Pay0021630 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021630
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr02: 13135637 .. 13136730 (+)
RNA-Seq Expression	Pay0021630
Synteny	Pay0021630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCAATTCAGCGCTTCTTACTTCCGCTTGCCCTAATTTCTCTTCTCCTTTTCTCTGAATCTCTCGCAGCCATCTCCTCTACCGATCATGGCCAGAATTCTAATCGGCGAGGGGACAAGGGTTCCGACACCTCCTTGGCCGGAAAGATCATTAGTAAAAGAGGAGTTCGGTCCGGCGTAACTGCAGGTCGTTCGACTTCGTCGTCGTCCGCCCAAATGTCGTCGTCGTTCTTTAATGTCGGCTCTTTGATTTGTTTCAACATAGCGTTTGTGTTTGCGATGTTCTTGTGAATTTTTGACTCTTATACGATGCTCCATTCAATTCATTTAATTTTTGTTACACAAACTTAAAGCTCGTTGGGATCAAATTGCAAAAACAATCGATCGTGTTCATGCAAATTGTTTGTTTGATTTGAGCCGTTCAATTTTATATATAGTATTAATAGGTCGATTTGATTTAGCATTTGATTCACAAATCAAAAACCAAACTGCACCAAAAGAATTCATATCCATGGCTGATCTTATATGGTTGTGAATGGATTATACAAATTTGAACGAAAAAAGAAAAAAGCTTCAAATTCAAACCCTTCTAATATTAGTCTCCTCCTTTTTATGTTTCTCCTTTCCTTCTTCTTTCAATGGATTTCCCATTCCCGTTCTCATTCCCTCATAAATTCATATCCATGGCTGATCCTAAACCCCTCCATGTTCTCTTAATAATGGCGCCTCTTCTTCTTCTTCTGGCCTCACAACTCAACTCGATCTTCGCTCAAACAGATTCACCAACTCCTCCCAATCTTCCCCAACAAACAATCAACAAAGAACGCCTCCCTTCCTCCGATCCACATCTTTCTCCACCTCTTAGCAACCAAAGAGCAGCTCGAAACAATACCAAAGCGCATCGTCGTGATCAACTCGCCGATACTAGACTCTCTCTCAAACGCTTGAGATCTAATCGTGATTCGATTCGGAAACGTCGAAGACGCAATCACCTACGTGCTTGGCATCGCAGCTATTCCTCCCGTGGTTGTCTTCCGACGGTTTCTTTGTTGTACATTTGGTTCGGAATTCTTTGGTCCATTTCTGCATAA

mRNA sequence

ATGGCCGCAATTCAGCGCTTCTTACTTCCGCTTGCCCTAATTTCTCTTCTCCTTTTCTCTGAATCTCTCGCAGCCATCTCCTCTACCGATCATGGCCAGAATTCTAATCGGCGAGGGGACAAGGGTTCCGACACCTCCTTGGCCGGAAAGATCATTAGTAAAAGAGGAGTTCGGTCCGGCGTAACTGCAGATTCACCAACTCCTCCCAATCTTCCCCAACAAACAATCAACAAAGAACGCCTCCCTTCCTCCGATCCACATCTTTCTCCACCTCTTAGCAACCAAAGAGCAGCTCGAAACAATACCAAAGCGCATCGTCGTGATCAACTCGCCGATACTAGACTCTCTCTCAAACGCTTGAGATCTAATCGTGATTCGATTCGGAAACGTCGAAGACGCAATCACCTACGTGCTTGGCATCGCAGCTATTCCTCCCGTGGTTGTCTTCCGACGGTTTCTTTGTTGTACATTTGGTTCGGAATTCTTTGGTCCATTTCTGCATAA

Coding sequence (CDS)

ATGGCCGCAATTCAGCGCTTCTTACTTCCGCTTGCCCTAATTTCTCTTCTCCTTTTCTCTGAATCTCTCGCAGCCATCTCCTCTACCGATCATGGCCAGAATTCTAATCGGCGAGGGGACAAGGGTTCCGACACCTCCTTGGCCGGAAAGATCATTAGTAAAAGAGGAGTTCGGTCCGGCGTAACTGCAGATTCACCAACTCCTCCCAATCTTCCCCAACAAACAATCAACAAAGAACGCCTCCCTTCCTCCGATCCACATCTTTCTCCACCTCTTAGCAACCAAAGAGCAGCTCGAAACAATACCAAAGCGCATCGTCGTGATCAACTCGCCGATACTAGACTCTCTCTCAAACGCTTGAGATCTAATCGTGATTCGATTCGGAAACGTCGAAGACGCAATCACCTACGTGCTTGGCATCGCAGCTATTCCTCCCGTGGTTGTCTTCCGACGGTTTCTTTGTTGTACATTTGGTTCGGAATTCTTTGGTCCATTTCTGCATAA

Protein sequence

MAAIQRFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSGVTADSPTPPNLPQQTINKERLPSSDPHLSPPLSNQRAARNNTKAHRRDQLADTRLSLKRLRSNRDSIRKRRRRNHLRAWHRSYSSRGCLPTVSLLYIWFGILWSISA

Homology

[Close]

BLAST of Pay0021630 vs. ExPASy TrEMBL
Match: A0A5D3BAD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00490 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-48
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 64  DSPTPPNLPQQTINKERLPSSDPHLSPPLSNQRAARNNTKAHRRDQLADTRLSLKRLRSN 123
           DSPTPPNLPQQTINKERLPSSDPHLSPPLSNQRAARNNTKAHRRDQLA TRLSLKRLRSN
Sbjct: 47  DSPTPPNLPQQTINKERLPSSDPHLSPPLSNQRAARNNTKAHRRDQLAGTRLSLKRLRSN 106

Query: 124 RDSIRKRRRRNHLRAWHRSYSSRGCLPTVSLLYIWFGILWSISA 168
           RDSIRKRRRRNHLRAWHRSYSSRGCLPTVSLLYIWFGILWSISA
Sbjct: 107 RDSIRKRRRRNHLRAWHRSYSSRGCLPTVSLLYIWFGILWSISA 150

[Close]

BLAST of Pay0021630 vs. ExPASy TrEMBL
Match: A0A0A0LTC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257320 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.9e-29
Identity = 81/105 (77.14%), Postives = 87/105 (82.86%), Query Frame = 0


Query: 64  DSPTPPNLPQQTIN-KERLPSSDPHLSPPLSNQRAARNN-TKAHRRDQLADTRLSLKRLR 123
           DS TP NLPQQT N +E LPSSDPHLSPPLSNQRAARNN TKAH   +LA T++SLKRLR
Sbjct: 31  DSSTPSNLPQQTTNEEEHLPSSDPHLSPPLSNQRAARNNKTKAHPH-ELAGTKISLKRLR 90

Query: 124 SNRDSIRKRRRRNHLRAW-HRSYSSRGCLPTVSLLYIWFGILWSI 166
           S+RDSIRKRRRRNH RAW  R+YSS GC  TVSL YIWFGI WSI
Sbjct: 91  SSRDSIRKRRRRNHQRAWRRRNYSSHGCRLTVSLSYIWFGIFWSI 134

[Close]

BLAST of Pay0021630 vs. ExPASy TrEMBL
Match: A0A5D3BCG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00480 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.3e-21
Identity = 64/75 (85.33%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1  MAAIQRFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSG 60
          MAAI RFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSG
Sbjct: 1  MAAIHRFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSG 60

Query: 61 VTADSPTPPNLPQQT 76
          VTA   T  +  Q +
Sbjct: 61 VTAGRSTSSSSAQMS 75

[Close]

BLAST of Pay0021630 vs. ExPASy TrEMBL
Match: A0A0A0LYV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257330 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.3e-12
Identity = 49/66 (74.24%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 2  AAIQRFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSGV 61
          AAI RFLLP+ALISLLLFSESL AISS+DH Q+SNR GDK S TSL  KI  KRGVRSGV
Sbjct: 3  AAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGV 62

Query: 62 TADSPT 68
           A   T
Sbjct: 63 IAGRST 68

[Close]

BLAST of Pay0021630 vs. NCBI nr
Match: KAA0035099.1 (hypothetical protein E6C27_scaffold57G001740 [Cucumis melo var. makuwa] >TYJ95979.1 hypothetical protein E5676_scaffold271G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 4.5e-48
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 64  DSPTPPNLPQQTINKERLPSSDPHLSPPLSNQRAARNNTKAHRRDQLADTRLSLKRLRSN 123
           DSPTPPNLPQQTINKERLPSSDPHLSPPLSNQRAARNNTKAHRRDQLA TRLSLKRLRSN
Sbjct: 47  DSPTPPNLPQQTINKERLPSSDPHLSPPLSNQRAARNNTKAHRRDQLAGTRLSLKRLRSN 106

Query: 124 RDSIRKRRRRNHLRAWHRSYSSRGCLPTVSLLYIWFGILWSISA 168
           RDSIRKRRRRNHLRAWHRSYSSRGCLPTVSLLYIWFGILWSISA
Sbjct: 107 RDSIRKRRRRNHLRAWHRSYSSRGCLPTVSLLYIWFGILWSISA 150

[Close]

BLAST of Pay0021630 vs. NCBI nr
Match: KAA0035100.1 (hypothetical protein E6C27_scaffold57G001750 [Cucumis melo var. makuwa] >TYJ95978.1 hypothetical protein E5676_scaffold271G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 4.7e-21
Identity = 64/75 (85.33%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1  MAAIQRFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSG 60
          MAAI RFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSG
Sbjct: 1  MAAIHRFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSG 60

Query: 61 VTADSPTPPNLPQQT 76
          VTA   T  +  Q +
Sbjct: 61 VTAGRSTSSSSAQMS 75

[Close]

BLAST of Pay0021630 vs. NCBI nr
Match: KGN65176.1 (hypothetical protein Csa_019975 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 8.9e-12
Identity = 49/66 (74.24%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 2  AAIQRFLLPLALISLLLFSESLAAISSTDHGQNSNRRGDKGSDTSLAGKIISKRGVRSGV 61
          AAI RFLLP+ALISLLLFSESL AISS+DH Q+SNR GDK S TSL  KI  KRGVRSGV
Sbjct: 3  AAIHRFLLPIALISLLLFSESLPAISSSDHIQDSNRPGDKDSGTSLTEKISIKRGVRSGV 62

Query: 62 TADSPT 68
           A   T
Sbjct: 63 IAGRST 68

The following BLAST results are available for this feature:

BLAST of Pay0021630 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0021630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAD8	2.2e-48	99.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LTC2	3.9e-29	77.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257320 PE=4 SV=1	[more]
A0A5D3BCG4	2.3e-21	85.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LYV9	4.3e-12	74.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257330 PE=4 SV=1	[more]

BLAST of Pay0021630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035099.1	4.5e-48	99.04	hypothetical protein E6C27_scaffold57G001740 [Cucumis melo var. makuwa] >TYJ9597...	[more]
KAA0035100.1	4.7e-21	85.33	hypothetical protein E6C27_scaffold57G001750 [Cucumis melo var. makuwa] >TYJ9597...	[more]
KGN65176.1	8.9e-12	74.24	hypothetical protein Csa_019975 [Cucumis sativus]	[more]

BLAST of Pay0021630 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021630.1	Pay0021630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane