Pay0021628 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021628
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	photosynthetic NDH subunit of subcomplex B 5, chloroplastic
Location	chr06: 3472219 .. 3474413 (-)
RNA-Seq Expression	Pay0021628
Synteny	Pay0021628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTATCGTTAGAACAAAAGGCGGGGATTTAACGTTCAGAAATTAAAGACGATAAACCCAAAAATGGCCTCCTCTTCTTCCCTCCCCGTTCTTTCTTTCAATCCAATCCCCAAAATCATCTTCGGATCTTCTGAAATTGTTGCTGCACCGTTTTCGATTCAAACAATTCAGGGAAGCAACGGAATCTCCTCCTCCAAGTTGCTCGGAAAATTGACGAGGAGAAGCCTCTCGCGGCGGCTGAATGCGGCGGGATTGTCCGAGATTGAACCCGACTTAAACGAAGACCCTGTAGATCGTTGGGAAACCAACAGCGTCAGCCCTGTATGAACTATGAACCGCTCTCCTTGTGCTCTCTCTCTGCTTCATTAACTCTCTGATTTTGTTGTGTTTTAAGTTTTGAAGTTATGAGTTGTGATGAGTTTAATTGGATTCGCTGATTTAAATTAAAATTAAATTCAATGTCAGTTAATTTCGGGACGGAGATGTTGATAATTTTGTGTTTCGTTTCATAGGAAGATTTTGAGTATGGAGTATACGATGGACATCACACTTACTTTGAAGGGGAGAAGAAAGGTTGGTTCATTAACATATGCAACTGGGTTTTTTTTCGTTCCTTGTTTGGGAGAATCTTTTAAATTTGGATGCTAGAATCTACCAGAACTTGTTTCTGTTTAGGCTGAGTGGAATGTGGATTTAATCCATGGAGTTGGTTTTTGATTCTTGGAGCCCTTAGTTCTCTGATTTAGACATTCCAAGCATGAAATTTTGCTTTCCCATAAGTCCTTTAATATCTAATTTCGGGAGTTTTTTAGTAGACTTCACATTTCTCGATGCCATGTGCCATCGCAGTTGAGCCAATGTGAAACTGACTATAATCAATCTCACTCAGACTGTGTACCAAATGACTTTAAGCATAGTGACAAAAGGATTTTAATTAATTAAAAACACTATGGAGCTTCTCAGGATGTTTTGTTTTATACTAGAAGTAATTTTGAAAATGTTAGGAACACCTACAACCAAACCAATGTTTTGATCTTTTCCTAAAGTACTTCATTTGCACTTCCTTTAGAAGTTATCCCGAACTAACTTTTTAATCAAATTGAGAAGTTGATGATAACTTTGGTATAAATTTTTGCATCTCTTTAAGCAGTATCAATGACGAGGAGTACTGACCAACTTGTGCTGGTAGTATGGATATTTGTCTCCCTGCTAATTCCTTTGGCTAGTAAATTCTGGTACTGATTACTTTTCACTGGCAACTTCTTCATAGGAACATTCTGGGGAGCCATTGCAGATGATATTGCTGCAGTTGGACCCCCAACAGGCTTTCAGGGTAAACTATTGTCGCTCTTTCATAACTCAATCCTCTAACTTCAACACTCTTTTTATTATTATCACATTTGACATTCTTGGCAGGCCTCATGTCTTGGCTCTTCCTACCAGCAGTTGCTGCTGGAATGTACTTCAATGTTCCGGTACTTTCAAGCATACTTTGGAGTGATTTTTGAAATGGTTAAAATCACTTTTGTCTTGTTCAAGATTGCTTTTAATAAATGTATACTATATGAAAGTAGCATTTAAGTAGCATTTAAGTGAGATTTATCTTAAAATGTCATTTATCTTCTTCTTCTTTGCAATTGTCGAGGACACTTGGTTGGTTCTTATTGGACTCTATTTCAGGGGGAGTATCTATACATTGGAGCAGCTATATTTACAATAGTATTCTGCATAATCGAAATTGACAAGCCAGACCAGCCACACAACTTCGAACCTCAGATATATAACATGGAGAGAGGGGCTCGTGACAAGTTGATATCAGACTACAACACCATGGACATCTGGGAATTCAATGAGAAGTATGGAGACTTGTGGGATTTCACTGTCAAGAACGATGATATAACAAAGACATGATTGCCTCCTCAGTGGATGTACATTGTAAGGCAAGTGAGAATTCTTTATCAAAATCTGTATGAAAATGTATATCATACAATACAACAATGTTCTTGGTCTTCTAATTATAGTATTAGTGAATGTAAATTGTAATTATGAACTGAACTTATCATCCGTTTAGCAAGAATGTTTCTCTTGTATTTCTTTTAATCTTCTTGCGCCAAACCCACTTGTCAAGTAATTTGAGGTACTTTCACCCTCCCTCTTGAGATCTTTCACAAGCCTAGTTCACTTTCCTGATGTC

mRNA sequence

CTTTTATCGTTAGAACAAAAGGCGGGGATTTAACGTTCAGAAATTAAAGACGATAAACCCAAAAATGGCCTCCTCTTCTTCCCTCCCCGTTCTTTCTTTCAATCCAATCCCCAAAATCATCTTCGGATCTTCTGAAATTGTTGCTGCACCGTTTTCGATTCAAACAATTCAGGGAAGCAACGGAATCTCCTCCTCCAAGTTGCTCGGAAAATTGACGAGGAGAAGCCTCTCGCGGCGGCTGAATGCGGCGGGATTGTCCGAGATTGAACCCGACTTAAACGAAGACCCTGTAGATCGTTGGGAAACCAACAGCGTCAGCCCTGAAGATTTTGAGTATGGAGTATACGATGGACATCACACTTACTTTGAAGGGGAGAAGAAAGGAACATTCTGGGGAGCCATTGCAGATGATATTGCTGCAGTTGGACCCCCAACAGGCTTTCAGGGCCTCATGTCTTGGCTCTTCCTACCAGCAGTTGCTGCTGGAATGTACTTCAATGTTCCGGGGGAGTATCTATACATTGGAGCAGCTATATTTACAATAGTATTCTGCATAATCGAAATTGACAAGCCAGACCAGCCACACAACTTCGAACCTCAGATATATAACATGGAGAGAGGGGCTCGTGACAAGTTGATATCAGACTACAACACCATGGACATCTGGGAATTCAATGAGAAGTATGGAGACTTGTGGGATTTCACTGTCAAGAACGATGATATAACAAAGACATGATTGCCTCCTCAGTGGATGTACATTGTAAGGCAAGTGAGAATTCTTTATCAAAATCTGTATGAAAATGTATATCATACAATACAACAATGTTCTTGGTCTTCTAATTATAGTATTAGTGAATGTAAATTGTAATTATGAACTGAACTTATCATCCGTTTAGCAAGAATGTTTCTCTTGTATTTCTTTTAATCTTCTTGCGCCAAACCCACTTGTCAAGTAATTTGAGGTACTTTCACCCTCCCTCTTGAGATCTTTCACAAGCCTAGTTCACTTTCCTGATGTC

Coding sequence (CDS)

ATGGCCTCCTCTTCTTCCCTCCCCGTTCTTTCTTTCAATCCAATCCCCAAAATCATCTTCGGATCTTCTGAAATTGTTGCTGCACCGTTTTCGATTCAAACAATTCAGGGAAGCAACGGAATCTCCTCCTCCAAGTTGCTCGGAAAATTGACGAGGAGAAGCCTCTCGCGGCGGCTGAATGCGGCGGGATTGTCCGAGATTGAACCCGACTTAAACGAAGACCCTGTAGATCGTTGGGAAACCAACAGCGTCAGCCCTGAAGATTTTGAGTATGGAGTATACGATGGACATCACACTTACTTTGAAGGGGAGAAGAAAGGAACATTCTGGGGAGCCATTGCAGATGATATTGCTGCAGTTGGACCCCCAACAGGCTTTCAGGGCCTCATGTCTTGGCTCTTCCTACCAGCAGTTGCTGCTGGAATGTACTTCAATGTTCCGGGGGAGTATCTATACATTGGAGCAGCTATATTTACAATAGTATTCTGCATAATCGAAATTGACAAGCCAGACCAGCCACACAACTTCGAACCTCAGATATATAACATGGAGAGAGGGGCTCGTGACAAGTTGATATCAGACTACAACACCATGGACATCTGGGAATTCAATGAGAAGTATGGAGACTTGTGGGATTTCACTGTCAAGAACGATGATATAACAAAGACATGA

Protein sequence

MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLNAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAVGPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQIYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT

Homology

[Close]

BLAST of Pay0021628 vs. ExPASy Swiss-Prot
Match: Q9FG89 (Photosynthetic NDH subunit of subcomplex B 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB5 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.3e-72
Identity = 126/175 (72.00%), Postives = 154/175 (88.00%), Query Frame = 0


Query: 48  GKLTRR-SLSRRLNAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGE-K 107
           GK  RR  L++ ++AAGLS+IEPD+NEDP+ ++ETNS+  EDF+YG YDG HTY+EGE +
Sbjct: 35  GKSGRRLKLAKLVSAAGLSQIEPDINEDPIGQFETNSIEMEDFKYGYYDGAHTYYEGEVQ 94

Query: 108 KGTFWGAIADDIAAVGPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCII 167
           KGTFWGAIADDIAAV    GFQGL+S +FLPA+A GMYF+ PGEYL+IGAA+FT+VFCII
Sbjct: 95  KGTFWGAIADDIAAVDQTNGFQGLISCMFLPAIALGMYFDAPGEYLFIGAALFTVVFCII 154

Query: 168 EIDKPDQPHNFEPQIYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDI 221
           E+DKPDQPHNFEPQIY +ERGARDKLI+DYNTM IW+FN+KYGD+WDFT++ DDI
Sbjct: 155 EMDKPDQPHNFEPQIYKLERGARDKLINDYNTMSIWDFNDKYGDVWDFTIEKDDI 209

[Close]

BLAST of Pay0021628 vs. ExPASy TrEMBL
Match: A0A5A7U0K2 (Photosynthetic NDH subunit of subcomplex B 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00970 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 5.6e-124
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60
           MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN
Sbjct: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60

Query: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120
           AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV
Sbjct: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120

Query: 121 GPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180
           GPPTGFQGL+SWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI
Sbjct: 121 GPPTGFQGLISWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180

Query: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 224
           YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT
Sbjct: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 223

[Close]

BLAST of Pay0021628 vs. ExPASy TrEMBL
Match: A0A1S3AXF4 (photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483655 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60
           MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTI+GSNGISSSKLLGKLTRRSLSRRLN
Sbjct: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIRGSNGISSSKLLGKLTRRSLSRRLN 60

Query: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120
           AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV
Sbjct: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120

Query: 121 GPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180
           GPPTGFQGL+SWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI
Sbjct: 121 GPPTGFQGLISWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180

Query: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 224
           YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT
Sbjct: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 223

[Close]

BLAST of Pay0021628 vs. ExPASy TrEMBL
Match: A0A0A0L8H7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144120 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.1e-117
Identity = 212/224 (94.64%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAA-PFSIQTIQGSNGISSSKLLGKLTRRSLSRRL 60
           MA  SSLPVLSFNPIPKIIF SSEI++A PFSI+ I G+NGISSSKLLGKLTRRSLS RL
Sbjct: 1   MALCSSLPVLSFNPIPKIIFKSSEIISATPFSIRKISGTNGISSSKLLGKLTRRSLSLRL 60

Query: 61  NAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAA 120
           NAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAA
Sbjct: 61  NAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAA 120

Query: 121 VGPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQ 180
           VGPPTGFQGL+SWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQ
Sbjct: 121 VGPPTGFQGLISWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQ 180

Query: 181 IYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 224
           IYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT
Sbjct: 181 IYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 224

[Close]

BLAST of Pay0021628 vs. ExPASy TrEMBL
Match: A0A6J1IBC3 (photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473099 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107
Identity = 194/222 (87.39%), Postives = 203/222 (91.44%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60
           MA  SSLPVLSFNP+PKIIF SS I A  FS ++I G NGIS++KLLGK  R S  RRLN
Sbjct: 1   MALCSSLPVLSFNPLPKIIFKSSGISATAFSNRSIPGINGISAAKLLGKSARGSRLRRLN 60

Query: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120
           AAGLSEIEPDLNEDPVDRWETNSVS EDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV
Sbjct: 61  AAGLSEIEPDLNEDPVDRWETNSVSAEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120

Query: 121 GPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180
           GPPTGFQG +SWLFLP VAA MYFNVPGEY+YIGAA+FTIVFCIIE+DKPDQPHNFEPQI
Sbjct: 121 GPPTGFQGFISWLFLPVVAAAMYFNVPGEYIYIGAAVFTIVFCIIEMDKPDQPHNFEPQI 180

Query: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK 223
           YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK
Sbjct: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK 222

[Close]

BLAST of Pay0021628 vs. ExPASy TrEMBL
Match: A0A6J1GAI7 (photosynthetic NDH subunit of subcomplex B 5, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452262 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.1e-107
Identity = 194/222 (87.39%), Postives = 203/222 (91.44%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60
           MA  SSLPVLSFNP+PKIIF SS I A  FS ++I G NGIS++KLLGK  R S  RRLN
Sbjct: 1   MALCSSLPVLSFNPLPKIIFKSSGIRATAFSNRSIPGINGISAAKLLGKSARGSRLRRLN 60

Query: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120
           AAGLSEIEPDLNEDPVDRWETNSVS EDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV
Sbjct: 61  AAGLSEIEPDLNEDPVDRWETNSVSAEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120

Query: 121 GPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180
           GPPTGFQG +SWLFLP VAA MYFNVPGEY+YIGAA+FTIVFCIIE+DKPDQPHNFEPQI
Sbjct: 121 GPPTGFQGFISWLFLPVVAAAMYFNVPGEYIYIGAAVFTIVFCIIEMDKPDQPHNFEPQI 180

Query: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK 223
           YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK
Sbjct: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK 222

[Close]

BLAST of Pay0021628 vs. NCBI nr
Match: KAA0049312.1 (photosynthetic NDH subunit of subcomplex B 5 [Cucumis melo var. makuwa] >TYK17246.1 photosynthetic NDH subunit of subcomplex B 5 [Cucumis melo var. makuwa])

HSP 1 Score: 453.4 bits (1165), Expect = 1.2e-123
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60
           MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN
Sbjct: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60

Query: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120
           AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV
Sbjct: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120

Query: 121 GPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180
           GPPTGFQGL+SWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI
Sbjct: 121 GPPTGFQGLISWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180

Query: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 224
           YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT
Sbjct: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 223

[Close]

BLAST of Pay0021628 vs. NCBI nr
Match: XP_008438595.1 (PREDICTED: photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 3.4e-123
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60
           MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTI+GSNGISSSKLLGKLTRRSLSRRLN
Sbjct: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIRGSNGISSSKLLGKLTRRSLSRRLN 60

Query: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120
           AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV
Sbjct: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120

Query: 121 GPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180
           GPPTGFQGL+SWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI
Sbjct: 121 GPPTGFQGLISWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180

Query: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 224
           YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT
Sbjct: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 223

[Close]

BLAST of Pay0021628 vs. NCBI nr
Match: XP_004134105.1 (photosynthetic NDH subunit of subcomplex B 5, chloroplastic [Cucumis sativus] >KGN56922.1 hypothetical protein Csa_009676 [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 1.0e-116
Identity = 212/224 (94.64%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAA-PFSIQTIQGSNGISSSKLLGKLTRRSLSRRL 60
           MA  SSLPVLSFNPIPKIIF SSEI++A PFSI+ I G+NGISSSKLLGKLTRRSLS RL
Sbjct: 1   MALCSSLPVLSFNPIPKIIFKSSEIISATPFSIRKISGTNGISSSKLLGKLTRRSLSLRL 60

Query: 61  NAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAA 120
           NAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAA
Sbjct: 61  NAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAA 120

Query: 121 VGPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQ 180
           VGPPTGFQGL+SWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQ
Sbjct: 121 VGPPTGFQGLISWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQ 180

Query: 181 IYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 224
           IYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT
Sbjct: 181 IYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITKT 224

[Close]

BLAST of Pay0021628 vs. NCBI nr
Match: XP_038878594.1 (photosynthetic NDH subunit of subcomplex B 5, chloroplastic [Benincasa hispida])

HSP 1 Score: 416.4 bits (1069), Expect = 1.6e-112
Identity = 205/222 (92.34%), Postives = 211/222 (95.05%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60
           MA  SSLPVLSFNPIPKIIF SSEI A  FS QTI  SNGIS+SKLLG LTRRSLSRRLN
Sbjct: 1   MAPCSSLPVLSFNPIPKIIFKSSEISATAFSNQTIPVSNGISASKLLGILTRRSLSRRLN 60

Query: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120
           AAGLSEIE DLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV
Sbjct: 61  AAGLSEIELDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120

Query: 121 GPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180
           GPPTGFQG++SWLFLPAVAAGMYFN+PGEYLYIGAAIFTIVFCIIE+DKPDQPHNFEPQI
Sbjct: 121 GPPTGFQGVISWLFLPAVAAGMYFNIPGEYLYIGAAIFTIVFCIIEMDKPDQPHNFEPQI 180

Query: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK 223
           YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKN+DITK
Sbjct: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNNDITK 222

[Close]

BLAST of Pay0021628 vs. NCBI nr
Match: KAG7028861.1 (Photosynthetic NDH subunit of subcomplex B 5, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401.4 bits (1030), Expect = 5.2e-108
Identity = 195/222 (87.84%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MASSSSLPVLSFNPIPKIIFGSSEIVAAPFSIQTIQGSNGISSSKLLGKLTRRSLSRRLN 60
           MA  SSLPVLSFNP+PKIIF SSEI A  FS ++I G NGIS++KLLGK  R S  RRLN
Sbjct: 1   MALCSSLPVLSFNPLPKIIFKSSEISATAFSNRSIPGINGISAAKLLGKSARGSRLRRLN 60

Query: 61  AAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120
           AAGLSEIEPDLNEDPVDRWETNSVS EDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV
Sbjct: 61  AAGLSEIEPDLNEDPVDRWETNSVSAEDFEYGVYDGHHTYFEGEKKGTFWGAIADDIAAV 120

Query: 121 GPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCIIEIDKPDQPHNFEPQI 180
           GPPTGFQG +SWLFLP VAA MYFNVPGEY+YIGAA+FTIVFCIIE+DKPDQPHNFEPQI
Sbjct: 121 GPPTGFQGFISWLFLPVVAAAMYFNVPGEYIYIGAAVFTIVFCIIEMDKPDQPHNFEPQI 180

Query: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK 223
           YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK
Sbjct: 181 YNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDITK 222

[Close]

BLAST of Pay0021628 vs. TAIR 10
Match: AT5G43750.1 (NAD(P)H dehydrogenase 18 )

HSP 1 Score: 274.2 bits (700), Expect = 9.0e-74
Identity = 126/175 (72.00%), Postives = 154/175 (88.00%), Query Frame = 0


Query: 48  GKLTRR-SLSRRLNAAGLSEIEPDLNEDPVDRWETNSVSPEDFEYGVYDGHHTYFEGE-K 107
           GK  RR  L++ ++AAGLS+IEPD+NEDP+ ++ETNS+  EDF+YG YDG HTY+EGE +
Sbjct: 35  GKSGRRLKLAKLVSAAGLSQIEPDINEDPIGQFETNSIEMEDFKYGYYDGAHTYYEGEVQ 94

Query: 108 KGTFWGAIADDIAAVGPPTGFQGLMSWLFLPAVAAGMYFNVPGEYLYIGAAIFTIVFCII 167
           KGTFWGAIADDIAAV    GFQGL+S +FLPA+A GMYF+ PGEYL+IGAA+FT+VFCII
Sbjct: 95  KGTFWGAIADDIAAVDQTNGFQGLISCMFLPAIALGMYFDAPGEYLFIGAALFTVVFCII 154

Query: 168 EIDKPDQPHNFEPQIYNMERGARDKLISDYNTMDIWEFNEKYGDLWDFTVKNDDI 221
           E+DKPDQPHNFEPQIY +ERGARDKLI+DYNTM IW+FN+KYGD+WDFT++ DDI
Sbjct: 155 EMDKPDQPHNFEPQIYKLERGARDKLINDYNTMSIWDFNDKYGDVWDFTIEKDDI 209

The following BLAST results are available for this feature:

BLAST of Pay0021628 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG89	1.3e-72	72.00	Photosynthetic NDH subunit of subcomplex B 5, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of Pay0021628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0K2	5.6e-124	99.55	Photosynthetic NDH subunit of subcomplex B 5 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3AXF4	1.6e-123	99.10	photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X2 OS=Cucumi...	[more]
A0A0A0L8H7	5.1e-117	94.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144120 PE=4 SV=1	[more]
A0A6J1IBC3	1.6e-107	87.39	photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X1 OS=Cucurb...	[more]
A0A6J1GAI7	2.1e-107	87.39	photosynthetic NDH subunit of subcomplex B 5, chloroplastic OS=Cucurbita moschat...	[more]

BLAST of Pay0021628 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049312.1	1.2e-123	99.55	photosynthetic NDH subunit of subcomplex B 5 [Cucumis melo var. makuwa] >TYK1724...	[more]
XP_008438595.1	3.4e-123	99.10	PREDICTED: photosynthetic NDH subunit of subcomplex B 5, chloroplastic isoform X...	[more]
XP_004134105.1	1.0e-116	94.64	photosynthetic NDH subunit of subcomplex B 5, chloroplastic [Cucumis sativus] >K...	[more]
XP_038878594.1	1.6e-112	92.34	photosynthetic NDH subunit of subcomplex B 5, chloroplastic [Benincasa hispida]	[more]
KAG7028861.1	5.2e-108	87.84	Photosynthetic NDH subunit of subcomplex B 5, chloroplastic, partial [Cucurbita ...	[more]

BLAST of Pay0021628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43750.1	9.0e-74	72.00	NAD(P)H dehydrogenase 18	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034569	Photosynthetic NDH subunit of subcomplex B 5, chloroplastic	PANTHER	PTHR36399	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 5, CHLOROPLASTIC	coord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021628.1	Pay0021628.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006979	response to oxidative stress
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane