Pay0022130 (gene) Melon (Payzawat) v1

Overview


Name	Pay0022130
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	DDE Tnp4 domain-containing protein
Location	chr12: 26026158 .. 26027532 (-)
RNA-Seq Expression	Pay0022130
Synteny	Pay0022130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTACGATAAACTCACAATCTTTAGCTCTTACAATGGTTACCTTATCGAAAAATCTCCAAACTCAATTGTTTTGTTTTAAAGATTTCTTTGTTCTTCTCGAAGTTGGAATATTACCTCATTTTCGGTAGTTTTTACAGTTGAATTAAAAATCTCAAAAGATGTTTGAACGAAATTATTTAGCCATATAAAATTCATTCTTTTGAATCATATGGATATAAATTATACTAATAAATGTATAGTTTATTATCACATTATCACCAATTATACATATTATATTCAATACATTAATGTTTTCTTTTCCAAAAATGAGGACAAAACTGAGAATAATAAAAAGGAAGGGTAAGAAGAAAAAAAGGCTGCACTAACAATCATTTCAAAATCCCCATTTCAATTTTTCACCTCTTTCTCTCTCCTCTATTTCCAAATCCTTCAATTCTCTCTCTCATCATCATCATCTTCTTCTTCTTCCTCTGTTTTTATTTCTCATTCGAATTTCATTCTCAGCTTCTCTATACAGAGAGAGCGAAAAGAGATGTTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCTTCTCCCACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGGTGTGCCCCACCGTCCCTTTTCTCCCATTTTCACATTCTTTACTCTGTTTTTCATTTTGGGAAAATTCACATCTTTTTTGCAGTCTACGGGTTCGTTCTTCCATGACCGGAGCACGAGCTTAGGGACTCTAATGGGGGTCAGCTTCCCGGCGATTACTTTCCGAGTCCCTTCCCAGAACAGAGATCAACACACCGCCGCGACGGTCACCGCAGGCGGAGGTTCTCGTAAGAGTAAGAAGACAAAGAGGAAAACGACGACAGCGCCGGCACTGGTTGCAGATCGGAAACGAAGGTGGTGGAGACTATGTAGGGATGACGGCGTCAAGCCGGCGTCTTTGGGCGAGTTTCTCGAAGTGGAACGAAGATTTGGGGATGGTGCCTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTACGGCAGATCAACAGAGGAATGGTCGTTCTTTATTCGCCGATGGAAGAGTTCTTCCACCGGCGCAAACGGAGGAAGACACGTCAGCGACCGGCGCTTTATGCCGATTTTCCGTATCGCTAACCGGAATTTGCAGCGGCGGTGCCGGCTAAAATGTGGGATTTGATTTGTTAATTATATTTTAAATATTACATTATATTTAATTAATCAAATGCTTTTAATTAATGTGGAAGAAAAAAAAGAAGAAAAAAAATGTCACCTTTATTGTGTAGGTGACCCCTCTTTTTCTTTTTCTTTATTTTTTCCTTTTAATTTCCTTTAATCATCTCACAGGTTACATC

mRNA sequence

TTTATTACGATAAACTCACAATCTTTAGCTCTTACAATGGTTACCTTATCGAAAAATCTCCAAACTCAATTGTTTTGTTTTAAAGATTTCTTTGTTCTTCTCGAAGTTGGAATATTACCTCATTTTCGGTAGTTTTTACAGTTGAATTAAAAATCTCAAAAGATGTTTGAACGAAATTATTTAGCCATATAAAATTCATTCTTTTGAATCATATGGATATAAATTATACTAATAAATGTATAGTTTATTATCACATTATCACCAATTATACATATTATATTCAATACATTAATGTTTTCTTTTCCAAAAATGAGGACAAAACTGAGAATAATAAAAAGGAAGGGTAAGAAGAAAAAAAGGCTGCACTAACAATCATTTCAAAATCCCCATTTCAATTTTTCACCTCTTTCTCTCTCCTCTATTTCCAAATCCTTCAATTCTCTCTCTCATCATCATCATCTTCTTCTTCTTCCTCTGTTTTTATTTCTCATTCGAATTTCATTCTCAGCTTCTCTATACAGAGAGAGCGAAAAGAGATGTTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCTTCTCCCACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGTCTACGGGTTCGTTCTTCCATGACCGGAGCACGAGCTTAGGGACTCTAATGGGGGTCAGCTTCCCGGCGATTACTTTCCGAGTCCCTTCCCAGAACAGAGATCAACACACCGCCGCGACGGTCACCGCAGGCGGAGGTTCTCGTAAGAGTAAGAAGACAAAGAGGAAAACGACGACAGCGCCGGCACTGGTTGCAGATCGGAAACGAAGGTGGTGGAGACTATGTAGGGATGACGGCGTCAAGCCGGCGTCTTTGGGCGAGTTTCTCGAAGTGGAACGAAGATTTGGGGATGGTGCCTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTACGGCAGATCAACAGAGGAATGGTCGTTCTTTATTCGCCGATGGAAGAGTTCTTCCACCGGCGCAAACGGAGGAAGACACGTCAGCGACCGGCGCTTTATGCCGATTTTCCGTATCGCTAACCGGAATTTGCAGCGGCGGTGCCGGCTAAAATGTGGGATTTGATTTGTTAATTATATTTTAAATATTACATTATATTTAATTAATCAAATGCTTTTAATTAATGTGGAAGAAAAAAAAGAAGAAAAAAAATGTCACCTTTATTGTGTAGGTGACCCCTCTTTTTCTTTTTCTTTATTTTTTCCTTTTAATTTCCTTTAATCATCTCACAGGTTACATC

Coding sequence (CDS)

ATGTTGAATCCGGCCAACGATCTGTTACCGCCGCCGTCTTCTCCCACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGTCTACGGGTTCGTTCTTCCATGACCGGAGCACGAGCTTAGGGACTCTAATGGGGGTCAGCTTCCCGGCGATTACTTTCCGAGTCCCTTCCCAGAACAGAGATCAACACACCGCCGCGACGGTCACCGCAGGCGGAGGTTCTCGTAAGAGTAAGAAGACAAAGAGGAAAACGACGACAGCGCCGGCACTGGTTGCAGATCGGAAACGAAGGTGGTGGAGACTATGTAGGGATGACGGCGTCAAGCCGGCGTCTTTGGGCGAGTTTCTCGAAGTGGAACGAAGATTTGGGGATGGTGCCTTCTACGGCAACGCGGTGGATCTGGAAGGCGTGGTTACGGCAGATCAACAGAGGAATGGTCGTTCTTTATTCGCCGATGGAAGAGTTCTTCCACCGGCGCAAACGGAGGAAGACACGTCAGCGACCGGCGCTTTATGCCGATTTTCCGTATCGCTAACCGGAATTTGCAGCGGCGGTGCCGGCTAA

Protein sequence

MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLTGICSGGAG

Homology

[Close]

BLAST of Pay0022130 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.5e-38
Identity = 105/205 (51.22%), Postives = 126/205 (61.46%), Query Frame = 0


Query: 12  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHTAA 71
           PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+       A 
Sbjct: 7   PSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 66

Query: 72  TVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASL 131
           +  +   +R++ + KR  + +      R+R+WWR CRDD       G+       K +SL
Sbjct: 67  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 126

Query: 132 GEFLEVERRFGDGAFYGNA-VDLEGVVTA---DQQ--RNGRSLFADGRVLPPAQTE---- 189
           GE+LEVERRFGD A Y +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    
Sbjct: 127 GEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTG 186

[Close]

BLAST of Pay0022130 vs. ExPASy TrEMBL
Match: A0A1S4DUB1 (uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT
Sbjct: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 181 GICSGGAG 188

[Close]

BLAST of Pay0022130 vs. ExPASy TrEMBL
Match: A0A5D3BLI7 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002420 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 486 MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 545

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 546 RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 605

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT
Sbjct: 606 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 665

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 666 GICSGGAG 673

[Close]

BLAST of Pay0022130 vs. ExPASy TrEMBL
Match: A0A1S3CPP8 (uncharacterized protein At3g17950 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 13  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 72

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 73  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 132

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT
Sbjct: 133 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 192

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 193 GICSGGAG 200

[Close]

BLAST of Pay0022130 vs. ExPASy TrEMBL
Match: A0A0A0LQI1 (DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042870 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 182/188 (96.81%), Postives = 182/188 (96.81%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 330 MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 389

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAATVTAGGGSRKSKKTKRKTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 390 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 449

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVV ADQQRNGRSLFADGRVLPPAQTEEDTS    LCRFSVSLT
Sbjct: 450 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLT 509

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 510 GICSGGAG 517

[Close]

BLAST of Pay0022130 vs. ExPASy TrEMBL
Match: A0A6J1E8Y2 (uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94
Identity = 180/188 (95.74%), Postives = 182/188 (96.81%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQH AAT  AGGGSRKSKK KRKTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 61  RDQHAAATAAAGGGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAF+GNAVDLEGVV+ADQQRNGRSLFADGRVLPPAQTEEDTSA GALCRFSVSLT
Sbjct: 121 RRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRFSVSLT 180

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 181 GICSGGAG 188

[Close]

BLAST of Pay0022130 vs. NCBI nr
Match: XP_016899568.1 (PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo] >XP_016899571.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 2.4e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT
Sbjct: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 181 GICSGGAG 188

[Close]

BLAST of Pay0022130 vs. NCBI nr
Match: XP_008465627.2 (PREDICTED: uncharacterized protein At3g17950 isoform X1 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 2.4e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 13  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 72

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 73  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 132

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT
Sbjct: 133 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 192

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 193 GICSGGAG 200

[Close]

BLAST of Pay0022130 vs. NCBI nr
Match: TYJ99038.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 369.0 bits (946), Expect = 2.4e-98
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 486 MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 545

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 546 RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 605

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT
Sbjct: 606 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 665

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 666 GICSGGAG 673

[Close]

BLAST of Pay0022130 vs. NCBI nr
Match: XP_031739825.1 (uncharacterized protein At3g17950 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 7.3e-95
Identity = 182/188 (96.81%), Postives = 182/188 (96.81%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 82  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 141

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAATVTAGGGSRKSKKTKRKTT APALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 142 RDQHTAATVTAGGGSRKSKKTKRKTTMAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 201

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVV ADQQRNGRSLFADGRVLPPAQTEEDTS    LCRFSVSLT
Sbjct: 202 RRFGDGAFYGNAVDLEGVVAADQQRNGRSLFADGRVLPPAQTEEDTSGAATLCRFSVSLT 261

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 262 GICSGGAG 269

[Close]

BLAST of Pay0022130 vs. NCBI nr
Match: XP_038895169.1 (uncharacterized protein At3g17950 [Benincasa hispida])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 180/188 (95.74%), Postives = 183/188 (97.34%), Query Frame = 0


Query: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60
           MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN
Sbjct: 1   MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQN 60

Query: 61  RDQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120
           RDQHTAAT  AGGGSRKSKKTKRKT+TAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE
Sbjct: 61  RDQHTAATAAAGGGSRKSKKTKRKTSTAPALVADRKRRWWRLCRDDGVKPASLGEFLEVE 120

Query: 121 RRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRFSVSLT 180
           RRFGDGAFYGNAVDLEGVV  DQQRNGRSLFADGRVLPPA+TE+DTSA GALCRFSVSLT
Sbjct: 121 RRFGDGAFYGNAVDLEGVVATDQQRNGRSLFADGRVLPPAETEDDTSAAGALCRFSVSLT 180

Query: 181 GICSGGAG 189
           GICSGGAG
Sbjct: 181 GICSGGAG 188

[Close]

BLAST of Pay0022130 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 158.7 bits (400), Expect = 4.6e-39
Identity = 105/205 (51.22%), Postives = 126/205 (61.46%), Query Frame = 0


Query: 12  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPA---ITFRVPSQNR-DQHTAA 71
           PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A   + FR  S+       A 
Sbjct: 7   PSSPTISSVSSSDLDTESTGSFFHDRSITLGTLMGFSFTATMPMPFRASSRRHVSPSVAI 66

Query: 72  TVTAGGGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASL 131
           +  +   +R++ + KR  + +      R+R+WWR CRDD       G+       K +SL
Sbjct: 67  SRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGNGIHRGTGDSKRSSL 126

Query: 132 GEFLEVERRFGDGAFYGNA-VDLEGVVTA---DQQ--RNGRSLFADGRVLPPAQTE---- 189
           GE+LEVERRFGD A Y +A  +LE  V A   DQQ     R+LFADGRVLPPA  E    
Sbjct: 127 GEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFADGRVLPPASAEVVTG 186

[Close]

BLAST of Pay0022130 vs. TAIR 10
Match: AT3G17950.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-23
Identity = 76/172 (44.19%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 45  MGVSFPA---ITFRVPSQNR-DQHTAATVTAGGGSRKSKKTKRKTTTAPALVADRKRRWW 104
           MG SF A   + FR  S+       A +  +   +R++ + KR  + +      R+R+WW
Sbjct: 1   MGFSFTATMPMPFRASSRRHVSPSVAISRASSSNARRNHQRKRPPSNSAEPEPHRRRKWW 60

Query: 105 RLCRDD-------GV-------KPASLGEFLEVERRFGDGAFYGNA-VDLEGVVTA---D 164
           R CRDD       G+       K +SLGE+LEVERRFGD A Y +A  +LE  V A   D
Sbjct: 61  RFCRDDDDDAAGNGIHRGTGDSKRSSLGEYLEVERRFGDEAVYNSAEAELEDAVVARYQD 120

Query: 165 QQ--RNGRSLFADGRVLPPAQTE----EDTSATGALCRFSVSLTGICSGGAG 189
           QQ     R+LFADGRVLPPA  E    E T    +LCRF VSLTGICSGG G
Sbjct: 121 QQPVMGERALFADGRVLPPASAEVVTGEGTPVATSLCRFPVSLTGICSGGGG 172

[Close]

BLAST of Pay0022130 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 4.4e-05
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 14  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHTAA 68
           SP+ SS SSSDLD++S GSFF DRS +LG L+G+S      R  ++ R+  T A
Sbjct: 47  SPSPSSQSSSDLDSQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGA 100

The following BLAST results are available for this feature:

BLAST of Pay0022130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DR24	6.5e-38	51.22	Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV...	[more]

BLAST of Pay0022130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUB1	1.2e-98	100.00	uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A5D3BLI7	1.2e-98	100.00	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CPP8	1.2e-98	100.00	uncharacterized protein At3g17950 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A0A0LQI1	3.5e-95	96.81	DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042870 PE...	[more]
A0A6J1E8Y2	3.0e-94	95.74	uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 ...	[more]

BLAST of Pay0022130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899568.1	2.4e-98	100.00	PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo] >XP_01689...	[more]
XP_008465627.2	2.4e-98	100.00	PREDICTED: uncharacterized protein At3g17950 isoform X1 [Cucumis melo]	[more]
TYJ99038.1	2.4e-98	100.00	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
XP_031739825.1	7.3e-95	96.81	uncharacterized protein At3g17950 [Cucumis sativus]	[more]
XP_038895169.1	1.6e-94	95.74	uncharacterized protein At3g17950 [Benincasa hispida]	[more]

BLAST of Pay0022130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17950.1	4.6e-39	51.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G17950.2	1.2e-23	44.19	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G02440.1	4.4e-05	50.00	unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..32
None	No IPR available	PANTHER	PTHR33544:SF15	BNAANNG11020D PROTEIN	coord: 1..188
IPR040344	Uncharacterized protein At3g17950-like	PANTHER	PTHR33544	FAMILY NOT NAMED	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0022130.1	Pay0022130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding