Pay0022012 (gene) Melon (Payzawat) v1

Overview


Name	Pay0022012
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	EF hand calcium-binding protein family
Location	chr06: 14388590 .. 14389172 (+)
RNA-Seq Expression	Pay0022012
Synteny	Pay0022012

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAGAAAAAGAAAAGGATATCTCTCTCTATTCAAATTTCAAATCCCCTTCACATCATCACAATCAATCCCATGGCCAATAACAACCCCTCCCTTTCTATTTCAACTCCTGGATCTTCCTCCTTAGGCTCCATGGACGAAGTCATCAGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCTCAGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGGCGAGATCCACCGCATTATGTCCGAGATCGACAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGTTCCTGTTTATTTTTTTTATTGATCATTTTTTTACTGGTTGACTTTGTGTTTTTTATCTTGTTTTTTGGTATTTTTATTGTACAGTGTATAATTCAGGTGAATTCATTAGGAAATTGA

mRNA sequence

AGAAAAGAAAAAGAAAAGGATATCTCTCTCTATTCAAATTTCAAATCCCCTTCACATCATCACAATCAATCCCATGGCCAATAACAACCCCTCCCTTTCTATTTCAACTCCTGGATCTTCCTCCTTAGGCTCCATGGACGAAGTCATCAGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCTCAGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGGCGAGATCCACCGCATTATGTCCGAGATCGACAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGTTCCTGTTTATTTTTTTTATTGATCATTTTTTTACTGGTTGACTTTGTGTTTTTTATCTTGTTTTTTGGTATTTTTATTGTACAGTGTATAATTCAGGTGAATTCATTAGGAAATTGA

Coding sequence (CDS)

ATGGCCAATAACAACCCCTCCCTTTCTATTTCAACTCCTGGATCTTCCTCCTTAGGCTCCATGGACGAAGTCATCAGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCTCAGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGGCGAGATCCACCGCATTATGTCCGAGATCGACAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGTTCCTGTTTATTTTTTTTATTGATCATTTTTTTACTGGTTGACTTTGTGTTTTTTATCTTGTTTTTTGGTATTTTTATTGTACAGTGTATAATTCAGGTGAATTCATTAGGAAATTGA

Protein sequence

MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCSCLFFLLIIFLLVDFVFFILFFGIFIVQCIIQVNSLGN

Homology

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BLAST of Pay0022012 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-29
Identity = 66/118 (55.93%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 18  LGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIMSEIDKDGDGFIDL 77
           LGSM+++ +VF +FDKN DGKIS+ EL   +G LS N S  E   +M E D DG+GFIDL
Sbjct: 10  LGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDL 69

Query: 78  DEFTDF-----TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDC 131
           DEF         SS+    +DL++AFDLYD+D+NG ISA ELHSV+K LGEKCS++DC
Sbjct: 70  DEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDC 127

[Close]

BLAST of Pay0022012 vs. ExPASy Swiss-Prot
Match: P25070 (Calcium-binding protein CML24 OS=Arabidopsis thaliana OX=3702 GN=CML24 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.5e-28
Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 16  SSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIMSEIDKDGDGFI 75
           S LGSMD++ +VF +FDKNGDGKISV EL   +  LS   S  E   +M + D DG+GFI
Sbjct: 10  SCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFI 69

Query: 76  DLDEFTDFTSSSTGGN-------KDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLK 131
           DLDEF        GG         DL++AF+LYD+D NG ISAKELHSV+K LGEKCS++
Sbjct: 70  DLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQ 129

[Close]

BLAST of Pay0022012 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.2e-28
Identity = 63/130 (48.46%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MA+ NP  +  TP +  + + +E+ +VF++FD NGDGKISV ELG     +  + +  E+
Sbjct: 1   MASANPETAKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETEL 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           +R++ E+D D DG+I+LDEF+    SS+    +++DAFDLYD DKNGLISA ELH VL R
Sbjct: 61  NRVLEEVDTDRDGYINLDEFSTLCRSSSSA-AEIRDAFDLYDQDKNGLISASELHQVLNR 120

Query: 121 LGEKCSLKDC 131
           LG  CS++DC
Sbjct: 121 LGMSCSVEDC 129

[Close]

BLAST of Pay0022012 vs. ExPASy Swiss-Prot
Match: Q9M7R0 (Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.7e-24
Identity = 65/134 (48.51%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 3   NNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHR 62
           N+ PS+ +  P        +EV  VFN+FD NGDGKIS  EL   L  L  N S  EI R
Sbjct: 8   NSKPSVYLQEP--------NEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGR 67

Query: 63  IMSEIDKDGDGFIDLDEFTDFTSS------STGGNKDLQDAFDLYDIDKNGLISAKELHS 122
           IM EID D DGFI++ EF  F  +      S+GG  +L++AF+LYD D NGLIS+ ELH 
Sbjct: 68  IMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHK 127

Query: 123 VLKRLGEKCSLKDC 131
           +L RLGE+ +  DC
Sbjct: 128 ILTRLGERYAEHDC 133

[Close]

BLAST of Pay0022012 vs. ExPASy Swiss-Prot
Match: Q9C9U8 (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.1e-23
Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MAN N     ST  S++  +  E+ +VF+KFD NGDGKISVSELG     +  + +  E+
Sbjct: 1   MANTNLE---STNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEEL 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           +R++ EID D DGFI+ +EF     SS+    ++++AFDLYD +KNGLIS+ E+H VL R
Sbjct: 61  NRVLDEIDIDCDGFINQEEFATICRSSSSA-VEIREAFDLYDQNKNGLISSSEIHKVLNR 120

Query: 121 LGEKCSLKDC 131
           LG  CS++DC
Sbjct: 121 LGMTCSVEDC 126

[Close]

BLAST of Pay0022012 vs. ExPASy TrEMBL
Match: A0A5A7UHX3 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001160 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI
Sbjct: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCC 132
           LGEKCSLKDCC
Sbjct: 121 LGEKCSLKDCC 131

[Close]

BLAST of Pay0022012 vs. ExPASy TrEMBL
Match: A0A1S3C5W9 (probable calcium-binding protein CML27 OS=Cucumis melo OX=3656 GN=LOC103496821 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI
Sbjct: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCC 132
           LGEKCSLKDCC
Sbjct: 121 LGEKCSLKDCC 131

[Close]

BLAST of Pay0022012 vs. ExPASy TrEMBL
Match: A0A0A0LCM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60
Identity = 124/131 (94.66%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MA NN SLSISTPGSS+LGSMDE+IRVFNKFDKNGDGKISV+EL AALGELSGNIST EI
Sbjct: 1   MAKNN-SLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNISTDEI 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCC 132
           LGEKCSLKDCC
Sbjct: 121 LGEKCSLKDCC 130

[Close]

BLAST of Pay0022012 vs. ExPASy TrEMBL
Match: A0A6J1CNU4 (probable calcium-binding protein CML23 OS=Momordica charantia OX=3673 GN=LOC111013180 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.6e-46
Identity = 101/134 (75.37%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MA  + S   ST    +LGSMDEV +VFNKFDKNGDGKISV+ELG ALGEL G +S+ E+
Sbjct: 3   MAKKSVSDPSSTNLGGALGSMDEVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEV 62

Query: 61  HRIMSEIDKDGDGFIDLDEFTDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSV 120
            RIM+EIDKDGDGFIDLDEF +F    S++ GGNKDLQDAFDLYDIDKNGLISAKELHSV
Sbjct: 63  RRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSV 122

Query: 121 LKRLGEKCSLKDCC 132
           LKRLGEKCSLKDCC
Sbjct: 123 LKRLGEKCSLKDCC 136

[Close]

BLAST of Pay0022012 vs. ExPASy TrEMBL
Match: A0A6J1G9H5 (probable calcium-binding protein CML23 OS=Cucurbita moschata OX=3662 GN=LOC111452166 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.9e-45
Identity = 100/130 (76.92%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 9   SISTPGS----SSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIM 68
           S+S P S     +LGSMDEVI VF KFDKNGDGKIS+ EL AALGEL G IS  EI RIM
Sbjct: 7   SVSNPSSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKISDDEIRRIM 66

Query: 69  SEIDKDGDGFIDLDEFTDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 128
           SEIDKDG+GFIDLDEF +F   +SS+ GG+KDLQDAFDLYD+DKNGLISAKELHSVLKRL
Sbjct: 67  SEIDKDGNGFIDLDEFAEFHQNSSSTGGGSKDLQDAFDLYDVDKNGLISAKELHSVLKRL 126

Query: 129 GEKCSLKDCC 132
           GEKCSLKDCC
Sbjct: 127 GEKCSLKDCC 136

[Close]

BLAST of Pay0022012 vs. NCBI nr
Match: XP_008457051.1 (PREDICTED: probable calcium-binding protein CML27 [Cucumis melo] >KAA0053141.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa] >TYK01546.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa])

HSP 1 Score: 258.5 bits (659), Expect = 4.1e-65
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI
Sbjct: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCC 132
           LGEKCSLKDCC
Sbjct: 121 LGEKCSLKDCC 131

[Close]

BLAST of Pay0022012 vs. NCBI nr
Match: XP_004145834.1 (probable calcium-binding protein CML23 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 6.8e-60
Identity = 124/131 (94.66%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MA NN SLSISTPGSS+LGSMDE+IRVFNKFDKNGDGKISV+EL AALGELSGNIST EI
Sbjct: 1   MAKNN-SLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNISTDEI 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCC 132
           LGEKCSLKDCC
Sbjct: 121 LGEKCSLKDCC 130

[Close]

BLAST of Pay0022012 vs. NCBI nr
Match: KAE8650604.1 (hypothetical protein Csa_010664 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-55
Identity = 113/118 (95.76%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 14  GSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIMSEIDKDGDG 73
           GSS+LGSMDE+IRVFNKFDKNGDGKISV+EL AALGELSGNIST EIHRIMSEIDKDGDG
Sbjct: 6   GSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNISTDEIHRIMSEIDKDGDG 65

Query: 74  FIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCC 132
           FIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCC
Sbjct: 66  FIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCC 123

[Close]

BLAST of Pay0022012 vs. NCBI nr
Match: XP_038879983.1 (probable calcium-binding protein CML23 [Benincasa hispida])

HSP 1 Score: 211.1 bits (536), Expect = 7.6e-51
Identity = 113/134 (84.33%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MA  N SLSIS PG SSLGSMD+VI+VFNKFDKNGDGKISV+ELGAAL EL G IST EI
Sbjct: 1   MAKKNNSLSISNPG-SSLGSMDDVIKVFNKFDKNGDGKISVNELGAALSELGGKISTDEI 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSV 120
            RIMSEIDKDGDGFIDLDEF +F    SSS+G NKDLQDAFDLYDIDKNGLISAKELHSV
Sbjct: 61  RRIMSEIDKDGDGFIDLDEFAEFHQDASSSSGCNKDLQDAFDLYDIDKNGLISAKELHSV 120

Query: 121 LKRLGEKCSLKDCC 132
           LKRLGEKCSLKDCC
Sbjct: 121 LKRLGEKCSLKDCC 133

[Close]

BLAST of Pay0022012 vs. NCBI nr
Match: XP_022143269.1 (probable calcium-binding protein CML23 [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 9.6e-46
Identity = 101/134 (75.37%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MA  + S   ST    +LGSMDEV +VFNKFDKNGDGKISV+ELG ALGEL G +S+ E+
Sbjct: 3   MAKKSVSDPSSTNLGGALGSMDEVTKVFNKFDKNGDGKISVNELGDALGELGGKVSSDEV 62

Query: 61  HRIMSEIDKDGDGFIDLDEFTDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSV 120
            RIM+EIDKDGDGFIDLDEF +F    S++ GGNKDLQDAFDLYDIDKNGLISAKELHSV
Sbjct: 63  RRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSV 122

Query: 121 LKRLGEKCSLKDCC 132
           LKRLGEKCSLKDCC
Sbjct: 123 LKRLGEKCSLKDCC 136

[Close]

BLAST of Pay0022012 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 131.0 bits (328), Expect = 9.3e-31
Identity = 66/118 (55.93%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 18  LGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIMSEIDKDGDGFIDL 77
           LGSM+++ +VF +FDKN DGKIS+ EL   +G LS N S  E   +M E D DG+GFIDL
Sbjct: 10  LGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDL 69

Query: 78  DEFTDF-----TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDC 131
           DEF         SS+    +DL++AFDLYD+D+NG ISA ELHSV+K LGEKCS++DC
Sbjct: 70  DEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDC 127

[Close]

BLAST of Pay0022012 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 16  SSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIMSEIDKDGDGFI 75
           S LGSMD++ +VF +FDKNGDGKISV EL   +  LS   S  E   +M + D DG+GFI
Sbjct: 10  SCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFI 69

Query: 76  DLDEFTDFTSSSTGGN-------KDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLK 131
           DLDEF        GG         DL++AF+LYD+D NG ISAKELHSV+K LGEKCS++
Sbjct: 70  DLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQ 129

[Close]

BLAST of Pay0022012 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29
Identity = 63/130 (48.46%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MA+ NP  +  TP +  + + +E+ +VF++FD NGDGKISV ELG     +  + +  E+
Sbjct: 1   MASANPETAKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETEL 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           +R++ E+D D DG+I+LDEF+    SS+    +++DAFDLYD DKNGLISA ELH VL R
Sbjct: 61  NRVLEEVDTDRDGYINLDEFSTLCRSSSSA-AEIRDAFDLYDQDKNGLISASELHQVLNR 120

Query: 121 LGEKCSLKDC 131
           LG  CS++DC
Sbjct: 121 LGMSCSVEDC 129

[Close]

BLAST of Pay0022012 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29
Identity = 63/130 (48.46%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MA+ NP  +  TP +  + + +E+ +VF++FD NGDGKISV ELG     +  + +  E+
Sbjct: 1   MASANPETAKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETEL 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           +R++ E+D D DG+I+LDEF+    SS+    +++DAFDLYD DKNGLISA ELH VL R
Sbjct: 61  NRVLEEVDTDRDGYINLDEFSTLCRSSSSA-AEIRDAFDLYDQDKNGLISASELHQVLNR 120

Query: 121 LGEKCSLKDC 131
           LG  CS++DC
Sbjct: 121 LGMSCSVEDC 129

[Close]

BLAST of Pay0022012 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-24
Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEI 60
           MAN N     ST  S++  +  E+ +VF+KFD NGDGKISVSELG     +  + +  E+
Sbjct: 1   MANTNLE---STNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEEL 60

Query: 61  HRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           +R++ EID D DGFI+ +EF     SS+    ++++AFDLYD +KNGLIS+ E+H VL R
Sbjct: 61  NRVLDEIDIDCDGFINQEEFATICRSSSSA-VEIREAFDLYDQNKNGLISSSEIHKVLNR 120

Query: 121 LGEKCSLKDC 131
           LG  CS++DC
Sbjct: 121 LGMTCSVEDC 126

The following BLAST results are available for this feature:

BLAST of Pay0022012 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8Y1	1.3e-29	55.93	Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 ...	[more]
P25070	2.5e-28	54.92	Calcium-binding protein CML24 OS=Arabidopsis thaliana OX=3702 GN=CML24 PE=2 SV=2	[more]
Q9LE22	4.2e-28	48.46	Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ...	[more]
Q9M7R0	3.7e-24	48.51	Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
Q9C9U8	3.1e-23	47.69	Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 ...	[more]

BLAST of Pay0022012 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHX3	2.0e-65	100.00	Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C5W9	2.0e-65	100.00	probable calcium-binding protein CML27 OS=Cucumis melo OX=3656 GN=LOC103496821 P...	[more]
A0A0A0LCM1	3.3e-60	94.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1	[more]
A0A6J1CNU4	4.6e-46	75.37	probable calcium-binding protein CML23 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1G9H5	3.9e-45	76.92	probable calcium-binding protein CML23 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Pay0022012 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457051.1	4.1e-65	100.00	PREDICTED: probable calcium-binding protein CML27 [Cucumis melo] >KAA0053141.1 p...	[more]
XP_004145834.1	6.8e-60	94.66	probable calcium-binding protein CML23 [Cucumis sativus]	[more]
KAE8650604.1	1.3e-55	95.76	hypothetical protein Csa_010664 [Cucumis sativus]	[more]
XP_038879983.1	7.6e-51	84.33	probable calcium-binding protein CML23 [Benincasa hispida]	[more]
XP_022143269.1	9.6e-46	75.37	probable calcium-binding protein CML23 [Momordica charantia]	[more]

BLAST of Pay0022012 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66400.1	9.3e-31	55.93	calmodulin like 23	[more]
AT5G37770.1	1.8e-29	54.92	EF hand calcium-binding protein family	[more]
AT1G18210.1	3.0e-29	48.46	Calcium-binding EF-hand family protein	[more]
AT1G18210.2	3.0e-29	48.46	Calcium-binding EF-hand family protein	[more]
AT1G73630.1	2.2e-24	47.69	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 59..87 e-value: 2.1E-5 score: 34.0 coord: 23..51 e-value: 9.5E-6 score: 35.1 coord: 93..121 e-value: 3.2E-5 score: 33.4
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 93..122 e-value: 1.1E-6 score: 27.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 25..84 e-value: 3.8E-12 score: 46.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 19..54 score: 14.569197
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 55..83 score: 9.26907
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 89..124 score: 14.318138
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 23..83 e-value: 9.61795E-19 score: 73.7361
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 59..119 e-value: 5.4905E-8 score: 45.6165
None	No IPR available	GENE3D	1.10.238.10		coord: 88..131 e-value: 8.2E-10 score: 40.4
None	No IPR available	GENE3D	1.10.238.10		coord: 11..87 e-value: 4.1E-20 score: 74.5
None	No IPR available	PANTHER	PTHR10891:SF794	CALCIUM-BINDING PROTEIN CML23-RELATED	coord: 16..131
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 16..131
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 102..114
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 32..44
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 21..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0022012.1	Pay0022012.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding