Pay0021326 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021326
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Protein disulfide-isomerase
Location	chr09: 6590771 .. 6593840 (-)
RNA-Seq Expression	Pay0021326
Synteny	Pay0021326

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGCAATGTTTTCCGTTTTGTATATTTTCTGGTAGCCTTTTGTGAGTGTCGAACTTCTTTATCATTTAGAGTTTATAATTCTCAAATGATAATTTCATTAAAGTTAACTTATTTCACATATGTAATCTACAACTGCAAAACATAGTGTCAAAAACAAGTTGGTGCAAACGAGCAGGTTAGTTTCAAGAACAGCTTCAACATAGTCAGTAGTCTCTTAACAGTTCATTCATTATTTTATCTTATAATTTTTATTAATGGGTGAGCATTTCATTAGTTTATTTGTGCTGGTAGTCATCTTTATCTCAAGGATATTAAAATATGAAACAAGCATTTCATTTACAATTACATATTTACATATGCTTGTTTCATATTTTAATACCGTCTAAACAAGCATTTCACTGGTTGTTATTATTTCAAAAACTAGTAAAGGTCAGCTAGAGAACCCCAACTTCAATCAAAGGATAGGGAGAGAAGAGTAAGAGCATAATTATTTTAAATCTACAAGGATCTAATATGTATTGACCTTTTTTTTCTTTAAGTTTACAATGACCGAGCACTTTTGTGGACTTATCCTTCATGTTTTTACTCCTTGTATATGTTTGGAATTTTCATATTTGGAATTTAGAATGTAACTTTTATGATGTAATAGGTTTTTGAACTCAAATGGCATCGTTCTAGCTGAGTTCTTTGCACAAGCCCTCACGATTGTATGGAAGAAAGTGGCTACCATTTTCAAAGGAGTTGTAACAGTAGCAGCACTTTATCCAAAAGCACACAAGTCACTTGCTCAGGTTCACTATTAATATTTCAAGCTGTCCTTTTTCCCCTTTAAGATTTCCCTTCTTCCATCAATAAACTTCCATTGCAAATTTACAATTGGTAATTACAATGATATTTGAAACTGAAATTAAAGAATTAACCACATGGCTGATAAAGGTTTATTTGATCATACTTCTCCTTTTTAACAGGCTCTTTTCCTTTTGGAGTGTTATGGAGTACGAAGAACATGAAAAATGAGCTTGGAGTGTTGATTTTTCACATTTTGAACCTTCCATGCTTGTATCAAGCAATGATGATCGTAAGGTATTTGACTGAAGCATACACTATCTTGAGTTGATGTAGATTATTGATTCAAAATTAGATTTGTGATTGATGCTCATAAGTGAGGATTAACTACCAATTCTTTAATTTCTGCATTGTAATTTTTTTCATCATTTTCAATGGTTAGATTTGACTTGTCAACTTTGGCAATTGGAAAATGCTATCCTTTGTTGAGTCATATTTGTAAATTAGGCAATATAATTTTGGATCCATATTGAAATTGCTAGTACCACATGATTTGTAGAAATTGTCCAATATAATGGTGTATTACTCAAGTTTGGGTCAAAGGGTTAATAGTTTGTTAGTTGTGGGTGGTTTTTTCTTGAACAAGTTCTTCTTCTGTTTACTAACTTCAAGTTACAAGTTACAACATTACTAACTTCAAGTTAATATTTTTCGTAGAGTTGTCTTGTTAGAATTCTAAAGATTAAATGGTTTACTTGGATATTGTTTGTAGAATGATTAAGTCATATTGGGTTGAAAGCTAAGCGATTGTGAAGATGGCCAAGCGACCGTTGAATGTTAAAGACTGAGAAGGCGTTTAGGATTTTTAATTATTTAAGTCTTGTATTATGATCTTTTTTCATGTACTATTGTAGAATGTATATACAAACACAATAAGATTTCATTTTGTGTATACAAATGTAAAAGAAAAATATTATAGTTTCTAAAATAATATTAATTTTATTGATTTGTTGACGTGAGAAAAATATTTATCTACACGGATTCAATGTCGGTCTATAAAAAATGGACAATAATGCAACAATTAAATAGAAATAAATTTGTAAAAAGGGACCCAAAAACTAGGCTTTAATGTCAGTTTAAACAGACATTATTGGGGATCTATAATGTCAGTTATAAACCGACATTGTTTGCCTCTATCATGTCGGTTTTAAACTGACACCAAAGTCCAACCGACATTAAAGGGCTTCAATAACACTGTCAAAGATGTCGGTTGAAAACTGACATTAAAGGCCTTTGATGTCGGTCTTAAACCGACATTAAAGAGGTCTTTATTGTCATTTTTAAACCGACATTAAACACCTTTAATAACACAAGCAAAGATGGCGGTTACCAACTTACATTAAAGTCTTTTAATGTCGGTTTTAAACCGACATTAAAGGCTCGATTTCTTGTAGTGTTGGTAATCTGTTCATATTGTACTGCTTCTTCCATAGATTAAAATTACTGCAAACTTTATATGAATCACATTATTGTTTCAGGTTGGCGTAAGAAATCTGAAAGTTGTAGGCAGCGAAGGTTGGGCCCTTGTTCAAGAAGGAGAAGTAGAGAAGCAGAGAAGCAGAGAAGCAGGTTTTCTCTATGAACAATCTTTTTGTCGATTACAAGTACAAATTTTTATTTAATTCTGTATTTGTGACTCTTTAAATCATGCAGAAGCAATATGCTTCACTTGTGTGGACATCTCGCCCACTCGAGGATGATGCTTTTTTATCACTATCATCACTCAAAGACTTGGTCAGAAGTTTAGCAAGCTTGATGCTTTGAATTCATAGCTTATTATTGATGTGTTACATTTTAGAACTATGCTTATGAAATCTTCATGAATAAATAAGAATTTAGTTAACATCAATCCTAATAGAAGTATGTGCTAGTGCATGTCATTCAGTGCATCTATTTGGATTTACACAATAAATTGCTCAACTGATAAATTGATATTTGTAATAATGTTGTTGTTTAATCCGTTGGGTTTTCATCCAAGATTCTCTTTTGTATTGAATTGCCTACAGTTTGCTTTATGCTTGAAAAGGATTCTGCTATTGTCCAAATTTCCTTATGCATGATCATCCTTCTTTCAGTGAAGTTTACATTAGAGCATCTTTAAAGAGACGTCCATTTACCATAAGAGAGGTCAAAGCGTCATATATTGGTTACATTAGAGCATCTTCAAAGGGTCCTCAACTTTTTTTTTTTTGTTTATTTTTTTTTTGTAGGGTTTTAA

mRNA sequence

ATGGTGTTGCAATGTTTTCCGTTTTGTATATTTTCTGGTAGCCTTTTGTTTTTGAACTCAAATGGCATCGTTCTAGCTGAGTTCTTTGCACAAGCCCTCACGATTGTATGGAAGAAAGTGGCTACCATTTTCAAAGGAGTTGTAACAGTAGCAGCACTTTATCCAAAAGCACACAAGTCACTTGCTCAGGTTGGCGTAAGAAATCTGAAAGTTGTAGGCAGCGAAGGTTGGGCCCTTGTTCAAGAAGGAGAAGTAGAGAAGCAGAGAAGCAGAGAAGCAGGGTTTTAA

Coding sequence (CDS)

ATGGTGTTGCAATGTTTTCCGTTTTGTATATTTTCTGGTAGCCTTTTGTTTTTGAACTCAAATGGCATCGTTCTAGCTGAGTTCTTTGCACAAGCCCTCACGATTGTATGGAAGAAAGTGGCTACCATTTTCAAAGGAGTTGTAACAGTAGCAGCACTTTATCCAAAAGCACACAAGTCACTTGCTCAGGTTGGCGTAAGAAATCTGAAAGTTGTAGGCAGCGAAGGTTGGGCCCTTGTTCAAGAAGGAGAAGTAGAGAAGCAGAGAAGCAGAGAAGCAGGGTTTTAA

Protein sequence

MVLQCFPFCIFSGSLLFLNSNGIVLAEFFAQALTIVWKKVATIFKGVVTVAALYPKAHKSLAQVGVRNLKVVGSEGWALVQEGEVEKQRSREAGF

Homology

[Close]

BLAST of Pay0021326 vs. ExPASy Swiss-Prot
Match: Q67UF5 (Protein disulfide isomerase-like 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PDIL2-3 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-07
Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNG+VL EFFA      Q LT +W+K A + KGV TVAAL   AHK LAQ  G+R   
Sbjct: 44  LNSNGVVLVEFFAPWCGHCQQLTPIWEKAAGVLKGVATVAALDADAHKELAQEYGIRGFP 103

[Close]

BLAST of Pay0021326 vs. ExPASy Swiss-Prot
Match: Q9MAU6 (Protein disulfide-isomerase like 2-2 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-2 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-07
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNG+VL EFFA      Q+LT  W+KVA+  KG+ TVAA+   AHKS++Q  GVR   
Sbjct: 47  LNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFP 106

[Close]

BLAST of Pay0021326 vs. ExPASy Swiss-Prot
Match: O48773 (Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-3 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.7e-07
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 18 LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ 64
          LNSNG+VL EFFA      +ALT  W+KVA I KGV TVAA+   AH+S AQ
Sbjct: 45 LNSNGVVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQ 96

[Close]

BLAST of Pay0021326 vs. ExPASy TrEMBL
Match: A0A6J1I3T1 (Protein disulfide-isomerase OS=Cucurbita maxima OX=3661 GN=LOC111469655 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNGIVL EFFA      QALT VW+K AT+ KGVVTVAAL   AHKSLAQ  G+R   
Sbjct: 46  LNSNGIVLVEFFAPWCGHCQALTPVWEKAATVLKGVVTVAALDADAHKSLAQEYGIRGFP 105

[Close]

BLAST of Pay0021326 vs. ExPASy TrEMBL
Match: A0A6J1G6L2 (Protein disulfide-isomerase OS=Cucurbita moschata OX=3662 GN=LOC111451254 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNGIVL EFFA      QALT VW+K AT+ KGVVTVAAL   AHKSLAQ  G+R   
Sbjct: 46  LNSNGIVLVEFFAPWCGHCQALTPVWEKAATVLKGVVTVAALDADAHKSLAQEYGIRGFP 105

[Close]

BLAST of Pay0021326 vs. ExPASy TrEMBL
Match: A0A6J1JF50 (Protein disulfide-isomerase OS=Cucurbita maxima OX=3661 GN=LOC111483851 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-07
Identity = 38/62 (61.29%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNGIVL EFFA      QALT VW+K AT+ KGV TVAAL   AHKSLAQ  G+R   
Sbjct: 46  LNSNGIVLVEFFAPWCGHCQALTPVWEKAATVLKGVATVAALDADAHKSLAQEYGIRGFP 105

[Close]

BLAST of Pay0021326 vs. ExPASy TrEMBL
Match: A0A6J1FWT2 (Protein disulfide-isomerase OS=Cucurbita moschata OX=3662 GN=LOC111448940 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-07
Identity = 38/62 (61.29%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNGIVL EFFA      QALT VW+K AT+ KGV TVAAL   AHKSLAQ  G+R   
Sbjct: 46  LNSNGIVLVEFFAPWCGHCQALTPVWEKAATVLKGVATVAALDADAHKSLAQEYGIRGFP 105

[Close]

BLAST of Pay0021326 vs. ExPASy TrEMBL
Match: A0A5A7UJV0 (Protein disulfide-isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002750 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.1e-07
Identity = 37/52 (71.15%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 18 LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ 64
          LNSNGIVL EFFA      QALT VW+K ATI KGV TVAAL   AHKSLAQ
Sbjct: 46 LNSNGIVLVEFFAPWCGHCQALTPVWEKAATILKGVATVAALDADAHKSLAQ 97

[Close]

BLAST of Pay0021326 vs. NCBI nr
Match: XP_028548750.1 (protein disulfide isomerase-like 2-3 [Dendrobium catenatum])

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-07
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQVGVRNLKV 74
           LNSNGIVL EFFA      QALT +W+K AT+ KGV TVAAL   AHKSLAQV +++ K+
Sbjct: 42  LNSNGIVLVEFFAPWCGHCQALTPIWEKAATVLKGVATVAALDADAHKSLAQVLLQSKKL 101

[Close]

BLAST of Pay0021326 vs. NCBI nr
Match: XP_022947369.1 (protein disulfide isomerase-like 2-3 [Cucurbita moschata] >KAG6604745.1 Protein disulfide-isomerase like 2-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034873.1 Protein disulfide-isomerase like 2-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-07
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNGIVL EFFA      QALT VW+K AT+ KGVVTVAAL   AHKSLAQ  G+R   
Sbjct: 46  LNSNGIVLVEFFAPWCGHCQALTPVWEKAATVLKGVVTVAALDADAHKSLAQEYGIRGFP 105

[Close]

BLAST of Pay0021326 vs. NCBI nr
Match: XP_022970765.1 (protein disulfide isomerase-like 2-3 [Cucurbita maxima])

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-07
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNGIVL EFFA      QALT VW+K AT+ KGVVTVAAL   AHKSLAQ  G+R   
Sbjct: 46  LNSNGIVLVEFFAPWCGHCQALTPVWEKAATVLKGVVTVAALDADAHKSLAQEYGIRGFP 105

[Close]

BLAST of Pay0021326 vs. NCBI nr
Match: XP_023534246.1 (protein disulfide isomerase-like 2-3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNGIVL EFFA      Q+LT VW+K AT+ KGVVTVAAL   AHKSLAQ  G+R   
Sbjct: 46  LNSNGIVLVEFFAPWCGHCQSLTPVWEKAATVLKGVVTVAALDADAHKSLAQEYGIRGFP 105

[Close]

BLAST of Pay0021326 vs. NCBI nr
Match: KAG6570554.1 (Protein disulfide isomerase-like 2-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 38/62 (61.29%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNGIVL EFFA      QALT VW+K AT+ KGV TVAAL   AHKSLAQ  G+R   
Sbjct: 46  LNSNGIVLVEFFAPWCGHCQALTPVWEKAATVLKGVATVAALDADAHKSLAQEYGIRGFP 105

[Close]

BLAST of Pay0021326 vs. TAIR 10
Match: AT1G04980.1 (PDI-like 2-2 )

HSP 1 Score: 55.5 bits (132), Expect = 2.8e-08
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 18  LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ-VGVRNLK 73
           LNSNG+VL EFFA      Q+LT  W+KVA+  KG+ TVAA+   AHKS++Q  GVR   
Sbjct: 47  LNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFP 106

[Close]

BLAST of Pay0021326 vs. TAIR 10
Match: AT2G32920.1 (PDI-like 2-3 )

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-08
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 18 LNSNGIVLAEFFA------QALTIVWKKVATIFKGVVTVAALYPKAHKSLAQ 64
          LNSNG+VL EFFA      +ALT  W+KVA I KGV TVAA+   AH+S AQ
Sbjct: 45 LNSNGVVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQ 96

The following BLAST results are available for this feature:

BLAST of Pay0021326 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67UF5	2.3e-07	53.23	Protein disulfide isomerase-like 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q9MAU6	3.9e-07	51.61	Protein disulfide-isomerase like 2-2 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-2 ...	[more]
O48773	6.7e-07	59.62	Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-3 PE=2 ...	[more]

BLAST of Pay0021326 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3T1	2.4e-07	62.90	Protein disulfide-isomerase OS=Cucurbita maxima OX=3661 GN=LOC111469655 PE=3 SV=...	[more]
A0A6J1G6L2	2.4e-07	62.90	Protein disulfide-isomerase OS=Cucurbita moschata OX=3662 GN=LOC111451254 PE=3 S...	[more]
A0A6J1JF50	6.9e-07	61.29	Protein disulfide-isomerase OS=Cucurbita maxima OX=3661 GN=LOC111483851 PE=3 SV=...	[more]
A0A6J1FWT2	6.9e-07	61.29	Protein disulfide-isomerase OS=Cucurbita moschata OX=3662 GN=LOC111448940 PE=3 S...	[more]
A0A5A7UJV0	9.1e-07	71.15	Protein disulfide-isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of Pay0021326 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_028548750.1	1.7e-07	61.29	protein disulfide isomerase-like 2-3 [Dendrobium catenatum]	[more]
XP_022947369.1	4.9e-07	62.90	protein disulfide isomerase-like 2-3 [Cucurbita moschata] >KAG6604745.1 Protein ...	[more]
XP_022970765.1	4.9e-07	62.90	protein disulfide isomerase-like 2-3 [Cucurbita maxima]	[more]
XP_023534246.1	1.1e-06	61.29	protein disulfide isomerase-like 2-3 [Cucurbita pepo subsp. pepo]	[more]
KAG6570554.1	1.4e-06	61.29	Protein disulfide isomerase-like 2-3, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Pay0021326 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04980.1	2.8e-08	51.61	PDI-like 2-2	[more]
AT2G32920.1	4.8e-08	59.62	PDI-like 2-3	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021326.1	Pay0021326.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0016853	isomerase activity