Pay0022047 (gene) Melon (Payzawat) v1

Overview


Name	Pay0022047
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Transposase
Location	chr04: 5258863 .. 5259327 (-)
RNA-Seq Expression	Pay0022047
Synteny	Pay0022047

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAAATCATGGATGCACAAAAGTAGATTATCCAAAGAATATGAGTTGGGTGTGGAAAATTTCATCAAATTTGGATTTTCAAATACAAGTACCTCCTACATTCGTTGTCCTTGTTTAAAATGTGGGAATTGTGAAAAGCATAGTAGAAAGGGTGTTAGAGATCATTTATATGTTAATGGTATTGATGAAAGTTATAAAATTTGGTTTTGGCATGGTGAAGAACTTCCTAACTCATCTTTTTATGGAGAATCTTCAAAGTTTGACACACATACATGTGAAGAGAATGATGTTGGAAGTGTAAAAGAAATGATTGAAGTTGCTCACGAGGAGTATTCAAAAGACCCAAATGGATTTGAGAAGTTGCTTATTGATGCAGAAAAACCATTATATGAAGGATGTAAAAAGTACACCAAGTTGTCTACTCTAGTTAAATTGTATAATTTAAAAGTTAGATATGGATGA

mRNA sequence

ATGGATAAATCATGGATGCACAAAAGTAGATTATCCAAAGAATATGAGTTGGGTGTGGAAAATTTCATCAAATTTGGATTTTCAAATACAAGTACCTCCTACATTCGTTGTCCTTGTTTAAAATGTGGGAATTGTGAAAAGCATAGTAGAAAGGGTGTTAGAGATCATTTATATGTTAATGGTATTGATGAAAGTTATAAAATTTGGTTTTGGCATGGTGAAGAACTTCCTAACTCATCTTTTTATGGAGAATCTTCAAAGTTTGACACACATACATGTGAAGAGAATGATGTTGGAAGTGTAAAAGAAATGATTGAAGTTGCTCACGAGGAGTATTCAAAAGACCCAAATGGATTTGAGAAGTTGCTTATTGATGCAGAAAAACCATTATATGAAGGATGTAAAAAGTACACCAAGTTGTCTACTCTAGTTAAATTGTATAATTTAAAAGTTAGATATGGATGA

Coding sequence (CDS)

ATGGATAAATCATGGATGCACAAAAGTAGATTATCCAAAGAATATGAGTTGGGTGTGGAAAATTTCATCAAATTTGGATTTTCAAATACAAGTACCTCCTACATTCGTTGTCCTTGTTTAAAATGTGGGAATTGTGAAAAGCATAGTAGAAAGGGTGTTAGAGATCATTTATATGTTAATGGTATTGATGAAAGTTATAAAATTTGGTTTTGGCATGGTGAAGAACTTCCTAACTCATCTTTTTATGGAGAATCTTCAAAGTTTGACACACATACATGTGAAGAGAATGATGTTGGAAGTGTAAAAGAAATGATTGAAGTTGCTCACGAGGAGTATTCAAAAGACCCAAATGGATTTGAGAAGTTGCTTATTGATGCAGAAAAACCATTATATGAAGGATGTAAAAAGTACACCAAGTTGTCTACTCTAGTTAAATTGTATAATTTAAAAGTTAGATATGGATGA

Protein sequence

MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVNGIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGFEKLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG

Homology

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BLAST of Pay0022047 vs. ExPASy TrEMBL
Match: A0A5A7U2S8 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002090 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 3.8e-79
Identity = 142/154 (92.21%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MDK WMHKSRLSKEYELGVE+FI FGFSNTSTSYIRCPCLKCGNCEKHSRK VRDHLYVN
Sbjct: 1   MDKLWMHKSRLSKEYELGVESFINFGFSNTSTSYIRCPCLKCGNCEKHSRKDVRDHLYVN 60

Query: 61  GIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGFE 120
           GIDESYKIWFWHG+     SFYGESSKFDTHTCEENDVGSVKE+IEVAHEEYSKDPNGFE
Sbjct: 61  GIDESYKIWFWHGKHFLPQSFYGESSKFDTHTCEENDVGSVKEIIEVAHEEYSKDPNGFE 120

Query: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           KLLIDAEKPLYEGCKKYTKLSTLVKLYNLK RYG
Sbjct: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKGRYG 154

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BLAST of Pay0022047 vs. ExPASy TrEMBL
Match: A0A5D3CRI9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001560 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69
Identity = 128/154 (83.12%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MD SWMHKSRLSK+Y LGVENFI FGFSNT  + IRCPCLK GNCEK SR  +RDHLYVN
Sbjct: 1   MDGSWMHKSRLSKDYALGVENFISFGFSNTKDASIRCPCLKRGNCEKQSRTTIRDHLYVN 60

Query: 61  GIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGFE 120
           GIDESYKIWFWHGE+LP SS Y ESSKFDTH  EENDVGS+ EMIEVAHEEYSKDPN FE
Sbjct: 61  GIDESYKIWFWHGEQLPESSLYEESSKFDTHMYEENDVGSINEMIEVAHEEYSKDPNEFE 120

Query: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           KLL DA+KPLYEGCK +TKLSTLVKLYNLKVRYG
Sbjct: 121 KLLNDAKKPLYEGCKTFTKLSTLVKLYNLKVRYG 154

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BLAST of Pay0022047 vs. ExPASy TrEMBL
Match: A0A5A7UL63 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00070 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69
Identity = 126/154 (81.82%), Postives = 136/154 (88.31%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MD+SWMHKSRLSK+YELGVENFI FGFSNT  + IRCP LKCGNCEK SR  +RDHLYVN
Sbjct: 1   MDRSWMHKSRLSKDYELGVENFISFGFSNTKDASIRCPYLKCGNCEKQSRTTIRDHLYVN 60

Query: 61  GIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGFE 120
           GIDESYK+WFWHGE+LP S  Y ESSKFDT+  EENDVGS+ EMIEVAHEEYSKDPN F 
Sbjct: 61  GIDESYKVWFWHGEQLPESFLYEESSKFDTYMYEENDVGSINEMIEVAHEEYSKDPNEFA 120

Query: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           KLL DAEKPLYEGCKK+TKLSTLVKLYNL+VRYG
Sbjct: 121 KLLNDAEKPLYEGCKKFTKLSTLVKLYNLRVRYG 154

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BLAST of Pay0022047 vs. ExPASy TrEMBL
Match: A0A5A7TUX7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.9e-69
Identity = 128/155 (82.58%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MD+SWMHKSRL K+YELGVENFI FGFSNT  + IRCPCLKCGNCEK SR  +RDHLYVN
Sbjct: 1   MDRSWMHKSRLPKDYELGVENFISFGFSNTKDASIRCPCLKCGNCEKQSRTTIRDHLYVN 60

Query: 61  GIDESYKIWFWHGE-ELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGF 120
           GIDESYKIWFWHGE +LP SS Y ESSKFDTH  E NDVG + EMIEVAHEEYSKDPN F
Sbjct: 61  GIDESYKIWFWHGEQQLPESSLYEESSKFDTHMYEVNDVGRINEMIEVAHEEYSKDPNEF 120

Query: 121 EKLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           EKLL DAEK LYEGCKK+TKLSTLVKLYNLKVRYG
Sbjct: 121 EKLLNDAEKSLYEGCKKFTKLSTLVKLYNLKVRYG 155

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BLAST of Pay0022047 vs. ExPASy TrEMBL
Match: A0A5D3BVS7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.9e-69
Identity = 128/155 (82.58%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MD+SWMHKSRL K+YELGVENFI FGFSNT  + IRCPCLKCGNCEK SR  +RDHLYVN
Sbjct: 1   MDRSWMHKSRLPKDYELGVENFISFGFSNTKDASIRCPCLKCGNCEKQSRTTIRDHLYVN 60

Query: 61  GIDESYKIWFWHGE-ELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGF 120
           GIDESYKIWFWHGE +LP SS Y ESSKFDTH  E NDVG + EMIEVAHEEYSKDPN F
Sbjct: 61  GIDESYKIWFWHGEQQLPESSLYEESSKFDTHMYEVNDVGRINEMIEVAHEEYSKDPNEF 120

Query: 121 EKLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           EKLL DAEK LYEGCKK+TKLSTLVKLYNLKVRYG
Sbjct: 121 EKLLNDAEKSLYEGCKKFTKLSTLVKLYNLKVRYG 155

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BLAST of Pay0022047 vs. NCBI nr
Match: XP_031742381.1 (uncharacterized protein LOC116404332 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 2.0e-82
Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MDKSWMHKSRLSK+YELGVENFIKFGFSNT++SYIRCPCLKCGNCEKHSRKGVRDHLYVN
Sbjct: 1   MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60

Query: 61  GIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGFE 120
           GIDESYKIWFWHGEELPNSSFY ESSKFD HTCE+ DVGSVKEMIEVAHEEYSKDP GFE
Sbjct: 61  GIDESYKIWFWHGEELPNSSFYDESSKFDIHTCEDQDVGSVKEMIEVAHEEYSKDPTGFE 120

Query: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG
Sbjct: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 154

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BLAST of Pay0022047 vs. NCBI nr
Match: XP_031741731.1 (uncharacterized protein LOC116403926 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 5.8e-82
Identity = 145/154 (94.16%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MDKSWMHKSRLSK+YELGVENFIKFGFSNT++SYIRCPCLKCGNCEKHSRKGVRDHL+VN
Sbjct: 1   MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLHVN 60

Query: 61  GIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGFE 120
           GIDESYKIWFWHGEELPNSSFY ESSKFD HTCE+ DVGSVKEMIEVAHEEYSKDP GFE
Sbjct: 61  GIDESYKIWFWHGEELPNSSFYDESSKFDNHTCEDRDVGSVKEMIEVAHEEYSKDPTGFE 120

Query: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG
Sbjct: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 154

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BLAST of Pay0022047 vs. NCBI nr
Match: XP_031742172.1 (uncharacterized protein LOC116404095 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 4.9e-81
Identity = 143/154 (92.86%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MDKSWMHKSRLSK+YELGVENFIKFGFSNT++SYIRCPCLKCGNCEK++R+GVRDHLYVN
Sbjct: 1   MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKNNRRGVRDHLYVN 60

Query: 61  GIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGFE 120
           GIDESYKIWFWHGEELPNSSFY ESSKFD HTCE++DVGSVKEMIEVAHEEYSKDP GFE
Sbjct: 61  GIDESYKIWFWHGEELPNSSFYDESSKFDIHTCEDDDVGSVKEMIEVAHEEYSKDPTGFE 120

Query: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG
Sbjct: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 154

[Close]

BLAST of Pay0022047 vs. NCBI nr
Match: XP_031739988.1 (uncharacterized protein LOC116403337 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 146/155 (94.19%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MDKSWMHKSRLSK+YELGVENFIKFGFSNTS+SYIRCPCLKCGNCEKHSRKGVRDHLYVN
Sbjct: 1   MDKSWMHKSRLSKDYELGVENFIKFGFSNTSSSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60

Query: 61  GIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEEN-DVGSVKEMIEVAHEEYSKDPNGF 120
           GIDESYKIWFWHGEELPNSSFY ESSKF  HTCE++ DVGSVKEMIEVAHEEYSKDP GF
Sbjct: 61  GIDESYKIWFWHGEELPNSSFYDESSKFGIHTCEDHQDVGSVKEMIEVAHEEYSKDPTGF 120

Query: 121 EKLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           EKLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG
Sbjct: 121 EKLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155

[Close]

BLAST of Pay0022047 vs. NCBI nr
Match: XP_031739753.1 (uncharacterized protein LOC116403284 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 2.4e-80
Identity = 143/154 (92.86%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MDKSWMHKSRLSKEYELGVENFIKFGFSNTSTSYIRCPCLKCGNCEKHSRKGVRDHLYVN 60
           MDKSWMHKSRLSK+YELGVENFIKFGFSNT++SYIRCPCLKCGNCEKHSRKGVRDHLYVN
Sbjct: 2   MDKSWMHKSRLSKDYELGVENFIKFGFSNTTSSYIRCPCLKCGNCEKHSRKGVRDHLYVN 61

Query: 61  GIDESYKIWFWHGEELPNSSFYGESSKFDTHTCEENDVGSVKEMIEVAHEEYSKDPNGFE 120
           GIDESYKIWFWHGEELPNSSFY ESSKFD HTCE+  VGSVKEMIEV HEEYSK+P GFE
Sbjct: 62  GIDESYKIWFWHGEELPNSSFYDESSKFDIHTCEDQYVGSVKEMIEVTHEEYSKNPTGFE 121

Query: 121 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155
           KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG
Sbjct: 122 KLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYG 155

The following BLAST results are available for this feature:

BLAST of Pay0022047 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0022047 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2S8	3.8e-79	92.21	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002090 P...	[more]
A0A5D3CRI9	2.1e-69	83.12	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001560 P...	[more]
A0A5A7UL63	2.7e-69	81.82	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00070 P...	[more]
A0A5A7TUX7	7.9e-69	82.58	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE...	[more]
A0A5D3BVS7	7.9e-69	82.58	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE...	[more]

BLAST of Pay0022047 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742381.1	2.0e-82	94.81	uncharacterized protein LOC116404332 [Cucumis sativus]	[more]
XP_031741731.1	5.8e-82	94.16	uncharacterized protein LOC116403926 [Cucumis sativus]	[more]
XP_031742172.1	4.9e-81	92.86	uncharacterized protein LOC116404095 [Cucumis sativus]	[more]
XP_031739988.1	1.1e-80	94.19	uncharacterized protein LOC116403337 [Cucumis sativus]	[more]
XP_031739753.1	2.4e-80	92.86	uncharacterized protein LOC116403284 [Cucumis sativus]	[more]

BLAST of Pay0022047 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029480	Transposase-associated domain	PFAM	PF13963	Transpos_assoc	coord: 3..74 e-value: 9.5E-22 score: 76.9
None	No IPR available	PANTHER	PTHR10775:SF149	TRANSPOSASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..152
None	No IPR available	PANTHER	PTHR10775	UNCHARACTERIZED	coord: 1..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0022047.1	Pay0022047.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity