Pay0021783 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021783
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2
Location	chr04: 20533332 .. 20533991 (+)
RNA-Seq Expression	Pay0021783
Synteny	Pay0021783

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCACAGCGGTGTCCACTCTTATTCTCTCATCGACGGCTCCCTCACCATCTTCTTCCTCTTCTTCTTCCTCCGCTAGGGCACAACAGCACTGCAGCATCCCAAATTTTGTGCTCCTTCCTCTTCTCCCTATGAACCTCTCTCCCTTGTCAATTCAAGCTCTACCTCGCTGGTTCTCATACTCACGGTATTGTATCTGTAAGTTTTTTTAAACCCTTTGAACTTCTTGTCGACTTCTTATGTTGGTTTTTGGGTTCTTCTTGAACTGTAAACAGTGTTATTCGTAGAACTGCAGATGCCATTACAAATCTTGCGCATGAGAACATTTTCATCAAAACGCGAGTTAGGTATGTTTAGTTGATTCACTTTTAAGTTTTATAAGTTTCATTGAAGCCTGTTCTCAATGAGGATTTAAATATTTAGGATGGAAGGTGGGAATATTCCTCCGCTTGTTGAGTTGCTTGAATTTTACTGACACCAAGGTTGAAAGACTACTGCTGGGGCATTATGAACATTGGCCTTTAAGAATGATGAGAATAAAAACCAGGTAATTGGCATTTTACTTCAAATTGGATGTTTAACTTTAGGTTTAACATGTAAATCATTTGTTATCTTCGCTAACTGGCAGATTGTTGAGTGCAATGCTCTCCCCACACTGA

mRNA sequence

ATGCCCACAGCGGTGTCCACTCTTATTCTCTCATCGACGGCTCCCTCACCATCTTCTTCCTCTTCTTCTTCCTCCGCTAGGGCACAACAGCACTGCAGCATCCCAAATTTTGTGCTCCTTCCTCTTCTCCCTATGAACCTCTCTCCCTTGTCAATTCAAGCTCTACCTCGCTGGTTCTCATACTCACGGTATTGTATCTTGTTATTCGTAGAACTGCAGATGCCATTACAAATCTTGCGCATGAGAACATTTTCATCAAAACGCGAGTTAGGATGGAAGGTGGGAATATTCCTCCGCTTGTTGAGTTGCTTGAATTTTACTGACACCAAGGTTGAAAGACTACTGCTGGGGCATTATGAACATTGGCCTTTAAGAATGATGAGAATAAAAACCAGATTGTTGAGTGCAATGCTCTCCCCACACTGA

Coding sequence (CDS)

ATGCCCACAGCGGTGTCCACTCTTATTCTCTCATCGACGGCTCCCTCACCATCTTCTTCCTCTTCTTCTTCCTCCGCTAGGGCACAACAGCACTGCAGCATCCCAAATTTTGTGCTCCTTCCTCTTCTCCCTATGAACCTCTCTCCCTTGTCAATTCAAGCTCTACCTCGCTGGTTCTCATACTCACGGTATTGTATCTTGTTATTCGTAGAACTGCAGATGCCATTACAAATCTTGCGCATGAGAACATTTTCATCAAAACGCGAGTTAGGATGGAAGGTGGGAATATTCCTCCGCTTGTTGAGTTGCTTGAATTTTACTGACACCAAGGTTGAAAGACTACTGCTGGGGCATTATGAACATTGGCCTTTAAGAATGATGAGAATAAAAACCAGATTGTTGAGTGCAATGCTCTCCCCACACTGA

Protein sequence

MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFSYSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYEHWPLRMMRIKTRLLSAMLSPH

Homology

[Close]

BLAST of Pay0021783 vs. ExPASy TrEMBL
Match: A0A1S4E5B3 (uncharacterized protein LOC103503176 OS=Cucumis melo OX=3656 GN=LOC103503176 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 8.6e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
           MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS
Sbjct: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60

Query: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYE 120
           YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYE
Sbjct: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYE 120

Query: 121 HWPLRMMRIKTRLLSAMLSPH 142
           HWPLRMMRIKTRLLSAMLSPH
Sbjct: 121 HWPLRMMRIKTRLLSAMLSPH 141

[Close]

BLAST of Pay0021783 vs. ExPASy TrEMBL
Match: A0A5A7VH19 (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00410 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.1e-51
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
           MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS
Sbjct: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60

Query: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKV 112
           YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTK+
Sbjct: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]

BLAST of Pay0021783 vs. ExPASy TrEMBL
Match: A0A5A7VHJ6 (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002570 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.1e-51
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
           MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS
Sbjct: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60

Query: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKV 112
           YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTK+
Sbjct: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]

BLAST of Pay0021783 vs. ExPASy TrEMBL
Match: A0A5D3CSL1 (Vacuolar protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00040 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.1e-51
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
           MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS
Sbjct: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60

Query: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKV 112
           YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTK+
Sbjct: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]

BLAST of Pay0021783 vs. ExPASy TrEMBL
Match: A0A5A7TD99 (Mucin-3A-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00310 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 58/63 (92.06%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 1  MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
          M TAVSTLILSSTAPSPSS SSSS ARAQQHCSIP FVLLPLL MNLSPLSIQALPRWFS
Sbjct: 1  MLTAVSTLILSSTAPSPSSYSSSSFARAQQHCSIPKFVLLPLLLMNLSPLSIQALPRWFS 60

Query: 61 YSR 64
          YSR
Sbjct: 61 YSR 63

[Close]

BLAST of Pay0021783 vs. NCBI nr
Match: XP_016903412.1 (PREDICTED: uncharacterized protein LOC103503176 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
           MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS
Sbjct: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60

Query: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYE 120
           YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYE
Sbjct: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKVERLLLGHYE 120

Query: 121 HWPLRMMRIKTRLLSAMLSPH 142
           HWPLRMMRIKTRLLSAMLSPH
Sbjct: 121 HWPLRMMRIKTRLLSAMLSPH 141

[Close]

BLAST of Pay0021783 vs. NCBI nr
Match: KAA0064939.1 (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 6.3e-51
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
           MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS
Sbjct: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60

Query: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKV 112
           YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTK+
Sbjct: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]

BLAST of Pay0021783 vs. NCBI nr
Match: TYK14188.1 (Vacuolar protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 6.3e-51
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
           MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS
Sbjct: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60

Query: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKV 112
           YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTK+
Sbjct: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]

BLAST of Pay0021783 vs. NCBI nr
Match: KAA0066624.1 (ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 6.3e-51
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
           MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS
Sbjct: 1   MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60

Query: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKV 112
           YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTK+
Sbjct: 61  YSRYCILLFVELQMPLQILRMRTFSSKRELGWKVGIFLRLLSCLNFTDTKI 111

[Close]

BLAST of Pay0021783 vs. NCBI nr
Match: KAA0041123.1 (mucin-3A-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-18
Identity = 58/63 (92.06%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 1  MPTAVSTLILSSTAPSPSSSSSSSSARAQQHCSIPNFVLLPLLPMNLSPLSIQALPRWFS 60
          M TAVSTLILSSTAPSPSS SSSS ARAQQHCSIP FVLLPLL MNLSPLSIQALPRWFS
Sbjct: 1  MLTAVSTLILSSTAPSPSSYSSSSFARAQQHCSIPKFVLLPLLLMNLSPLSIQALPRWFS 60

Query: 61 YSR 64
          YSR
Sbjct: 61 YSR 63

The following BLAST results are available for this feature:

BLAST of Pay0021783 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0021783 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E5B3	8.6e-70	100.00	uncharacterized protein LOC103503176 OS=Cucumis melo OX=3656 GN=LOC103503176 PE=...	[more]
A0A5A7VH19	3.1e-51	99.10	ARM REPEAT PROTEIN INTERACTING WITH ABF2-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7VHJ6	3.1e-51	99.10	ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2 OS=Cucumis melo var. ma...	[more]
A0A5D3CSL1	3.1e-51	99.10	Vacuolar protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G000...	[more]
A0A5A7TD99	1.5e-18	92.06	Mucin-3A-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Pay0021783 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903412.1	1.8e-69	100.00	PREDICTED: uncharacterized protein LOC103503176 [Cucumis melo]	[more]
KAA0064939.1	6.3e-51	99.10	ARM REPEAT PROTEIN INTERACTING WITH ABF2-like isoform X2 [Cucumis melo var. maku...	[more]
TYK14188.1	6.3e-51	99.10	Vacuolar protein 8 [Cucumis melo var. makuwa]	[more]
KAA0066624.1	6.3e-51	99.10	ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cucumis melo var. makuwa]	[more]
KAA0041123.1	3.2e-18	92.06	mucin-3A-like isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0021783 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021783.1	Pay0021783.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane