Pay0021567 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021567
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Major pollen allergen Ole e 6-like
Location	chr07: 26041913 .. 26042819 (-)
RNA-Seq Expression	Pay0021567
Synteny	Pay0021567

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCATAAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATTGTCTTGAATCTTTGGAGAAATGTTTTTTTTTTAACCAAGACGATAAATAATTTTTTTTGTGTGCGGTCAATTTTAGTTGCGAGGCAAACTTCACTTTTATTATGGAAATTAGTGAGTTTTGTAAGGTAAGGTCGGTACGTGTTCCATACTTTAATATAGTTTTGCTGCTAGAATTTGAAGGGATATGAGATAATTGAAAATTTAGAATGAGAACTCATGTCAAAATTTAAGGAAAATTTAGTTGTTTAATTCTCCCAACTTATTGATCTTTTTCTTTTTATGTGTGTATTAACTTGATTTTTTATTGTCTGTTTTGCAGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTAGGACGTGGAAAATGGTCGGATCAAGTATAAATTATCTGGATAATTAACATTTCAGAGAGGAAAATCTAAATTCCTTGACCCTCGTCTCTTTCATTTTTGTCATCCAATTGGTTGCTTCTTTATATAAAGGTTTTATGTTATGTATCGGACCGGTCTTCTTTCATCATTATTTTCAACAACGAGATCAATAAAATTCATCTAATTTTTGTGTTTGTTCACA

mRNA sequence

AACCCATAAGGAAAAAAATAGGCTTACTAAAAGCTAAAACTAAAAAATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGACCATGAAATTAAAGTTAGGACGTGGAAAATGGTCGGATCAAGTATAAATTATCTGGATAATTAACATTTCAGAGAGGAAAATCTAAATTCCTTGACCCTCGTCTCTTTCATTTTTGTCATCCAATTGGTTGCTTCTTTATATAAAGGTTTTATGTTATGTATCGGACCGGTCTTCTTTCATCATTATTTTCAACAACGAGATCAATAAAATTCATCTAATTTTTGTGTTTGTTCACA

Coding sequence (CDS)

ATGGCAAAAACTAGTACGGTTGTTTTCTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACAGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAACGTAATGCCTCAATTCAAATCATGTGTAGAAACCTGCGCGAAAGCATGCATTGCAAAAGACAGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGATAAAATCAGCGACAAACTAGGCATTCGTAATTGA

Protein sequence

MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETCAKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN

Homology

[Close]

BLAST of Pay0021567 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.8e-45
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
           MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC
Sbjct: 1   MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61  AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 100
           AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61  AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]

BLAST of Pay0021567 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-37
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 89
           KACIAKD ANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of Pay0021567 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45
Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
           MAK+ST+VFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC
Sbjct: 1   MAKSSTIVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60

Query: 61  AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 100
           AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN
Sbjct: 61  AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKLGIRN 99

[Close]

BLAST of Pay0021567 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.1e-37
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAKTSTVVFFMCIVVVVGSLQFSRADMTA+RDTEIEMRSKLLQSEIS+VMPQFKSCVETC
Sbjct: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTADRDTEIEMRSKLLQSEISSVMPQFKSCVETC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVV 89
           KACIAKD ANTSCHSTCDKDCMKKEVV
Sbjct: 61 EKACIAKDGANTSCHSTCDKDCMKKEVV 88

[Close]

BLAST of Pay0021567 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 5.0e-10
Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 3   KTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQ-SEISNVMPQFKSCVETCA 62
           K   VVFFMCI VV+GSLQFS+A  TA    +++   K+   +E   + PQ +SCV TC 
Sbjct: 20  KNIMVVFFMCI-VVMGSLQFSKAQTTANMSPDLQAAEKIKSIAEGMKLWPQMESCVLTCR 79

Query: 63  KACIAKDSANTSCHSTCDKDCMKKEV 88
           K C AK +AN SCH  C+ DC +K +
Sbjct: 80  KECDAKGNANASCHQKCNNDCTEKTI 104

[Close]

BLAST of Pay0021567 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-07
Identity = 43/95 (45.26%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK    V  MC V+VV +LQFS    TA++ TE+E + K   S+   V  +FKSC  TC
Sbjct: 1  MAKKMMAVVLMC-VLVVSALQFS----TADKSTEMEAKFKSFFSDFGTVEAKFKSCAATC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKISDKL 96
           K C      N SC S CD DC KKEV +K   K+
Sbjct: 61 QKKC-----TNASCRSKCDADCGKKEVENKFKIKI 85

[Close]

BLAST of Pay0021567 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-07
Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = 0


Query: 1  MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISNVMPQFKSCVETC 60
          MAK    V  MC V++V +LQFS AD  A    E+E R K    ++S V  + KSC  TC
Sbjct: 1  MAKKMMAVLLMC-VLLVSALQFSTADSPA----EMEARFKSFFGDLSGVEAKLKSCAATC 60

Query: 61 AKACIAKDSANTSCHSTCDKDCMKKEVVDKIS 93
           K C+AK   + SC   C+ DC KKEV +K +
Sbjct: 61 EKECVAKGETSESCKPKCNTDCGKKEVSEKFN 87

The following BLAST results are available for this feature:

BLAST of Pay0021567 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0021567 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3F9	1.8e-45	97.98	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A5A7SXV7	1.0e-37	95.45	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of Pay0021567 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036015.1	3.6e-45	97.98	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAA0035393.1	2.1e-37	95.45	major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]	[more]
KAE8637567.1	5.0e-10	47.67	hypothetical protein CSA_017844, partial [Cucumis sativus]	[more]
KAG6595593.1	1.0e-07	45.26	hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595587.1	1.8e-07	43.48	hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Pay0021567 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 51..95 e-value: 1.8E-10 score: 42.2
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 52..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021567.1	Pay0021567.1	mRNA