Pay0021649 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021649
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	trafficking protein particle complex subunit 6B
Location	chr02: 1109768 .. 1113351 (-)
RNA-Seq Expression	Pay0021649
Synteny	Pay0021649

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAATGTGAAAATTTCGATTTTACGACATGTCGTCCTTTAGTAGTTGAATCTAGACTGAGGGCGGAATCAAGGCAGTGACTCGATCGATCTTCTCTCATTCTCCATCTTGTTCTTGATTTCCTTCCCAATTCTATCGAAGTGAGCTTCTTCAGCTTTCTACAATTCCACTTTGGTCGAAGGTAAAAACACATGGGGAGAGAGGTAGCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGCCGCCCGTCGGATCGAGGCAATTGGTTATCAGGTTGGCCATCAGCTCTCCGAACGGTATTCCTTCAACCCCACTTTCTACCCATCTTTTTTTGTTGCTTAGATTTTGATTTCCAATGTTGGCTAATGGATCTCTGATTCAGTTTCCTAATTCTTTCATACTTTTTTCTGTTTTACTGAATGTATATGTTGGGAGATTTATATTTGAGCTTGGGAAGAACAATAGTTGGGACTAGAATTGAGGGTTAGAAGTGTTTCACCAACACCCCACCACATAGGAAAAGGAATTTTGTGTAATTGAAAACATCTATTCTATAATGAAAGCAGGAGGACAAAAAGTTGAATTTTTCAGGATAATAAAATCATATATTGACATGGACTAGTTTTTGGGATATGACAGATACTCCATAACCAAAACAGTATACATGACAATGGCTAGGCTCTAGAGTTACTTCTGATCATCGTTTGCAGTGCTTAGACGGCCATTTTGAAATGGGTTCTAACCCCCCCTTCAGATTTGAGAATATGTGCATTTTTCGTCCCTCTTTTAGAGCCTAGCTTATTTTACCCTTCTAATGTGCCGCAGAGGTAGAGGTCTTAGGAAAATGGGAAGGTTATTGTTTTTGGGTAAGCCTCACAGTTTGAGAGAGTCCCTTAATTCGAAATCGTGAAGTTTTTGGAGACTTGAAAATCAAGAAACTAGATTAACTAAATTGTAATACCATGATGGGTTGATTGGAAGAGGTGCTTTGAACAGAGAGAGGGAAGGTTATCTCTGAAAGTTGAGTTTGAAGAGGTGATTAATTGTGAAACTATCTGCTGGAGGCAAAACGCTAAATGTACATAGGCTTTGGAGGGTAACAACACTGCTTACCTCCATAGGGTTGACCACACAGAAAGTAATTGTTTTCATAAATTAGTAAAAAAGAAATAGAAAGAGAAAAACCCACTGGTCTGCAAAGATGGGAAACTATACGATAAGGAGACTGAAACGGGAGTTCTCTCTTTTTTATCTTCTCTTCATGGTTTGACTGTGGATTATCTCACCTAAGCCTTTCCTTGAGGGGCTCTCCCATCTCAAATGAACCCCAGCCTGATGGTTTCACTATGGCGTTTTTCTAGATAACTGGGGCTTATGATCTTTGGAAAGTGACTTTTGAGTTATATAAGCGAGGAGTGGTGGATAAGTCAATGAACAAAACTTTTTTCTCCTGTTTCCTAAGAAGGAAGAAATGTGAAGGATCTAGGAGTTTAGACCCAAGAAATGTGAAGGTTTAGAAGTTTAGACCCATGAGCATTCTCGCTTGGGTATATAAAATTCTAGCACACTATTGCATTGTTATTAACTAGATATGTCTTCAATAAATGTATGACTCCTATTGTTCAAAAGGATGAAATTGATTGGTTGATTCAAGTGATGTTGCAGGGGTCTGGGATTGAACAATTGTGTACTAGATTGTTTTCAAGCCTATTTTATTGATTCAGAGAATACTTACGTTTGTTGTTGGTTATAAGCTTTAAATTGCGTAATGATTTCGAACAAATATCTCATTTGAGTAGTAGATGAGTTGCTAGATGAACTGTATGCTGGCAATATCTTTTCCAAAACCAAGAAGTGTACCCCGATTAAGCTCTTACTAGAGGATATCCATAGTAATGCCGTGAAGGTTGAGTTAATATTCCCTTAACTTTGCAGTCTGTAATGGATAATGTCATTTGGCCCTTCTTACACGTTGTCTTGTTCTGGTTTATAGTGTCAAGTTGAAGGATCATTTGAGCTTCTTGCAGTAGTCTTCAGTGCTTCGGGACCATCAGTTAGTTACTAAAAAGTGTCAGCTTGCATTATCCCACGTCCTGTAGTTAGCCATGTAGTGCTAGCTTAACCATTGAAGTTGCTTCTAATCCTTTATACAATTGCTGCAAAGGACCAATGGTATGTACCCCAATAGTTTGGAGTTATGTGGGTTCTAGGCCAGTATGATAACTATCAAATCTTTTGTCAATTGTGAAATTGGGGGTGGCCACGGGTGTAATGTTAATGCAAGAATCTTACCCGACAAGAGGTATATGGTATGTGGTATACTAGATGTGAAGATGAAAGGAGGGGTGTGCAGGAACTCTCTAATCTTTCCCCAGAGACGTTTGTTTCCCTGTTTAGCTAGTAAAATATTCTGCTGGGAGTCTCAATACATTATGACTTAGCTTCCATTTCCATTCCCGTTTTATGGCTTCTTATTCATGGTACTTGACAACTAAATACTGCAACTTTACTGTTAAGCTTTGTTTTCAGGTATACGATGGAGCGGCCTCGGTTCACTGATCATCTTGAAGCAATCAAATTTATCTGCAAGGACTTCTGGTCTGAACTCTTCAAAAAGCAAATAGACAACTTGAAAACAAATCATAGAGTAAGATCAGAAGTCAAACCTAGAAGCAGCCGTTCTTTTTCTTGTGTACTGTGCTTGATCCTTCATGAACTTGACCTAAATATGGAAATTTGTTTTGATTCTCAGGGCACCTTTGTCTTGCAAGATAATCGATTCCGCTGGCTTACTCGCATGTCGGTGGATCCTCAAAATGAATCACAAGATAATTCTGCAGATGGTGAAAACAAGGCAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATTAGAGGTGCTCTTTCAAATTTGGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTAAGTAATCAAACTTCAATCATAATCCCCACTTTGCTTCTTTGTTCCAGAACTGAGAAAATGACCTGTTGAAACCACTTTGTTTTATGAAATAGGTTCATTTGTTGTTCGTATAAAGGCCTGATGAGAAGTGTATCAAAAAGTAGAGATTTTATCTTTGGGATATGAAGACATGATAGATCCTTAACACCACTCTCCAGTTGCAATCCTTTCTGTCCTGTTTCCTTTTTTGCTTTCTCTATTCCTCTATCTTCTCCTAGTTCATGAAACTCTTAGCACAAAAATCTGTTGGACAAACGTTTGTGTATGTATGAAAGTCAATAGCGATTTCTTTTCAGAATTTCATGACTGTAGAGATAGTTGAGGTTTATTTTATATTTTACCATTTGGGAGGATTGATTCATATGCTATGAATCTGTAATGATCACCTATCTGGATTGTTAAGGTTCTATGGGTTTCGAGATGATTAAAATATTGTAGGGTTGATCATTCATGAGATTGTTGTAGACATGTGTAAACCTATCTAAACAGTTATGGAGACAAAAAAAAAATTACTTTTTATTTTTT

mRNA sequence

GAAAAATGTGAAAATTTCGATTTTACGACATGTCGTCCTTTAGTAGTTGAATCTAGACTGAGGGCGGAATCAAGGCAGTGACTCGATCGATCTTCTCTCATTCTCCATCTTGTTCTTGATTTCCTTCCCAATTCTATCGAAGTGAGCTTCTTCAGCTTTCTACAATTCCACTTTGGTCGAAGGTAAAAACACATGGGGAGAGAGGTAGCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGCCGCCCGTCGGATCGAGGCAATTGGTTATCAGGTTGGCCATCAGCTCTCCGAACGCTTTGTTTTCAGGTATACGATGGAGCGGCCTCGGTTCACTGATCATCTTGAAGCAATCAAATTTATCTGCAAGGACTTCTGGTCTGAACTCTTCAAAAAGCAAATAGACAACTTGAAAACAAATCATAGAGGCACCTTTGTCTTGCAAGATAATCGATTCCGCTGGCTTACTCGCATGTCGGTGGATCCTCAAAATGAATCACAAGATAATTCTGCAGATGGTGAAAACAAGGCAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATTAGAGGTGCTCTTTCAAATTTGGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTTCATTTGTTGTTCGTATAAAGGCCTGATGAGAAGTGTATCAAAAAGTAGAGATTTTATCTTTGGGATATGAAGACATGATAGATCCTTAACACCACTCTCCAGTTGCAATCCTTTCTGTCCTGTTTCCTTTTTTGCTTTCTCTATTCCTCTATCTTCTCCTAGTTCATGAAACTCTTAGCACAAAAATCTGTTGGACAAACGTTTGTGTATGTATGAAAGTCAATAGCGATTTCTTTTCAGAATTTCATGACTGTAGAGATAGTTGAGGTTTATTTTATATTTTACCATTTGGGAGGATTGATTCATATGCTATGAATCTGTAATGATCACCTATCTGGATTGTTAAGGTTCTATGGGTTTCGAGATGATTAAAATATTGTAGGGTTGATCATTCATGAGATTGTTGTAGACATGTGTAAACCTATCTAAACAGTTATGGAGACAAAAAAAAAATTACTTTTTATTTTTT

Coding sequence (CDS)

ATGGGGAGAGAGGTAGCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGCCGCCCGTCGGATCGAGGCAATTGGTTATCAGGTTGGCCATCAGCTCTCCGAACGCTTTGTTTTCAGGTATACGATGGAGCGGCCTCGGTTCACTGATCATCTTGAAGCAATCAAATTTATCTGCAAGGACTTCTGGTCTGAACTCTTCAAAAAGCAAATAGACAACTTGAAAACAAATCATAGAGGCACCTTTGTCTTGCAAGATAATCGATTCCGCTGGCTTACTCGCATGTCGGTGGATCCTCAAAATGAATCACAAGATAATTCTGCAGATGGTGAAAACAAGGCAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATTAGAGGTGCTCTTTCAAATTTGGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTTCATTTGTTGTTCGTATAAAGGCCTGA

Protein sequence

MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

Homology

[Close]

BLAST of Pay0021649 vs. ExPASy Swiss-Prot
Match: Q32L78 (Trafficking protein particle complex subunit 6B OS=Bos taurus OX=9913 GN=TRAPPC6B PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-30
Identity = 68/139 (48.92%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 36  RIEAIGYQVGHQLSERFVFRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRG 95
           ++E +G++VG  L ERF    T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G
Sbjct: 35  KLENMGFRVGQGLIERF----TKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQG 94

Query: 96  TFVLQDNRFRWLTRMSVDPQNESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPC 155
            +VLQDN+FR LT+MS   Q               +  S +L F CG+IRG LSNLGI  
Sbjct: 95  IYVLQDNKFRLLTQMSAGKQ-------------YLEHASKYLAFTCGLIRGGLSNLGIKS 154

Query: 156 AVSADISNLPACSFVVRIK 175
            V+A++S++PAC F V I+
Sbjct: 155 IVTAEVSSMPACKFQVMIQ 156

[Close]

BLAST of Pay0021649 vs. ExPASy Swiss-Prot
Match: Q86SZ2 (Trafficking protein particle complex subunit 6B OS=Homo sapiens OX=9606 GN=TRAPPC6B PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-30
Identity = 68/139 (48.92%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 36  RIEAIGYQVGHQLSERFVFRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRG 95
           ++E +G++VG  L ERF    T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G
Sbjct: 35  KLENMGFRVGQGLIERF----TKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQG 94

Query: 96  TFVLQDNRFRWLTRMSVDPQNESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPC 155
            +VLQDN+FR LT+MS   Q               +  S +L F CG+IRG LSNLGI  
Sbjct: 95  IYVLQDNKFRLLTQMSAGKQ-------------YLEHASKYLAFTCGLIRGGLSNLGIKS 154

Query: 156 AVSADISNLPACSFVVRIK 175
            V+A++S++PAC F V I+
Sbjct: 155 IVTAEVSSMPACKFQVMIQ 156

[Close]

BLAST of Pay0021649 vs. ExPASy Swiss-Prot
Match: F1QMV3 (Trafficking protein particle complex subunit 6b OS=Danio rerio OX=7955 GN=trappc6b PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-29
Identity = 65/139 (46.76%), Postives = 91/139 (65.47%), Query Frame = 0


Query: 36  RIEAIGYQVGHQLSERFVFRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRG 95
           ++E +G++VG  L ERF    T + PRF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G
Sbjct: 34  KLENMGFRVGQGLIERF----TKDTPRFKDELDVMKFICKDFWTSVFKKQIDNLRTNHQG 93

Query: 96  TFVLQDNRFRWLTRMSVDPQNESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPC 155
            +VLQDN+FR LT++S   Q               +     L F CG++RGALSN+G+  
Sbjct: 94  IYVLQDNKFRLLTQLSAGKQ-------------YLEHAPKFLAFTCGLVRGALSNIGVKS 153

Query: 156 AVSADISNLPACSFVVRIK 175
            V+A++S +PAC F V I+
Sbjct: 154 IVTAEVSVMPACKFQVMIQ 155

[Close]

BLAST of Pay0021649 vs. ExPASy Swiss-Prot
Match: Q9D289 (Trafficking protein particle complex subunit 6B OS=Mus musculus OX=10090 GN=Trappc6b PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 66/139 (47.48%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 36  RIEAIGYQVGHQLSERFVFRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRG 95
           ++E++G++VG  L ERF    T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G
Sbjct: 35  KLESMGFRVGQGLIERF----TKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQG 94

Query: 96  TFVLQDNRFRWLTRMSVDPQNESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPC 155
            +VLQDN+FR L ++S   Q               +  S +L F CG+IRG LSNLGI  
Sbjct: 95  IYVLQDNKFRLLIQLSAGKQ-------------YLEHASKYLAFTCGLIRGGLSNLGIKS 154

Query: 156 AVSADISNLPACSFVVRIK 175
            V+A++S++PAC F V I+
Sbjct: 155 IVTAEVSSMPACKFQVMIQ 156

[Close]

BLAST of Pay0021649 vs. ExPASy Swiss-Prot
Match: Q78XR0 (Trafficking protein particle complex subunit 6A OS=Mus musculus OX=10090 GN=Trappc6a PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-22
Identity = 54/138 (39.13%), Postives = 79/138 (57.25%), Query Frame = 0


Query: 37  IEAIGYQVGHQLSERFVFRYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGT 96
           +E +G++VG  L ER      +E P F + L+A+KF+C+D W+ +F+K +D L+TNH+GT
Sbjct: 37  LEGLGFRVGQALGERL----PLETPAFREELDALKFLCRDLWAAMFQKHMDGLRTNHQGT 96

Query: 97  FVLQDNRFRWLTRMSVDPQNESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCA 156
           +VLQDN F  L  M   PQ               +     L F CG++ GAL  LG    
Sbjct: 97  YVLQDNSFPLLVTMGSGPQ-------------YLEEAPKFLAFTCGLLCGALHTLGFQSL 156

Query: 157 VSADISNLPACSFVVRIK 175
           V+A +++LPAC F V I+
Sbjct: 157 VTASVASLPACKFQVVIQ 157

[Close]

BLAST of Pay0021649 vs. ExPASy TrEMBL
Match: A0A1S3BQW9 (trafficking protein particle complex subunit 6B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492220 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.0e-96
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120

Query: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 175

[Close]

BLAST of Pay0021649 vs. ExPASy TrEMBL
Match: A0A5D3CG65 (Trafficking protein particle complex subunit 6B isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003390 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.4e-92
Identity = 171/175 (97.71%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMER
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120

Query: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 171

[Close]

BLAST of Pay0021649 vs. ExPASy TrEMBL
Match: A0A1S3BP90 (trafficking protein particle complex subunit 6B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492220 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.4e-92
Identity = 171/175 (97.71%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMER
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120

Query: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 171

[Close]

BLAST of Pay0021649 vs. ExPASy TrEMBL
Match: A0A0A0M1M8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573010 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 9.9e-92
Identity = 170/175 (97.14%), Postives = 170/175 (97.14%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMER
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120

Query: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           NSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 NSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 171

[Close]

BLAST of Pay0021649 vs. ExPASy TrEMBL
Match: A0A6J1I0Q5 (trafficking protein particle complex subunit 6B OS=Cucurbita maxima OX=3661 GN=LOC111467932 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88
Identity = 167/175 (95.43%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREV+ESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSE    RYTMER
Sbjct: 1   MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSE----RYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVD-PQNESQ 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVD PQ ESQ
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQGESQ 120

Query: 121 DNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK 175
           DNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Sbjct: 121 DNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK 171

[Close]

BLAST of Pay0021649 vs. NCBI nr
Match: XP_008450727.1 (PREDICTED: trafficking protein particle complex subunit 6B isoform X1 [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 6.1e-96
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120

Query: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 175

[Close]

BLAST of Pay0021649 vs. NCBI nr
Match: XP_031736214.1 (trafficking protein particle complex subunit 6B isoform X1 [Cucumis sativus] >KAE8653391.1 hypothetical protein Csa_007534 [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 4.4e-94
Identity = 174/176 (98.86%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVF-RYTME 60
           MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVF RYTME
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFTRYTME 60

Query: 61  RPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQ 120
           RPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQ
Sbjct: 61  RPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQ 120

Query: 121 DNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           DNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 DNSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176

[Close]

BLAST of Pay0021649 vs. NCBI nr
Match: XP_008450728.1 (PREDICTED: trafficking protein particle complex subunit 6B isoform X2 [Cucumis melo] >TYK10194.1 trafficking protein particle complex subunit 6B isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 347.4 bits (890), Expect = 7.0e-92
Identity = 171/175 (97.71%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMER
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120

Query: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 171

[Close]

BLAST of Pay0021649 vs. NCBI nr
Match: XP_004135644.1 (trafficking protein particle complex subunit 6B isoform X2 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 2.0e-91
Identity = 170/175 (97.14%), Postives = 170/175 (97.14%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMER
Sbjct: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120

Query: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           NSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 NSADGENKVAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 171

[Close]

BLAST of Pay0021649 vs. NCBI nr
Match: XP_038878648.1 (trafficking protein particle complex subunit 6B [Benincasa hispida])

HSP 1 Score: 344.4 bits (882), Expect = 5.9e-91
Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMER
Sbjct: 1   MGREVSESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQNESQD 120
           PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQ+ESQD
Sbjct: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQD 120

Query: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 NSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 171

[Close]

BLAST of Pay0021649 vs. TAIR 10
Match: AT3G05000.1 (Transport protein particle (TRAPP) component )

HSP 1 Score: 298.1 bits (762), Expect = 4.5e-81
Identity = 145/177 (81.92%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERFVFRYTMER 60
           MGREVAESCVD++L EMV+ Y  RFYANKPELAARRIEAIGYQVGHQLSE    RYTMER
Sbjct: 1   MGREVAESCVDTMLMEMVAMYSGRFYANKPELAARRIEAIGYQVGHQLSE----RYTMER 60

Query: 61  PRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDP--QNES 120
           PRF+DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+FRWL+R+S+DP  +NE+
Sbjct: 61  PRFSDHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSIDPSSENET 120

Query: 121 QDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176
           QD S  GE+KAAQA SM+LYFPCGIIRG LSNLGIPCAVSADIS+LP CSFV+R+KA
Sbjct: 121 QDPSTPGESKAAQAVSMYLYFPCGIIRGVLSNLGIPCAVSADISSLPTCSFVIRVKA 173

The following BLAST results are available for this feature:

BLAST of Pay0021649 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32L78	2.7e-30	48.92	Trafficking protein particle complex subunit 6B OS=Bos taurus OX=9913 GN=TRAPPC6...	[more]
Q86SZ2	2.7e-30	48.92	Trafficking protein particle complex subunit 6B OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
F1QMV3	1.0e-29	46.76	Trafficking protein particle complex subunit 6b OS=Danio rerio OX=7955 GN=trappc...	[more]
Q9D289	1.4e-29	47.48	Trafficking protein particle complex subunit 6B OS=Mus musculus OX=10090 GN=Trap...	[more]
Q78XR0	1.6e-22	39.13	Trafficking protein particle complex subunit 6A OS=Mus musculus OX=10090 GN=Trap...	[more]

BLAST of Pay0021649 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQW9	3.0e-96	100.00	trafficking protein particle complex subunit 6B isoform X1 OS=Cucumis melo OX=36...	[more]
A0A5D3CG65	3.4e-92	97.71	Trafficking protein particle complex subunit 6B isoform X2 OS=Cucumis melo var. ...	[more]
A0A1S3BP90	3.4e-92	97.71	trafficking protein particle complex subunit 6B isoform X2 OS=Cucumis melo OX=36...	[more]
A0A0A0M1M8	9.9e-92	97.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573010 PE=3 SV=1	[more]
A0A6J1I0Q5	1.7e-88	95.43	trafficking protein particle complex subunit 6B OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Pay0021649 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450727.1	6.1e-96	100.00	PREDICTED: trafficking protein particle complex subunit 6B isoform X1 [Cucumis m...	[more]
XP_031736214.1	4.4e-94	98.86	trafficking protein particle complex subunit 6B isoform X1 [Cucumis sativus] >KA...	[more]
XP_008450728.1	7.0e-92	97.71	PREDICTED: trafficking protein particle complex subunit 6B isoform X2 [Cucumis m...	[more]
XP_004135644.1	2.0e-91	97.14	trafficking protein particle complex subunit 6B isoform X2 [Cucumis sativus]	[more]
XP_038878648.1	5.9e-91	96.57	trafficking protein particle complex subunit 6B [Benincasa hispida]	[more]

BLAST of Pay0021649 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05000.1	4.5e-81	81.92	Transport protein particle (TRAPP) component	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1380.20	Trafficking protein particle complex subunit 3	coord: 5..175 e-value: 2.9E-59 score: 201.2
None	No IPR available	PANTHER	PTHR12817:SF6	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6A-RELATED	coord: 1..174
IPR007194	Transport protein particle (TRAPP) component	PFAM	PF04051	TRAPP	coord: 11..173 e-value: 5.2E-48 score: 162.6
IPR037992	TRAPP complex, Trs33 subunit	PANTHER	PTHR12817	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B	coord: 1..174
IPR037992	TRAPP complex, Trs33 subunit	CDD	cd14944	TRAPPC6A_Trs33	coord: 6..174 e-value: 6.88626E-81 score: 235.226
IPR024096	NO signalling/Golgi transport ligand-binding domain superfamily	SUPERFAMILY	111126	Ligand-binding domain in the NO signalling and Golgi transport	coord: 4..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021649.2	Pay0021649.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0043087	regulation of GTPase activity
biological_process	GO:0048193	Golgi vesicle transport
cellular_component	GO:0005801	cis-Golgi network
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0030008	TRAPP complex