Pay0021687 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021687
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	E3 ubiquitin-protein ligase COP1-like
Location	chr12: 16739900 .. 16741342 (+)
RNA-Seq Expression	Pay0021687
Synteny	Pay0021687

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTTAATGAGGTCTCTTTTACTTTGATTATCATTTTTTTGTTTCTTGCTTATTATAATCACCACTCTATTCCTGGTATGGATGGATTTAGTCTTTTGATTTTTCTCACTTCTCAATAATCATGATCAGGTGTTTTTCGCTGGTTTCAAAAAAGAAAAGACGACATGAAAAAATAATAAAGAGCAAGCAAACAAAGAAAAGTACTTGATGTCGATGTTGTATGTGCTTTATGCGCACACGAAGTATATATATATACTTCTTCTCTTCTGAGGGTTATGGTTGGCTAACTGTTCTTATTTTGATATGGCTGTTTTTCGCAGTGTGTAAAGATATGTAGACTAGATTACTATACGGAGCTAACTAATTTTGTTTGAGAATTCAAGTAGATTTTTAACTTTTAATCAAGTTTGGAAATGAATTTTTAGAAGAGTACTATTTTGATCTAATGAATAGATTGAGAAGATAAATTATTGATTAATGACTAAGAATTAGTTCGTAGTTCTGACATATACTAATTTGTCAGGGAATCCCTTCCTTTTCATGAAACTTATTTTTTCAATAAAAGTATTTTGACAATTCTTTTAATATTCTTGGACCTTGTCGAGTTTTGTTTTATTTTTCCTTTTGTTTGGCAAATGTTTACTGAGTTTTATTCTCGTTTTGTTTCGGCAACGTTTACAGGGTTATAATTAATTTTAATGGTTGATGCTCTTAATTTCTTGTATATGTCACATGTGCTGCTGCTTCGAGGAATGACATACTTTGGTTATAAAGTATATTCCTCGTACATGGCAGGTGATGGCTAAGTTTAAGCTTAACTGTTATAGAGGGTATTATGTTTTGGGATATATACTGTGATTGAAAGATTTTATAGTTAACGTCCAGTTTTTGGTGTAAATGACGCCAAGCTTTTTCATTTAAATACATGGGATCTTCGCCATTGATTCATTTCAAGAATATATTTTGTTGATTTTGCTTCGCTTTATTTATTTATTTTCTCATTATAGATACAAGCTGATCTTCACTACATTAAGGAAGATATAAGCTCTGTGGAGAAGCAGAGATTGGAACTACATAGGTCTAAAGAAAGGTATTCAGGAAAAATGAAAATGCTGGCCGATGACACTGTATCCACAAAATCACGGTCTTCATTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGTCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAACCCTAGAGCAGATGCGAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTATTGCACAATCTGGACTAACTGTAGCAAATAAAAGGCGGGTTCATACACAG

mRNA sequence

ATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTTAATGAGATACAAGCTGATCTTCACTACATTAAGGAAGATATAAGCTCTGTGGAGAAGCAGAGATTGGAACTACATAGGTCTAAAGAAAGGTATTCAGGAAAAATGAAAATGCTGGCCGATGACACTGTATCCACAAAATCACGGTCTTCATTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGTCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAACCCTAGAGCAGATGCGAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTATTGCACAATCTGGACTAACTGTAGCAAATAAAAGGCGGGTTCATACACAG

Coding sequence (CDS)

ATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTTAATGAGATACAAGCTGATCTTCACTACATTAAGGAAGATATAAGCTCTGTGGAGAAGCAGAGATTGGAACTACATAGGTCTAAAGAAAGGTATTCAGGAAAAATGAAAATGCTGGCCGATGACACTGTATCCACAAAATCACGGTCTTCATTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGTCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAACCCTAGAGCAGATGCGAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTATTGCACAATCTGGACTAACTGTAGCAAATAAAAGGCGGGTTCATACACAG

Protein sequence

MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQ

Homology

[Close]

BLAST of Pay0021687 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.8e-30
Identity = 79/151 (52.32%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAE NMQILL FL+CLRKQK++EL E+Q DL +IKEDI +VEK R++L+R+++RYS
Sbjct: 150 MEQEEAERNMQILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYS 209

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGP- 120
            K++ML DD+   KSR S +D + +G+ S     +G +SSG S   + D K Q+SS G  
Sbjct: 210 VKLRML-DDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSG-SHTKKNDGKSQISSHGHG 269

Query: 121 -LRKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
             R+D    SD   I QSGL +  K+RVHTQ
Sbjct: 270 IQRRDPITGSDSQYINQSGLALVRKKRVHTQ 298

[Close]

BLAST of Pay0021687 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 73/149 (48.99%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAE NMQILL FL+CLRKQK++ELNE+Q DL YIKEDI++VE+ R++L+R+++RYS
Sbjct: 155 MEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYS 214

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
            K++ML DD  +  +     +K+  G NS     +G    GN  N + + K Q SS G  
Sbjct: 215 VKLRMLGDDPSTRNAWPH--EKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLP 274

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           +KDA   SD  S+ QS +++A K+R+H Q
Sbjct: 275 KKDALSGSDSQSLNQSTVSMARKKRIHAQ 301

[Close]

BLAST of Pay0021687 vs. ExPASy TrEMBL
Match: A0A5A7TIH5 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00010 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS
Sbjct: 185 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 244

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL
Sbjct: 245 GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 304

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHSIAQSGLTVANKRRVHTQ
Sbjct: 305 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 333

[Close]

BLAST of Pay0021687 vs. ExPASy TrEMBL
Match: A0A5D3CLL8 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00900 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS
Sbjct: 215 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 274

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL
Sbjct: 275 GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 334

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHSIAQSGLTVANKRRVHTQ
Sbjct: 335 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 363

[Close]

BLAST of Pay0021687 vs. ExPASy TrEMBL
Match: A0A1S3C954 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS
Sbjct: 185 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 244

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL
Sbjct: 245 GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 304

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHSIAQSGLTVANKRRVHTQ
Sbjct: 305 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 333

[Close]

BLAST of Pay0021687 vs. ExPASy TrEMBL
Match: A0A0A0LYH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYS
Sbjct: 188 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYS 247

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSGNSPNPRADAKIQLSSQGPL
Sbjct: 248 GKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPL 307

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHS+AQSGLTVANKRRVHTQ
Sbjct: 308 RKDAYCSSDLHSVAQSGLTVANKRRVHTQ 336

[Close]

BLAST of Pay0021687 vs. ExPASy TrEMBL
Match: A0A6J1CL47 (E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC111012608 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69
Identity = 139/149 (93.29%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYS
Sbjct: 173 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYS 232

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKML DDTVSTKSRSSLIDKHGNGIN G QRSQGWMSSGNS NPRAD KIQL SQGPL
Sbjct: 233 GKMKMLVDDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSGNSANPRADVKIQLGSQGPL 292

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYC SDLHS+AQSGL VANKRRVHTQ
Sbjct: 293 RKDAYCGSDLHSVAQSGLAVANKRRVHTQ 321

[Close]

BLAST of Pay0021687 vs. NCBI nr
Match: XP_008458987.1 (PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 288.5 bits (737), Expect = 3.3e-74
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS
Sbjct: 185 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 244

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL
Sbjct: 245 GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 304

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHSIAQSGLTVANKRRVHTQ
Sbjct: 305 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 333

[Close]

BLAST of Pay0021687 vs. NCBI nr
Match: TYK12320.1 (E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 288.5 bits (737), Expect = 3.3e-74
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS
Sbjct: 215 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 274

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL
Sbjct: 275 GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 334

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHSIAQSGLTVANKRRVHTQ
Sbjct: 335 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 363

[Close]

BLAST of Pay0021687 vs. NCBI nr
Match: XP_031735991.1 (E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 6.2e-73
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYS
Sbjct: 138 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYS 197

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSGNSPNPRADAKIQLSSQGPL
Sbjct: 198 GKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPL 257

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHS+AQSGLTVANKRRVHTQ
Sbjct: 258 RKDAYCSSDLHSVAQSGLTVANKRRVHTQ 286

[Close]

BLAST of Pay0021687 vs. NCBI nr
Match: XP_004145465.3 (E3 ubiquitin-protein ligase COP1 isoform X1 [Cucumis sativus] >KAE8653640.1 hypothetical protein Csa_007625 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 6.2e-73
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYS
Sbjct: 142 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYS 201

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSGNSPNPRADAKIQLSSQGPL
Sbjct: 202 GKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPL 261

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHS+AQSGLTVANKRRVHTQ
Sbjct: 262 RKDAYCSSDLHSVAQSGLTVANKRRVHTQ 290

[Close]

BLAST of Pay0021687 vs. NCBI nr
Match: XP_038894733.1 (E3 ubiquitin-protein ligase COP1-like [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 2.4e-72
Identity = 144/149 (96.64%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYS
Sbjct: 180 MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYS 239

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
           GKMKMLADDT+STKSRSSLIDKHGNGINSG QRSQGW+SSGNSPNPRADAKIQLSSQGPL
Sbjct: 240 GKMKMLADDTISTKSRSSLIDKHGNGINSGAQRSQGWVSSGNSPNPRADAKIQLSSQGPL 299

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           RKDAYCSSDLHS+AQSGLTVANKRRVHTQ
Sbjct: 300 RKDAYCSSDLHSVAQSGLTVANKRRVHTQ 328

[Close]

BLAST of Pay0021687 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 73/149 (48.99%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 1   MEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYS 60
           MEQEEAE NMQILL FL+CLRKQK++ELNE+Q DL YIKEDI++VE+ R++L+R+++RYS
Sbjct: 155 MEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYS 214

Query: 61  GKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPL 120
            K++ML DD  +  +     +K+  G NS     +G    GN  N + + K Q SS G  
Sbjct: 215 VKLRMLGDDPSTRNAWPH--EKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLP 274

Query: 121 RKDAYCSSDLHSIAQSGLTVANKRRVHTQ 150
           +KDA   SD  S+ QS +++A K+R+H Q
Sbjct: 275 KKDALSGSDSQSLNQSTVSMARKKRIHAQ 301

The following BLAST results are available for this feature:

BLAST of Pay0021687 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93471	1.8e-30	52.32	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]
P43254	1.5e-29	48.99	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]

BLAST of Pay0021687 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIH5	1.6e-74	100.00	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3CLL8	1.6e-74	100.00	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C954	1.6e-74	100.00	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE...	[more]
A0A0A0LYH0	3.0e-73	97.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1	[more]
A0A6J1CL47	2.6e-69	93.29	E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

BLAST of Pay0021687 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458987.1	3.3e-74	100.00	PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3...	[more]
TYK12320.1	3.3e-74	100.00	E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa]	[more]
XP_031735991.1	6.2e-73	97.99	E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus]	[more]
XP_004145465.3	6.2e-73	97.99	E3 ubiquitin-protein ligase COP1 isoform X1 [Cucumis sativus] >KAE8653640.1 hypo...	[more]
XP_038894733.1	2.4e-72	96.64	E3 ubiquitin-protein ligase COP1-like [Benincasa hispida]	[more]

BLAST of Pay0021687 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32950.1	1.1e-30	48.99	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..112
None	No IPR available	PANTHER	PTHR44080:SF2	E3 UBIQUITIN-PROTEIN LIGASE COP1	coord: 1..149
IPR042755	E3 ubiquitin-protein ligase COP1	PANTHER	PTHR44080	E3 UBIQUITIN-PROTEIN LIGASE COP1	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021687.1	Pay0021687.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity