
Pay0021079 (gene) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCCAAATCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGTTCGTCAAATTGCATTTTTTCTCCTTATTTCCCTTCAAACAATCCTCAAAGATTCGCCATTGTTCATAGAATCTACGGTGCTAGTAATGTTGCTAAATTCCTTCAAGTGAGTATATTATTTTATTTATTTGAACAAATAATTAAATTATAACCTAAATTAAAAATCTTTGAGACTCTTTTGGGTTAATTTAATATAATCAGCAAGTTCCTATGGATGTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTCAGATTGCTCTCCTCGCTTCCAACCTTCAACAAGCCCAACACGAAGCCCAAGCTTTTGCCTTTGATGACCCCAGCTCAGGCCCAATTTGTATTGGGCTCTCCACTCCAGCCCATTGGCTTCATTCTAGCTTTTCCGATTCATAA ATGATTCCAAATCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGTTCGTCAAATTGCATTTTTTCTCCTTATTTCCCTTCAAACAATCCTCAAAGATTCGCCATTGTTCATAGAATCTACGGTGCTAGTAATGTTGCTAAATTCCTTCAACAAGTTCCTATGGATGTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTCAGATTGCTCTCCTCGCTTCCAACCTTCAACAAGCCCAACACGAAGCCCAAGCTTTTGCCTTTGATGACCCCAGCTCAGGCCCAATTTGTATTGGGCTCTCCACTCCAGCCCATTGGCTTCATTCTAGCTTTTCCGATTCATAA ATGATTCCAAATCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGTTCGTCAAATTGCATTTTTTCTCCTTATTTCCCTTCAAACAATCCTCAAAGATTCGCCATTGTTCATAGAATCTACGGTGCTAGTAATGTTGCTAAATTCCTTCAACAAGTTCCTATGGATGTACGAGGTGAAGCAGCAGAAACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCTCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTCAGATTGCTCTCCTCGCTTCCAACCTTCAACAAGCCCAACACGAAGCCCAAGCTTTTGCCTTTGATGACCCCAGCTCAGGCCCAATTTGTATTGGGCTCTCCACTCCAGCCCATTGGCTTCATTCTAGCTTTTCCGATTCATAA MIPNRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDVRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAQIALLASNLQQAQHEAQAFAFDDPSSGPICIGLSTPAHWLHSSFSDS Homology
BLAST of Pay0021079 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 3.0e-38 Identity = 71/117 (60.68%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.5e-37 Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.3e-30 Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 126.3 bits (316), Expect = 2.9e-28 Identity = 54/100 (54.00%), Postives = 77/100 (77.00%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.6e-26 Identity = 49/101 (48.51%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.5e-68 Identity = 132/147 (89.80%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.7e-55 Identity = 111/147 (75.51%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54 Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54 Identity = 112/150 (74.67%), Postives = 126/150 (84.00%), Query Frame = 0
BLAST of Pay0021079 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.0e-53 Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 0
BLAST of Pay0021079 vs. NCBI nr
Match: XP_022923144.1 (LOB domain-containing protein 24-like [Cucurbita moschata]) HSP 1 Score: 224.2 bits (570), Expect = 7.7e-55 Identity = 111/147 (75.51%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of Pay0021079 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 223.4 bits (568), Expect = 1.3e-54 Identity = 114/150 (76.00%), Postives = 126/150 (84.00%), Query Frame = 0
BLAST of Pay0021079 vs. NCBI nr
Match: XP_008439169.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]) HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54 Identity = 112/152 (73.68%), Postives = 126/152 (82.89%), Query Frame = 0
BLAST of Pay0021079 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.5 bits (563), Expect = 5.0e-54 Identity = 110/147 (74.83%), Postives = 126/147 (85.71%), Query Frame = 0
BLAST of Pay0021079 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima]) HSP 1 Score: 221.5 bits (563), Expect = 5.0e-54 Identity = 112/150 (74.67%), Postives = 126/150 (84.00%), Query Frame = 0
BLAST of Pay0021079 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 ) HSP 1 Score: 159.5 bits (402), Expect = 2.2e-39 Identity = 71/117 (60.68%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Pay0021079 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 ) HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38 Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 0
BLAST of Pay0021079 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 ) HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31 Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = 0
BLAST of Pay0021079 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 126.3 bits (316), Expect = 2.0e-29 Identity = 54/100 (54.00%), Postives = 77/100 (77.00%), Query Frame = 0
BLAST of Pay0021079 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 ) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 49/101 (48.51%), Postives = 74/101 (73.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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