Pay0021619 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021619
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	50S ribosomal protein L13
Location	chr12: 726144 .. 732384 (+)
RNA-Seq Expression	Pay0021619
Synteny	Pay0021619

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGAGTACTGGTGGCCCTTGTAAGTTCTATTTGCATGCCTGGTTGCAACGAAAGGTACGTGATTCGTGACGACAGAACGGACTTTAAGAAGGGGATTAATAAGCAGTATGTGGGTTCATTTTTTGAATTTAAGTTCATCTTACTGTTGAACTTCCATGAAAAGTGGTGGGAATGGGAAACTGGAATGCTCGGGTGGTGAGCTTTTGTGACTTGGCGCTGGAGATGGCCGTGTAGTTGATATCTGATTGATCCAGCTCTTTGGTCTCATGTGCCCAAAAATGTAAATTCCTAGTCTACGGCATATGGTGTACAAAATTTTCATATTGGGGAAATGTAATTCTATATTTCTAAGATAATCCTTTACTTCTCAAAGCATTGTTCAGCATACAGGCTTGTTGGCTGGTAAGAATGGAGATGGGTTAACTATAAGATTGGTCCAAAAAAGAAAATCGAGTGTAGGTAATTGTCAATATGAGAGAGTACTTAGTGTAGGTGATCTATGATTTAAAAGTGTTTTTTATTTGATAGTAAATTTTGTTGGAACAATTGAACAAGTTGTCTAGCGAGGTTTAGTGGAAGTTTTTACACGGCAGTGTATTGTCACAATCTAATTCCATTGAATTAAATTTGACTTGGTTTCGATAACATTTTAAAACATATTGAGATAGAGAAAATATTTATAAATAAGGATAAAGGATTTTGATTTTATATTAGTGAGAACCGTTGCTAATTATTTGAATCGGTTAAATTAACTTTTCTAATTTAGATTTTTTTTAAAAATATAAAATAATTAAATATTACTAAGCCTAAGATAAAATTTGGAGTTTCTACATGATAGAAATTGATAATTTCTATATGGTGTTACTTATAAGAAGCATAATCAAGCTACATGTTATGCTAAAAGTTATATTTATTATTTGGAAAAAATTCTATTTTTTTTATTTGTTTTAGTCCTTTCGTTTTCTATTTTAAAATTTTCTCATAGAAGAAGCTCTATGGTCTAAACCCTCCCTCCCATTTTCAGCCACTGCACACTGCCGCCCCTCTTGCCCGACACCGCCTTAGCAACTGCCGCCGCACACTGCACTCTCAGCTGCCGCAGCTTTGCTCTTCCGACGAGCTCGCCGCTGCTCCTTCCTTCTCACGCTCTTTCGTCTCTCCGAGCAATCGGAGTTACTTATCTCTATATTTCTCTCTCAGAAACACAGAGGTTCAGCCCCTCCACGCCGTTGGTGAGATCGCGCCGCCTTCGGTTATTGTTCAGATCCCAAAGGTTTTTGATTTTTTTTTGATTTTGGTTGATTATCTTCACCCACAGAGAAGAAAATCAAGGTTTTTTGTTTCTAAATTTTTTATCAACCCCCAGTCTAAATGATAATATAAAATTGAGAATGTATACATCACAGGCTAAGGGAAAAGGACCGTATTACTTATGAAATAGTTAAAAAAGAAAGAAAACTTGTTGGAACTGAAAATTTGCTCTCTGTGGGGGGAAATTTGTATTTGAAATATTGATTCTGTGTTAAGGGAAAATTATTTGATGTTAAAGTGTTATCCCAGTTGAGTGTACTGATAAATATCTTGTTATGATGCGGAACAGCGAGAAGCTAGGACATTGATAATGGCAAGCCAAGCAGCTAGTTCTATCAATGGCAACATGAAGGCAAGCCTTCTGTACTTTTACACTAATACATATTAATCATCTGAAATGGTTGTGGAATGCATATTGGACATTTAAGTTGTGCTTTTGATTAGGCGTGTTCTTTGTCAGTTGGTTTTAAAAATGATAGTGTCTACTCTATCAGCTCTTGTTACACAATCTCATGCTAGAGTTTGGGGAAATGTTTTATGCTACAGTTGGGGAACTGTTTGCTTGGAAACTCTGGTGGACCCGTTTCTGAACTTTATTTGATAAGAAACATTGAATTAATAAAGAAGAACAATATTTGTATTCTAGGTTTGATTAGGGTTTACGTTCTGAACATTTAGTATTTGTCCATGCAATTTATTATAATTGGACTGCATGCTTTTAAATTTAAAGTAAACTACCTTCCGTAGTTTACGTTCTGAACATTTAGAAATTGTCGTATCGTGTTTATTGTTACGTTTTATTCAGGTTATTATGGTGTCTTTATAGGGTAAGGTGGTTAGATTTCCTTATGTCAGATCATTCTTAGTGTTATAGACTTCGAACATGCCTTCCGTGGTGTTTTAAGTTAGCCATTAAATGATATTTTCTCTATGTACTGTTTGAAAATTAAGCTATCTTATGAATTTCGGTTTTCTATATATTTAGTTTTTCTTCATTTTTATTGCTACACTGCAAGTTTCTTAAGGGTTGGATGGGGATTTTGTCATTTATGGGAATTTTTTTAGAGTAAGTTTTTAGGTGTATGTTAAGGGCCTTCTTCTCAAGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTGGTTTTTTATTTTTTTATATATTTTTTATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTATATATATATATATGCATGTGTGTATATATTTTATTATTTCTCTGTGTGTTATTTTTTTTTTTTTTTTTTTTTGTCTTGCAGATCCAAAGCTTTGGTACTATCATCAAGTGATAAGCACCAAGACCTAATAATGCTAATGTTATCTTTGTGAATTAATTTTGCGATTAATAGAATTTGAAAGTGGTCATCATATGTGCTGGAGCTGTGAGATCAGTATTCGGTAAATACCTATTGTTAATAATAAAAGAGGTAGTAAGACAAAATGACCTCTTTTCCCTCTTTTGTAAAGGACCTTAGCATACTTTTTAGAATATAAGTTCTCCCACTTTTGTAGGTGAGCCAAGCAATTTACCCGCGAACCCAATATTAACTTGTAAGCTATTTGAAGGAGTAGCAAAATTCATTTTGTGATCATCGTTGATGGTATAAACTCTGTAGGCAAAATTCCAGGAGATTCCCCTTGCTATATGAATACATTGTGTAGAAGGAGAAGTGAAGACTTAAAAACTGTATGTTGTGTTGATGCACTTCTAAGGACTTTCCAATGGTTGAAGGAGCCTGTTTCCATGGATAATGAAGGAAGTTATGTTGGGATATGGGCGGTTTATTTTAGCACTCAAGTTTCTCTGCTGTTATATGGACTATTTGATTAGAATGAGGAAAATTTTCATTTGGTCCTAAGTTATTAGCCAGGAACTTTTGTGAGAATGAAACAGGAAGGCTTTCGTTTATAGTGGTTGGGATTTTATCCTCAATGAGTTTGGTCTGCCCTTGTGTCTTCCGGATCAGATTGATAGCCGGTTGAATTCCTCTTATTTTACTTGGCCTTTCCCCGGTGTTCTTTGAATAAGTACTTTTGTTATACAAGCACAAACCATTAACATTGCTATGCATCAACAATGTTCCAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTTGAATGCATTATTAACTCTTCACTTGATATTTGGTTTCTCAGATTATGAGATAGAATGTTCAACAGTAGTGATATTTGCTAGAAACAAAGAAAGCTGCTCTAACTTTTTCTACCAGGTTCTTGGGAGATTGGCATCTAAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATATACACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTAAGTAAGTACTATATGTTTCTGTAGTTTTACTCAAAAAGTATTGGTCATTGGCACGTACTCTGAAGTTCGCTAATTTATTTTCATCAGTTAAGATTTGATCAGGATTTGTTTTGTTGAAATTTTAGGCAAGATTAGAACTACATTTGTTTTGTTGAAATTTTAGGCCGCATTTGGTTCTTAGTTTCAAATTAGTCTCACGAGTAAATAGAGTGGAAATTTTGTAGGCCAAATTCAAACAAAACACGTTCTCAAACATACTTTTAAGTTTCATAACATTGCTGCTTTTTAAACAATTGATAAAAAGAGATAGGACCAAAAACAAAAGTAATCAAATGGTTACTAGAAGAGCGGGTTTAGCTTTGGTGTAAATTCTAAATGGACTTAAGGCCGTTGGATTATTTTTCGAATGACTGTCAAAAAGAATTATTCTCTCTTAAAAACCTTGATTCTAAACTCTTAAAAATTATATACAAACAAGTCCTTGATTCTGTCGCAGAAAGTTAGAGGGAAGGAGATCACTTTAGTGCTGCTTTGGTAATAGTAACACTTCGATGTGCTCTGTGTTTCATTATTTGTTTTCAACTATGCGTGGCCTTGTAGGTATGTTGGGCACCTGAAGGAAAGAACTTTGAGGGAACAGATGAACAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATGTTAGTCCTTAAATTTATTTGGTGTTACAATCTTGTTGACAAGTGAGGGATTGCATCATGTTTTAATAAATTTCATGCCTTTTTCATCAAGCCATGTGGACACTGCAGGACGGTATTTTATATTGATAACTTCTATTTGATGCATGGATAAGATGAGAACTGAGAATTTTTGCTGTGGATGAAGACCCTTTTGGGCGACGCTCCACTTGAGCCCCTATATCATTCCACCTCGAATGTAAGAGAGATGCGGCCGTCGAGGTAAGACGGGCAATGGATTAGAGCGCAAGAAGGCCGAGCTACAAAAACAGCAAGACGCGAATTACGAAATAGGGAAGTAGAAAGAAAGAAGAGAAGGTAGAAGTGAAGGCCTGATTTCTTCTGCCCTTATGGGAGTTTTGTGTAGATCTGAATTAGTTGGGAATTTGATTGAATTGCATCAGGGCTGTCTTTAATTGAACCGAGTAACTTGGATTTGATATCATTTGTAAAGATATGATGCCCTGTTTGTTCAATGCTTGGATATCCAAGGGAAACGTGTTTAGTTTCTTTTTCTTAGATGCAACTAATAAGTTATTCTGTTGCTATTACACTTTACGATCACTTCCAATTATTCTTTTCTTTTAGAGATGAAAAGACATGGTGAAGTTGTCAGAAACAGAACATAATGTAACAAGATCTAATATTTACTATAATCACTTGTTCAGAAGAGTAATTGAAAGCTAAGATAAGCTTGATCGGTATTGGCTGCATATTTTTTTTTCAATTTTCAGTTGATTGTGCAATATATTTTTTTAGACGTCTTGATTACTTACTACAGTATTTTTTTTTTTTTTTTTTTTGTAAAAATGCAAAATATAGAACAGCATACTAAACTATGATGTAGTATTAAATTTAATTTAACTGGCGGCTTAAGTTTAGTTCCACTTATGACTGGACAATTTTTAAGATTTTGTTTTTTATTTTTTAAACACTATATTCGACTAGATATGATCGCTAGTCTATATGATTGGTGTGTCTTGTAGTTTAATGAGTTCGAGATTTTTTACAAATATGATTTAATTTAGTATATTTGTTAAATTTATTATCTTCTTTTTCAATTTCTGGTCTAATCTGGAACGTATTTAGCTTTATTTTTAGTGTTTTCATAAGAGTAAAGTTACAAACACATAAGATTCAAATATATTAGATATTAGACACAATTAAAATTAGCACGTGTATATATATTTGAAAGTTTAGGTACTAAACTTATATCTCAAACTTTTGTTATTATTAATAAAATCTAGACCTACACTCACAAATGCTTATGTTGAGTTTGAGAAGGTCACCATTGTTTTGAATTATGTTCAAATAAGGCAACTTCTTAACTAGGGTTATCTATTTCTCCCACATCGAAACAACATAAAACACAATTCTTTTTTATTCAACGAATTCCCAACTAAGCTGTCGCCGAGCCTGGTTGCGAGGGCTTATGACCCGAGTGGGGGCATCAAATTGATGGAACGGGAGGTTTCGTCCTGCTGGGCTGGATTTGGCGTGGATTGTTCTGGGCCGCCCATTTCAAGCATGGAGGAAAGCCATGGTGCTTGGGCGGAGGCCCAGGTTCCATGGGCTTCTAGAGCGGGGGGGAACGCGTGA

mRNA sequence

ATGATGAGAGTACTGGTGGCCCTTGTAAGTTCTATTTGCATGCCTGGTTGCAACGAAAGGTACGTGATTCGTGACGACAGAACGGACTTTAAGAAGGGGATTAATAAGCAGTATAAGAAGCTCTATGGTCTAAACCCTCCCTCCCATTTTCAGCCACTGCACACTGCCGCCCCTCTTGCCCGACACCGCCTTAGCAACTGCCGCCGCACACTGCACTCTCAGCTGCCGCAGCTTTGCTCTTCCGACGAGCTCGCCGCTGCTCCTTCCTTCTCACGCTCTTTCGTCTCTCCGAGCAATCGGAGTTACTTATCTCTATATTTCTCTCTCAGAAACACAGAGGTTCAGCCCCTCCACGCCGTTGGTGAGATCGCGCCGCCTTCGGTTATTGTTCAGATCCCAAAGCGAGAAGCTAGGACATTGATAATGGCAAGCCAAGCAGCTAGTTCTATCAATGGCAACATGAAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTCTTGGGAGATTGGCATCTAAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATATACACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTATGTTGGGCACCTGAAGGAAAGAACTTTGAGGGAACAGATGAACAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATCTGTCGCCGAGCCTGGTTGCGAGGGCTTATGACCCGAGTGGGGGCATCAAATTGATGGAACGGGAGGTTTCGTCCTGCTGGGCTGGATTTGGCGTGGATTGTTCTGGGCCGCCCATTTCAAGCATGGAGGAAAGCCATGGTGCTTGGGCGGAGGCCCAGGTTCCATGGGCTTCTAGAGCGGGGGGGAACGCGTGA

Coding sequence (CDS)

ATGATGAGAGTACTGGTGGCCCTTGTAAGTTCTATTTGCATGCCTGGTTGCAACGAAAGGTACGTGATTCGTGACGACAGAACGGACTTTAAGAAGGGGATTAATAAGCAGTATAAGAAGCTCTATGGTCTAAACCCTCCCTCCCATTTTCAGCCACTGCACACTGCCGCCCCTCTTGCCCGACACCGCCTTAGCAACTGCCGCCGCACACTGCACTCTCAGCTGCCGCAGCTTTGCTCTTCCGACGAGCTCGCCGCTGCTCCTTCCTTCTCACGCTCTTTCGTCTCTCCGAGCAATCGGAGTTACTTATCTCTATATTTCTCTCTCAGAAACACAGAGGTTCAGCCCCTCCACGCCGTTGGTGAGATCGCGCCGCCTTCGGTTATTGTTCAGATCCCAAAGCGAGAAGCTAGGACATTGATAATGGCAAGCCAAGCAGCTAGTTCTATCAATGGCAACATGAAGAAAGCACTTGCTGGCTTGAAACGCATCAATTTGGAAGGCCTGAGGTGGAGAGTGTTTGATGCCAAAGGCCAGGTTCTTGGGAGATTGGCATCTAAAATATCTACCGTGATTCAAGGCAAGGATAAGCCAACATATACACCCAATCGAGATGATGGGGATATGTGCATTGTGCTTAATGCTAAGGATATCGCTGTCACAGGAAGAAAACTCACTAAAAAAGTTTATTACTGGCATACAGGGTATGTTGGGCACCTGAAGGAAAGAACTTTGAGGGAACAGATGAACAGAGACCCTACAGAAGTCATACGTAAAGCTGTGTTACGCATGCTTCCAAAAAATAAACTGCGTGATCTGTCGCCGAGCCTGGTTGCGAGGGCTTATGACCCGAGTGGGGGCATCAAATTGATGGAACGGGAGGTTTCGTCCTGCTGGGCTGGATTTGGCGTGGATTGTTCTGGGCCGCCCATTTCAAGCATGGAGGAAAGCCATGGTGCTTGGGCGGAGGCCCAGGTTCCATGGGCTTCTAGAGCGGGGGGGAACGCGTGA

Protein sequence

MMRVLVALVSSICMPGCNERYVIRDDRTDFKKGINKQYKKLYGLNPPSHFQPLHTAAPLARHRLSNCRRTLHSQLPQLCSSDELAAAPSFSRSFVSPSNRSYLSLYFSLRNTEVQPLHAVGEIAPPSVIVQIPKREARTLIMASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDLSPSLVARAYDPSGGIKLMEREVSSCWAGFGVDCSGPPISSMEESHGAWAEAQVPWASRAGGNA

Homology

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BLAST of Pay0021619 vs. ExPASy Swiss-Prot
Match: O67722 (50S ribosomal protein L13 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rplM PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.6e-26
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 170 RWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKV 229
           +W V DA G+ LGRLAS+I+ +++GK KP Y P+ D GD  IV+NA+ I VTG+KL +K 
Sbjct: 14  KWWVVDATGKTLGRLASEIAKILRGKHKPYYQPDVDCGDFVIVINAEKIRVTGKKLEQKK 73

Query: 230 YYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKL 271
           YYWH+ Y G LKERTL+  +   P EVIR AV RMLPKN+L
Sbjct: 74  YYWHSRYPGGLKERTLKWMLENKPEEVIRLAVKRMLPKNRL 114

[Close]

BLAST of Pay0021619 vs. ExPASy Swiss-Prot
Match: Q18CJ1 (50S ribosomal protein L13 OS=Clostridioides difficile (strain 630) OX=272563 GN=rplM PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.6e-26
Identity = 56/102 (54.90%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 170 RWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKV 229
           +W + DA+G+ LGRLA++I+TV++GK KPT+TP+ D GD  +V+NA+ I ++G+KL +K 
Sbjct: 14  KWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKY 73

Query: 230 YYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLR 272
           Y +HTGYVG LKE + R+ M++ P EVI  AV  MLPKNKLR
Sbjct: 74  YRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLR 115

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BLAST of Pay0021619 vs. ExPASy Swiss-Prot
Match: Q1AU63 (50S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=rplM PE=3 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-25
Identity = 52/101 (51.49%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 170 RWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKV 229
           +W V DA+G+ LGRLA++IS +++GK+KP YTP+ D GD  +V+NA  + VTGRK  +KV
Sbjct: 14  KWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQKV 73

Query: 230 YYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKL 271
           Y WHTGY G L+ER+ R+ + + P E++R+AV  M+PK +L
Sbjct: 74  YRWHTGYPGGLRERSYRQMLRKRPEEILRQAVRGMMPKTRL 114

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BLAST of Pay0021619 vs. ExPASy Swiss-Prot
Match: Q9X1G5 (50S ribosomal protein L13 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=rplM PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.0e-25
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 170 RWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKV 229
           +W V DA G+VLGRLA++I+ ++ GK KP YTP+ D GD  IV+NA  + +TG+KL +KV
Sbjct: 21  KWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVLTGKKLDQKV 80

Query: 230 YYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNK 270
           YYWH+GY G LK  T R+ + + P  +I  AV RMLPKN+
Sbjct: 81  YYWHSGYPGGLKSLTARQMLEKHPERLIWLAVKRMLPKNR 120

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BLAST of Pay0021619 vs. ExPASy Swiss-Prot
Match: A5IMD1 (50S ribosomal protein L13 OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874 GN=rplM PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.0e-25
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 170 RWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKV 229
           +W V DA G+VLGRLA++I+ ++ GK KP YTP+ D GD  IV+NA  + +TG+KL +KV
Sbjct: 21  KWYVVDASGKVLGRLATRIAKILMGKHKPNYTPHVDTGDYVIVVNADKVVLTGKKLDQKV 80

Query: 230 YYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNK 270
           YYWH+GY G LK  T R+ + + P  +I  AV RMLPKN+
Sbjct: 81  YYWHSGYPGGLKSLTARQMLEKHPERLIWLAVKRMLPKNR 120

[Close]

BLAST of Pay0021619 vs. ExPASy TrEMBL
Match: A0A5D3CLX7 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005420 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.3e-156
Identity = 296/360 (82.22%), Postives = 298/360 (82.78%), Query Frame = 0


Query: 39  KKLYGLNPPSHFQPLHTAAPLARHRLSNCRRTLHSQLPQLCSSDELAAAPSFSRSFVSPS 98
           KKLYGLNPPSHFQPLHTAAPLARHRLSNCRRTLHSQLPQLCSSDELAAAPSFSRSFVSPS
Sbjct: 492 KKLYGLNPPSHFQPLHTAAPLARHRLSNCRRTLHSQLPQLCSSDELAAAPSFSRSFVSPS 551

Query: 99  NRSYLSLYFSLRNTEVQPLHAVGEIAPPSVIVQIPKREARTLIMASQAASSINGNMKKAL 158
           NRSYLSLYFSLRNTEVQPLHAVGEIAPPSVIVQIPKREARTLIMASQAASSINGNMKKAL
Sbjct: 552 NRSYLSLYFSLRNTEVQPLHAVGEIAPPSVIVQIPKREARTLIMASQAASSINGNMKKAL 611

Query: 159 AGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDI 218
           AGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDI
Sbjct: 612 AGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDI 671

Query: 219 AVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRD------ 278
           AVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRD      
Sbjct: 672 AVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKL 731

Query: 279 -------------------------------------------------------LSPSL 337
                                                                  LSPSL
Sbjct: 732 RIFAGDEHPFGDRPLEPYIMPPRNVREMRPQGYLFLPHRNNIKHNSFLFNEFPTKLSPSL 791

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BLAST of Pay0021619 vs. ExPASy TrEMBL
Match: A0A1S3B177 (50S ribosomal protein L13 OS=Cucumis melo OX=3656 GN=LOC103484711 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 9.5e-67
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 142 MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 201
           MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT
Sbjct: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60

Query: 202 PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 261
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120

Query: 262 LRMLPKNKLRD 273
           LRMLPKNKLRD
Sbjct: 121 LRMLPKNKLRD 131

[Close]

BLAST of Pay0021619 vs. ExPASy TrEMBL
Match: A0A0A0KL19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487720 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 3.7e-63
Identity = 125/131 (95.42%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 142 MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 201
           MASQAA+SI GNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTY 
Sbjct: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 202 PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 261
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVG+LKERTLREQM RDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120

Query: 262 LRMLPKNKLRD 273
           LRMLPKNKLRD
Sbjct: 121 LRMLPKNKLRD 131

[Close]

BLAST of Pay0021619 vs. ExPASy TrEMBL
Match: A0A6P8EBE5 (uncharacterized protein LOC116213144 isoform X2 OS=Punica granatum OX=22663 GN=LOC116213144 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.0e-60
Identity = 116/130 (89.23%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 142 MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 201
           MASQAASS NGN+KKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTYT
Sbjct: 1   MASQAASSFNGNVKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYT 60

Query: 202 PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 261
           PNRDDGDMC+V+NAKDI VTGRKLT KVYYWHTGY GHLKERTL++QM +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCVVINAKDICVTGRKLTDKVYYWHTGYTGHLKERTLKDQMAKDPTEVIRKAV 120

Query: 262 LRMLPKNKLR 272
           LRMLP+NKLR
Sbjct: 121 LRMLPRNKLR 130

[Close]

BLAST of Pay0021619 vs. ExPASy TrEMBL
Match: A0A6P3Z5Q1 (uncharacterized protein LOC107409155 OS=Ziziphus jujuba OX=326968 GN=LOC107409236 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 118/134 (88.06%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 142 MASQ-AASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTY 201
           MASQ AA+S NGN+KKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTY
Sbjct: 1   MASQAAAASFNGNLKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTY 60

Query: 202 TPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKA 261
           TPNRDDGDMCIVLNAKDI VTGRKLT KVY+WHTGYVGHLKER+L++QM +DPTEVIRKA
Sbjct: 61  TPNRDDGDMCIVLNAKDICVTGRKLTNKVYHWHTGYVGHLKERSLKDQMAKDPTEVIRKA 120

Query: 262 VLRMLPKNKLRDLS 275
           VLRMLP+NKLRD+S
Sbjct: 121 VLRMLPRNKLRDVS 134

[Close]

BLAST of Pay0021619 vs. NCBI nr
Match: TYK12947.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 562.4 bits (1448), Expect = 2.7e-156
Identity = 296/360 (82.22%), Postives = 298/360 (82.78%), Query Frame = 0


Query: 39  KKLYGLNPPSHFQPLHTAAPLARHRLSNCRRTLHSQLPQLCSSDELAAAPSFSRSFVSPS 98
           KKLYGLNPPSHFQPLHTAAPLARHRLSNCRRTLHSQLPQLCSSDELAAAPSFSRSFVSPS
Sbjct: 492 KKLYGLNPPSHFQPLHTAAPLARHRLSNCRRTLHSQLPQLCSSDELAAAPSFSRSFVSPS 551

Query: 99  NRSYLSLYFSLRNTEVQPLHAVGEIAPPSVIVQIPKREARTLIMASQAASSINGNMKKAL 158
           NRSYLSLYFSLRNTEVQPLHAVGEIAPPSVIVQIPKREARTLIMASQAASSINGNMKKAL
Sbjct: 552 NRSYLSLYFSLRNTEVQPLHAVGEIAPPSVIVQIPKREARTLIMASQAASSINGNMKKAL 611

Query: 159 AGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDI 218
           AGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDI
Sbjct: 612 AGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDI 671

Query: 219 AVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRD------ 278
           AVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRD      
Sbjct: 672 AVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKLRDDRDRKL 731

Query: 279 -------------------------------------------------------LSPSL 337
                                                                  LSPSL
Sbjct: 732 RIFAGDEHPFGDRPLEPYIMPPRNVREMRPQGYLFLPHRNNIKHNSFLFNEFPTKLSPSL 791

[Close]

BLAST of Pay0021619 vs. NCBI nr
Match: XP_008440163.1 (PREDICTED: 50S ribosomal protein L13 [Cucumis melo] >XP_008440164.1 PREDICTED: 50S ribosomal protein L13 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-66
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 142 MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 201
           MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT
Sbjct: 1   MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 60

Query: 202 PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 261
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 120

Query: 262 LRMLPKNKLRD 273
           LRMLPKNKLRD
Sbjct: 121 LRMLPKNKLRD 131

[Close]

BLAST of Pay0021619 vs. NCBI nr
Match: XP_011657807.1 (uncharacterized protein LOC101204778 [Cucumis sativus] >XP_011657808.1 uncharacterized protein LOC101204778 [Cucumis sativus] >KGN48451.1 hypothetical protein Csa_004216 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 7.7e-63
Identity = 125/131 (95.42%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 142 MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 201
           MASQAA+SI GNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTY 
Sbjct: 1   MASQAATSITGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYA 60

Query: 202 PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 261
           PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVG+LKERTLREQM RDPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGNLKERTLREQMTRDPTEVIRKAV 120

Query: 262 LRMLPKNKLRD 273
           LRMLPKNKLRD
Sbjct: 121 LRMLPKNKLRD 131

[Close]

BLAST of Pay0021619 vs. NCBI nr
Match: XP_038883188.1 (50S ribosomal protein L13 isoform X3 [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 5.5e-61
Identity = 120/131 (91.60%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 142 MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 201
           MASQAASS+NGN+KKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTYT
Sbjct: 1   MASQAASSLNGNLKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYT 60

Query: 202 PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 261
           PNRDDGDMCIVLNAKDIAVTGRKLT KVYYWHTGYVG+LKER L++QM +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCIVLNAKDIAVTGRKLTDKVYYWHTGYVGNLKERNLKDQMAKDPTEVIRKAV 120

Query: 262 LRMLPKNKLRD 273
           LRMLPKNKLRD
Sbjct: 121 LRMLPKNKLRD 131

[Close]

BLAST of Pay0021619 vs. NCBI nr
Match: XP_031403844.1 (uncharacterized protein LOC116213144 isoform X2 [Punica granatum])

HSP 1 Score: 241.5 bits (615), Expect = 1.0e-59
Identity = 116/130 (89.23%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 142 MASQAASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPTYT 201
           MASQAASS NGN+KKALAGL+RINLEGLRWRVFDAKGQVLGRLAS+ISTVIQGKDKPTYT
Sbjct: 1   MASQAASSFNGNVKKALAGLRRINLEGLRWRVFDAKGQVLGRLASQISTVIQGKDKPTYT 60

Query: 202 PNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRKAV 261
           PNRDDGDMC+V+NAKDI VTGRKLT KVYYWHTGY GHLKERTL++QM +DPTEVIRKAV
Sbjct: 61  PNRDDGDMCVVINAKDICVTGRKLTDKVYYWHTGYTGHLKERTLKDQMAKDPTEVIRKAV 120

Query: 262 LRMLPKNKLR 272
           LRMLP+NKLR
Sbjct: 121 LRMLPRNKLR 130

[Close]

BLAST of Pay0021619 vs. TAIR 10
Match: AT3G01790.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-54
Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 142 MASQ--AASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPT 201
           MA+Q  AA+S  GN+KKA+AG+KRINL+GLRWRVFDA+GQVLGRLAS+ISTV+Q KDKPT
Sbjct: 1   MATQAAAAASFKGNLKKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPT 60

Query: 202 YTPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRK 261
           Y PNRDDGD+CIVLNAK+I  TGRKLT K Y WHTGY+GHLKER+L++QM +DPTEVIRK
Sbjct: 61  YCPNRDDGDICIVLNAKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRK 120

Query: 262 AVLRMLPKNKLRD 273
           AV RMLP N LRD
Sbjct: 121 AVWRMLPSNNLRD 133

[Close]

BLAST of Pay0021619 vs. TAIR 10
Match: AT3G01790.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-54
Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 142 MASQ--AASSINGNMKKALAGLKRINLEGLRWRVFDAKGQVLGRLASKISTVIQGKDKPT 201
           MA+Q  AA+S  GN+KKA+AG+KRINL+GLRWRVFDA+GQVLGRLAS+ISTV+Q KDKPT
Sbjct: 1   MATQAAAAASFKGNLKKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPT 60

Query: 202 YTPNRDDGDMCIVLNAKDIAVTGRKLTKKVYYWHTGYVGHLKERTLREQMNRDPTEVIRK 261
           Y PNRDDGD+CIVLNAK+I  TGRKLT K Y WHTGY+GHLKER+L++QM +DPTEVIRK
Sbjct: 61  YCPNRDDGDICIVLNAKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRK 120

Query: 262 AVLRMLPKNKLRD 273
           AV RMLP N LRD
Sbjct: 121 AVWRMLPSNNLRD 133

[Close]

BLAST of Pay0021619 vs. TAIR 10
Match: AT1G78630.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 82.4 bits (202), Expect = 7.5e-16
Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 171 WRVFDAKGQVLGRLASKISTVIQGKDKPTYTPNRDDGDMCIVLNAKDIAVTGRKLTKKVY 230
           W V DA  ++LGRLAS I+  I+GK+  +YTP+ D G   IV+NA+ +AV+G+K  +K+Y
Sbjct: 105 WFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 164

Query: 231 YWHTGYVGHLKERTLREQMNRDPTEVIRKAVLRMLPKNKL 271
             H+G  G +   T  +   R P  ++  AV  MLPK +L
Sbjct: 165 RRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGRL 204

The following BLAST results are available for this feature:

BLAST of Pay0021619 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O67722	4.6e-26	57.43	50S ribosomal protein L13 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rplM PE=...	[more]
Q18CJ1	4.6e-26	54.90	50S ribosomal protein L13 OS=Clostridioides difficile (strain 630) OX=272563 GN=...	[more]
Q1AU63	1.7e-25	51.49	50S ribosomal protein L13 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16...	[more]
Q9X1G5	3.0e-25	53.00	50S ribosomal protein L13 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 /...	[more]
A5IMD1	3.0e-25	53.00	50S ribosomal protein L13 OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13...	[more]

BLAST of Pay0021619 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLX7	1.3e-156	82.22	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3B177	9.5e-67	100.00	50S ribosomal protein L13 OS=Cucumis melo OX=3656 GN=LOC103484711 PE=3 SV=1	[more]
A0A0A0KL19	3.7e-63	95.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487720 PE=3 SV=1	[more]
A0A6P8EBE5	5.0e-60	89.23	uncharacterized protein LOC116213144 isoform X2 OS=Punica granatum OX=22663 GN=L...	[more]
A0A6P3Z5Q1	1.1e-59	88.06	uncharacterized protein LOC107409155 OS=Ziziphus jujuba OX=326968 GN=LOC10740923...	[more]

BLAST of Pay0021619 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12947.1	2.7e-156	82.22	transcription termination factor MTERF5 [Cucumis melo var. makuwa]	[more]
XP_008440163.1	2.0e-66	100.00	PREDICTED: 50S ribosomal protein L13 [Cucumis melo] >XP_008440164.1 PREDICTED: 5...	[more]
XP_011657807.1	7.7e-63	95.42	uncharacterized protein LOC101204778 [Cucumis sativus] >XP_011657808.1 uncharact...	[more]
XP_038883188.1	5.5e-61	91.60	50S ribosomal protein L13 isoform X3 [Benincasa hispida]	[more]
XP_031403844.1	1.0e-59	89.23	uncharacterized protein LOC116213144 isoform X2 [Punica granatum]	[more]

BLAST of Pay0021619 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01790.1	1.1e-54	76.69	Ribosomal protein L13 family protein	[more]
AT3G01790.2	1.1e-54	76.69	Ribosomal protein L13 family protein	[more]
AT1G78630.1	7.5e-16	42.00	Ribosomal protein L13 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005823	Ribosomal protein L13, bacterial-type	TIGRFAM	TIGR01066	TIGR01066	coord: 170..271 e-value: 6.8E-40 score: 134.1
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 170..272 e-value: 2.8E-39 score: 133.9
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 146..272
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 171..296 score: 22.012489
IPR005822	Ribosomal protein L13	CDD	cd00392	Ribosomal_L13	coord: 171..272 e-value: 1.81918E-52 score: 166.911
IPR036899	Ribosomal protein L13 superfamily	GENE3D	3.90.1180.10	Ribosomal protein L13	coord: 165..274 e-value: 1.9E-50 score: 172.9
IPR036899	Ribosomal protein L13 superfamily	SUPERFAMILY	52161	Ribosomal protein L13	coord: 170..272
None	No IPR available	PANTHER	PTHR11545:SF2	39S RIBOSOMAL PROTEIN L13, MITOCHONDRIAL	coord: 146..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021619.1	Pay0021619.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome