Pay0021285 (gene) Melon (Payzawat) v1

Overview


Name	Pay0021285
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Ribonuclease H
Location	chr01: 17548534 .. 17549100 (+)
RNA-Seq Expression	Pay0021285
Synteny	Pay0021285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATATAACTGCTACAAATTGCATTTTCTTTACAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGTGTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAGCCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAATTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

mRNA sequence

ATGGAAAATATAACTGCTACAAATTGCATTTTCTTTACAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGTGTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAGCCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAATTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

Coding sequence (CDS)

ATGGAAAATATAACTGCTACAAATTGCATTTTCTTTACAGATAAAGAAATTCCCCCTAAAGGTACTGGACATACTAAGACATTGCACATATCCGTGAAGTGTAAGGACCATCATGTGGCGAGGGTCCTGGTAGATAATGGTTCATCTTTAAATATAATATCGAGATCCACGTTGATGAAACTCCTCATAGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAACAGCCTTTGACGGTGCACGTAGAGAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAACGTTTCATTCCAAGTGATGGATGTAAATTCCTCATACAATTTTCTACTGGGACAACCTTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTGCACCAAAGGTTGAAATTTAGTATAGAAGGTGGTCAAGCTATTGTCTATGGAGAAGACGACATGTTTGTAACGAAAACATCGGCACTTCCTTATGTTGAAGCAATAGAGGAAGCTCTAGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATCTTTCCAACATAA

Protein sequence

MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT

Homology

[Close]

BLAST of Pay0021285 vs. ExPASy TrEMBL
Match: A0A5A7TUT4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001540 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.6e-92
Identity = 169/188 (89.89%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 1   MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMK 60
           +ENITATNCI FTD+EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMK
Sbjct: 547 VENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMK 606

Query: 61  LLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQP 120
           L IDPSYLRPSTMVV AFDGARREVI DIDIPLKIGPSTFN+SFQVMD+NSSY+ LLG+P
Sbjct: 607 LPIDPSYLRPSTMVVRAFDGARREVIEDIDIPLKIGPSTFNISFQVMDINSSYSCLLGRP 666

Query: 121 WIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEI 180
           WIHS GAVPSSLHQRLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFEI
Sbjct: 667 WIHSVGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEI 726

Query: 181 ANATIFPT 189
           ANATIFPT
Sbjct: 727 ANATIFPT 734

[Close]

BLAST of Pay0021285 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.8e-92
Identity = 170/188 (90.43%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 1   MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMK 60
           +ENI ATNCI FTD+EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMK
Sbjct: 793 VENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMK 852

Query: 61  LLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQP 120
           L IDPSYLRPSTMVV AFDGARREVIGDIDIPLKIGPSTFNVSFQVMD+NSSY+ LLG+P
Sbjct: 853 LPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRP 912

Query: 121 WIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEI 180
           WIHSAGAVPSSLHQRLKFS+E GQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFEI
Sbjct: 913 WIHSAGAVPSSLHQRLKFSVECGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEI 972

Query: 181 ANATIFPT 189
           ANATIFPT
Sbjct: 973 ANATIFPT 980

[Close]

BLAST of Pay0021285 vs. ExPASy TrEMBL
Match: A0A5A7TI68 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00990 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 166/187 (88.77%), Postives = 174/187 (93.05%), Query Frame = 0


Query: 1   MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMK 60
           +ENITAT+CI FTD+EIPPKGTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMK
Sbjct: 165 VENITATHCISFTDEEIPPKGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMK 224

Query: 61  LLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQP 120
           L IDPSYLR S MVV AFDGARREVI DIDIPLKIGPSTFNVS QVMDVNSSY+ LLG+P
Sbjct: 225 LPIDPSYLRSSIMVVRAFDGARREVIRDIDIPLKIGPSTFNVSVQVMDVNSSYSCLLGRP 284

Query: 121 WIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEI 180
           WIHSAGAVPS LHQRLKFS+EGGQAIVYGED+MFVTK S LPYVEA EEALECSYRSFEI
Sbjct: 285 WIHSAGAVPSLLHQRLKFSVEGGQAIVYGEDNMFVTKISTLPYVEATEEALECSYRSFEI 344

Query: 181 ANATIFP 188
           ANATIFP
Sbjct: 345 ANATIFP 351

[Close]

BLAST of Pay0021285 vs. ExPASy TrEMBL
Match: A0A5A7U7X5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001520 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 14  DKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTM 73
           +KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTM
Sbjct: 113 NKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTM 172

Query: 74  VVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLH 133
           VVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLH
Sbjct: 173 VVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLH 232

Query: 134 QRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE 173
           QRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE
Sbjct: 233 QRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE 271

[Close]

BLAST of Pay0021285 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 156/174 (89.66%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 15   KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMV 74
            +EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLRPSTMV
Sbjct: 1265 EEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMV 1324

Query: 75   VTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQ 134
            V AFD A REVIGDIDIPLKIGPSTFNVSFQVMD+NS Y+ LLG+PWIHSAGAVPSSLHQ
Sbjct: 1325 VRAFDSACREVIGDIDIPLKIGPSTFNVSFQVMDINSLYSCLLGRPWIHSAGAVPSSLHQ 1384

Query: 135  RLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT 189
            RLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFE ANATIFPT
Sbjct: 1385 RLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEFANATIFPT 1438

[Close]

BLAST of Pay0021285 vs. NCBI nr
Match: KAA0046608.1 (uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 348.6 bits (893), Expect = 3.4e-92
Identity = 169/188 (89.89%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 1   MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMK 60
           +ENITATNCI FTD+EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMK
Sbjct: 547 VENITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMK 606

Query: 61  LLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQP 120
           L IDPSYLRPSTMVV AFDGARREVI DIDIPLKIGPSTFN+SFQVMD+NSSY+ LLG+P
Sbjct: 607 LPIDPSYLRPSTMVVRAFDGARREVIEDIDIPLKIGPSTFNISFQVMDINSSYSCLLGRP 666

Query: 121 WIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEI 180
           WIHS GAVPSSLHQRLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFEI
Sbjct: 667 WIHSVGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEI 726

Query: 181 ANATIFPT 189
           ANATIFPT
Sbjct: 727 ANATIFPT 734

[Close]

BLAST of Pay0021285 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 347.8 bits (891), Expect = 5.8e-92
Identity = 170/188 (90.43%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 1   MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMK 60
           +ENI ATNCI FTD+EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMK
Sbjct: 793 VENIIATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMK 852

Query: 61  LLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQP 120
           L IDPSYLRPSTMVV AFDGARREVIGDIDIPLKIGPSTFNVSFQVMD+NSSY+ LLG+P
Sbjct: 853 LPIDPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRP 912

Query: 121 WIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEI 180
           WIHSAGAVPSSLHQRLKFS+E GQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFEI
Sbjct: 913 WIHSAGAVPSSLHQRLKFSVECGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEI 972

Query: 181 ANATIFPT 189
           ANATIFPT
Sbjct: 973 ANATIFPT 980

[Close]

BLAST of Pay0021285 vs. NCBI nr
Match: KAA0043020.1 (uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 335.5 bits (859), Expect = 3.0e-88
Identity = 166/187 (88.77%), Postives = 174/187 (93.05%), Query Frame = 0


Query: 1   MENITATNCIFFTDKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMK 60
           +ENITAT+CI FTD+EIPPKGTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMK
Sbjct: 165 VENITATHCISFTDEEIPPKGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMK 224

Query: 61  LLIDPSYLRPSTMVVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQP 120
           L IDPSYLR S MVV AFDGARREVI DIDIPLKIGPSTFNVS QVMDVNSSY+ LLG+P
Sbjct: 225 LPIDPSYLRSSIMVVRAFDGARREVIRDIDIPLKIGPSTFNVSVQVMDVNSSYSCLLGRP 284

Query: 121 WIHSAGAVPSSLHQRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEI 180
           WIHSAGAVPS LHQRLKFS+EGGQAIVYGED+MFVTK S LPYVEA EEALECSYRSFEI
Sbjct: 285 WIHSAGAVPSLLHQRLKFSVEGGQAIVYGEDNMFVTKISTLPYVEATEEALECSYRSFEI 344

Query: 181 ANATIFP 188
           ANATIFP
Sbjct: 345 ANATIFP 351

[Close]

BLAST of Pay0021285 vs. NCBI nr
Match: KAA0049671.1 (uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa] >TYK12201.1 uncharacterized protein E5676_scaffold106G001520 [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 2.2e-83
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 14  DKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTM 73
           +KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTM
Sbjct: 113 NKEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTM 172

Query: 74  VVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLH 133
           VVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLH
Sbjct: 173 VVTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLH 232

Query: 134 QRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE 173
           QRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE
Sbjct: 233 QRLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALE 271

[Close]

BLAST of Pay0021285 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.9e-83
Identity = 156/174 (89.66%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 15   KEIPPKGTGHTKTLHISVKCKDHHVARVLVDNGSSLNIISRSTLMKLLIDPSYLRPSTMV 74
            +EIPP+GTGHTK LHISVKCKDHHVARVLVDNGSSLNI+SRSTLMKL IDPSYLRPSTMV
Sbjct: 1265 EEIPPEGTGHTKALHISVKCKDHHVARVLVDNGSSLNIMSRSTLMKLPIDPSYLRPSTMV 1324

Query: 75   VTAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDVNSSYNFLLGQPWIHSAGAVPSSLHQ 134
            V AFD A REVIGDIDIPLKIGPSTFNVSFQVMD+NS Y+ LLG+PWIHSAGAVPSSLHQ
Sbjct: 1325 VRAFDSACREVIGDIDIPLKIGPSTFNVSFQVMDINSLYSCLLGRPWIHSAGAVPSSLHQ 1384

Query: 135  RLKFSIEGGQAIVYGEDDMFVTKTSALPYVEAIEEALECSYRSFEIANATIFPT 189
            RLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALECSYRSFE ANATIFPT
Sbjct: 1385 RLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEFANATIFPT 1438

The following BLAST results are available for this feature:

BLAST of Pay0021285 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0021285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TUT4	1.6e-92	89.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V681	2.8e-92	90.43	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TI68	1.4e-88	88.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U7X5	1.1e-83	99.37	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00152...	[more]
A0A5A7SUT0	1.4e-83	89.66	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]

BLAST of Pay0021285 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046608.1	3.4e-92	89.89	uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa]	[more]
KAA0061241.1	5.8e-92	90.43	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
KAA0043020.1	3.0e-88	88.77	uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa]	[more]
KAA0049671.1	2.2e-83	99.37	uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa] >TYK12...	[more]
KAA0033221.1	2.9e-83	89.66	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]

BLAST of Pay0021285 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 13..144 e-value: 1.3E-17 score: 65.8
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 37..126
None	No IPR available	PFAM	PF13650	Asp_protease_2	coord: 32..121 e-value: 2.9E-6 score: 27.9
None	No IPR available	PANTHER	PTHR33240:SF7	GAG-PRO-LIKE PROTEIN	coord: 2..181
None	No IPR available	PANTHER	PTHR33240	OS08G0508500 PROTEIN	coord: 2..181
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 32..123 e-value: 1.77422E-18 score: 74.2952

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0021285.1	Pay0021285.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity