Pay0021374 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021374
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Unknown protein
Location	chr10: 2648881 .. 2650692 (-)
RNA-Seq Expression	Pay0021374
Synteny	Pay0021374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACCCCTCCATCTCTCTTGTCTCTCACTATCCATTCTGCCATCCTTAATCTCTCTTCTATCTCTGATCTCTCTTTTCTCCCTGATCACATCGTCCTCCATCTATTCCTGGTACTTCTCTTTTCATATCATCATCATCATCTTCTTCCTTTTTCTTTTCAATTCATTTCCCAATTAATCTTTTCTTTATTCTTTATTTTATTACTTTTGGTCAACGCTGTCTACAGTCTTCTTGTTTCATCAAGATTTATGACGAAAAGACTAATTGGGTGGTGGGTCGAGTTTTGTTTTGTAGAAATGCCAATGGAAGTTTGGATGAGTTTTGTTATTTACATTTCTTTCTGATTTCTACATTACTTCACTTCCGTTATTGTTCGTATTGAAAATCAGTTATTTGTTTGTTTCTCATCAATTAAAAATATTAACAACATTTATTTGTGAATATGAAGTTGTAAATTGTATGTGCGTTATATGAGCTTCAAAATCAGTTTTTATGTGTTTTTACAATTATTGAATCTAGAATGGTCTATATGTGATTTTTATGCTTGCTAGACTCTGATTGCTTCTCGTGCCCTGTTTTTTATTTTGCACCTTTGAGCCAGAAGAAGGTTATGTTGGTGTTGCTGTGAAATTGACGATGGGTAATTTTGGTGTTGTGTAGCGGTTAAATTGTATTATATTTTGTTTAATCTTTTACATGGACTCGCCTTTGCGCTACTATATTACTTATTTCTTTGGAATTTGGAATTTGGAATTTGATATTTGTTCCCCCAAAATGGAATCCACAGAGGCTAAACAATTGGACTGAAGAGATAGCTCTGAAAATAGGGGGGATGGGTAAGTTGAAGTTAAAATTATGTTCAGGCTAGTGAGGTTGGAAAAATGCTTTCCAACTAGCAAAAAAACAAAGAGACAGGGGGCTGCAGAGTCGTTTGGTATATAACGTTGTTAAGCATTCAAATAACCTAGTCTGTTTTTATACCTCCTCAACGTTACTCCTGCTATCCATAAAATACTTTTCTTTTCCGCGAAATTTCATTTCTCGAAAAGTTGGAACAAATTGTTGCGACCCCTTTGTCTTGGTTTTCTTTTTGGGTGGAAGTAAAATCTTTGAAGGTTCTTATCTTCCAAAAGGTAGAACCAGGAACCATTTCCAGCTATGGCAGAAGGGATTTGTATGTTATAACTATTGCTTGTGGAAATGAAGGCCAAGGGATTGAGGTGGACGTGGACCCCATTTTTTCCTGTGGTTAAACGTTTGTGTATAATGTTAAAATTAGGAAATGGTTGGAATTCCATTTTTACAAATTGTATACATTATCATTAAATAGAGAATATAAATTTTAGACAAATTACTCAAACCTATACTGGAAATATCTTTAGTTGGCAACTTTCAAGATGTTGAGTGTATAAATAGTTGCTTAATTTTATTTTGTAACAGTACAGAAAGCTGAAATTGTTGCTTCACCGCTAGATATCTTATTTTACTACATTTTATATTGGGCTTTCTTTACTGGCTGGTACTCTCGAGTTACTGAGTAGATGAAATACTTTTATGAAGCAGGAAACTTTAAGGGCTGGAAAATTAAACGAGAGGGTTTTAAAGTTGTTTGTGGCAAGTGGAAAAGATGAAGTTCTTTCGCTCATTGGGGCATTCAATATCCAGCAAATTGTCACCCCTGTTCTTCCTACCAGTAAGAAAAATCTTGATATACCAATATTCTGCTACGCCATTGATTTTGTGGTTGGTTTATCCATTTCTCTTCCTTACGCTGAATATTTGATGCAGGGTGTTCAGAAAAGTTCTAG

mRNA sequence

ATGACAACCCCTCCATCTCTCTTGTCTCTCACTATCCATTCTGCCATCCTTAATCTCTCTTCTATCTCTGATCTCTCTTTTCTCCCTGATCACATCGTCCTCCATCTATTCCTGGAAACTTTAAGGGCTGGAAAATTAAACGAGAGGGTTTTAAAGTTGTTTGTGGCAAGTGGAAAAGATGAAGTTCTTTCGCTCATTGGGGCATTCAATATCCAGCAAATTGTCACCCCTGTTCTTCCTACCAGGTGTTCAGAAAAGTTCTAG

Coding sequence (CDS)

ATGACAACCCCTCCATCTCTCTTGTCTCTCACTATCCATTCTGCCATCCTTAATCTCTCTTCTATCTCTGATCTCTCTTTTCTCCCTGATCACATCGTCCTCCATCTATTCCTGGAAACTTTAAGGGCTGGAAAATTAAACGAGAGGGTTTTAAAGTTGTTTGTGGCAAGTGGAAAAGATGAAGTTCTTTCGCTCATTGGGGCATTCAATATCCAGCAAATTGTCACCCCTGTTCTTCCTACCAGGTGTTCAGAAAAGTTCTAG

Protein sequence

MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKDEVLSLIGAFNIQQIVTPVLPTRCSEKF

Homology

[Close]

BLAST of Pay0021374 vs. ExPASy TrEMBL
Match: A0A0A0KVY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605100 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETL+AGKLNERVLKLFVASGKD
Sbjct: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLKAGKLNERVLKLFVASGKD 60

Query: 61 EVLSLIGAFNIQQIVTPVLPTRCSEKF 88
          EVLSLIG F IQQIVTPVLPTRCSEKF
Sbjct: 61 EVLSLIGEFKIQQIVTPVLPTRCSEKF 87

[Close]

BLAST of Pay0021374 vs. ExPASy TrEMBL
Match: A0A6J1C7X9 (uncharacterized protein LOC111008243 OS=Momordica charantia OX=3673 GN=LOC111008243 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.1e-34
Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MT PPSLLSLTIHSAILNLSSISDLSFLPDHIVL LFL+TLRAGKLNERVL+LFVA+G D
Sbjct: 1  MTPPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGND 60

Query: 61 EVLSLIGAFNIQQIVTPVLPTRCSEKF 88
          EVLSLI AFNIQQIVTPVLPTRCSEKF
Sbjct: 61 EVLSLIEAFNIQQIVTPVLPTRCSEKF 87

[Close]

BLAST of Pay0021374 vs. ExPASy TrEMBL
Match: A0A1S4DX21 (probable UDP-arabinopyranose mutase 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489119 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.1e-34
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD
Sbjct: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60

Query: 61 EVLSLIGAFNIQQIVTPVLPT 82
          EVLSLIGAFNIQQIVTPVLPT
Sbjct: 61 EVLSLIGAFNIQQIVTPVLPT 81

[Close]

BLAST of Pay0021374 vs. ExPASy TrEMBL
Match: A0A6J1J1W3 (probable UDP-arabinopyranose mutase 5 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482658 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.1e-30
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL LFLETLRAGKLNERVLKLFVA+GKD
Sbjct: 1  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKD 60

Query: 61 EVLSLIGAFNIQQIVTPVLPT 82
          EVLSLI AFNIQQIVTPVLPT
Sbjct: 61 EVLSLIEAFNIQQIVTPVLPT 81

[Close]

BLAST of Pay0021374 vs. ExPASy TrEMBL
Match: A0A6J1EMJ2 (probable UDP-arabinopyranose mutase 5 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435949 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.1e-30
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL LFLETLRAGKLNERVLKLFVA+GKD
Sbjct: 1  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKD 60

Query: 61 EVLSLIGAFNIQQIVTPVLPT 82
          EVLSLI AFNIQQIVTPVLPT
Sbjct: 61 EVLSLIEAFNIQQIVTPVLPT 81

[Close]

BLAST of Pay0021374 vs. NCBI nr
Match: KGN51916.1 (hypothetical protein Csa_009430 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 3.5e-36
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETL+AGKLNERVLKLFVASGKD
Sbjct: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLKAGKLNERVLKLFVASGKD 60

Query: 61 EVLSLIGAFNIQQIVTPVLPTRCSEKF 88
          EVLSLIG F IQQIVTPVLPTRCSEKF
Sbjct: 61 EVLSLIGEFKIQQIVTPVLPTRCSEKF 87

[Close]

BLAST of Pay0021374 vs. NCBI nr
Match: KAG6577325.1 (hypothetical protein SDJN03_24899, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.1 bits (388), Expect = 5.7e-34
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL LFLETLRAGKLNERVLKLFVA+GKD
Sbjct: 1  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKD 60

Query: 61 EVLSLIGAFNIQQIVTPVLPTRCSEKF 88
          EVLSLI AFNIQQIVTPVLPTRCSEKF
Sbjct: 61 EVLSLIEAFNIQQIVTPVLPTRCSEKF 87

[Close]

BLAST of Pay0021374 vs. NCBI nr
Match: XP_016900275.1 (PREDICTED: probable UDP-arabinopyranose mutase 5 isoform X2 [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD
Sbjct: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60

Query: 61 EVLSLIGAFNIQQIVTPVLPT 82
          EVLSLIGAFNIQQIVTPVLPT
Sbjct: 61 EVLSLIGAFNIQQIVTPVLPT 81

[Close]

BLAST of Pay0021374 vs. NCBI nr
Match: XP_022136568.1 (uncharacterized protein LOC111008243 [Momordica charantia])

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MT PPSLLSLTIHSAILNLSSISDLSFLPDHIVL LFL+TLRAGKLNERVL+LFVA+G D
Sbjct: 1  MTPPPSLLSLTIHSAILNLSSISDLSFLPDHIVLELFLQTLRAGKLNERVLRLFVATGND 60

Query: 61 EVLSLIGAFNIQQIVTPVLPTRCSEKF 88
          EVLSLI AFNIQQIVTPVLPTRCSEKF
Sbjct: 61 EVLSLIEAFNIQQIVTPVLPTRCSEKF 87

[Close]

BLAST of Pay0021374 vs. NCBI nr
Match: XP_038904960.1 (uncharacterized protein LOC120091153 isoform X2 [Benincasa hispida])

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-33
Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 1  MTTPPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKD 60
          MTTPPSLLSLTIHSAI NLS ISDLSFLPDHIVL LFLETLRAGKLNER+LKLFVASGKD
Sbjct: 1  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHIVLDLFLETLRAGKLNERILKLFVASGKD 60

Query: 61 EVLSLIGAFNIQQIVTPVLPTRCSEKF 88
          EVL LI AFNIQQ+VTPVLPTRCSEKF
Sbjct: 61 EVLLLIEAFNIQQVVTPVLPTRCSEKF 87

[Close]

BLAST of Pay0021374 vs. TAIR 10
Match: AT4G30390.1 (unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-26
Identity = 58/84 (69.05%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 4  PPSLLSLTIHSAILNLSSISDLSFLPDHIVLHLFLETLRAGKLNERVLKLFVASGKDEVL 63
          PPSLLSLT+++A+LN+S I+DLS LPDHIVL LF  TL AGKLNERVL+LF+ASG +EVL
Sbjct: 5  PPSLLSLTVNAAVLNISRINDLSHLPDHIVLDLFARTLEAGKLNERVLRLFMASGNEEVL 64

Query: 64 SLIGAFNIQQIVTPVLPTRCSEKF 88
          S+I A  I+  V+P+LPTRC EKF
Sbjct: 65 SVIDALKIKINVSPILPTRCDEKF 88

The following BLAST results are available for this feature:

BLAST of Pay0021374 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0021374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVY4	1.7e-36	96.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G605100 PE=4 SV=1	[more]
A0A6J1C7X9	6.1e-34	91.95	uncharacterized protein LOC111008243 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A1S4DX21	6.1e-34	100.00	probable UDP-arabinopyranose mutase 5 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1J1W3	4.1e-30	92.59	probable UDP-arabinopyranose mutase 5 isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1EMJ2	4.1e-30	92.59	probable UDP-arabinopyranose mutase 5 isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Pay0021374 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51916.1	3.5e-36	96.55	hypothetical protein Csa_009430 [Cucumis sativus]	[more]
KAG6577325.1	5.7e-34	93.10	hypothetical protein SDJN03_24899, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_016900275.1	1.3e-33	100.00	PREDICTED: probable UDP-arabinopyranose mutase 5 isoform X2 [Cucumis melo]	[more]
XP_022136568.1	1.3e-33	91.95	uncharacterized protein LOC111008243 [Momordica charantia]	[more]
XP_038904960.1	1.6e-33	91.95	uncharacterized protein LOC120091153 isoform X2 [Benincasa hispida]	[more]

BLAST of Pay0021374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30390.1	1.2e-26	69.05	unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; Bac...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021374.1	Pay0021374.1	mRNA