022144 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-47
Identity = 92/98 (93.88%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNCEDVASSSKVWPSDEDKGYRWVAE 60
          MGG+HRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTN EDV SSSKVWPSDEDKGYRWVAE
Sbjct: 1  MGGSHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          PGIDRKAKDYIDRIY+NR+FETERQTVT+HPNGPNSNV
Sbjct: 61 PGIDRKAKDYIDRIYKNRVFETERQTVTIHPNGPNSNV 98

[Close]

BLAST of Pay0022144 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.2e-35
Identity = 73/99 (73.74%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNC-EDVASSSKVWPSDEDKGYRWVA 60
          MGGN+RQKK+HSSFSIFSFFKS+RGRKGD   H  +C +++  S KVWPSDEDK + WVA
Sbjct: 1  MGGNNRQKKSHSSFSIFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          EPGIDRKAKDYIDRIYRNR+FE+ERQT+T+ PNG  SNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTITISPNGTKSNV 99

[Close]

BLAST of Pay0022144 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-34
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNC-EDVASSSKVWPSDEDKGYRWVA 60
          MGGN+RQKK H+SFSIFSFFKS+RGRKGD   H  +C +++  S KVWPSDEDK + WVA
Sbjct: 1  MGGNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          EPGIDRKAKDYIDRIYRNR+FE+ERQTVT+ PNG  SNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99

[Close]

BLAST of Pay0022144 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-34
Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNCED-VASSSKVWPSDEDKGYRWVA 60
          MGGN RQKK+HSSFSIFSFFKSKRGRKGD Y+HG    D +  S+KVWPSDEDK + W+A
Sbjct: 1  MGGN-RQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIA 60

Query: 61 EPGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          EPGIDRKAKDYIDRIYRNR+FE+ERQTVT+ PNG  SNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

[Close]

BLAST of Pay0022144 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.0e-34
Identity = 75/99 (75.76%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEH-GTNCEDVASSSKVWPSDEDKGYRWVA 60
          MGGN RQKK+HSSFSIFSFFKS+RGRKGD Y+H G   +++  S+KVWPSDEDK + WVA
Sbjct: 1  MGGN-RQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          EPGIDRKAKDYIDRIYRNR+FE+ERQTVT+ PNG  SNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

[Close]

BLAST of Pay0022144 vs. NCBI nr
Match: KGN45873.1 (hypothetical protein Csa_005148 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 2.9e-47
Identity = 92/98 (93.88%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNCEDVASSSKVWPSDEDKGYRWVAE 60
          MGG+HRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTN EDV SSSKVWPSDEDKGYRWVAE
Sbjct: 1  MGGSHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          PGIDRKAKDYIDRIY+NR+FETERQTVT+HPNGPNSNV
Sbjct: 61 PGIDRKAKDYIDRIYKNRVFETERQTVTIHPNGPNSNV 98

[Close]

BLAST of Pay0022144 vs. NCBI nr
Match: KAA0035003.1 (hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343.1 hypothetical protein E5676_scaffold155G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 1.3e-34
Identity = 73/99 (73.74%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNC-EDVASSSKVWPSDEDKGYRWVA 60
          MGGN+RQKK+HSSFSIFSFFKS+RGRKGD   H  +C +++  S KVWPSDEDK + WVA
Sbjct: 1  MGGNNRQKKSHSSFSIFSFFKSRRGRKGDNCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          EPGIDRKAKDYIDRIYRNR+FE+ERQT+T+ PNG  SNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTITISPNGTKSNV 99

[Close]

BLAST of Pay0022144 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 4.9e-34
Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNCED-VASSSKVWPSDEDKGYRWVA 60
          MGGN RQKK+HSSFSIFSFFKSKRGRKGD Y+HG    D +  S+KVWPSDEDK + W+A
Sbjct: 1  MGGN-RQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIA 60

Query: 61 EPGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          EPGIDRKAKDYIDRIYRNR+FE+ERQTVT+ PNG  SNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGTKSNV 98

[Close]

BLAST of Pay0022144 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 4.9e-34
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNC-EDVASSSKVWPSDEDKGYRWVA 60
          MGGN+RQKK H+SFSIFSFFKS+RGRKGD   H  +C +++  S KVWPSDEDK + WVA
Sbjct: 1  MGGNNRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVA 60

Query: 61 EPGIDRKAKDYIDRIYRNRIFETERQTVTLHPNGPNSNV 99
          EPGIDRKAKDYIDRIYRNR+FE+ERQTVT+ PNG  SNV
Sbjct: 61 EPGIDRKAKDYIDRIYRNRVFESERQTVTISPNGIKSNV 99

[Close]

BLAST of Pay0022144 vs. NCBI nr
Match: KAG6592311.1 (hypothetical protein SDJN03_14657, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.2 bits (365), Expect = 3.0e-31
Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1  MGGNHRQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNCEDVASSSKVWPSDEDKGYRWVAE 60
          MGGN+R KK+HSSFSIF+FFK ++GRK D Y+HG    ++  S KVWPSDEDK +RWVAE
Sbjct: 1  MGGNNRSKKSHSSFSIFNFFKFRKGRKEDHYDHGGYWNEMPRSGKVWPSDEDKTHRWVAE 60

Query: 61 PGIDRKAKDYIDRIYRNRIFETERQTVTLHPNG 94
          PGIDRKAKDYID+IYRNRIFE+ERQTVTL  NG
Sbjct: 61 PGIDRKAKDYIDKIYRNRIFESERQTVTLPANG 93

[Close]

BLAST of Pay0022144 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 8.6e-13
Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 1  MGGNHRQKKTHSS--FSIFSFFKSKRGRKGDVYEHGTNCEDVASSSKVWPSDEDKGYRWV 60
          MGG +R   +HSS  FS+FSFFK++R  +    E   + +D   + K   SDEDK Y WV
Sbjct: 1  MGGKNR---SHSSKRFSLFSFFKTRRSHR---VEADGSWDDFGYTRKAMASDEDKRY-WV 60

Query: 61 AEPGIDRKAKDYIDRIYRNRIFETERQTVT 89
          AEPGIDRKA  +I + +  R+ E+ERQT++
Sbjct: 61 AEPGIDRKASAFIAKFHATRVSESERQTLS 83

[Close]

BLAST of Pay0022144 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 8.9e-10
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 32 EHGTNCEDVASSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYRNRIFETERQTV 88
          E   + +DV  + K W SDEDK Y WVAEPGIDRKA  +I + + +R+ E+ERQT+
Sbjct: 12 EADASWDDVIYTRKAWASDEDKRY-WVAEPGIDRKASAFIAKFHASRVSESERQTL 66

The following BLAST results are available for this feature:

BLAST of Pay0022144 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0022144 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8W0	1.4e-47	93.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1	[more]
A0A5A7SWT9	6.2e-35	73.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KAK6	2.4e-34	73.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1	[more]
A0A0A0K7Y2	2.4e-34	76.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1	[more]
A0A0A0KBW1	4.0e-34	75.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1	[more]

BLAST of Pay0022144 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45873.1	2.9e-47	93.88	hypothetical protein Csa_005148 [Cucumis sativus]	[more]
KAA0035003.1	1.3e-34	73.74	hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343...	[more]
KGN45870.1	4.9e-34	76.77	hypothetical protein Csa_004960 [Cucumis sativus]	[more]
KGN45869.1	4.9e-34	73.74	hypothetical protein Csa_005516 [Cucumis sativus]	[more]
KAG6592311.1	3.0e-31	73.12	hypothetical protein SDJN03_14657, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0022144 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05858.1	8.6e-13	46.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G26620.1	8.9e-10	51.79	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33511	OS06G0632400 PROTEIN	coord: 1..88
None	No IPR available	PANTHER	PTHR33511:SF17	RIBOSOMAL PROTEIN S12	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0022144.1	Pay0022144.1	mRNA